ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37d06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ344223.2|HVU344223 Hordeum vulgare mRNA for RACB protein (RacB gene) Length = 630 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Minus Query: 366 cttcgcccttgttctttgtctaccgattgattagatcacaagatggagcaagcccccctc 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 cttcgcccttgttctttgtctaccgattgattagatcacaagatggagcaagcccccctc 571 Query: 426 tgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatca 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatca 511 Query: 486 aatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtagggtgcgcct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 aatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtagggtgcgcct 451 Query: 546 attaacttttttagttcctccccctgagcagtagtgataggaacagcaccaggatggtcc 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 attaacttttttagttcctccccctgagcagtagtgataggaacagcaccaggatggtcc 391 Query: 606 acaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcaca 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 acaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcaca 331 Query: 666 cctggtgcataatgcttca 684 ||||||||||||||||||| Sbjct: 330 cctggtgcataatgcttca 312
>ref|XM_506691.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.17 mRNA Length = 1387 Score = 404 bits (204), Expect = e-109 Identities = 270/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1032 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 973 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 972 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 913 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 912 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 853 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 852 gcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctcgaaga 793 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 792 tcaagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 741 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1280 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 1225 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 1224 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 1166 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 1165 ctcgacaaagaggccttgctgcagctgcc 1137 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1341 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 1291 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1101 cgctgaagcaagacgcaacaataataaagcctggc 1067
>ref|XM_463909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1105 Score = 404 bits (204), Expect = e-109 Identities = 270/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 703 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 644 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 643 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 584 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 583 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 524 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 523 gcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctcgaaga 464 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 463 tcaagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 412 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 951 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 896 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 895 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 837 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 836 ctcgacaaagaggccttgctgcagctgcc 808 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1012 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 962 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 772 cgctgaagcaagacgcaacaataataaagcctggc 738
>dbj|AK100842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123F22, full insert sequence Length = 1386 Score = 404 bits (204), Expect = e-109 Identities = 270/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1031 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 972 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 971 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 912 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 911 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 852 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 851 gcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctcgaaga 792 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 791 tcaagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 740 Score = 139 bits (70), Expect = 1e-29 Identities = 108/118 (91%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 146 aagttacctaaattgccacgacttgtcagtcacacgagataatcacaaggcaggaagaag 205 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 1251 aagttacctaa-ttgccacgacttgtcagtcacacgagataatcacaaggcagaaaggag 1193 Query: 206 agaaatcaaacaaatggatcgcccgatgcctcgacaaagagaccttgctgcagctgcc 263 | |||| ||||||| ||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 1192 a-aaatgaaacaaacggatcgctcattgcctcgacaaagaggccttgctgcagctgcc 1136 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1340 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 1290 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1100 cgctgaagcaagacgcaacaataataaagcctggc 1066
>dbj|AK069443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024G13, full insert sequence Length = 1104 Score = 404 bits (204), Expect = e-109 Identities = 270/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 702 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 643 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 642 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 583 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 582 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 523 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 522 gcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctcgaaga 463 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 462 tcaagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 411 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 950 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 895 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 894 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 836 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 835 ctcgacaaagaggccttgctgcagctgcc 807 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1011 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 961 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 771 cgctgaagcaagacgcaacaataataaagcctggc 737
>gb|AF250327.2| Oryza sativa small GTP-binding protein RACBP (RACB) mRNA, complete cds Length = 1124 Score = 396 bits (200), Expect = e-107 Identities = 269/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 759 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 700 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 699 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 640 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 639 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 580 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 579 gcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctcgaaga 520 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 519 tcaagctttgttcccacaaggatgataggaacaccaggtgcataatgcttca 468 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1007 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 952 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 951 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 893 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 892 ctcgacaaagaggccttgctgcagctgcc 864 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1068 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 1018 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 828 cgctgaagcaagacgcaacaataataaagcctggc 794
>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full insert sequence Length = 2977 Score = 396 bits (200), Expect = e-107 Identities = 269/292 (92%) Strand = Plus / Minus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 684 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 625 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 624 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgacgtttagttgggtc 565 Query: 513 ttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttcctccccctga 572 || |||||||||||||||||||| || ||||||||| |||| |||||||||| |||||| Sbjct: 564 tttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttcctctccctga 505 Query: 573 gcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaaga 632 ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 504 gcagtggtgataggaacaacaccaggatggtccacaaaaaactgcttgtcatctcgaaga 445 Query: 633 tcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 444 tcaagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 393 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Minus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 932 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 877 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 876 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 818 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 817 ctcgacaaagaggccttgctgcagctgcc 789 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Minus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 992 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 942 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 753 cgctgaagcaagacgcaacaataataaagcctggc 719
>gb|AF126053.2| Zea mays Rop2 small GTP binding protein mRNA, complete cds Length = 1353 Score = 367 bits (185), Expect = 3e-98 Identities = 292/325 (89%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 361 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 419 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 991 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 933 Query: 420 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 479 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 932 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 873 Query: 480 gcatcaaatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtagggt 539 ||||| || || ||||| || ||||||||||||||||||||||||||||||||||| || Sbjct: 872 gcatcgaagacgcccttcacgtttagttgggtcttcgagctgcattcgatgtagtatgga 813 Query: 540 gcgcctattaacttttttagttcctccccctgagcagtagtgataggaacagcaccagga 599 ||||||||| |||| |||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 812 gcgcctatttgctttcttagctcctctccctgagcagtagtgatagggacagcaccagga 753 Query: 600 tggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataata 659 ||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 752 tggtccacaaagaactgcttgtcgtctcgaagatcaagctttgtccctacgagaataatt 693 Query: 660 ggcacacctggtgcataatgcttca 684 |||||||| |||||||||||||||| Sbjct: 692 ggcacaccaggtgcataatgcttca 668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 235 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 1160 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 1101 Query: 236 tcgacaaagaga 247 |||||||||||| Sbjct: 1100 tcgacaaagaga 1089 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 37 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 90 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 1298 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 1246 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ctcaaacacgggaaataccgtcta 139 ||||||||||||||||||| |||| Sbjct: 1229 ctcaaacacgggaaataccttcta 1206
>gb|AY163377.1| Zea mays putative ROP family GTPase ROP9 mRNA, complete cds Length = 1136 Score = 361 bits (182), Expect = 2e-96 Identities = 293/328 (89%), Gaps = 4/328 (1%) Strand = Plus / Minus Query: 361 ggcaacttcgcccttgtt--ctttgtctaccgat--tgattagatcacaagatggagcaa 416 |||| ||||||||||||| ||||||||| ||| | |||||||||||| |||||||| Sbjct: 772 ggcaccttcgcccttgtttcttttgtctactgatcattattagatcacaaaatggagcac 713 Query: 417 gcccccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttatt 476 ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| Sbjct: 712 gcccccctctgcgcctttttcttcttcttcgccttaggcggctgcagcacaacctttatc 653 Query: 477 gccgcatcaaatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtag 536 |||||||| || |||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 652 gccgcatcgaagacacccttcacgtttagttgggtctttgagctgcactcgatgtagtat 593 Query: 537 ggtgcgcctattaacttttttagttcctccccctgagcagtagtgataggaacagcacca 596 || ||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 592 ggcgcgcctatttgctttcttagctcctctccctgagcagtagtgataggaacagcacca 533 Query: 597 ggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggata 656 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 532 ggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtccctacgagaatt 473 Query: 657 ataggcacacctggtgcataatgcttca 684 || |||||||| |||||||||||||||| Sbjct: 472 attggcacaccaggtgcataatgcttca 445 Score = 63.9 bits (32), Expect = 6e-07 Identities = 73/85 (85%), Gaps = 5/85 (5%) Strand = Plus / Minus Query: 140 ctaagcaagttacctaaattgccacgactt-gtcagtcacacg----agataatcacaag 194 |||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 974 ctaagcgagttacctaaattgccacgacctcgtcagtcacacacaccagataatcacaag 915 Query: 195 gcaggaagaagagaaatcaaacaaa 219 || ||||| || ||||| ||||||| Sbjct: 914 gcgggaaggagggaaatgaaacaaa 890 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/36 (91%), Gaps = 2/36 (5%) Strand = Plus / Minus Query: 52 cgattacatcatgtctctacttatggaaccgagata 87 |||||||||||||||| ||||||||||| |||||| Sbjct: 1067 cgattacatcatgtct--acttatggaacagagata 1034
>gb|AY106325.1| Zea mays PCO091374 mRNA sequence Length = 1451 Score = 359 bits (181), Expect = 8e-96 Identities = 291/325 (89%), Gaps = 2/325 (0%) Strand = Plus / Minus Query: 361 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 419 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 1084 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 1026 Query: 420 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 479 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 1025 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 966 Query: 480 gcatcaaatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtagggt 539 ||||| || |||||||| || |||||||||||||| |||||||| ||||||||||| || Sbjct: 965 gcatcgaagacacccttcacgtttagttgggtctttgagctgcactcgatgtagtatggc 906 Query: 540 gcgcctattaacttttttagttcctccccctgagcagtagtgataggaacagcaccagga 599 ||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 905 gcgcctatttgctttcttagctcctctccctgagcagtagtgataggaacagcaccagga 846 Query: 600 tggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataata 659 ||||||||||||||||||||||| |||||||||||||||||||| || ||||| || || Sbjct: 845 tggtccacaaagaactgcttgtcgtctcgaagatcaagctttgtccctacgagaattatt 786 Query: 660 ggcacacctggtgcataatgcttca 684 |||||||| |||||||||||||||| Sbjct: 785 ggcacaccaggtgcataatgcttca 761 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 235 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 1253 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 1194 Query: 236 tcgacaaagaga 247 |||||||||||| Sbjct: 1193 tcgacaaagaga 1182 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 37 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 90 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 1391 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 1339 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ctcaaacacgggaaataccgtcta 139 ||||||||||||||||||| |||| Sbjct: 1322 ctcaaacacgggaaataccttcta 1299
>gb|BT016448.1| Zea mays clone Contig281 mRNA sequence Length = 873 Score = 323 bits (163), Expect = 4e-85 Identities = 282/319 (88%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 361 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 419 |||| ||||||||||||| ||| |||||||||| ||||||||||||| |||||||| ||| Sbjct: 372 ggcaccttcgcccttgtttcttcgtctaccgat-gattagatcacaaaatggagcacgcc 430 Query: 420 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 479 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| || Sbjct: 431 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgct 490 Query: 480 gcatcaaatacacccttgacatttagttgggtcttcgagctgcattcgatgtagtagggt 539 ||||| || || ||||| || |||||||||||||||||||||||||||||||| || || Sbjct: 491 gcatcgaagacgcccttcacgtttagttgggtcttcgagctgcattcgatgtaatatgga 550 Query: 540 gcgcctattaacttttttagttcctccccctgagcagtagtgataggaacagcaccagga 599 ||||||||| |||| |||| ||||| |||||||||||| ||||||| ||||||||| || Sbjct: 551 gcgcctatttgctttcttagctcctctccctgagcagtactgatagggacagcaccacga 610 Query: 600 tggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataata 659 ||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| Sbjct: 611 tggtccacaaagaactgcttgtcgtctcgaagatcaagctttgtccctacgagaataatt 670 Query: 660 ggcacacctggtgcataat 678 |||||||| ||||||||| Sbjct: 671 ggcacaccacgtgcataat 689 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 176 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 235 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| ||||| Sbjct: 203 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgcttaatgcc 262 Query: 236 tcgacaaagaga 247 |||||||||||| Sbjct: 263 tcgacaaagaga 274 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 37 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 90 |||||||||| ||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 61 aaaataaacttagtacgataacatcatgtct-aacttatggaacagagataaca 113 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ctcaaacacgggaaataccgtcta 139 ||||||||||||||||||| |||| Sbjct: 130 ctcaaacacgggaaataccttcta 153
>emb|AJ290420.1|HVU290420 Hordeum vulgare partial mRNA for small GTP-binding protein (pRac1 gene) Length = 387 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 572 agcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaag 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 agcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaag 328 Query: 632 atcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 atcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 275
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1080915 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 1080974 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgac 499 ||||||||||| |||||||||||||||||||| || || |||||||| Sbjct: 1080975 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgac 1081021 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 1080667 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 1080722 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 1080723 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 1080781 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 1080782 ctcgacaaagaggccttgctgcagctgcc 1080810 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1081305 cctgagcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctc 1081364 Query: 628 gaagatc 634 ||||||| Sbjct: 1081365 gaagatc 1081371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 |||||||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| Sbjct: 1081111 tagttgggtctttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttc 1081170 Query: 563 ctccccct 570 ||| |||| Sbjct: 1081171 ctctccct 1081178 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 1081938 caagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 1081988 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 1080606 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 1080656 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgc 680 ||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 35900715 caagctttgttccaacgagaattattggcacaccaggagcataatgc 35900669 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 1080846 cgctgaagcaagacgcaacaataataaagcctggc 1080880 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 35903725 tctgcgcctttttcttcttctt 35903704
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 33439 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 33498 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgac 499 ||||||||||| |||||||||||||||||||| || || |||||||| Sbjct: 33499 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgac 33545 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 33191 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 33246 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 33247 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 33305 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 33306 ctcgacaaagaggccttgctgcagctgcc 33334 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 33829 cctgagcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctc 33888 Query: 628 gaagatc 634 ||||||| Sbjct: 33889 gaagatc 33895 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 |||||||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| Sbjct: 33635 tagttgggtctttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttc 33694 Query: 563 ctccccct 570 ||| |||| Sbjct: 33695 ctctccct 33702 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 34462 caagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 34512 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 33130 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 33180 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 33370 cgctgaagcaagacgcaacaataataaagcctggc 33404
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 393 tgattagatcacaagatggagcaagcccccctctgcgcctttttcttcttctttgccttt 452 |||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 69623 tgattagatcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttg 69682 Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgac 499 ||||||||||| |||||||||||||||||||| || || |||||||| Sbjct: 69683 ggtggctgcagcaccacctttattgccgcatcgaaaacgcccttgac 69729 Score = 141 bits (71), Expect = 3e-30 Identities = 132/149 (88%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 115 tctcaaacacgggaaataccgtctactaagcaagttacctaaattgccacgacttgtcag 174 |||||||||| ||||||||| |||| || |||||||||| ||||||||||||||||| Sbjct: 69375 tctcaaacacaggaaataccatctaggaa---agttacctaa-ttgccacgacttgtcag 69430 Query: 175 tcacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgc 234 |||||||||||||||||||||||| ||| ||| |||| ||||||| ||||||| | ||| Sbjct: 69431 tcacacgagataatcacaaggcagaaaggaga-aaatgaaacaaacggatcgctcattgc 69489 Query: 235 ctcgacaaagagaccttgctgcagctgcc 263 |||||||||||| |||||||||||||||| Sbjct: 69490 ctcgacaaagaggccttgctgcagctgcc 69518 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 70013 cctgagcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctc 70072 Query: 628 gaagatc 634 ||||||| Sbjct: 70073 gaagatc 70079 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 |||||||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| Sbjct: 69819 tagttgggtctttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttc 69878 Query: 563 ctccccct 570 ||| |||| Sbjct: 69879 ctctccct 69886 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 70646 caagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 70696 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/53 (90%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 39 aataaactgagtgcgattacatcatgtctctacttatggaaccgagataacaa 91 |||||||||||||||||||||||||| |||||||||| ||| | |||||||| Sbjct: 69314 aataaactgagtgcgattacatcatg--tctacttatgaaacagggataacaa 69364 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 cgctgaagcaagacgtaacaataatatagcatggc 360 ||||||||||||||| |||||||||| ||| |||| Sbjct: 69554 cgctgaagcaagacgcaacaataataaagcctggc 69588
>gb|AF042330.1|AF042330 Brassica rapa rac-like small GTP binding protein mRNA, complete cds Length = 942 Score = 139 bits (70), Expect = 1e-29 Identities = 109/122 (89%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 ||||| || ||||||||||||| |||||||||||||||||| || || |||||||| ||| Sbjct: 495 agttcttcaccctgagcagtagagataggaacagcaccagggtgctcaacaaagaattgc 436 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 ||||||||||||||||||||||| ||||| |||||||| || || ||||| ||||||||| Sbjct: 435 ttgtcatctcgaagatcaagcttggttccaacgaggatgatgggaacaccaggtgcataa 376 Query: 678 tg 679 || Sbjct: 375 tg 374
>gb|AY163378.1| Zea mays putative ROP family GTPase ROP9 gene, complete cds Length = 3625 Score = 133 bits (67), Expect = 8e-28 Identities = 67/67 (100%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 2741 Query: 628 gaagatc 634 ||||||| Sbjct: 2740 gaagatc 2734 Score = 123 bits (62), Expect = 8e-25 Identities = 122/140 (87%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 361 ggcaacttcgcccttgtt--ctttgtctaccgat--tgattagatcacaagatggagcaa 416 |||| ||||||||||||| ||||||||| ||| | |||||||||||| |||||||| Sbjct: 3261 ggcaccttcgcccttgtttcttttgtctactgatcattattagatcacaaaatggagcac 3202 Query: 417 gcccccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttatt 476 ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| Sbjct: 3201 gcccccctctgcgcctttttcttcttcttcgccttaggcggctgcagcacaacctttatc 3142 Query: 477 gccgcatcaaatacaccctt 496 |||||||| || |||||||| Sbjct: 3141 gccgcatcgaagacaccctt 3122 Score = 63.9 bits (32), Expect = 6e-07 Identities = 73/85 (85%), Gaps = 5/85 (5%) Strand = Plus / Minus Query: 140 ctaagcaagttacctaaattgccacgactt-gtcagtcacacg----agataatcacaag 194 |||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 3463 ctaagcgagttacctaaattgccacgacctcgtcagtcacacacaccagataatcacaag 3404 Query: 195 gcaggaagaagagaaatcaaacaaa 219 || ||||| || ||||| ||||||| Sbjct: 3403 gcgggaaggagggaaatgaaacaaa 3379 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 |||||||||||| |||||||| ||||||||||| || ||||||||| |||| |||| || Sbjct: 3022 tagttgggtctttgagctgcactcgatgtagtatggcgcgcctatttgctttcttagctc 2963 Query: 563 ctccccct 570 ||| |||| Sbjct: 2962 ctctccct 2955 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||| || ||||| || || |||||||| |||||||||||||||| Sbjct: 2120 caagctttgtccctacgagaattattggcacaccaggtgcataatgcttca 2070 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/36 (91%), Gaps = 2/36 (5%) Strand = Plus / Minus Query: 52 cgattacatcatgtctctacttatggaaccgagata 87 |||||||||||||||| ||||||||||| |||||| Sbjct: 3556 cgattacatcatgtct--acttatggaacagagata 3523
>gb|AF498358.1| Medicago truncatula small G-protein ROP6 mRNA, complete cds Length = 1139 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 601 ccctgagcagtggtaataggaacagcaccaggatggtcgacgaagaactgcttgtcatcc 542 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||| ||||||||||| || || || ||||| || ||||| |||||||||||||||| Sbjct: 541 cgaaggtcaagctttgtgccaaccagaataatgggaacaccaggtgcataatgcttca 484
>gb|AY579208.1| Oryza sativa small GTP-binding protein RacB (RacB) gene, complete cds Length = 2930 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 401 tcacaagatggagcaagcccccctctgcgcctttttcttcttctttgcctttggtggctg 460 |||||| |||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 2930 tcacaaaatggagcacgcccccctttgcgcctttttcttcttcttcgccttgggtggctg 2871 Query: 461 cagtaccacctttattgccgcatcaaatacacccttgac 499 ||| |||||||||||||||||||| || || |||||||| Sbjct: 2870 cagcaccacctttattgccgcatcgaaaacgcccttgac 2832 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2548 cctgagcagtggtgataggaacagcaccaggatggtccacaaaaaactgcttgtcatctc 2489 Query: 628 gaagatc 634 ||||||| Sbjct: 2488 gaagatc 2482 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 |||||||||||| |||||||||||||||||||| || ||||||||| |||| ||||||| Sbjct: 2742 tagttgggtctttgagctgcattcgatgtagtatggggcgcctatttgctttcttagttc 2683 Query: 563 ctccccct 570 ||| |||| Sbjct: 2682 ctctccct 2675 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 1915 caagctttgttcccacaaggatgataggcacaccaggtgcataatgcttca 1865
>emb|AJ966571.1| Medicago sativa subsp. x varia mRNA for putative Rho GTPase (rop5 gene) Length = 1104 Score = 123 bits (62), Expect = 8e-25 Identities = 104/118 (88%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 |||||||| || || || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 604 ccctgagcggtggtaatgggaacagcaccaggatggtcgacaaagaactgcttgtcatcc 545 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||| ||||||||||| || || || ||||| || ||||| |||||||||||||||| Sbjct: 544 cgaaggtcaagctttgtgccaaccagaataatgggaacaccaggtgcataatgcttca 487
>gb|AY163379.2| Zea mays putative ROP family GTPase ROP2 gene, complete cds Length = 3761 Score = 121 bits (61), Expect = 3e-24 Identities = 111/125 (88%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 361 ggcaacttcgcccttgtt-ctttgtctaccgattgattagatcacaagatggagcaagcc 419 |||| ||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 3415 ggcaccttcgcccttgtttcttcatctaccgat-gattagatcacaaaatggagcacgcc 3357 Query: 420 cccctctgcgcctttttcttcttctttgcctttggtggctgcagtaccacctttattgcc 479 ||||||||| |||||||||||||||| ||||| || |||||||| || |||||||| ||| Sbjct: 3356 cccctctgcacctttttcttcttcttcgccttaggcggctgcagcacaacctttatcgcc 3297 Query: 480 gcatc 484 ||||| Sbjct: 3296 gcatc 3292 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 2983 cctgagcagtagtgatagggacagcaccaggatggtccacaaagaactgcttgtcgtctc 2924 Query: 628 gaagatc 634 ||||||| Sbjct: 2923 gaagatc 2917 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 503 tagttgggtcttcgagctgcattcgatgtagtagggtgcgcctattaacttttttagttc 562 ||||||||||||||||||||||||||||||||| || ||||||||| |||| |||| || Sbjct: 3178 tagttgggtcttcgagctgcattcgatgtagtatggagcgcctatttgctttcttagctc 3119 Query: 563 ctccccct 570 ||| |||| Sbjct: 3118 ctctccct 3111 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 cacacgagataatcacaaggcaggaagaagagaaatcaaacaaatggatcgcccgatgcc 235 ||||| ||||||||||||||||||||| || |||| ||||||| ||||| | ||||| Sbjct: 3584 cacaccagataatcacaaggcaggaaggaggaaaatgaaacaaacatatcgctcaatgcc 3525 Query: 236 tcgacaaagaga 247 |||||||||||| Sbjct: 3524 tcgacaaagaga 3513 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||| || ||||| ||||| |||||||| |||||||||||||||| Sbjct: 2332 caagctttgtccctacgagaataattggcacaccaggtgcataatgcttca 2282 Score = 60.0 bits (30), Expect = 1e-05 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 37 aaaataaactgagtgcgattacatcatgtctctacttatggaaccgagataaca 90 |||||||||| ||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 3722 aaaataaacttagtacgattacatcatgtct-aacttatggaacagagataaca 3670 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ctcaaacacgggaaataccgtcta 139 ||||||||||||||||||| |||| Sbjct: 3653 ctcaaacacgggaaataccttcta 3630
>gb|L19093.1|PEARHOGTPP Pisum sativum rho (ras-related) GTP-binding protein mRNA, complete cds Length = 1199 Score = 119 bits (60), Expect = 1e-23 Identities = 102/116 (87%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| || || || ||||||||||||||||| |||||||||||||||||||| Sbjct: 688 ccctgagcagtggtaatgggcacagcaccaggatggtcaacaaagaactgcttgtcatcc 629 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgctt 682 |||||||||||||| || || || || ||||| || ||||| |||||||||||||| Sbjct: 628 cgaagatcaagcttagtgccaaccagtataatgggaacaccaggtgcataatgctt 573
>ref|NM_114989.2| Arabidopsis thaliana ROP1; GTP binding AT3G51300 (ROP1) mRNA, complete cds Length = 1040 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 744 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 685 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 684 tcatctcgaagatcaagctttgttcc 659
>gb|AF375412.1| Arabidopsis thaliana AT3g51300/F24M12_340 mRNA, complete cds Length = 1033 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 737 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 678 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 677 tcatctcgaagatcaagctttgttcc 652
>gb|AY066054.1| Arabidopsis thaliana AT3g51300/F24M12_340 mRNA, complete cds Length = 594 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 434 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 375 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 374 tcatctcgaagatcaagctttgttcc 349
>emb|BX825454.1|CNS0A59R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 744 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 685 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 684 tcatctcgaagatcaagctttgttcc 659
>emb|BX826110.1|CNS0A4Z1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 818 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 524 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 465 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 464 tcatctcgaagatcaagctttgttcc 439
>gb|U49971.1|ATU49971 Arabidopsis thaliana GTP binding protein Rop1At (Rop1At) mRNA, complete cds Length = 843 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 523 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 464 Query: 621 tcatctcgaagatcaagctttgttcc 646 |||||||||||||||||||||||||| Sbjct: 463 tcatctcgaagatcaagctttgttcc 438
>ref|NM_119668.3| Arabidopsis thaliana ROP6; GTP binding AT4G35020 (ROP6) mRNA, complete cds Length = 1064 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 676 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 617 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 616 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 557 Query: 675 taatg 679 ||||| Sbjct: 556 taatg 552
>gb|BT020318.1| Arabidopsis thaliana At4g35020 gene, complete cds Length = 686 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 499 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 440 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 439 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 380 Query: 675 taatg 679 ||||| Sbjct: 379 taatg 375
>emb|BX827660.1|CNS0A2VA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 529 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 141 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 82 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 81 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 22 Query: 675 taatg 679 ||||| Sbjct: 21 taatg 17
>emb|BX829283.1|CNS0A2JR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 486 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 427 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 426 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 367 Query: 675 taatg 679 ||||| Sbjct: 366 taatg 362
>gb|BT004252.1| Arabidopsis thaliana clone RAFL15-15-G05 (R20466) putative Rho1Ps homolog Rac protein (At4g35020) mRNA, complete cds Length = 1040 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 676 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 617 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 616 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 557 Query: 675 taatg 679 ||||| Sbjct: 556 taatg 552
>gb|BT020603.1| Arabidopsis thaliana At4g35020 gene, complete cds Length = 597 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 440 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 381 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 380 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 321 Query: 675 taatg 679 ||||| Sbjct: 320 taatg 316
>gb|AF031427.1|AF031427 Arabidopsis thaliana Rho-like GTP binding protein (Rop6) mRNA, complete cds Length = 968 Score = 113 bits (57), Expect = 8e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 624 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 565 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||||||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 564 tgcttatcatctcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 505 Query: 675 taatg 679 ||||| Sbjct: 504 taatg 500
>emb|Z49191.1|BVRHO1 B.vulgaris mRNA for small G protein (clone 1S5) Length = 710 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 560 ttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgctt 619 |||||| |||||||| |||||||| ||||| |||||||| ||||| | ||| |||||||| Sbjct: 525 ttcctctccctgagctgtagtgattggaactgcaccagggtggtcgataaaaaactgctt 466 Query: 620 gtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatg 679 |||||| |||||||| ||||||||||| || || | ||| || ||||| || |||||||| Sbjct: 465 gtcatcccgaagatcgagctttgttccaacaagaacaatggggacaccaggagcataatg 406 Query: 680 cttca 684 ||||| Sbjct: 405 cttca 401
>gb|U62746.1|ATU62746 Arabidopsis thaliana Rho1Ps homolog mRNA, complete cds Length = 958 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 |||||||| || |||||||| |||| |||||| ||||||||||| || || ||||||| Sbjct: 585 tttagttcttcaccctgagcggtagagataggcacagcaccagggtgctcggcaaagaat 526 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 ||||| |||| ||||||||||||||||||||| |||||||| || || ||||| || ||| Sbjct: 525 tgcttatcatgtcgaagatcaagctttgttccaacgaggatgatgggaacaccaggagca 466 Query: 675 taatg 679 ||||| Sbjct: 465 taatg 461
>gb|AY168618.2| Brassica napus putative ROP family GTPase (ROP10) mRNA, complete cds Length = 789 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| ||||||||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 626 tcctctccctgagcagttgtaatcgggacagcgccaggatggtcgacgaagaattgctta 567 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||||||||||| ||| || ||||| || || ||||| || || |||||| Sbjct: 566 tcatctcgaagatcaagctttgatccaacaaggatgatggggacaccaggcgcgtaatgc 507 Query: 681 ttca 684 |||| Sbjct: 506 ttca 503
>gb|AY168615.1| Brassica napus putative ROP family GTPase (ROP5) mRNA, complete cds Length = 834 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| ||||||||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 671 tcctctccctgagcagttgtaatcgggacagcgccaggatggtcgacgaagaattgctta 612 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||||||||||| ||| || ||||| || || ||||| || || |||||| Sbjct: 611 tcatctcgaagatcaagctttgatccaacaaggatgatggggacaccaggcgcgtaatgc 552 Query: 681 ttca 684 |||| Sbjct: 551 ttca 548
>gb|AY168613.1| Brassica napus putative ROP family GTPase (ROP2) mRNA, partial cds Length = 597 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| ||||||||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 434 tcctctccctgagcagttgtaatcgggacagcgccaggatggtcgacgaagaattgctta 375 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||||||||||| ||| || ||||| || || ||||| || || |||||| Sbjct: 374 tcatctcgaagatcaagctttgatccaacaaggatgatggggacaccaggcgcgtaatgc 315 Query: 681 ttca 684 |||| Sbjct: 314 ttca 311
>gb|AY029330.1| Nicotiana tabacum Rac-like GTPase 1 mRNA, complete cds Length = 1025 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || || ||||||||||||||||| | ||||||||||| Sbjct: 536 tcctcgccctgagcagtagtaattggcacagcaccaggatggtctatgaagaactgctta 477 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 ||||| ||||||||||| |||||||| || || | || || ||||| || ||||||||| Sbjct: 476 tcatcccgaagatcaagttttgttccaacaagcactattggaacaccgggagcataatgc 417 Query: 681 ttca 684 |||| Sbjct: 416 ttca 413
>gb|DQ257288.1| Capsicum annuum Rho mRNA, complete cds Length = 1149 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 556 ttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaact 615 |||| ||||| ||||||||||||| || || ||||||||||||||||| || ||||| | Sbjct: 694 ttagctcctcgccctgagcagtagcaattggcacagcaccaggatggtctacgaagaatt 635 Query: 616 gcttgtcatctcgaagatcaagctttgttcc 646 |||||||||| ||||||||||| |||||||| Sbjct: 634 gcttgtcatcccgaagatcaagttttgttcc 604
>ref|NM_106234.2| Arabidopsis thaliana ATROP4 (RHO-LIKE GTP BINDING PROTEIN 4); GTP binding AT1G75840 (ATROP4) mRNA, complete cds Length = 1273 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 697 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 638 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 637 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 578 Query: 675 taatgc 680 |||||| Sbjct: 577 taatgc 572
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 103299 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 103240 Query: 621 tcatctcgaagatc 634 |||||||||||||| Sbjct: 103239 tcatctcgaagatc 103226
>gb|AF498359.1| Medicago truncatula small G-protein ROP9 mRNA, complete cds Length = 985 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 |||||||| || || || ||||| |||||||||||||| | |||||||||| ||||| Sbjct: 570 ccctgagctgtggtaatgggaacggcaccaggatggtctatgcagaactgcttatcatcc 511 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||||||||||||| || || || || || ||||| |||||||||||||||| Sbjct: 510 cgaagatcaagctttgttccaaccagaattatggggacaccaggtgcataatgcttca 453
>gb|AY081600.1| Arabidopsis thaliana similar to ATGP3 (At1g75830) mRNA, complete cds Length = 784 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 440 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 381 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 380 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 321 Query: 675 taatgc 680 |||||| Sbjct: 320 taatgc 315
>gb|AY062800.1| Arabidopsis thaliana similar to ATGP3 (At1g75830; T4O12.7) mRNA, complete cds Length = 1171 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 697 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 638 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 637 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 578 Query: 675 taatgc 680 |||||| Sbjct: 577 taatgc 572
>emb|BX815363.1|CNS0ABJR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1124 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 567 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 508 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 507 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 448 Query: 675 taatgc 680 |||||| Sbjct: 447 taatgc 442
>gb|AF085480.1|AF085480 Arabidopsis thaliana rac-like GTP binding protein Arac11 (Arac11) gene, complete cds Length = 1447 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||||||||||| || |||||||||||||||||||| | ||||||||| || Sbjct: 835 tcctctccctgagcagtagtaatcggaacagcaccaggatggtcgataaagaactgttta 776 Query: 621 tcatctcgaagatc 634 |||||||||||||| Sbjct: 775 tcatctcgaagatc 762
>gb|U64920.1|ATU64920 Arabidopsis thaliana geranylgeranylated protein ATGP3 mRNA, complete cds Length = 756 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 599 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 540 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 539 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 480 Query: 675 taatgc 680 |||||| Sbjct: 479 taatgc 474
>gb|AF031428.1|AF031428 Arabidopsis thaliana Rho-like GTP binding protein (Rop4) mRNA, complete cds Length = 1117 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 624 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 565 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 564 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 505 Query: 675 taatgc 680 |||||| Sbjct: 504 taatgc 499
>gb|U52350.1|ATU52350 Arabidopsis thaliana GTP-binding protein (ARAC5) mRNA, complete cds Length = 1210 Score = 91.7 bits (46), Expect = 3e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 555 tttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaac 614 ||||||||||| ||||| ||||| ||||| || |||||||||||||| | ||||| Sbjct: 635 tttagttcctctccctggtttgtagtaataggcactgcaccaggatggtctatgaagaat 576 Query: 615 tgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgca 674 |||||||||||||||||||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct: 575 tgcttgtcatctcgaagatcgagtttcgttccaacgaggattataggaacaccaggggca 516 Query: 675 taatgc 680 |||||| Sbjct: 515 taatgc 510
>gb|AY168614.1| Brassica napus putative ROP family GTPase (ROP4) mRNA, complete cds Length = 779 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| ||||||||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 616 tcctctccctgagcagttgtaatcgggacagcgccaggatggtcgacgaagaattgctta 557 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||||||||||| ||| || ||||| | || ||||| || || |||||| Sbjct: 556 tcatctcgaagatcaagctttgatccaacaaggatgacggggacaccaggcgcgtaatgc 497 Query: 681 ttca 684 |||| Sbjct: 496 ttca 493
>emb|AJ250174.1|NTA250174 Nicotiana tabacum mRNA for putative rac protein (rac gene) Length = 803 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 556 ttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaact 615 |||| ||||| |||||||||||||| || || |||||||| |||||||| | ||||| | Sbjct: 487 ttagctcctcgccctgagcagtagtaattggcacagcaccgggatggtctatgaagaatt 428 Query: 616 gcttgtcatctcgaagatcaagctttgttcc 646 |||| ||||| |||||||||||||||||||| Sbjct: 427 gcttatcatcccgaagatcaagctttgttcc 397
>dbj|AB024996.1| Cicer arietinum mRNA for rac-type small GTP-binding protein, complete cds Length = 1059 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| ||||| || || ||||| || || |||||||||||||| |||||| ||| Sbjct: 554 agttcctcaccctgtgctgtggtgattggcaccgcaccaggatggtcttgaaagaattgc 495 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 || ||||| ||||||||||| |||||||| ||||| ||||| || ||||| || |||||| Sbjct: 494 ttatcatcccgaagatcaagttttgttccaacgagaataattggaacaccaggagcataa 435 Query: 678 tgc 680 ||| Sbjct: 434 tgc 432
>ref|NM_101863.2| Arabidopsis thaliana ROP2; GTP binding AT1G20090 (ROP2) mRNA, complete cds Length = 1188 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 674 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 615 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 614 acaaggataatgggaacaccaggagcataatgc 582 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 831 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 775
>gb|AF332438.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 588 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 404 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 345 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 344 acaaggataatgggaacaccaggagcataatgc 312 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 561 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 505
>gb|AY056308.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 619 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 404 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 345 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 344 acaaggataatgggaacaccaggagcataatgc 312 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 561 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 505
>gb|AF360154.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 1226 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 674 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 615 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 614 acaaggataatgggaacaccaggagcataatgc 582 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 831 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 775
>emb|BX813673.1|CNS0AC3D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1057 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 557 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 498 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 497 acaaggataatgggaacaccaggagcataatgc 465 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 714 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 658
>gb|U49972.1|ATU49972 Arabidopsis thaliana GTP binding protein Rop2At (Rop2At) mRNA, complete cds Length = 935 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 469 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 410 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 409 acaaggataatgggaacaccaggagcataatgc 377 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 626 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 570
>gb|U45236.1|ATU45236 Arabidopsis thaliana rac-like protein (ARAC4) mRNA, complete cds Length = 1160 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttccc 647 |||||||||||||| || | |||||| |||||||||||||||||||| || ||||| || Sbjct: 663 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatcgagttttgtccca 604 Query: 648 acgaggataataggcacacctggtgcataatgc 680 || |||||||| || ||||| || ||||||||| Sbjct: 603 acaaggataatgggaacaccaggagcataatgc 571 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 820 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 764
>ref|NM_119762.3| Arabidopsis thaliana ARAC6; GTP binding AT4G35950 (ARAC6) mRNA, complete cds Length = 1157 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 783 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 724 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 723 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 664 Query: 681 ttca 684 |||| Sbjct: 663 ttca 660
>gb|BT012810.1| Lycopersicon esculentum clone 113830F, mRNA sequence Length = 1158 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 ||||||||||| ||||||||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 603 ggaacagcacctggatggtccacaaagaattgcttatcctctcggagatctagctttgtt 544 Query: 645 cccacgaggataataggcacacctggtgcataatgc 680 || || || ||||| || || || || ||||||||| Sbjct: 543 ccaacaagaataattggaactccaggagcataatgc 508 Score = 44.1 bits (22), Expect = 0.60 Identities = 52/62 (83%) Strand = Plus / Minus Query: 435 ttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaatacaccc 494 |||||||||||| ||| ||||| || || |||||||| || ||||||||||| ||| || Sbjct: 753 ttcttcttcttttgcttgggtggttgtaggaccaccttaatggccgcatcaaaaacagcc 694 Query: 495 tt 496 || Sbjct: 693 tt 692
>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence Length = 113210 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 |||||||||| || |||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 14619 cctgagcagtggtaataggaacagcacctggatggtcgacgaagaactgcttgtcatccc 14560 Query: 628 gaag 631 |||| Sbjct: 14559 gaag 14556 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||| || || || ||||| || ||||| |||||||||||||||| Sbjct: 13051 caagctttgtgccaaccagaataatgggaacaccaggtgcataatgcttca 13001
>emb|AJ439334.1|HVU439334 Hordeum vulgare mRNA for putative RACD protein Length = 699 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| | |||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 494 ccctgagcagtggaaataggaaccgccccagggtgatccacaaaaaactgcttgtcatcc 435 Query: 627 cgaagatcaagctttgttcc 646 || ||||||||||||||||| Sbjct: 434 cgcagatcaagctttgttcc 415
>gb|BT005217.1| Arabidopsis thaliana At4g35950 mRNA, complete cds Length = 594 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 434 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 375 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 374 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 315 Query: 681 ttca 684 |||| Sbjct: 314 ttca 311
>gb|AY087336.1| Arabidopsis thaliana clone 34369 mRNA, complete sequence Length = 1067 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 747 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 688 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 687 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 628 Query: 681 ttca 684 |||| Sbjct: 627 ttca 624
>dbj|AK117209.1| Arabidopsis thaliana At4g35950 mRNA for putative ras-related small GTP-binding protein, complete cds, clone: RAFL16-75-N14 Length = 1110 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 783 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 724 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 723 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 664 Query: 681 ttca 684 |||| Sbjct: 663 ttca 660
>gb|AF107663.1| Arabidopsis thaliana rac homolog (RAC2) mRNA, complete cds Length = 758 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 493 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 434 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 433 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 374 Query: 681 ttca 684 |||| Sbjct: 373 ttca 370
>gb|AF079487.1|AF079487 Arabidopsis thaliana rac-like GTP binding protein Arac6 (Arac6) mRNA, complete cds Length = 991 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 666 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 607 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| ||| Sbjct: 606 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcatagtgc 547 Query: 681 ttca 684 |||| Sbjct: 546 ttca 543
>ref|NM_127334.2| Arabidopsis thaliana ARAC1; GTP binding AT2G17800 (ARAC1) mRNA, complete cds Length = 1248 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 878 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 819 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 818 ttgtcatcccgaagatctagtttggttccaacaagaactatagggacaccaggggcataa 759 Query: 678 tgcttca 684 ||||||| Sbjct: 758 tgcttca 752
>gb|BT000393.1| Arabidopsis thaliana unknown protein (At2g17800) mRNA, complete cds Length = 695 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 437 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 378 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 377 ttgtcatcccgaagatctagtttggttccaacaagaactatagggacaccaggggcataa 318 Query: 678 tgcttca 684 ||||||| Sbjct: 317 tgcttca 311
>emb|AJ251210.1|MSA251210 Medicago sativa mRNA for rac G-Protein (rac1 gene) Length = 917 Score = 77.8 bits (39), Expect = 4e-11 Identities = 98/118 (83%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 |||||||| || || || ||||| |||||||||||||| | |||||||||| ||||| Sbjct: 457 ccctgagctgtggtaatgggaacggcaccaggatggtctatgcagaactgcttatcatcc 398 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||| |||||||||||||| || || || || || |||| |||||||||||||||| Sbjct: 397 cgaaggtcaagctttgttccaaccagaattatggggacacnaggtgcataatgcttca 340
>gb|AY093046.1| Arabidopsis thaliana unknown protein (At2g17800) mRNA, complete cds Length = 1110 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 797 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 738 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 737 ttgtcatcccgaagatctagtttggttccaacaagaactatagggacaccaggggcataa 678 Query: 678 tgcttca 684 ||||||| Sbjct: 677 tgcttca 671
>emb|BX820295.1|CNS0A8LT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1236 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 872 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 813 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 812 ttgtcatcccgaagatcgagtttggttccaacaagaactatagggacaccaggggcataa 753 Query: 678 tgcttca 684 ||||||| Sbjct: 752 tgcttca 746
>gb|AF233447.1|AF233447 Physcomitrella patens rac 4 protein (rac4) mRNA, partial cds Length = 1081 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 609 aagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacct 668 |||||||||||||| ||||||||||| || || |||||||||||||| ||||||||| | Sbjct: 345 aagaactgcttgtcgtctcgaagatctagtttcgttcccacgaggatgataggcacagat 286 Query: 669 ggtgcataatg 679 || |||||||| Sbjct: 285 ggcgcataatg 275 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| | |||||| ||||| || ||||||||||| || |||||||| Sbjct: 523 ctttttcttcttcttcggctttgggggctgaagaaccacctttatggcggcatcaaa 467
>gb|U64919.1|ATU64919 Arabidopsis thaliana geranylgeranylated protein ATGP2 mRNA, complete cds Length = 1008 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 659 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 600 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 599 ttgtcatcccgaagatctagtttggttccaacaagaactatagggacaccaggggcataa 540 Query: 678 tgcttca 684 ||||||| Sbjct: 539 tgcttca 533
>gb|U41295.1|ATU41295 Arabidopsis thaliana GTP binding protein (ARAC1) mRNA, complete cds Length = 1191 Score = 77.8 bits (39), Expect = 4e-11 Identities = 105/127 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| |||||||||||||| || || ||||| ||||| ||||| | |||||||| Sbjct: 877 agttcctctccctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgt 818 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 |||||||| |||||||| || || ||||| || || | ||||| ||||| || |||||| Sbjct: 817 ttgtcatcccgaagatctagtttggttccaacaagaactatagggacaccaggggcataa 758 Query: 678 tgcttca 684 ||||||| Sbjct: 757 tgcttca 751
>gb|AY168616.2| Brassica napus putative ROP family GTPase (ROP6) mRNA, complete cds Length = 865 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| ||||||||||| || || | ||||| ||||||||||| || ||||| ||||| Sbjct: 703 tcctctccctgagcagttgtaatcgcgacagcgccaggatggtcgacgaagaattgctta 644 Query: 621 tcatctcgaagatcaagctttg 642 |||||||||||||||||||||| Sbjct: 643 tcatctcgaagatcaagctttg 622
>emb|AJ966572.1| Medicago sativa subsp. x varia mRNA for putative Rho GTPase (rop3 gene) Length = 1106 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 |||||||| || || || ||||| |||||||||||||| | ||||||||| ||||| Sbjct: 621 ccctgagctgtggtaatgggaacggcaccaggatggtctatgcagaactgctgatcatcc 562 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||| |||||||||||||| || || || || || ||||| |||||||||||||||| Sbjct: 561 cgaaggtcaagctttgttccaaccagaattatggggacaccaggtgcataatgcttca 504
>gb|AF218381.1|AF218381 Oryza sativa subsp. japonica small GTP binding protein RACDP (RACD) mRNA, complete cds Length = 850 Score = 75.8 bits (38), Expect = 2e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| | ||||| ||||||||||| || || || || || ||||| ||||| Sbjct: 539 ccctgagcagtggaaataggtacagcaccagggtgatctacgaaaaattgcttatcatcc 480 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 || ||||||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 479 cgcagatcaagctttgttccaacgagaattattggcacaccaggagcataatgc 426 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 685 tctgcgcctttttcttcttctt 664
>dbj|AK067796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116I24, full insert sequence Length = 1103 Score = 75.8 bits (38), Expect = 2e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| | ||||| ||||||||||| || || || || || ||||| ||||| Sbjct: 515 ccctgagcagtggaaataggtacagcaccagggtgatctacgaaaaattgcttatcatcc 456 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 || ||||||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 455 cgcagatcaagctttgttccaacgagaattattggcacaccaggagcataatgc 402 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 661 tctgcgcctttttcttcttctt 640
>dbj|AK067504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108N17, full insert sequence Length = 957 Score = 75.8 bits (38), Expect = 2e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 567 ccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatct 626 ||||||||||| | ||||| ||||||||||| || || || || || ||||| ||||| Sbjct: 556 ccctgagcagtggaaataggtacagcaccagggtgatctacgaaaaattgcttatcatcc 497 Query: 627 cgaagatcaagctttgttcccacgaggataataggcacacctggtgcataatgc 680 || ||||||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 496 cgcagatcaagctttgttccaacgagaattattggcacaccaggagcataatgc 443 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 702 tctgcgcctttttcttcttctt 681
>gb|DQ450841.1| Solanum chacoense Rac-like GTP-binding protein (RAC1) mRNA, complete cds Length = 1226 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 ||||||||||| ||||||||||||||||| || || || ||||| ||||| ||||||||| Sbjct: 564 ggaacagcacctggatggtccacaaagaattgtttatcctctcggagatctagctttgtt 505 Query: 645 cccacgaggataataggcacacctggtgcataatgc 680 || || || ||||| || || || || ||||||||| Sbjct: 504 ccaacaagaataattggaactccaggagcataatgc 469
>emb|BX826523.1|CNS0A43X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1139 Score = 71.9 bits (36), Expect = 3e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 764 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 705 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcata 676 |||||||||||||| || || ||||| || |||| ||| || ||||| || ||||| Sbjct: 704 tcatctcgaagatctagtttggttccaacaaggacaattgggacaccaggagcata 649
>gb|AF146340.1|AF146340 Physcomitrella patens Rac-like GTP binding protein (rac3) mRNA, complete cds Length = 1255 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 594 ccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacgagg 653 ||||||||||| | || || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 641 ccaggatggtcggcgaaaaattgcttgtcatctcgaagatctagcttcgttccgacgagg 582 Query: 654 ataatagg 661 |||||||| Sbjct: 581 ataatagg 574
>emb|AJ222545.2|NTROP1 Nicotiana tabacum mRNA for Rop subfamily GTPase Length = 950 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 556 ttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaact 615 |||| ||||| |||||||||||||| || || |||||||| || ||||| | ||||| | Sbjct: 482 ttagctcctcaccctgagcagtagtaattggcacagcaccggggtggtctatgaagaatt 423 Query: 616 gcttgtcatctcgaagatcaagctttgttcc 646 |||| ||||| ||||||||||| |||||||| Sbjct: 422 gcttatcatcccgaagatcaagttttgttcc 392
>gb|AF498357.1| Medicago truncatula small G-protein ROP3 mRNA, complete cds Length = 1178 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||| ||||| || || ||||| || | |||||||||||||| ||||||||| Sbjct: 572 agttcctcaccctgtgctgtggtgattggcgccgcaccaggatggtcttgaaagaactgg 513 Query: 618 ttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggtgcataa 677 | ||||| ||||||||||| |||||||| ||||| ||||| || ||||| || |||||| Sbjct: 512 ctatcatcccgaagatcaagttttgttccaacgagaataattggaacaccaggagcataa 453 Query: 678 tgc 680 ||| Sbjct: 452 tgc 450
>gb|AY168617.1| Brassica napus putative ROP family GTPase (ROP9) mRNA, complete cds Length = 757 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 556 ttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaact 615 |||||||||| ||||||| ||| || ||||| ||||||||||| ||||| || ||||||| Sbjct: 602 ttagttcctctccctgagaagtggtaataggtacagcaccagggtggtcaacgaagaact 543 Query: 616 gcttgtcatctcgaagatc 634 | |||||||| | |||||| Sbjct: 542 gtttgtcatccctaagatc 524
>gb|U64923.1|NTU64923 Nicotiana tabacum geranylgeranylated protein NTGP2 mRNA, complete cds Length = 1066 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 556 ttagttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaact 615 |||| ||||| |||||||||||||| || || |||||||| || ||||| | ||||| | Sbjct: 631 ttagctcctcaccctgagcagtagtaattggcacagcaccggggtggtctatgaagaatt 572 Query: 616 gcttgtcatctcgaagatcaagctttgttcc 646 |||| ||||| ||||||||||| |||||||| Sbjct: 571 gcttatcatcccgaagatcaagttttgttcc 541
>emb|AJ966573.1| Medicago sativa subsp. x varia mRNA for putative Rho GTPase (rop6 gene) Length = 1266 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 591 gcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacg 650 |||||||||||||| ||||||||| | ||||| ||||||||||| |||||||| ||| Sbjct: 521 gcaccaggatggtcttgaaagaactggctatcatcccgaagatcaagttttgttccaacg 462 Query: 651 aggataataggcacacctggtgcataatgc 680 || ||||| || ||||| || ||||||||| Sbjct: 461 agaataattggaacaccaggagcataatgc 432
>emb|AJ619853.1| Medicago sativa mRNA for small GTPase Rac4 (rac4 gene) Length = 594 Score = 67.9 bits (34), Expect = 4e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 591 gcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgttcccacg 650 |||||||||||||| ||||||||| | ||||| ||||||||||| |||||||| ||| Sbjct: 404 gcaccaggatggtcttgaaagaactggctatcatcccgaagatcaagttttgttccaacg 345 Query: 651 aggataataggcacacctggtgcataatgc 680 || ||||| || ||||| || ||||||||| Sbjct: 344 agaataattggaacaccaggagcataatgc 315
>emb|BX828080.1|CNS0A3XW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZB12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1530 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 ||||| |||||| |||| || ||||| ||||||||||||||||| | || ||||| ||| Sbjct: 1069 tcctctccctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttg 1010 Query: 621 tcatctcgaagatc 634 |||||||||||||| Sbjct: 1009 tcatctcgaagatc 996
>gb|AF115476.1|AF115476 Physcomitrella patens rac-like GTP binding protein (rac2) mRNA, complete cds Length = 1558 Score = 65.9 bits (33), Expect = 2e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 561 tcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttg 620 |||||||| |||| |||||| || ||| | || |||||||| || ||||||| || ||| Sbjct: 964 tcctccccttgagaagtagttattggagccgctccaggatgatcagcaaagaattgtttg 905 Query: 621 tcatctcgaagatcaagctttgttcccacgaggataataggcaca 665 ||||| ||||||||||| |||||||| ||||| || || |||||| Sbjct: 904 tcatcgcgaagatcaagttttgttccgacgagaatgattggcaca 860
>emb|AJ496226.1|NTA496226 Nicotiana tabacum mRNA for putative rac protein (rac2 gene) Length = 993 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 ||||||||||| |||||||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct: 438 ggaacagcacctggatggtccaggaagaattgcttatcctctcggagatctagctttgtt 379 Query: 645 cccacgaggataataggcacacctggtgcataatgc 680 || || || ||||| || || || || ||||||||| Sbjct: 378 ccaacaagaataattggaactccaggagcataatgc 343
>gb|U64924.1|NTU64924 Nicotiana tabacum geranylgeranylated protein NTGP3 mRNA, complete cds Length = 1008 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 ||||||||||| |||||||||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct: 498 ggaacagcacctggatggtccaggaagaattgcttatcctctcggagatctagctttgtt 439 Query: 645 cccacgaggataataggcacacctggtgcataatgc 680 || || || ||||| || || || || ||||||||| Sbjct: 438 ccaacaagaataattggaactccaggagcataatgc 403
>gb|AF165925.2| Gossypium hirsutum RAC-like G-protein Rac1 mRNA, complete cds Length = 640 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 609 aagaactgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacct 668 ||||||||||| || ||||||||||||||||| || || || || ||||| || ||||| Sbjct: 402 aagaactgcttatcttctcgaagatcaagcttagtcccaacaagaataattggaacaccg 343 Query: 669 ggtgcataatg 679 ||||||||||| Sbjct: 342 ggtgcataatg 332
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||| |||| || ||||| ||||||||||||||||| | || ||||| |||||||||| Sbjct: 96140 cctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttgtcatctc 96199 Query: 628 gaagatc 634 ||||||| Sbjct: 96200 gaagatc 96206
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| |||| |||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 128970 cctgagcggtagagataggcacagcaccagggtgctcggcaaagaattgcttatcatctc 128911 Query: 628 gaagatc 634 ||||||| Sbjct: 128910 gaagatc 128904 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatg 679 ||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 128806 caagctttgttccaacgaggatgatgggaacaccaggagcataatg 128761
>emb|AL079347.1|ATF11I11 Arabidopsis thaliana DNA chromosome 4, BAC clone F11I11 (ESSA project) Length = 103150 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| |||| |||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 99511 cctgagcggtagagataggcacagcaccagggtgctcggcaaagaattgcttatcatctc 99452 Query: 628 gaagatc 634 ||||||| Sbjct: 99451 gaagatc 99445 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatg 679 ||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 99347 caagctttgttccaacgaggatgatgggaacaccaggagcataatg 99302
>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project) Length = 106007 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||| |||| || ||||| ||||||||||||||||| | || ||||| |||||||||| Sbjct: 30871 cctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttgtcatctc 30930 Query: 628 gaagatc 634 ||||||| Sbjct: 30931 gaagatc 30937
>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII project) Length = 80346 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| |||| |||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 30003 cctgagcggtagagataggcacagcaccagggtgctcggcaaagaattgcttatcatctc 29944 Query: 628 gaagatc 634 ||||||| Sbjct: 29943 gaagatc 29937 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatg 679 ||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 29839 caagctttgttccaacgaggatgatgggaacaccaggagcataatg 29794
>emb|BX826554.1|CNS0A48N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||| |||| || ||||| ||||||||||||||||| | || ||||| |||||||||| Sbjct: 1133 cctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttgtcatctc 1074 Query: 628 gaagatc 634 ||||||| Sbjct: 1073 gaagatc 1067
>gb|AF115473.1|AF115473 Arabidopsis thaliana cultivar Landsberg erecta Arac6 (Arac6) gene, complete cds Length = 1762 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||| |||| || ||||| ||||||||||||||||| | || ||||| |||||||||| Sbjct: 1340 cctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttgtcatctc 1281 Query: 628 gaagatc 634 ||||||| Sbjct: 1280 gaagatc 1274
>gb|AF115472.1|AF115472 Arabidopsis thaliana cultivar Landsberg erecta Arac5 (Arac5) gene, complete cds Length = 1566 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 576 gtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 ||||| ||||| || |||||||||||||| | ||||| |||||||||||||||||||| Sbjct: 1216 gtagtaataggcactgcaccaggatggtctatgaagaattgcttgtcatctcgaagatc 1158
>gb|AF115471.1|AF115471 Arabidopsis thaliana cultivar Landsberg erecta Arac4 (Arac4) gene, complete cds Length = 1794 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 |||||||||||||| || | |||||| |||||||||||||||||||| Sbjct: 1218 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatc 1172 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 1556 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 1500
>gb|AF115470.1|AF115470 Arabidopsis thaliana cultivar Landsberg erecta Arac3 (Arac3) gene, complete cds Length = 1792 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| |||| |||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 1299 cctgagcggtagagataggcacagcaccagggtgctcggcaaagaattgcttatcatctc 1240 Query: 628 gaagatc 634 ||||||| Sbjct: 1239 gaagatc 1233 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatg 679 ||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 1135 caagctttgttccaacgaggatgatgggaacaccaggagcataatg 1090
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 588 acagcaccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 |||||||||||||| || | |||||| |||||||||||||||||||| Sbjct: 43698 acagcaccaggatgatctataaagaattgcttgtcatctcgaagatc 43744 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 431 ctttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 ||||||||||||||| |||||||||||| || ||||| ||||| || |||||||| Sbjct: 43360 ctttttcttcttcttctgctttggtggctgaagcaccacttttatagctgcatcaaa 43416
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 576 gtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 ||||| ||||| || |||||||||||||| | ||||| |||||||||||||||||||| Sbjct: 26102 gtagtaataggcactgcaccaggatggtctatgaagaattgcttgtcatctcgaagatc 26044
>gb|U43501.1|ATU43501 Arabidopsis thaliana Rac-like protein (ARAC3) gene, complete cds Length = 1162 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| |||| |||||| ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 718 cctgagcggtagagataggcacagcaccagggtgctcggcaaagaattgcttatcatctc 659 Query: 628 gaagatc 634 ||||||| Sbjct: 658 gaagatc 652 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatg 679 ||||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 554 caagctttgttccaacgaggatgatgggaacaccaggagcataatg 509
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||| |||| || ||||| ||||||||||||||||| | || ||||| |||||||||| Sbjct: 87944 cctgaacagtggtaatagggacagcaccaggatggtcgatgaaaaactgtttgtcatctc 88003 Query: 628 gaagatc 634 ||||||| Sbjct: 88004 gaagatc 88010
>gb|AF126055.1| Zea mays Rop4 small GTP binding protein mRNA, complete cds Length = 1058 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 |||||||||||||| || || ||||| |||||||| ||||| || |||||||| ||||| Sbjct: 585 ggaacagcaccagggtgatcaacaaaaaactgcttatcatcacgcagatcaagttttgtc 526 Query: 645 cccacgaggataataggcac 664 || || ||||| || ||||| Sbjct: 525 ccaacaaggattatgggcac 506 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 439 tcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 |||||||| |||||||||||| || |||||||| ||||| || ||||| Sbjct: 731 tcttcttttgctttggtggctggagaaccaccttaattgctgcgtcaaa 683
>gb|AY108669.1| Zea mays PCO105291 mRNA sequence Length = 1119 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 585 ggaacagcaccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctttgtt 644 |||||||||||||| || || ||||| |||||||| ||||| || |||||||| ||||| Sbjct: 622 ggaacagcaccagggtgatcaacaaaaaactgcttatcatcacgcagatcaagttttgtc 563 Query: 645 cccacgaggataataggcac 664 || || ||||| || ||||| Sbjct: 562 ccaacaaggattatgggcac 543 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 439 tcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 |||||||| |||||||||||| || |||||||| ||||| || ||||| Sbjct: 768 tcttcttttgctttggtggctggagaaccaccttaattgctgcgtcaaa 720
>gb|AY883090.1| Vigna radiata small GTP-binding protein ROP1 mRNA, complete cds Length = 916 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 612 aactgcttgtcatctcgaagatcaagctttgttcccacgaggataataggcacacctggt 671 ||||||||||||||||| | ||| || |||||||||||||| | ||||||||| ||| Sbjct: 504 aactgcttgtcatctcgcaaatctagttttgttcccacgagcactataggcacatttgga 445 Query: 672 gcataatg 679 |||||||| Sbjct: 444 gcataatg 437 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Minus Query: 438 ttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 |||||||||| |||||||||| || | | ||||||||||| |||||||| Sbjct: 678 ttcttctttggctttggtggcctcaatgcgacctttattgcagcatcaaa 629
>gb|AF233446.1|AF233446 Physcomitrella patens rac 1 protein (rac1) mRNA, partial cds Length = 1083 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 594 ccaggatggtccacaaagaactgcttgtcatctcgaagatcaagctt 640 ||||||||||| |||||||||| || |||||||||||||| ||||| Sbjct: 926 ccaggatggtcagcaaagaactgtttatcatctcgaagatctagctt 880 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 |||||||| || |||||||| ||||| |||||||| || | || ||||| |||| ||| Sbjct: 1067 ggtggctgaagaaccaccttgattgctgcatcaaaaactgctttcacattctgttgagtc 1008 Query: 513 ttcgagct 520 |||||||| Sbjct: 1007 ttcgagct 1000
>gb|AF115466.1|AF115466 Arabidopsis thaliana cultivar Landsberg erecta Arac1 (Arac1) gene, complete cds Length = 2804 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||||||||| || || ||||| ||||| ||||| | |||||||| |||||||| | Sbjct: 2356 cctgagcagtagtaattggtacagcgccagggtggtcaatgaagaactgtttgtcatccc 2297 Query: 628 gaagatc 634 ||||||| Sbjct: 2296 gaagatc 2290
>emb|AJ278666.1|ZMA278666 Zea mays mRNA for putative Rop family GTPase ROP5 (rop5 gene) Length = 915 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 558 agttcctccccctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgc 617 |||||||||||||| || ||||| | ||| || |||||||||||||| || ||| | ||| Sbjct: 452 agttcctccccctgtgctgtagtaacaggtaccgcaccaggatggtcaactaagtagtgc 393 Query: 618 ttgtcatctcgaagatc 634 |||| || |||||||| Sbjct: 392 ctgtcttcacgaagatc 376
>gb|AY870928.1| Physcomitrella patens small rho-1 GTP-binding protein (Rac-1) gene, complete cds Length = 4922 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 594 ccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 ||||||||||| |||||||||| || |||||||||||||| Sbjct: 3220 ccaggatggtcagcaaagaactgtttatcatctcgaagatc 3180 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 432 tttttcttcttctttgcctttggtggctgcagtaccacctttattgccgcatcaaa 487 |||||||||||||| ||| |||||||| || |||||||| ||||| |||||||| Sbjct: 3972 tttttcttcttcttctgcttgggtggctgaagaaccaccttgattgctgcatcaaa 3917
>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE Length = 116729 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 568 cctgagcagtagtgataggaacagcaccaggatggtccacaaagaactgcttgtcatctc 627 ||||||| || || || ||||| |||||||||||||| | |||||||||| ||||| | Sbjct: 51286 cctgagctgtggtaatgggaacggcaccaggatggtctatgcagaactgcttatcatccc 51227 Query: 628 gaagatc 634 ||||||| Sbjct: 51226 gaagatc 51220 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 ||||||||||||| || || || || || ||||| |||||||||||||||| Sbjct: 50678 caagctttgttccaaccagaattatggggacaccaggtgcataatgcttca 50628
>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence Length = 107180 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgcttca 684 |||||||||| || || || ||||| || ||||| |||||||||||||||| Sbjct: 106054 caagctttgtgccaaccagaataatgggaacaccaggtgcataatgcttca 106004
>gb|AF329814.1|AF329814 Oryza sativa subsp. japonica small GTP binding protein RACDP (RACD) gene, complete cds Length = 4327 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgc 680 ||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 1263 caagctttgttccaacgagaattattggcacaccaggagcataatgc 1217 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 4272 tctgcgcctttttcttcttctt 4251
>gb|AF115469.1|AF115469 Arabidopsis thaliana cultivar Landsberg erecta Arac2 (Arac2) gene, complete cds Length = 2091 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 436 tcttcttctttgcctttggtggc 458 ||||||||||||||||||||||| Sbjct: 1759 tcttcttctttgcctttggtggc 1737
>dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0264G11 Length = 55919 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgc 680 ||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 6884 caagctttgttccaacgagaattattggcacaccaggagcataatgc 6838 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 9894 tctgcgcctttttcttcttctt 9873
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 634 caagctttgttcccacgaggataataggcacacctggtgcataatgc 680 ||||||||||||| ||||| || || |||||||| || ||||||||| Sbjct: 91261 caagctttgttccaacgagaattattggcacaccaggagcataatgc 91215 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 94271 tctgcgcctttttcttcttctt 94250
>gb|AE008680.1| Rickettsia conorii str. Malish 7, section 112 of 114 of the complete genome Length = 10615 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 aaataacaagcaaaaataaaat 41 |||||||||||||||||||||| Sbjct: 9897 aaataacaagcaaaaataaaat 9876
>emb|Z73962.1|LJRAC2 L.japonicus mRNA for small GTP-binding protein, RAC2 Length = 982 Score = 44.1 bits (22), Expect = 0.60 Identities = 61/74 (82%) Strand = Plus / Minus Query: 453 ggtggctgcagtaccacctttattgccgcatcaaatacacccttgacatttagttgggtc 512 |||||||||| || ||||| || || |||||||| ||| |||| ||||| |||| ||| Sbjct: 654 ggtggctgcaaaacaaccttgatagcagcatcaaacacagccttcacattctgttgagtc 595 Query: 513 ttcgagctgcattc 526 || ||||||||||| Sbjct: 594 tttgagctgcattc 581
>gb|U28929.1| Caenorhabditis elegans cosmid F09C12, complete sequence Length = 25662 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaaataaa 44 ||||||| |||||||||||||||||| Sbjct: 9324 aaaataaaaagcaaaaataaaataaa 9299
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 taacaagcaaaaataaaataaa 44 |||||||||||||||||||||| Sbjct: 13916 taacaagcaaaaataaaataaa 13937
>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13, complete sequence Length = 151298 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 taacaagcaaaaataaaataaa 44 |||||||||||||||||||||| Sbjct: 74322 taacaagcaaaaataaaataaa 74301
>dbj|AB036062.1| Oryza sativa (japonica cultivar-group) osRACD mRNA for small GTP binding protein, partial cds Length = 290 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tctgcgcctttttcttcttctt 445 |||||||||||||||||||||| Sbjct: 115 tctgcgcctttttcttcttctt 94
>gb|AC126539.9| Mus musculus chromosome 8, clone RP24-112G5, complete sequence Length = 158710 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aacaagcaaaaataaaataaa 44 ||||||||||||||||||||| Sbjct: 61499 aacaagcaaaaataaaataaa 61479
>gb|AE017133.1| Yersinia pestis biovar Medievalis str. 91001 section 7 of 16 of the complete genome Length = 290874 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 150139 aaaataacaagcaaaaataaa 150119
>gb|BC003828.1| Mus musculus RAS-related C3 botulinum substrate 1, mRNA (cDNA clone MGC:6235 IMAGE:3593957), complete cds Length = 2319 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>gb|AF360108.1| Penaeus (Litopenaeus) vannamei microsatellite TUMXLv9.28 sequence Length = 345 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 tttttcttcttctttgccttt 452 ||||||||||||||||||||| Sbjct: 219 tttttcttcttctttgccttt 239
>ref|NM_009007.1| Mus musculus RAS-related C3 botulinum substrate 1 (Rac1), mRNA Length = 2269 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>gb|AC147040.3| Pan troglodytes BAC clone RP43-121E14 from 7, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aacaagcaaaaataaaataaa 44 ||||||||||||||||||||| Sbjct: 38062 aacaagcaaaaataaaataaa 38082
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 2581759 aaaataacaagcaaaaataaa 2581779
>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence Length = 177877 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 6258 aagatcaagcttcgtccccacgaggatgatagg 6290
>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence Length = 252718 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataaaataa 43 ||||| ||||||||||||||||||| Sbjct: 170595 aaaattacaagcaaaaataaaataa 170619
>ref|XM_755043.1| Ustilago maydis 521 hypothetical protein (UM03989.1) partial mRNA Length = 1863 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 ccctctgcgcctttttcttcttctt 445 ||||||||||||| ||||||||||| Sbjct: 763 ccctctgcgccttcttcttcttctt 739
>ref|XM_747906.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g16330) partial mRNA Length = 2367 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 cgcctttttcttcttctttgc 448 ||||||||||||||||||||| Sbjct: 618 cgcctttttcttcttctttgc 598
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aataacaagcaaaaataaaat 41 ||||||||||||||||||||| Sbjct: 1462893 aataacaagcaaaaataaaat 1462873
>emb|CR387996.13| Zebrafish DNA sequence from clone DKEY-183N6 in linkage group 3, complete sequence Length = 210145 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 aaataacaagcaaaaataaaataaa 44 |||| |||||||||||||||||||| Sbjct: 171077 aaattacaagcaaaaataaaataaa 171053
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 ttgaagtgaaaataacaagcaaaaa 35 |||||||||||||||| |||||||| Sbjct: 108369 ttgaagtgaaaataactagcaaaaa 108393
>emb|AL158070.11| Human DNA sequence from clone RP11-235C23 on chromosome 9q31.1-31.3 Contains part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins, the 3' end of the CSDUFD1 gene for cystatin and DUF19 domain containing 1, a novel gene, the FCMD gene for Fukuyama type congenital muscular dystrophy protein, the TAL2 gene for T-cell acute lymphocytic leukemia 2 protein and two CpG islands, complete sequence Length = 167005 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 aaataacaagcaaaaataaaataaa 44 |||||||||| |||||||||||||| Sbjct: 148431 aaataacaagtaaaaataaaataaa 148407
>gb|AC175091.3| Mus musculus chromosome 5, clone wi1-995K17, complete sequence Length = 38324 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 1256 aagatcaagcttcgtccccacgaggatgatagg 1224
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 2313495 aaaataacaagcaaaaataaa 2313475
>emb|AL031866.1|YP102KB Yersinia pestis 102 kbases unstable region: from 1 to 119443 Length = 119443 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 14448 aaaataacaagcaaaaataaa 14468
>emb|AJ414150.1| Yersinia pestis strain CO92 complete genome; segment 10/20 Length = 335050 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 304039 aaaataacaagcaaaaataaa 304019
>emb|X57277.1|MMRAC1H M.musculus rac1 gene Length = 886 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 497 aagatcaagcttcgtccccacgaggatgatagg 465
>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194851 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 caggaagaagagaaatcaaac 216 ||||||||||||||||||||| Sbjct: 23301 caggaagaagagaaatcaaac 23281
>gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, complete sequence Length = 206384 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aacaagcaaaaataaaataaa 44 ||||||||||||||||||||| Sbjct: 3320 aacaagcaaaaataaaataaa 3300
>dbj|AK081613.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130051H24 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 1796 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 82 aagatcaagcttcgtccccacgaggatgatagg 50
>dbj|AK088825.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430027D23 product:RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (P21-RAC1) (RAS-LIKE PROTEIN TC25) homolog [Mus musculus], full insert sequence Length = 999 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 565 aagatcaagcttcgtccccacgaggatgatagg 533
>dbj|AK009017.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300003C18 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 904 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>dbj|AK034601.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430013G17 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 2269 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>dbj|AK008435.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010204J02 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 1062 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3, complete sequence Length = 189210 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataaa 39 ||||||||||||||||||||| Sbjct: 187935 aaaataacaagcaaaaataaa 187955
>dbj|AK076023.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610100O16 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 2308 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 595 aagatcaagcttcgtccccacgaggatgatagg 563
>dbj|AK047969.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130025F01 product:RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (RHO FAMILY, SMALL GTP BINDING PROTEIN RAC1) homolog [Mus musculus], full insert sequence Length = 2270 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 556 aagatcaagcttcgtccccacgaggatgatagg 524
>dbj|AK011072.2| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510040M09 product:RAS-related C3 botulinum substrate 1, full insert sequence Length = 987 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 554 aagatcaagcttcgtccccacgaggatgatagg 522
>gb|AF146341.1|AF146341 Physcomitrella patens Rac-like GTP binding protein (rac3) precursor RNA, complete cds Length = 1983 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 594 ccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 ||||||||||| | || || |||||||||||||||||||| Sbjct: 1143 ccaggatggtcggcgaaaaattgcttgtcatctcgaagatc 1103
>gb|BC045984.1| Danio rerio RIO kinase 1 (yeast), mRNA (cDNA clone MGC:56195 IMAGE:5413872), complete cds Length = 1884 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 tgaaaataacaagcaaaaataaaat 41 ||||||||||||||||||| ||||| Sbjct: 190 tgaaaataacaagcaaaaagaaaat 214
>emb|BX005341.6| Zebrafish DNA sequence from clone DKEY-209J17 in linkage group 16, complete sequence Length = 158356 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 aaaataaaataaactgagtgc 52 ||||||||||||||||||||| Sbjct: 112300 aaaataaaataaactgagtgc 112280
>dbj|AK219413.1| Mus musculus cDNA, clone:Y2G0148G07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000001903, based on BLAT search Length = 194 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 131 aagatcaagcttcgtccccacgaggatgatagg 99
>dbj|AK184868.1| Mus musculus cDNA, clone:Y0G0131M18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000001903, based on BLAT search Length = 172 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 629 aagatcaagctttgttcccacgaggataatagg 661 |||||||||||| || ||||||||||| ||||| Sbjct: 131 aagatcaagcttcgtccccacgaggatgatagg 99
>gb|AC022497.18| Homo sapiens 3 BAC RP11-80P20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147816 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aacaagcaaaaataaaataaa 44 ||||||||||||||||||||| Sbjct: 144820 aacaagcaaaaataaaataaa 144840
>gb|AC161811.6| Mus musculus chromosome 5, clone RP23-456E9, complete sequence Length = 163565 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aagcaaaaataaaataaactg 47 ||||||||||||||||||||| Sbjct: 101088 aagcaaaaataaaataaactg 101068
>emb|BX004789.7| Mouse DNA sequence from clone RP24-132K7 on chromosome 4, complete sequence Length = 79922 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 ggaagaagagaaatcaaacaaatgg 222 |||||||||||||| |||||||||| Sbjct: 52595 ggaagaagagaaattaaacaaatgg 52571
>gb|CP000218.1| Drosophila melanogaster genomic scaffold 211000022280780 Length = 166742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gacgaccatgagagtgcagct 324 ||||||||||||||||||||| Sbjct: 11085 gacgaccatgagagtgcagct 11105
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 aagcaaaaataaaataaactg 47 ||||||||||||||||||||| Sbjct: 27354 aagcaaaaataaaataaactg 27374
>dbj|AP006144.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT23P21, TM0261, complete sequence Length = 121882 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 cttcttctttgcctttggtgg 457 ||||||||||||||||||||| Sbjct: 67552 cttcttctttgcctttggtgg 67572
>ref|NM_212995.1| Danio rerio RIO kinase 1 (yeast) (riok1), mRNA Length = 1884 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 tgaaaataacaagcaaaaataaaat 41 ||||||||||||||||||| ||||| Sbjct: 190 tgaaaataacaagcaaaaagaaaat 214
>ref|NM_188600.1| Oryza sativa (japonica cultivar-group), Ozsa8203 predicted mRNA Length = 645 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gtcttcgagctgcattcgatgtag 533 ||||| |||||||||||||||||| Sbjct: 497 gtcttggagctgcattcgatgtag 474
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ttttcttcttctttgccttt 452 |||||||||||||||||||| Sbjct: 101314 ttttcttcttctttgccttt 101333
>gb|AF452884.3| Beet black scorch virus, complete genome Length = 3644 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 ttggtggctgcagtaccacc 470 |||||||||||||||||||| Sbjct: 3278 ttggtggctgcagtaccacc 3259
>gb|AY626780.1| Beet black scorch virus, complete genome Length = 3644 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 ttggtggctgcagtaccacc 470 |||||||||||||||||||| Sbjct: 3278 ttggtggctgcagtaccacc 3259
>ref|XM_455350.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05962g predicted mRNA Length = 804 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 attgccgcatcaaatacacc 493 |||||||||||||||||||| Sbjct: 341 attgccgcatcaaatacacc 322
>gb|AC162872.9| Mus musculus chromosome 3, clone RP24-346J6, complete sequence Length = 147221 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ttttcttcttctttgccttt 452 |||||||||||||||||||| Sbjct: 96822 ttttcttcttctttgccttt 96803
>gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, complete sequence Length = 245165 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cacaaggcaggaagaagaga 208 |||||||||||||||||||| Sbjct: 125878 cacaaggcaggaagaagaga 125859
>ref|XM_849238.1| PREDICTED: Canis familiaris hypothetical protein LOC611555 (LOC611555), mRNA Length = 810 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ctttttcttcttctttgcct 450 |||||||||||||||||||| Sbjct: 582 ctttttcttcttctttgcct 563
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence Length = 179409 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 66480 acaagcaaaaataaaataaa 66461
>emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in linkage group 21, complete sequence Length = 204347 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 54162 gaagagaaatcaaacaaatg 54181
>emb|CR388042.8| Zebrafish DNA sequence from clone CH211-254C12 in linkage group 15, complete sequence Length = 158539 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 32251 gaagagaaatcaaacaaatg 32270
>emb|CR925784.13| Zebrafish DNA sequence from clone DKEYP-104A3 in linkage group 11, complete sequence Length = 174101 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaaataaaataaactgagt 50 |||||||||||||||||||| Sbjct: 92875 aaaaataaaataaactgagt 92894
>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 35790 gaagagaaatcaaacaaatg 35771
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gtgaaaataacaagcaaaaa 35 |||||||||||||||||||| Sbjct: 104042 gtgaaaataacaagcaaaaa 104023
>emb|BX927164.19| Zebrafish DNA sequence from clone DKEY-27P2 in linkage group 5, complete sequence Length = 108759 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 70592 gaagagaaatcaaacaaatg 70611
>gb|AC134535.4| Mus musculus BAC clone RP24-371E20 from chromosome 7, complete sequence Length = 214571 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tttttcttcttctttgcctt 451 |||||||||||||||||||| Sbjct: 47840 tttttcttcttctttgcctt 47859
>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence Length = 181902 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 gaaaataacaagcaaaaataaaataaac 45 ||||| || ||||||||||||||||||| Sbjct: 99287 gaaaaaaataagcaaaaataaaataaac 99260
>gb|AC004158.1|HUAC004158 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-10F4, complete sequence Length = 180551 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataa 38 |||||||||||||||||||| Sbjct: 64300 aaaataacaagcaaaaataa 64319
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ctttttcttcttctttgcct 450 |||||||||||||||||||| Sbjct: 78772 ctttttcttcttctttgcct 78791
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 122982 acaagcaaaaataaaataaa 123001
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataaaata 42 ||||||||||||||| |||||||| Sbjct: 129498 aaaataacaagcaaacataaaata 129521
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence Length = 147345 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 119327 acaagcaaaaataaaataaa 119346
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 531 tagtagggtgcgcctattaactttttta 558 ||||||||| | |||||||||||||||| Sbjct: 23722 tagtagggttctcctattaactttttta 23695
>gb|AC134049.24| Medicago truncatula clone mth2-21j3, complete sequence Length = 124857 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gtgaaaataacaagcaaaaa 35 |||||||||||||||||||| Sbjct: 103543 gtgaaaataacaagcaaaaa 103562
>gb|AC148227.14| Medicago truncatula clone mth2-8f11, complete sequence Length = 116139 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aataacaagcaaaaataaaa 40 |||||||||||||||||||| Sbjct: 39295 aataacaagcaaaaataaaa 39314
>emb|BX957234.7| Zebrafish DNA sequence from clone CH211-286L10 in linkage group 23, complete sequence Length = 180834 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 149503 gaagagaaatcaaacaaatg 149522
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 ttcttcttctttgcctttgg 454 |||||||||||||||||||| Sbjct: 169386 ttcttcttctttgcctttgg 169367
>ref|XM_775531.1| PREDICTED: Strongylocentrotus purpuratus similar to CTF18, chromosome transmission fidelity factor 18 homolog (LOC575115), mRNA Length = 3012 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tcttcttctttgcctttggt 455 |||||||||||||||||||| Sbjct: 1864 tcttcttctttgcctttggt 1845
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 attgccgcatcaaatacacc 493 |||||||||||||||||||| Sbjct: 572236 attgccgcatcaaatacacc 572217
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1181476 aaataaaataaactgagtgc 1181457
>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3, complete sequence Length = 162342 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 90023 gaagagaaatcaaacaaatg 90004
>gb|AC115088.6| Homo sapiens chromosome 11, clone RP11-792G9, complete sequence Length = 200274 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taacaagcaaaaataaaata 42 |||||||||||||||||||| Sbjct: 130892 taacaagcaaaaataaaata 130873
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 gcaaaaataaaataaactga 48 |||||||||||||||||||| Sbjct: 609601 gcaaaaataaaataaactga 609620
>emb|BX927404.7| Zebrafish DNA sequence from clone DKEY-18F7 in linkage group 19, complete sequence Length = 94279 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 85223 gaagagaaatcaaacaaatg 85242
>emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in linkage group 14, complete sequence Length = 148362 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 22736 gaagagaaatcaaacaaatg 22717
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1229357 aaataaaataaactgagtgc 1229338
>gb|AC018452.11| Homo sapiens chromosome 3 BAC RP11-23D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171523 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaaata 42 |||||| ||||||||||||||||| Sbjct: 139401 aaaatagcaagcaaaaataaaata 139378
>gb|AC027137.8| Staphylococcus aureus clone sabac-123, complete sequence Length = 49643 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 35416 aaataaaataaactgagtgc 35435
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aacaagcaaaaataaaataa 43 |||||||||||||||||||| Sbjct: 17985 aacaagcaaaaataaaataa 17966
>gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, complete sequence Length = 162662 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ccttgctgcagctgccggtgggta 271 |||| ||||||||||||||||||| Sbjct: 145089 ccttcctgcagctgccggtgggta 145066
>gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, complete sequence Length = 201200 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ccttgctgcagctgccggtgggta 271 |||| ||||||||||||||||||| Sbjct: 18919 ccttcctgcagctgccggtgggta 18896
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1192615 aaataaaataaactgagtgc 1192596
>gb|S79308.1| Rac13=21.8 kda GTP-binding protein [Gossypium hirsutum=cotton plants, cv. Acala SJ-2, boll fibers, mRNA Partial, 913 nt] Length = 913 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 471 tttattgccgcatcaaatacacccttgacatttagttgggtcttcgagctgcattc 526 |||||||| ||||| || ||| |||| ||||| ||||||| || ||||||||||| Sbjct: 535 tttattgcagcatcgaaaacagccttcacattctgttgggttttggagctgcattc 480
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1088841 aaataaaataaactgagtgc 1088822
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 34097 gaagagaaatcaaacaaatg 34116
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1168796 aaataaaataaactgagtgc 1168777
>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete sequence Length = 144391 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaaata 42 ||||||||||| |||||||||||| Sbjct: 1514 aaaataacaagaaaaaataaaata 1491
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ttcttcttctttgcctttgg 454 |||||||||||||||||||| Sbjct: 114728 ttcttcttctttgcctttgg 114747
>gb|AC010651.7|AC010651 Homo sapiens chromosome 16 clone RP11-413O10, complete sequence Length = 165868 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aaaataacaagcaaaaataa 38 |||||||||||||||||||| Sbjct: 90499 aaaataacaagcaaaaataa 90518
>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence Length = 134928 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ccttgctgcagctgccggtgggta 271 |||| ||||||||||||||||||| Sbjct: 76697 ccttcctgcagctgccggtgggta 76720
>emb|AL606905.8| Mouse DNA sequence from clone RP23-394K13 on chromosome 2, complete sequence Length = 59640 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaaata 42 ||||||||||| |||||||||||| Sbjct: 59154 aaaataacaagaaaaaataaaata 59131
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gtcttcgagctgcattcgatgtag 533 ||||| |||||||||||||||||| Sbjct: 7164377 gtcttggagctgcattcgatgtag 7164400
>gb|AC009507.3| Homo sapiens BAC clone RP11-543L11 from 2, complete sequence Length = 122213 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 aaaataacaagcaaaaataaaata 42 ||||| |||||||||||||||||| Sbjct: 54432 aaaatcacaagcaaaaataaaata 54409
>gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N22, complete sequence Length = 169921 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 136547 acaagcaaaaataaaataaa 136566
>gb|AC007252.2| Homo sapiens BAC clone RP11-407F2 from 2, complete sequence Length = 159952 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 cctttttcttcttctttgcctttg 453 ||||||||||||| |||||||||| Sbjct: 5264 cctttttcttcttttttgcctttg 5287
>gb|AC007968.3| Homo sapiens BAC clone RP11-430P16 from 2, complete sequence Length = 144319 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 46323 acaagcaaaaataaaataaa 46342
>gb|AC009315.5| Homo sapiens BAC clone RP11-466K9 from 2, complete sequence Length = 143794 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agagaaatcaaacaaatgga 223 |||||||||||||||||||| Sbjct: 128106 agagaaatcaaacaaatgga 128087
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gtcttcgagctgcattcgatgtag 533 ||||| |||||||||||||||||| Sbjct: 59025 gtcttggagctgcattcgatgtag 59048
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 70729 gaagagaaatcaaacaaatg 70710
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1152803 aaataaaataaactgagtgc 1152784
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1153029 aaataaaataaactgagtgc 1153010
>emb|BX681418.6| Mouse DNA sequence from clone RP23-191O20 on chromosome X, complete sequence Length = 206167 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 aaataacaagcaaaaataaaataa 43 ||||||| |||||||||||||||| Sbjct: 197651 aaataaccagcaaaaataaaataa 197674
>emb|BX649518.6| Zebrafish DNA sequence from clone CH211-162I8 in linkage group 4, complete sequence Length = 182631 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 49457 gaagagaaatcaaacaaatg 49476
>emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 17 tgaaaataacaagcaaaaataaaataaa 44 |||||| ||||| ||||||||||||||| Sbjct: 22968 tgaaaaaaacaaacaaaaataaaataaa 22995
>gb|AC153577.2| Mus musculus 6 BAC RP23-373I18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 153953 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 acaagcaaaaataaaataaa 44 |||||||||||||||||||| Sbjct: 48122 acaagcaaaaataaaataaa 48103
>emb|BX072532.7| Zebrafish DNA sequence from clone CH211-10B9 in linkage group 12, complete sequence Length = 160268 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 102897 gaagagaaatcaaacaaatg 102916
>dbj|AK071126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077H07, full insert sequence Length = 1163 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gtcttcgagctgcattcgatgtag 533 ||||| |||||||||||||||||| Sbjct: 771 gtcttggagctgcattcgatgtag 748
>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14, complete sequence Length = 157355 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gaagagaaatcaaacaaatg 221 |||||||||||||||||||| Sbjct: 25314 gaagagaaatcaaacaaatg 25333
>gb|AY105584.1| Zea mays PCO099720 mRNA sequence Length = 1115 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 591 gcaccaggatggtccacaaagaactgcttgtcatctcgaagatc 634 |||||||||||||| || ||| | |||||||| || |||||||| Sbjct: 595 gcaccaggatggtcaactaagtagtgcttgtcttcacgaagatc 552
>emb|AL929056.21| Zebrafish DNA sequence from clone CH211-227I14 in linkage group 8, complete sequence Length = 157468 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gataatcacaaggcaggaag 202 |||||||||||||||||||| Sbjct: 150916 gataatcacaaggcaggaag 150897
>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence Length = 203591 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aaaaataaaataaactgagt 50 |||||||||||||||||||| Sbjct: 178605 aaaaataaaataaactgagt 178624
>gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, complete sequence Length = 178807 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 agcaaaaataaaataaactg 47 |||||||||||||||||||| Sbjct: 105860 agcaaaaataaaataaactg 105841
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1194562 aaataaaataaactgagtgc 1194543
>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete sequence Length = 200108 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aaaaataaaataaactgagt 50 |||||||||||||||||||| Sbjct: 92810 aaaaataaaataaactgagt 92791
>dbj|AP003158.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences Length = 194260 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tttttcttcttctttgcctt 451 |||||||||||||||||||| Sbjct: 49644 tttttcttcttctttgcctt 49625
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaataaaataaactgagtgc 52 |||||||||||||||||||| Sbjct: 1120028 aaataaaataaactgagtgc 1120009 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,238,024 Number of Sequences: 3902068 Number of extensions: 8238024 Number of successful extensions: 292138 Number of sequences better than 10.0: 257 Number of HSP's better than 10.0 without gapping: 258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 290740 Number of HSP's gapped (non-prelim): 1377 length of query: 684 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 661 effective length of database: 17,143,297,704 effective search space: 11331719782344 effective search space used: 11331719782344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
