>STT3_YEAST (P39007) Oligosaccharyl transferase STT3 subunit|
          Length = 718

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -2

Query: 301 LTHFE*VFTTHHWMVRIYKLK 239
           L +F+ VFT+ +WMVRIY+LK
Sbjct: 663 LDYFDEVFTSENWMVRIYQLK 683

>STT3_MOUSE (P46978) Oligosaccharyl transferase STT3 subunit homolog (B5)|
           (Integral membrane protein 1)
          Length = 705

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 304 KLTHFE*VFTTHHWMVRIYKLKPQKN 227
           +L   E  +TT HW+VRIYK+K   N
Sbjct: 674 ELDVLEEAYTTEHWLVRIYKVKDLDN 699

>STT3_HUMAN (P46977) Oligosaccharyl transferase STT3 subunit homolog (B5)|
           (Integral membrane protein 1) (TMC)
          Length = 705

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 280 FTTHHWMVRIYKLKPQKN 227
           +TT HW+VRIYK+K   N
Sbjct: 682 YTTEHWLVRIYKVKDLDN 699

>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
           (UbcM4-interacting protein 48)
          Length = 492

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 162 GGRRTHGNEEKQCSILHERLDIVAQLHQAQ 73
           G  +THG+E  +CS   E  DIV Q  QAQ
Sbjct: 327 GDWKTHGSEYYECSRYKENPDIVNQSQQAQ 356

>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
          Length = 493

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 162 GGRRTHGNEEKQCSILHERLDIVAQLHQAQ 73
           G  +THG+E  +CS   E  DIV Q  QAQ
Sbjct: 328 GDWKTHGSEYYECSRYKENPDIVNQSQQAQ 357

>ODPA_YEAST (P16387) Pyruvate dehydrogenase E1 component alpha subunit,|
           mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
          Length = 420

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 84  AVELQYQVSHVKWNIVSLHCHGFFFRPAASVELVLA 191
           AV ++  ++ +   I S  CHGF F   ASV+ VLA
Sbjct: 121 AVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLA 156

>FAS_PNECA (P29251) Folic acid synthesis protein [Includes: Dihydroneopterin|
           aldolase (EC 4.1.2.25) (DHNA) (FASA) (FASB);
           2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
           pyrophosphokinase (EC 2.7.6.3)
           (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
          Length = 740

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 116 KMEHCFSSLPWVLLPPRCKRRTSFGT 193
           K ++CF+ LPW+L P R KR T F T
Sbjct: 666 KSKNCFNGLPWLLGPSR-KRFTGFIT 690

>STT3_CAEEL (P46975) Oligosaccharyl transferase STT3 subunit homolog|
          Length = 757

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 301 LTHFE*VFTTHHWMVRIYKLKPQKN 227
           L + E  +TT +W+VRIYK K   N
Sbjct: 696 LEYIEEAYTTENWLVRIYKRKKLPN 720

>NCAP_IAUDO (P06827) Nucleoprotein|
          Length = 498

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
 Frame = -3

Query: 195 LVPKLVRRLQRG-----------GRRTHGNEEKQCSILHERLDIVAQ 88
           +V +L+R ++RG           GR+T G  E+ C+IL  +    AQ
Sbjct: 189 MVMELIRMIKRGINDRNFWRGENGRKTRGAYERMCNILKGKFQTAAQ 235

>NCAP_IAMEF (Q08041) Nucleoprotein|
          Length = 498

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
 Frame = -3

Query: 195 LVPKLVRRLQRG-----------GRRTHGNEEKQCSILHERLDIVAQ 88
           +V +L+R ++RG           GR+T G  E+ C+IL  +    AQ
Sbjct: 189 MVMELIRMIKRGINDRNFWRGENGRKTRGAYERMCNILKGKFQTAAQ 235

>NCAP_IAMEA (Q08031) Nucleoprotein|
          Length = 498

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
 Frame = -3

Query: 195 LVPKLVRRLQRG-----------GRRTHGNEEKQCSILHERLDIVAQ 88
           +V +L+R ++RG           GR+T G  E+ C+IL  +    AQ
Sbjct: 189 MVMELIRMIKRGINDRNFWRGENGRKTRGAYERMCNILKGKFQTAAQ 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,596,871
Number of Sequences: 219361
Number of extensions: 516831
Number of successful extensions: 1088
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)