ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 172 bits (87), Expect = 8e-40 Identities = 143/162 (88%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||| | |||||| | |||||||||||||||||||||||||||||| ||| Sbjct: 565 gcactggaagcccgatgggacgcgcctgccgcagtagttgacgaggaggctgaggttgat 506 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||||| ||||||||||||||| |||| ||||||| |||| | ||||| |||||||||| Sbjct: 505 gggcaggttgaggttgatgcccaggacgttggccctgaggacggtgcagaggcacaccgc 446 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| || |||||||||||||||||||||||||| Sbjct: 445 cgcctccaggtccgccagcccctggatcagcgtgcagcacgg 404
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 438 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 379 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 378 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 337
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 26823978 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 26823919 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 26823918 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 26823859 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 26823858 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 26823817 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||||||||||||||||||||||||||||||||||| | || ||| | || |||| || Sbjct: 26833577 gggacgttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtg 26833518 Query: 512 atgccaaggatgttggccttga 533 ||||| || | ||||||||||| Sbjct: 26833517 atgccgagcacgttggccttga 26833496
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 2521 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 2462 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 2461 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 2402 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 2401 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 2360 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||||||||||||||||||||||||||||||||||| | || ||| | || |||| || Sbjct: 12120 gggacgttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtg 12061 Query: 512 atgccaaggatgttggccttga 533 ||||| || | ||||||||||| Sbjct: 12060 atgccgagcacgttggccttga 12039
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 90031 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 89972 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 89971 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 89912 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 89911 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 89870 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||||||||||||||||||||||||||||||||||| | || ||| | || |||| || Sbjct: 99630 gggacgttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtg 99571 Query: 512 atgccaaggatgttggccttga 533 ||||| || | ||||||||||| Sbjct: 99570 atgccgagcacgttggccttga 99549
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 438 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 379 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 378 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 337
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 149 bits (75), Expect = 1e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||||||| |||||||||||||||||| || ||||||||||||||| Sbjct: 423 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 364 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | |||||||||||| || ||||||||| || ||| |||||||| |||||||||| Sbjct: 363 ggggaggttgaggttgattccgaggatgttgcccctgatggccgtgcagaggcacaccgc 304 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 303 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 262
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 127 bits (64), Expect = 4e-26 Identities = 126/147 (85%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 198959 gcactggaagccggaggggacggagcggccgcagtagttgacgaggaggctgaggttgat 198900 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||| | Sbjct: 198899 ggggaggttgaggttgatgccaaggatgttggcgcggagggcggtgcagaggcacacggc 198840 Query: 556 cgccttcaggtcggcgagcccctggat 582 |||| ||||||||||| |||||||| Sbjct: 198839 ggcctcaaggtcggcgaggccctggat 198813 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 189908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 189849 Query: 526 ggccttga 533 |||||||| Sbjct: 189848 ggccttga 189841 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||| ||| |||| ||| | |||||| |||||||| |||||||| Sbjct: 187204 gcagtagttgagaaggagagagagatcgacggggatgttgagattgatgccgaggatgtt 187145 Query: 526 ggccttga 533 |||||||| Sbjct: 187144 ggccttga 187137 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gacgaggaggctgaggtcgatgggcacgt 503 |||||||||| ||||| |||||||||||| Sbjct: 31306729 gacgaggaggttgaggccgatgggcacgt 31306701
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 127 bits (64), Expect = 4e-26 Identities = 126/147 (85%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 36026 gcactggaagccggaggggacggagcggccgcagtagttgacgaggaggctgaggttgat 35967 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||| | Sbjct: 35966 ggggaggttgaggttgatgccaaggatgttggcgcggagggcggtgcagaggcacacggc 35907 Query: 556 cgccttcaggtcggcgagcccctggat 582 |||| ||||||||||| |||||||| Sbjct: 35906 ggcctcaaggtcggcgaggccctggat 35880 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 26975 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 26916 Query: 526 ggccttga 533 |||||||| Sbjct: 26915 ggccttga 26908 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 502 gttgaggttgatgccaaggatgttggccttga 533 |||||| |||||||| |||||||||||||||| Sbjct: 24235 gttgagattgatgccgaggatgttggccttga 24204
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 127 bits (64), Expect = 4e-26 Identities = 126/147 (85%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 132959 gcactggaagccggaggggacggagcggccgcagtagttgacgaggaggctgaggttgat 132900 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||| | Sbjct: 132899 ggggaggttgaggttgatgccaaggatgttggcgcggagggcggtgcagaggcacacggc 132840 Query: 556 cgccttcaggtcggcgagcccctggat 582 |||| ||||||||||| |||||||| Sbjct: 132839 ggcctcaaggtcggcgaggccctggat 132813 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 123908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 123849 Query: 526 ggccttga 533 |||||||| Sbjct: 123848 ggccttga 123841 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||| ||| |||| ||| | |||||| |||||||| |||||||| Sbjct: 121204 gcagtagttgagaaggagagagagatcgacggggatgttgagattgatgccgaggatgtt 121145 Query: 526 ggccttga 533 |||||||| Sbjct: 121144 ggccttga 121137
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 127 bits (64), Expect = 4e-26 Identities = 126/147 (85%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 198959 gcactggaagccggaggggacggagcggccgcagtagttgacgaggaggctgaggttgat 198900 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||| | Sbjct: 198899 ggggaggttgaggttgatgccaaggatgttggcgcggagggcggtgcagaggcacacggc 198840 Query: 556 cgccttcaggtcggcgagcccctggat 582 |||| ||||||||||| |||||||| Sbjct: 198839 ggcctcaaggtcggcgaggccctggat 198813 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 189908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 189849 Query: 526 ggccttga 533 |||||||| Sbjct: 189848 ggccttga 189841 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||| ||| |||| ||| | |||||| |||||||| |||||||| Sbjct: 187204 gcagtagttgagaaggagagagagatcgacggggatgttgagattgatgccgaggatgtt 187145 Query: 526 ggccttga 533 |||||||| Sbjct: 187144 ggccttga 187137 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gacgaggaggctgaggtcgatgggcacgt 503 |||||||||| ||||| |||||||||||| Sbjct: 31397245 gacgaggaggttgaggccgatgggcacgt 31397217
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 127 bits (64), Expect = 4e-26 Identities = 126/147 (85%) Strand = Plus / Plus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 |||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 63697 gcactggaagccggaggggacggagcggccgcagtagttgacgaggaggctgaggttgat 63756 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||||||||||||||||||||||||||| ||| || ||||| |||||||| | Sbjct: 63757 ggggaggttgaggttgatgccaaggatgttggcgcggagggcggtgcagaggcacacggc 63816 Query: 556 cgccttcaggtcggcgagcccctggat 582 |||| ||||||||||| |||||||| Sbjct: 63817 ggcctcaaggtcggcgaggccctggat 63843 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 72746 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 72805 Query: 526 ggccttga 533 |||||||| Sbjct: 72806 ggccttga 72813 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||| ||| |||| ||| | |||||| |||||||| |||||||| Sbjct: 75450 gcagtagttgagaaggagagagagatcgacggggatgttgagattgatgccgaggatgtt 75509 Query: 526 ggccttga 533 |||||||| Sbjct: 75510 ggccttga 75517
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 125 bits (63), Expect = 2e-25 Identities = 137/162 (84%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| Sbjct: 390 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 331 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||| ||||||||||| || |||||| |||||| |||||||| |||||||||| Sbjct: 330 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcagaggcacaccgc 271 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 270 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 229
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 125 bits (63), Expect = 2e-25 Identities = 137/162 (84%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| Sbjct: 147637 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 147578 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||| ||||||||||| || |||||| |||||| |||||||| |||||||||| Sbjct: 147577 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcagaggcacaccgc 147518 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 147517 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 147476 Score = 113 bits (57), Expect = 7e-22 Identities = 131/156 (83%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| ||| | Sbjct: 144431 gaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacggggag 144372 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| ||||||||| | ||| |||||||| ||||| |||| ||||| Sbjct: 144371 gttgaggttgatgccgaggatgttgcctctgatggccgtgcagaggcataccgccgcctc 144312 Query: 562 caggtcggcgagcccctggatcagcgtgcagcacgg 597 |||||| ||||||||| | ||||| ||||||||| Sbjct: 144311 gaggtcgacgagcccctccagcagcgggcagcacgg 144276 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 451 ggggacgttcttgccgcagtagttgacgaggaggct 486 ||||||| |||||| ||||||||||| |||||||| Sbjct: 157754 ggggacgcacttgccacagtagttgacaaggaggct 157719
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||| | Sbjct: 66834 gaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggatggggag 66893 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| || | ||||||||||| ||||||||||||||||||| ||||| Sbjct: 66894 gttgaggttgatgcccagcacgttggccttgatggccgtgcacaggcacaccgccgcctc 66953 Query: 562 caggtc 567 |||||| Sbjct: 66954 caggtc 66959
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 125 bits (63), Expect = 2e-25 Identities = 137/162 (84%) Strand = Plus / Minus Query: 436 gcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgat 495 ||||| |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| Sbjct: 27717011 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 27716952 Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgn 555 ||| | ||| ||||||||||| || |||||| |||||| |||||||| |||||||||| Sbjct: 27716951 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcagaggcacaccgc 27716892 Query: 556 cgccttcaggtcggcgagcccctggatcagcgtgcagcacgg 597 ||||| |||||| ||||||||| | ||||| ||||||||| Sbjct: 27716891 cgcctcgaggtcgacgagcccctccagcagcgggcagcacgg 27716850 Score = 113 bits (57), Expect = 7e-22 Identities = 131/156 (83%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| ||| | Sbjct: 27713805 gaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacggggag 27713746 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| ||||||||| | ||| |||||||| ||||| |||| ||||| Sbjct: 27713745 gttgaggttgatgccgaggatgttgcctctgatggccgtgcagaggcataccgccgcctc 27713686 Query: 562 caggtcggcgagcccctggatcagcgtgcagcacgg 597 |||||| ||||||||| | ||||| ||||||||| Sbjct: 27713685 gaggtcgacgagcccctccagcagcgggcagcacgg 27713650 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 ||||||||||||| || |||||||| ||||||||| | ||||||||| Sbjct: 31096108 gggcactggaagctggaggggacgtgcttgccgcactcgttgacgag 31096062 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 |||||||||||| ||| ||| |||| ||||||||||| |||||||| Sbjct: 31085689 gggcactggaagtcggagggcacgtacttgccgcagtcattgacgag 31085643 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 451 ggggacgttcttgccgcagtagttgacgaggaggct 486 ||||||| |||||| ||||||||||| |||||||| Sbjct: 27727128 ggggacgcacttgccacagtagttgacaaggaggct 27727093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcatgcgcgtacgtacgtac 367 |||||||||||||||||||| Sbjct: 23327021 gcatgcgcgtacgtacgtac 23327002
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||| | Sbjct: 21267525 gaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggatggggag 21267466 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| || | ||||||||||| ||||||||||||||||||| ||||| Sbjct: 21267465 gttgaggttgatgcccagcacgttggccttgatggccgtgcacaggcacaccgccgcctc 21267406 Query: 562 caggtc 567 |||||| Sbjct: 21267405 caggtc 21267400 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||| | Sbjct: 21178168 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21178227 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21178228 gcacgttggccttga 21178242 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | ||||||||||| ||| | Sbjct: 21171454 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21171513 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21171514 gcacgttggccttga 21171528 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||| ||| | || ||| |||||||| | Sbjct: 21174900 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21174959 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21174960 gcacgttggccttga 21174974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| | ||||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 10072250 gttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatg 10072307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| ||||| || ||||||||| |||| ||| | ||||||||||||| Sbjct: 21143566 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatg 21143621 Score = 42.1 bits (21), Expect = 2.1 Identities = 98/124 (79%) Strand = Plus / Plus Query: 472 gttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgttggcctt 531 ||||| || |||||| || |||| ||| | ||||||||||||||| || | |||||||| Sbjct: 21148328 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21148387 Query: 532 gagcgccgtgcacaggcacaccgncgccttcaggtcggcgagcccctggatcagcgtgca 591 || || ||||| ||||| || | || | |||||||||| |||||| | ||||| ||| Sbjct: 21148388 gacggcggtgcagaggcagacggcggcgtcgaggtcggcgatcccctgcagcagcgagca 21148447 Query: 592 gcac 595 |||| Sbjct: 21148448 gcac 21148451 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 21139199 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 21139258 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 21139259 gcacgttggcctt 21139271
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||| | Sbjct: 21278789 gaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggatggggag 21278730 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| || | ||||||||||| ||||||||||||||||||| ||||| Sbjct: 21278729 gttgaggttgatgcccagcacgttggccttgatggccgtgcacaggcacaccgccgcctc 21278670 Query: 562 caggtc 567 |||||| Sbjct: 21278669 caggtc 21278664 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||| | Sbjct: 21189432 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21189491 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21189492 gcacgttggccttga 21189506 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | ||||||||||| ||| | Sbjct: 21182718 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21182777 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21182778 gcacgttggccttga 21182792 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||| ||| | || ||| |||||||| | Sbjct: 21186164 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21186223 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 21186224 gcacgttggccttga 21186238 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| | ||||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 10078289 gttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatg 10078346 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| ||||| || ||||||||| |||| ||| | ||||||||||||| Sbjct: 21154830 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatg 21154885 Score = 42.1 bits (21), Expect = 2.1 Identities = 98/124 (79%) Strand = Plus / Plus Query: 472 gttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgttggcctt 531 ||||| || |||||| || |||| ||| | ||||||||||||||| || | |||||||| Sbjct: 21159592 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21159651 Query: 532 gagcgccgtgcacaggcacaccgncgccttcaggtcggcgagcccctggatcagcgtgca 591 || || ||||| ||||| || | || | |||||||||| |||||| | ||||| ||| Sbjct: 21159652 gacggcggtgcagaggcagacggcggcgtcgaggtcggcgatcccctgcagcagcgagca 21159711 Query: 592 gcac 595 |||| Sbjct: 21159712 gcac 21159715 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 21150463 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 21150522 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 21150523 gcacgttggcctt 21150535
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 113 bits (57), Expect = 7e-22 Identities = 131/156 (83%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| ||| | Sbjct: 384 gaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacggggag 325 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| ||||||||| | ||| |||||||| ||||| |||| ||||| Sbjct: 324 gttgaggttgatgccgaggatgttgcctctgatggccgtgcagaggcataccgccgcctc 265 Query: 562 caggtcggcgagcccctggatcagcgtgcagcacgg 597 |||||| ||||||||| | ||||| ||||||||| Sbjct: 264 gaggtcgacgagcccctccagcagcgggcagcacgg 229
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 113 bits (57), Expect = 7e-22 Identities = 131/156 (83%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||| ||| ||||||||||||||||| || |||||||||||||| ||| | Sbjct: 459 gaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacggggag 400 Query: 502 gttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgcctt 561 ||||||||||||||| ||||||||| | ||| |||||||| ||||| |||| ||||| Sbjct: 399 gttgaggttgatgccgaggatgttgcctctgatggccgtgcagaggcataccgccgcctc 340 Query: 562 caggtcggcgagcccctggatcagcgtgcagcacgg 597 |||||| ||||||||| | ||||| ||||||||| Sbjct: 339 gaggtcgacgagcccctccagcagcgggcagcacgg 304
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 107 bits (54), Expect = 4e-20 Identities = 119/141 (84%) Strand = Plus / Minus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgcc 516 |||||||||||||| ||||| || |||||||||||||||||| | ||| ||||||||||| Sbjct: 442 gttcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttaaggttgatgcc 383 Query: 517 aaggatgttggccttgagcgccgtgcacaggcacaccgncgccttcaggtcggcgagccc 576 |||||||||||||||| || ||||| ||||| || | |||| ||||||| ||||||| Sbjct: 382 gaggatgttggccttgacggcggtgcagaggcagacggcggcctccaggtcgacgagccc 323 Query: 577 ctggatcagcgtgcagcacgg 597 | | ||||| ||||||||| Sbjct: 322 gtccagcagcgagcagcacgg 302
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 91.7 bits (46), Expect = 2e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||| |||||||||||||||||| ||| ||| |||| | || ||| |||| ||||||| Sbjct: 490 gggacgctcttgccgcagtagttgaggagcagggtgagcttgacggggacgtcgaggttg 431 Query: 512 atgccaaggatgttggccttgagcgccgtgcacaggcacaccgncgccttcaggtcggcg 571 ||||| || | ||||||||||||||| ||||| ||||| || | |||| ||||||||| Sbjct: 430 atgccgagcacgttggccttgagcgcggtgcagaggcagacggcggcctctaggtcggcg 371 Query: 572 agccc 576 ||||| Sbjct: 370 agccc 366
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||||||||||||||||||||||||||||||||||| | || ||| | || |||| || Sbjct: 448 gggacgttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtg 389 Query: 512 atgccaaggatgttggccttga 533 ||||| || | ||||||||||| Sbjct: 388 atgccgagcacgttggccttga 367
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 452 gggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttg 511 |||||||||||||||||||||||||||||||||||||| | || ||| | || |||| || Sbjct: 448 gggacgttcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtg 389 Query: 512 atgccaaggatgttggccttga 533 ||||| || | ||||||||||| Sbjct: 388 atgccgagcacgttggccttga 367
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||| | Sbjct: 367 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 308 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 307 gcacgttggccttga 293
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | ||||||||||| ||| | Sbjct: 373 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 314 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 313 gcacgttggccttga 299
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | ||||||||||| ||| | Sbjct: 34252 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 34193 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 34192 gcacgttggccttga 34178 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||| | Sbjct: 27538 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 27479 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 27478 gcacgttggccttga 27464 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||| ||| | || ||| |||||||| | Sbjct: 30806 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 30747 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 30746 gcacgttggccttga 30732 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| ||||| || ||||||||| |||| ||| | ||||||||||||| Sbjct: 62140 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatg 62085 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 66507 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 66448 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 66447 gcacgttggcctt 66435 Score = 42.1 bits (21), Expect = 2.1 Identities = 98/124 (79%) Strand = Plus / Minus Query: 472 gttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgttggcctt 531 ||||| || |||||| || |||| ||| | ||||||||||||||| || | |||||||| Sbjct: 57378 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 57319 Query: 532 gagcgccgtgcacaggcacaccgncgccttcaggtcggcgagcccctggatcagcgtgca 591 || || ||||| ||||| || | || | |||||||||| |||||| | ||||| ||| Sbjct: 57318 gacggcggtgcagaggcagacggcggcgtcgaggtcggcgatcccctgcagcagcgagca 57259 Query: 592 gcac 595 |||| Sbjct: 57258 gcac 57255
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 442 gaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcac 501 |||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||| | Sbjct: 468 gaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggatggggag 409 Query: 502 gttgaggttgatgcc 516 ||||||||||||||| Sbjct: 408 gttgaggttgatgcc 394
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | ||||||||||| ||| | Sbjct: 460 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 401 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 400 gcacgttggccttga 386
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||| | Sbjct: 436 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 377 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 376 gcacgttggccttga 362
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 242 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 183 Query: 526 ggccttgagc 535 |||||||||| Sbjct: 182 ggccttgagc 173
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 466 gcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgtt 525 ||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |||| ||| Sbjct: 480 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 421 Query: 526 ggccttga 533 |||||||| Sbjct: 420 ggccttga 413
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 446 ccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttg 505 |||| ||| ||| |||||||||||| ||||| || |||||||||||||| ||||| |||| Sbjct: 458 ccggtgggcacggtcttgccgcagtggttgaggatgaggctgaggtcgacgggcaggttg 399 Query: 506 aggttgat 513 || ||||| Sbjct: 398 agcttgat 391
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||| ||| | || ||| |||||||| | Sbjct: 343 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 284 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 283 gcacgttggccttga 269
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||||||||||||| ||| | || ||| |||||||| | Sbjct: 428 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 369 Query: 519 ggatgttggccttga 533 | | ||||||||||| Sbjct: 368 gcacgttggccttga 354
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| | ||||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 357 gttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatg 300
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| | ||||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 89009 gttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatg 89066
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 457 gttcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| | ||||| || || ||||||||||| ||||| ||||||||||||| Sbjct: 419 gttcttgccgcacttgttgaggatgatgctgaggtcgacgggcaggttgaggttgatg 362
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 462 tgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaagga 521 ||||||||| ||||| || |||| ||||| | |||||||||||||| |||||| |||| Sbjct: 437 tgccgcagttgttgaggatgaggttgaggctaaggggcacgttgaggtggatgccgagga 378 Query: 522 tgttggccttgagcgccgtgcacaggcaca 551 ||||||||||| || ||||| ||||||| Sbjct: 377 cgttggccttgatggcggtgcagaggcaca 348
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| ||||| || ||||||||| |||| ||| | ||||||||||||| Sbjct: 403 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatg 348
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 496 gggcacgttgaggttgatgccaaggatgttggccttgagcgccgtgcacaggcaca 551 |||||||||||||| |||||| |||| ||||||||||| || ||||| ||||||| Sbjct: 341 gggcacgttgaggtggatgccgaggacgttggccttgatggcggtgcagaggcaca 286
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatg 514 |||||||||||| ||||| || ||||||||| |||| ||| | ||||||||||||| Sbjct: 482 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatg 427
>ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggat 522 |||||||||||||| ||||||| |||||||| ||| |||| |||||||| ||| || | Sbjct: 318 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 259 Query: 523 gttggccttga 533 |||||| |||| Sbjct: 258 gttggcgttga 248
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 ||||||||||||| || |||||||| ||||||||| | ||||||||| Sbjct: 458 gggcactggaagctggaggggacgtgcttgccgcactcgttgacgag 412
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 ||||||||||||| || |||||||| ||||||||| | ||||||||| Sbjct: 78189 gggcactggaagctggaggggacgtgcttgccgcactcgttgacgag 78143 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 |||||||||||| ||| ||| |||| ||||||||||| |||||||| Sbjct: 67770 gggcactggaagtcggagggcacgtacttgccgcagtcattgacgag 67724
>gb|AF149815.1| Oryza sativa unknown gene Length = 1293 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggat 522 |||||||||||||| ||||||| |||||||| ||| |||| |||||||| ||| || | Sbjct: 160 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 101 Query: 523 gttggccttga 533 |||||| |||| Sbjct: 100 gttggcgttga 90
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggat 522 |||||||||||||| ||||||| |||||||| ||| |||| |||||||| ||| || | Sbjct: 343474 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 343415 Query: 523 gttggccttga 533 |||||| |||| Sbjct: 343414 gttggcgttga 343404
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggat 522 |||||||||||||| ||||||| |||||||| ||| |||| |||||||| ||| || | Sbjct: 53427 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 53368 Query: 523 gttggccttga 533 |||||| |||| Sbjct: 53367 gttggcgttga 53357
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 ||||||||||||| || |||||||| ||||||||| | ||||||||| Sbjct: 318 gggcactggaagctggaggggacgtgcttgccgcactcgttgacgag 272
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 462 tgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaagga 521 ||||||||| ||||| || |||| ||||| | |||||||| ||||| |||||| |||| Sbjct: 450 tgccgcagttgttgaggatgaggttgaggctaaggggcacgtggaggtggatgccgagga 391 Query: 522 tgttggccttgagcgccgtgcacaggcaca 551 ||||||||||| || ||||| ||||||| Sbjct: 390 cgttggccttgatggcggtgcagaggcaca 361
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 50.1 bits (25), Expect = 0.008 Identities = 76/93 (81%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||||| ||||| || |||| ||||| | ||||| ||||||| |||||| | Sbjct: 446 tcttgccgcagttgttgaggatgaggttgaggctaaggggcatattgaggtggatgccga 387 Query: 519 ggatgttggccttgagcgccgtgcacaggcaca 551 ||| ||||||||||| || ||||| ||||||| Sbjct: 386 ggacgttggccttgatggcggtgcagaggcaca 354
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 502 gttgaggttgatgccaaggatgttggccttga 533 |||||| |||||||| |||||||||||||||| Sbjct: 462 gttgagattgatgccgaggatgttggccttga 431
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 502 gttgaggttgatgccaaggatgttggccttga 533 |||||| |||||||| |||||||||||||||| Sbjct: 483 gttgagattgatgccgaggatgttggccttga 452
>emb|AL732436.6| Zebrafish DNA sequence from clone BUSM1-21A14 in linkage group 9, complete sequence Length = 123962 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 23 attaattactttattacaattgta 46 |||||||||||||||||||||||| Sbjct: 41763 attaattactttattacaattgta 41740
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcgatgggcacgttgaggttgatgccaagga 521 ||||||||| | |||||||||||||||||||| Sbjct: 5860 gtcgatggggatgttgaggttgatgccaagga 5891 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcgatgggcacgttgaggttgatgccaagga 521 ||||||||| | |||||||||||||||||||| Sbjct: 5272 gtcgatggggatgttgaggttgatgccaagga 5303
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgag 480 |||||||||||| ||| ||| |||| ||||||||||| |||||||| Sbjct: 584 gggcactggaagtcggagggcacgtacttgccgcagtcattgacgag 538
>ref|NM_104930.3| Arabidopsis thaliana lipid binding AT1G62510 mRNA, complete cds Length = 821 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 487 aggttgataccgaggatgttagccttgagcgcagtgca 450
>gb|BT010488.1| Arabidopsis thaliana At1g62510 gene, complete cds Length = 450 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 377 aggttgataccgaggatgttagccttgagcgcagtgca 340
>dbj|AK221906.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL22-34-F07 Length = 800 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 460 aggttgataccgaggatgttagccttgagcgcagtgca 423
>dbj|AK221810.1| Arabidopsis thaliana mRNA for similar to 14KD proline-rich protein DC2.15 precursor, complete cds, clone: RAFL21-88-G23 Length = 801 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 460 aggttgataccgaggatgttagccttgagcgcagtgca 423
>gb|S68113.1| proline-rich SAC51 [Brassica napus=oilseed rape, pods, mRNA, 756 nt] Length = 756 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 385 aggttgatcccaaggatgttagccttaagcgcggtgca 348
>emb|BX817278.1|CNS0ACNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 584 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 245 aggttgataccgaggatgttagccttgagcgcagtgca 208
>dbj|AK220631.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL21-51-F08 Length = 805 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 460 aggttgataccgaggatgttagccttgagcgcagtgca 423
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1, complete sequence Length = 97054 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 27693 aggttgataccgaggatgttagccttgagcgcagtgca 27730
>emb|X71618.1|BNPRPPDA B.napus proline-rich mRNA accumulating during pod development Length = 756 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 aggttgatgccaaggatgttggccttgagcgccgtgca 543 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 385 aggttgatcccaaggatgttagccttaagcgcggtgca 348
>ref|XM_481980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggag 483 ||||||||||||||||||||| Sbjct: 117 gccgcagtagttgacgaggag 97
>ref|XM_469883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gacgaggaggctgaggtcgatgggcacgt 503 |||||||||| ||||| |||||||||||| Sbjct: 396 gacgaggaggttgaggccgatgggcacgt 368
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 42.1 bits (21), Expect = 2.1 Identities = 98/124 (79%) Strand = Plus / Minus Query: 472 gttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaaggatgttggcctt 531 ||||| || |||||| || |||| ||| | ||||||||||||||| || | |||||||| Sbjct: 357 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 298 Query: 532 gagcgccgtgcacaggcacaccgncgccttcaggtcggcgagcccctggatcagcgtgca 591 || || ||||| ||||| || | || | |||||||||| |||||| | ||||| ||| Sbjct: 297 gacggcggtgcagaggcagacggcggcgtcgaggtcggcgatcccctgcagcagcgagca 238 Query: 592 gcac 595 |||| Sbjct: 237 gcac 234
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 415 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 356 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 355 gcacgttggcctt 343
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 caccgncgccttcaggtcggcgag 573 ||||| |||||||||||||||||| Sbjct: 2831908 caccgccgccttcaggtcggcgag 2831885
>emb|AL663114.4| Mouse DNA sequence from clone RP23-269C21 on chromosome 11 Contins the 3' end of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 96411 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tgtagatcatgcatgcaggca 350 ||||||||||||||||||||| Sbjct: 58740 tgtagatcatgcatgcaggca 58720
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 475 gacgaggaggctgaggtcgatgggcacgt 503 |||||||||| ||||| |||||||||||| Sbjct: 113970 gacgaggaggttgaggccgatgggcacgt 113942
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggag 483 ||||||||||||||||||||| Sbjct: 16863531 gccgcagtagttgacgaggag 16863511
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggag 483 ||||||||||||||||||||| Sbjct: 76896 gccgcagtagttgacgaggag 76876
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 gccgcagtagttgacgaggag 483 ||||||||||||||||||||| Sbjct: 10542 gccgcagtagttgacgaggag 10522
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 2071 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 2012 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 2011 gcacgttggcctt 1999
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 459 tcttgccgcagtagttgacgaggaggctgaggtcgatgggcacgttgaggttgatgccaa 518 |||||||||| | ||||| || ||| |||| |||| ||| ||||||||||||| ||| | Sbjct: 459 tcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgccga 400 Query: 519 ggatgttggcctt 531 | | ||||||||| Sbjct: 399 gcacgttggcctt 387
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 451 ggggacgttcttgccgcagtagttgacgaggaggct 486 ||||||| |||||| ||||||||||| |||||||| Sbjct: 393 ggggacgcacttgccacagtagttgacaaggaggct 358
>gb|AF216218.1| Rattus norvegicus orphanin FQ receptor gene (OFQR), complete cds, alternatively spliced Length = 8372 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 6015 tgccaaggatgttggccttg 6034
>ref|NM_031569.1| Rattus norvegicus opioid receptor-like 1 (Oprl1), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1153 tgccaaggatgttggccttg 1172
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 acacgcacagatacgtacacgcaacacacata 234 |||| ||||||| | ||||||||||||||||| Sbjct: 175824 acacacacagatgcatacacgcaacacacata 175855
>gb|AY445095.1| Homo sapiens nitric oxide synthase 1 (neuronal) (NOS1) gene, complete cds Length = 152210 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gccaaggatgttggccttga 533 |||||||||||||||||||| Sbjct: 66634 gccaaggatgttggccttga 66615
>gb|AY152731.1| Rattus norvegicus opioid receptor-like 1 receptor mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1047 tgccaaggatgttggccttg 1066
>ref|XM_503036.1| Yarrowia lipolytica CLIB122, YALI0D19536g predicted mRNA Length = 3606 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tggccttgagcgccgtgcac 544 |||||||||||||||||||| Sbjct: 367 tggccttgagcgccgtgcac 348
>emb|AL162718.15| Human DNA sequence from clone RP11-274H24 on chromosome 6, complete sequence Length = 178872 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ttgatgccaaggatgttggc 528 |||||||||||||||||||| Sbjct: 152138 ttgatgccaaggatgttggc 152157
>emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chromosome 9 Contains a ribosomal protein S20 (RPS20) pseudogene and a novel pseudogene, complete sequence Length = 160109 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 ggccttgagcgccgtgcacaggca 549 ||||||||| |||||||||||||| Sbjct: 141471 ggccttgagggccgtgcacaggca 141448
>emb|AL133538.16| Human DNA sequence from clone RP11-550N16 on chromosome 6q26-27 Contains a CpG island, complete sequence Length = 109238 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gtaaattatgaagcaaataa 286 |||||||||||||||||||| Sbjct: 93026 gtaaattatgaagcaaataa 93007
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcatgcgcgtacgtacgtac 367 |||||||||||||||||||| Sbjct: 44518 gcatgcgcgtacgtacgtac 44499
>emb|AJ243430.1|FRU243430 Fugu rubripes PTPRc gene for CD45, exons 1-30 Length = 12293 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cctgcagtggacgacgatgg 402 |||||||||||||||||||| Sbjct: 8636 cctgcagtggacgacgatgg 8617
>emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in linkage group 14, complete sequence Length = 209974 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 cacacgcacagatacgtacacgca 225 |||||||||| ||||||||||||| Sbjct: 13468 cacacgcacatatacgtacacgca 13445
>gb|AE005912.1| Caulobacter crescentus CB15 section 238 of 359 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 565 gtcggcgagcccctggatcagcgtgcagcacg 596 |||| ||||| ||||||||||||||| ||||| Sbjct: 8313 gtcgacgagcgcctggatcagcgtgccgcacg 8282
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 cggcgagcccctggatcagc 586 |||||||||||||||||||| Sbjct: 2550053 cggcgagcccctggatcagc 2550034
>emb|BX677668.10| Zebrafish DNA sequence from clone CH211-141E20 in linkage group 1, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tgtgggtcttgtcttgttgt 423 |||||||||||||||||||| Sbjct: 164536 tgtgggtcttgtcttgttgt 164517
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgtacgtacgtacgtagtat 374 |||||||||||||||||||| Sbjct: 3160460 cgtacgtacgtacgtagtat 3160441
>gb|AC017095.7| Homo sapiens BAC clone RP11-516C4 from 2, complete sequence Length = 183679 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 gaggttgatgccaaggatgt 524 |||||||||||||||||||| Sbjct: 104958 gaggttgatgccaaggatgt 104977
>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence Length = 229269 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 acacgcacagatacgtacacgcaacacacata 234 |||| ||||||| | ||||||||||||||||| Sbjct: 36388 acacacacagatgcatacacgcaacacacata 36419
>gb|AE004949.1| Pseudomonas aeruginosa PAO1, section 510 of 529 of the complete genome Length = 11176 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgttggccttgagcgccgtg 541 |||||||||||||||||||| Sbjct: 7786 tgttggccttgagcgccgtg 7805
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome Length = 12460 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 ctggatcagcgtgcagcacg 596 |||||||||||||||||||| Sbjct: 1506 ctggatcagcgtgcagcacg 1487
>gb|AC068799.14| Homo sapiens 12 BAC RP11-331O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170249 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gccaaggatgttggccttga 533 |||||||||||||||||||| Sbjct: 86019 gccaaggatgttggccttga 86000
>gb|AC093039.3| Homo sapiens BAC clone RP11-51L13 from 2, complete sequence Length = 39280 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctgatgacacatgatattaa 27 |||||||||||||||||||| Sbjct: 18932 ctgatgacacatgatattaa 18951
>gb|AF115267.1| Rattus norvegicus KOR-3A splice variant mRNA, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1109 tgccaaggatgttggccttg 1128
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tggatggattgtagatcatg 340 |||||||||||||||||||| Sbjct: 30051 tggatggattgtagatcatg 30070
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgtacgtacgtacgtagtat 374 |||||||||||||||||||| Sbjct: 36773 cgtacgtacgtacgtagtat 36754
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgtacgtacgtacgtagtat 374 |||||||||||||||||||| Sbjct: 70123 cgtacgtacgtacgtagtat 70104
>emb|Z93108.1|MAZ93108 M.acuminata mRNA; clone pBAN UU70 Length = 785 Score = 40.1 bits (20), Expect = 8.1 Identities = 70/88 (79%) Strand = Plus / Minus Query: 434 gggcactggaagccggcggggacgttcttgccgcagtagttgacgaggaggctgaggtcg 493 ||||||||||| |||| ||| | |||| ||||||||||||| ||| |||||| | | Sbjct: 490 gggcactggaaaccggtgggagccttctnaccgcagtagttgaggaganggctgaagnng 431 Query: 494 atgggcacgttgaggttgatgccaagga 521 ||||| | |||||| | |||||||||| Sbjct: 430 atggggaggttgagatgaatgccaagga 403
>emb|BX936454.25| Zebrafish DNA sequence from clone DKEY-29M11 in linkage group 20, complete sequence Length = 225683 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 atgatattaattactttattacaa 41 |||||| ||||||||||||||||| Sbjct: 16061 atgataataattactttattacaa 16038
>dbj|D16438.1|RATRORC Rattus norvegicus ROR-C mRNA for opioid receptor, complete cds Length = 1817 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1099 tgccaaggatgttggccttg 1118
>gb|L29419.1|RATOPRE Rattus norvegicus opioid receptor mRNA, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1182 tgccaaggatgttggccttg 1201
>gb|L28144.1|RATOPRECEP Rat opioid receptor family mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1219 tgccaaggatgttggccttg 1238
>emb|AL713913.10| Mouse DNA sequence from clone RP23-125F10 on chromosome 2, complete sequence Length = 190485 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggagaactccatccattcca 143 |||||||||||||||||||| Sbjct: 5327 ggagaactccatccattcca 5346
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tggccttgagcgccgtgcac 544 |||||||||||||||||||| Sbjct: 2471425 tggccttgagcgccgtgcac 2471406
>gb|U07871.1|RNU07871 Rattus norvegicus Sprague Dawley G protein-coupled receptor mRNA, complete cds Length = 2354 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1078 tgccaaggatgttggccttg 1097
>gb|L33916.1|RATXOR1A Rattus norvegicus alternatively spliced orphan opiate receptor (XOR1) mRNA, complete cds Length = 2706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1153 tgccaaggatgttggccttg 1172
>gb|U01913.1|RNU01913 Rattus norvegicus Sprague Dawley putative opioid receptor mRNA, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1228 tgccaaggatgttggccttg 1247
>gb|U05239.1|RNU05239 Rattus norvegicus opioid-receptor-like orphan receptor mRNA, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgccaaggatgttggccttg 532 |||||||||||||||||||| Sbjct: 1230 tgccaaggatgttggccttg 1249 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,738,918 Number of Sequences: 3902068 Number of extensions: 5738918 Number of successful extensions: 104297 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 103142 Number of HSP's gapped (non-prelim): 1147 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
