ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37b13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 174 bits (88), Expect = 2e-40 Identities = 187/220 (85%) Strand = Plus / Minus Query: 356 cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 415 ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| | Sbjct: 1480 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1421 Query: 416 caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 475 ||| || |||| | | ||| ||| ||| ||| || |||||||||||||||||||||| Sbjct: 1420 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1361 Query: 476 tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 535 ||||||||| |||||||||||| ||||||| ||||||||||| |||||||| |||| || Sbjct: 1360 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1301 Query: 536 tgtacaaaacgctgaagatcttcttctggaactcagaaag 575 |||||| |||| |||||||||||||||||||||||||| Sbjct: 1300 tgtacagaacgtcaaagatcttcttctggaactcagaaag 1261 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gtcctccttgtcaccgctgcttcc 311 |||||||||| ||||||||||||| Sbjct: 1548 gtcctccttgccaccgctgcttcc 1525
>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full insert sequence Length = 2059 Score = 174 bits (88), Expect = 2e-40 Identities = 187/220 (85%) Strand = Plus / Minus Query: 356 cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 415 ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| | Sbjct: 1586 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1527 Query: 416 caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 475 ||| || |||| | | ||| ||| ||| ||| || |||||||||||||||||||||| Sbjct: 1526 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1467 Query: 476 tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 535 ||||||||| |||||||||||| ||||||| ||||||||||| |||||||| |||| || Sbjct: 1466 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1407 Query: 536 tgtacaaaacgctgaagatcttcttctggaactcagaaag 575 |||||| |||| |||||||||||||||||||||||||| Sbjct: 1406 tgtacagaacgtcaaagatcttcttctggaactcagaaag 1367 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gtcctccttgtcaccgctgcttcc 311 |||||||||| ||||||||||||| Sbjct: 1654 gtcctccttgccaccgctgcttcc 1631
>dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E03, full insert sequence Length = 945 Score = 174 bits (88), Expect = 2e-40 Identities = 187/220 (85%) Strand = Plus / Minus Query: 356 cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 415 ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| | Sbjct: 472 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 413 Query: 416 caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 475 ||| || |||| | | ||| ||| ||| ||| || |||||||||||||||||||||| Sbjct: 412 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 353 Query: 476 tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 535 ||||||||| |||||||||||| ||||||| ||||||||||| |||||||| |||| || Sbjct: 352 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 293 Query: 536 tgtacaaaacgctgaagatcttcttctggaactcagaaag 575 |||||| |||| |||||||||||||||||||||||||| Sbjct: 292 tgtacagaacgtcaaagatcttcttctggaactcagaaag 253 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gtcctccttgtcaccgctgcttcc 311 |||||||||| ||||||||||||| Sbjct: 540 gtcctccttgccaccgctgcttcc 517
>emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA Length = 1559 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 454 atgttgggctgcttctctcccttctcaattaaatcaatgatcttgatcttgtatggttcc 513 |||||||||||||||||||||||||| || | |||||| |||||| ||||||| ||| || Sbjct: 1059 atgttgggctgcttctctcccttctcgataacatcaataatcttggtcttgtagggtgcc 1000 Query: 514 aagaacggaatgtcggcgattttgtacaaaacgctgaagatcttcttctggaactcagaa 573 ||||||||||| || || || ||||||| ||| || |||||||||||||| |||||| Sbjct: 999 aagaacggaatatcagcaatcttgtacaggacgtcaaaaatcttcttctggaagtcagaa 940 Query: 574 ag 575 || Sbjct: 939 ag 938 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctccttgtcaccgctgcttcc 311 |||||||||||||| || || ||||||||||| |||||||| Sbjct: 1247 tccttttcatcctctttctcatccttgtcaccactgcttcc 1207
>gb|AY112482.1| Zea mays CL2224_1 mRNA sequence Length = 1661 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 454 atgttgggctgcttctctcccttctcaattaaatcaatgatcttgatcttgtatggttcc 513 |||||||||||||||||||||||||| || | ||||||||||||| | ||||| ||| || Sbjct: 1062 atgttgggctgcttctctcccttctcgataacatcaatgatcttggttttgtagggtgcc 1003 Query: 514 aagaacggaa 523 |||||||||| Sbjct: 1002 aagaacggaa 993
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 488 caatgatcttgatcttgtatggttccaagaacggaatgtcggcgattttgtacaaaacgc 547 |||||||||| ||||||| ||||||||||| |||||||| |||| |||||||| |||| Sbjct: 77488 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 77547 Query: 548 tgaagatcttcttctg 563 |||||||||||||| Sbjct: 77548 caaagatcttcttctg 77563 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 454 atgttgggctgcttctctcccttctcaatta 484 ||||||||||||||||||||||||||||||| Sbjct: 77338 atgttgggctgcttctctcccttctcaatta 77368 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gtcctccttgtcaccgctgcttcc 311 |||||||||| ||||||||||||| Sbjct: 77082 gtcctccttgccaccgctgcttcc 77105
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 488 caatgatcttgatcttgtatggttccaagaacggaatgtcggcgattttgtacaaaacgc 547 |||||||||| ||||||| ||||||||||| |||||||| |||| |||||||| |||| Sbjct: 19922680 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 19922739 Query: 548 tgaagatcttcttctg 563 |||||||||||||| Sbjct: 19922740 caaagatcttcttctg 19922755 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 454 atgttgggctgcttctctcccttctcaatta 484 ||||||||||||||||||||||||||||||| Sbjct: 19922530 atgttgggctgcttctctcccttctcaatta 19922560 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gaaaaagaaaatcacttctag 60 ||||||||||||||||||||| Sbjct: 29575977 gaaaaagaaaatcacttctag 29575997 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gtcctccttgtcaccgctgcttcc 311 |||||||||| ||||||||||||| Sbjct: 19922274 gtcctccttgccaccgctgcttcc 19922297
>gb|AC003007.1|HUAC003007 Human Chromosome 16 BAC clone CIT987SK-A-61E3, complete sequence Length = 113916 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 55248 aaaagaaaaagaaaatcacttcta 55225
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence Length = 117358 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 578 cctctgactcggctgctgcagcctcctcagccttctgctt 617 |||||||||| |||||||| |||| |||||||||||||| Sbjct: 90997 cctctgactcagctgctgcctcctcttcagccttctgctt 90958
>gb|AC009124.8| Homo sapiens chromosome 16 clone RP11-489A11, complete sequence Length = 168268 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 99144 aaaagaaaaagaaaatcacttcta 99167
>gb|AC182429.3| Pan troglodytes BAC clone CH251-654H2 from chromosome 16, complete sequence Length = 173460 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 124752 aaaagaaaaagaaaatcacttcta 124729
>gb|AC120780.32| Pan troglodytes clone rp43-22b16, complete sequence Length = 193047 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 100905 aaaagaaaaagaaaatcacttcta 100882
>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence Length = 200594 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 50578 aaaagaaaaagaaaatcacttcta 50601
>gb|AC106788.3| Homo sapiens chromosome 16 clone RP11-368J21, complete sequence Length = 170613 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 136128 aaaagaaaaagaaaatcacttcta 136151
>gb|AC092119.3| Homo sapiens chromosome 16 clone CTD-2649C14, complete sequence Length = 172206 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 49520 aaaagaaaaagaaaatcacttcta 49543
>gb|AC092375.4| Homo sapiens chromosome 16 clone RP11-645C24, complete sequence Length = 173275 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||||||||||| Sbjct: 143268 aaaagaaaaagaaaatcacttcta 143291
>gb|AC117567.12| Mus musculus chromosome 16, clone RP24-380O24, complete sequence Length = 195972 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctccttgtc 299 ||||||||||||||||||||||| Sbjct: 100330 tcatcctccttgtcctccttgtc 100308
>ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02442) partial mRNA Length = 9570 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 30 tgatacaaaagaaaaagaaaatcactt 56 |||||||||||||||||||||| |||| Sbjct: 8364 tgatacaaaagaaaaagaaaattactt 8390
>emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on chromosome 1 Contains the 5' end of the RIT1 gene for Ras-like without CAAX 1, the gene for a novel protein (KIAA0907), the ARHGEF2 gene for rho/rac guanine nucleotide exchange factor (GEF) 2, four novel genes, the SSR2 gene for signal sequence receptor beta (translocon-associated protein beta), the C1orf6 gene for chromosome 1 open reading frame 6, the gene for mitogen-activated protein-binding protein-interacting protein (MAPBPIP), the RAB25 gene for RAB25 (member RAS oncogene family), the 5' end of the LMNA gene for lamin A/C and three CpG islands, complete sequence Length = 205463 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctccttgtc 299 ||||||||||||||||||||||| Sbjct: 126619 tcatcctccttgtcctccttgtc 126597
>emb|BX021091.1|CNS08OFR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA31BA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 358 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 488 caatgatcttgatcttgtatggt 510 ||||||||||||||||||||||| Sbjct: 39 caatgatcttgatcttgtatggt 61
>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence Length = 206377 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttc 57 |||||||||||||||||||||| Sbjct: 61879 aaaagaaaaagaaaatcacttc 61900
>emb|AL135917.15| Human DNA sequence from clone RP1-83M4 on chromosome 6 Contains the 3' end of the STX11 gene for syntaxin 11 and a tumor protein, translationally-controlled 1 (TPT1) pseudogene. Contains two CpG islands, complete sequence Length = 104228 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttc 57 |||||||||||||||||||||| Sbjct: 43444 aaaagaaaaagaaaatcacttc 43423
>emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2298J14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 127539 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 278 catcctccttgtcctccttgtc 299 |||||||||||||||||||||| Sbjct: 35095 catcctccttgtcctccttgtc 35074
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 tgatacaaaagaaaaagaaaa 50 ||||||||||||||||||||| Sbjct: 119160 tgatacaaaagaaaaagaaaa 119180
>gb|AY821658.1| Diaprepes abbreviatus putative IDGF mRNA, complete cds Length = 1403 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 ggttccaagaacggaatgtcg 528 ||||||||||||||||||||| Sbjct: 178 ggttccaagaacggaatgtcg 158
>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete sequence Length = 198672 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 ctgctgcagcctcctcagcct 610 ||||||||||||||||||||| Sbjct: 4822 ctgctgcagcctcctcagcct 4842
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 ctgctgcagcctcctcagcct 610 ||||||||||||||||||||| Sbjct: 149355 ctgctgcagcctcctcagcct 149375
>gb|AC147922.2| Xenopus tropicalis clone CH216-98P3, complete sequence Length = 171597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 141123 aaaagaaaaagaaaatcactt 141103
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence Length = 157998 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctccttg 297 ||||||||||||||||||||| Sbjct: 114830 tcatcctccttgtcctccttg 114810
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence Length = 190516 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctccttg 297 ||||||||||||||||||||| Sbjct: 58033 tcatcctccttgtcctccttg 58013
>gb|AY812312.1| Schistosoma japonicum SJCHGC08526 protein mRNA, partial cds Length = 1003 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 gtttatttgatacaaaagaaaaagaaaat 51 ||||||| |||||| |||||||||||||| Sbjct: 973 gtttattcgatacacaagaaaaagaaaat 945
>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence Length = 214712 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 56897 aaaagaaaaagaaaatcactt 56917
>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence Length = 166966 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctccttgtc 299 |||||||| |||||||| ||||||||||| Sbjct: 159153 tccttttcctcctccttttcctccttgtc 159125
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 tgatacaaaagaaaaagaaaa 50 ||||||||||||||||||||| Sbjct: 70087 tgatacaaaagaaaaagaaaa 70107
>emb|AL157414.19| Human DNA sequence from clone RP11-560A15 on chromosome 20 Contains two novel genes, the 3' part of the BMP7 for bone morphogenetic protein 7 and a CpG island, complete sequence Length = 124849 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 114588 aaaagaaaaagaaaatcactt 114608
>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43 Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex homolog (Drosophila) (PCNX) pseudogene and the gene for mixed lineage kinase 4 (KIAA1804), complete sequence Length = 118632 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 gacatcacacaaacaacacaa 90 ||||||||||||||||||||| Sbjct: 19451 gacatcacacaaacaacacaa 19471
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gaaaaagaaaatcacttctag 60 ||||||||||||||||||||| Sbjct: 78666 gaaaaagaaaatcacttctag 78686
>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 146735 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcacacaaacaacacaaagct 94 ||||||||||||||||||||| Sbjct: 82061 tcacacaaacaacacaaagct 82081
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 acatcacacaaacaacacaaa 91 ||||||||||||||||||||| Sbjct: 173519 acatcacacaaacaacacaaa 173499
>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence Length = 157944 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 cggctgctgcagcctcctcag 607 ||||||||||||||||||||| Sbjct: 113341 cggctgctgcagcctcctcag 113361
>gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q11, complete sequence Length = 174840 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cggctgctgcagcctcctcag 607 ||||||||||||||||||||| Sbjct: 152055 cggctgctgcagcctcctcag 152035
>gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q11, complete sequence Length = 184929 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cggctgctgcagcctcctcag 607 ||||||||||||||||||||| Sbjct: 132175 cggctgctgcagcctcctcag 132155
>gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q11, complete sequence Length = 168239 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 cggctgctgcagcctcctcag 607 ||||||||||||||||||||| Sbjct: 120301 cggctgctgcagcctcctcag 120281
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatcac 54 ||||||||||||||||||||| Sbjct: 20867369 acaaaagaaaaagaaaatcac 20867389
>gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313P18 map 15q21.2, complete sequence Length = 186253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 atacaaaagaaaaagaaaatc 52 ||||||||||||||||||||| Sbjct: 20182 atacaaaagaaaaagaaaatc 20202
>gb|AC009035.9| Homo sapiens chromosome 16 clone RP11-142A12, complete sequence Length = 132296 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 83579 aaaagaaaaagaaaatcactt 83599
>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence Length = 189712 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 ggctgcttctctcccttctca 480 ||||||||||||||||||||| Sbjct: 120872 ggctgcttctctcccttctca 120892
>emb|BX088561.9| Zebrafish DNA sequence from clone DKEY-257G8 in linkage group 2, complete sequence Length = 190419 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 59461 aaaagaaaaagaaaatcactt 59441
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 caaaagaaaaagaaaatcact 55 ||||||||||||||||||||| Sbjct: 80050 caaaagaaaaagaaaatcact 80070
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatcac 54 ||||||||||||||||||||| Sbjct: 69096 acaaaagaaaaagaaaatcac 69116
>emb|AL121809.6|CNS01DSK Human chromosome 14 DNA sequence BAC C-3028N15 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 213442 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttctag 60 |||||||||| |||||||||||||| Sbjct: 188687 aaaagaaaaaaaaaatcacttctag 188711
>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete sequence Length = 214859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 ctcagaaaggtcctctgactc 587 ||||||||||||||||||||| Sbjct: 18108 ctcagaaaggtcctctgactc 18128
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatcac 54 ||||||||||||||||||||| Sbjct: 20793583 acaaaagaaaaagaaaatcac 20793603
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 acaaaagaaaaagaaaatcac 54 ||||||||||||||||||||| Sbjct: 91626 acaaaagaaaaagaaaatcac 91606
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tgatacaaaagaaaaagaaaa 50 ||||||||||||||||||||| Sbjct: 167719 tgatacaaaagaaaaagaaaa 167699
>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence Length = 187385 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctccttgtc 299 |||||||| |||||||| ||||||||||| Sbjct: 111707 tccttttcctcctccttttcctccttgtc 111679
>emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on chromosome 4, complete sequence Length = 80682 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctccttgtc 299 ||||| || |||||||||||||||||||| Sbjct: 68018 tccttctcctcctccttgtcctccttgtc 67990
>emb|AL772223.7| Mouse DNA sequence from clone RP23-372J10 on chromosome 4, complete sequence Length = 211954 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttctag 60 ||||||||||||||| ||||||||| Sbjct: 60284 aaaagaaaaagaaaaacacttctag 60308
>dbj|AB074499.1| Oryzias latipes FLJ20038, mdGnRH genes for a hypothetical protein FLJ20038, medaka-type gonadotropin-releasing hormone, complete cds Length = 10365 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 1803 aaaagaaaaagaaaatcactt 1823
>gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome 13, complete sequence Length = 208856 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcactt 56 ||||||||||||||||||||| Sbjct: 29864 aaaagaaaaagaaaatcactt 29844
>gb|AC159312.2| Mus musculus BAC clone RP23-156N21 from chromosome 12, complete sequence Length = 205080 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 118496 aaaagaaaaagaaaatcact 118515
>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete sequence Length = 231693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 121143 tcctccttgtcctccttgtc 121124
>ref|NM_004565.1| Homo sapiens peroxisomal biogenesis factor 14 (PEX14), mRNA Length = 1908 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1000 tcatcctcctcatcctcctcgtcctccttgtc 969
>gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctcc 294 |||| ||||||||||||||||||| Sbjct: 76039 tcctcttcatcctccttgtcctcc 76016
>gb|AC100381.9| Mus musculus chromosome 3, clone RP23-132C6, complete sequence Length = 190741 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 tccttttcatcctccttgtcctcc 294 |||| ||||||||||||||||||| Sbjct: 141680 tcctcttcatcctccttgtcctcc 141657
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 610437 aaaagaaaaagaaaatcact 610418
>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence Length = 152664 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 66835 aaaagaaaaagaaaatcact 66854
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 27274 gatacaaaagaaaaagaaaa 27255
>ref|XM_599068.2| PREDICTED: Bos taurus similar to Killer cell immunoglobulin-like receptor 2DS4 precursor (MHC class I NK cell receptor) (Natural killer associated transcript 8) (NKAT-8) (P58 natural killer cell receptor clone CL-39) (p58 NK receptor) (CL-17) (LOC520818), partial mRNA Length = 510 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 8 tcctccttgtcctccttgtc 27
>gb|BC010324.1| Mus musculus immunoglobulin heavy chain (J558 family), mRNA (cDNA clone MGC:6526 IMAGE:2651406), complete cds Length = 1673 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 794 tcctccttgtcctccttgtc 813
>gb|BC004786.1| Mus musculus immunoglobulin heavy chain (J558 family), mRNA (cDNA clone MGC:6727 IMAGE:3588636), complete cds Length = 1588 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 798 tcctccttgtcctccttgtc 817
>gb|BC052921.1| Mus musculus sterile alpha motif domain containing 10, mRNA (cDNA clone MGC:56770 IMAGE:6311715), complete cds Length = 2208 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1717 tcatcctccttgtcctcctt 1698
>ref|XM_863972.1| PREDICTED: Bos taurus similar to 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1), transcript variant 2 (LOC510998), mRNA Length = 2260 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 966 aacaaggatgacagcaactg 985
>ref|XM_871769.1| PREDICTED: Bos taurus similar to 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1), transcript variant 4 (LOC510998), mRNA Length = 1314 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 966 aacaaggatgacagcaactg 985
>ref|XM_588240.2| PREDICTED: Bos taurus similar to 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1), transcript variant 1 (LOC510998), mRNA Length = 2255 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 966 aacaaggatgacagcaactg 985
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 60409 aaaagaaaaagaaaatcact 60428
>ref|NG_005305.1| Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3/GIY-YIG domain containing 1 region (SULT1A3/GIYD1@) on chromosome 16 Length = 152926 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 123871 aaaaaaaaaagaaaatcacttcta 123894
>ref|XM_587514.2| PREDICTED: Bos taurus similar to SP140 nuclear body protein isoform 1 (LOC510377), mRNA Length = 2461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 acaggtgccactgccttctt 383 |||||||||||||||||||| Sbjct: 1126 acaggtgccactgccttctt 1107
>gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chromosome 16, complete sequence Length = 175231 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 101078 aaaaaaaaaagaaaatcacttcta 101055
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tctctcccttctcaattaaa 486 |||||||||||||||||||| Sbjct: 1632855 tctctcccttctcaattaaa 1632874
>gb|AY570924.1| Sinorhizobium meliloti strain B1 plasmid pSymA NodQ1 (nodQ1) gene, partial cds; and nodQ1-nodJ intergenic region, partial sequence Length = 3971 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ctgaagcggcggcaagactg 158 |||||||||||||||||||| Sbjct: 1120 ctgaagcggcggcaagactg 1139
>gb|AC102806.18| Mus musculus chromosome 3, clone RP23-341B15, complete sequence Length = 229984 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 102461 tcctccttgtcctccttgtc 102480
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctcct 295 |||||||| ||||||||||| ||||||| Sbjct: 211094 tcatccttctcatcctccttttcctcct 211067
>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence Length = 217116 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cacacaaacaacacaaagcttcac 98 |||||||||| ||||||||||||| Sbjct: 109826 cacacaaacagcacaaagcttcac 109849
>gb|AC011309.5| Homo sapiens BAC clone CTD-2503O24 from 7, complete sequence Length = 112863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 27657 aaaagaaaaagaaaatcact 27638
>gb|AC004855.1| Homo sapiens PAC clone RP4-673O11 from 7, complete sequence Length = 74816 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 11587 aaaagaaaaagaaaatcact 11606
>gb|AC127457.3| Homo sapiens chromosome 16 clone RP11-100F10, complete sequence Length = 86390 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 14765 aaaaaaaaaagaaaatcacttcta 14788
>gb|AC106745.4| Homo sapiens chromosome 16 clone RP11-134D3, complete sequence Length = 164238 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cttcacaggtgccactgcct 379 |||||||||||||||||||| Sbjct: 75292 cttcacaggtgccactgcct 75311
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence Length = 169661 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 60571 tcctccttgtcctccttgtc 60552
>gb|DQ484024.1| Gymnogyps californianus clone 190G microsatellite sequence Length = 768 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tcatccttttcatcctcctt 287 |||||||||||||||||||| Sbjct: 354 tcatccttttcatcctcctt 335
>gb|DQ483941.1| Gymnogyps californianus clone 107G microsatellite sequence Length = 520 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tcatccttttcatcctcctt 287 |||||||||||||||||||| Sbjct: 348 tcatccttttcatcctcctt 329
>gb|DQ483422.1| Gymnogyps californianus clone 125H microsatellite sequence Length = 526 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tcatccttttcatcctcctt 287 |||||||||||||||||||| Sbjct: 354 tcatccttttcatcctcctt 335
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 75780 aaagaaaaagaaaatcactt 75761
>ref|XM_383889.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03713.1) partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 962 tcctccttgtcctccttgtc 943
>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete sequence Length = 199938 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 69375 aaaagaaaaagaaaatcact 69356
>gb|AC078855.13| Homo sapiens 3 BAC RP11-558M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cacagtaacaaggatgacag 427 |||||||||||||||||||| Sbjct: 153507 cacagtaacaaggatgacag 153488
>gb|AC124692.3| Mus musculus BAC clone RP24-159H19 from chromosome 3, complete sequence Length = 180230 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 128295 aaaagaaaaagaaaatcact 128276
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 175053 gatacaaaagaaaaagaaaa 175034
>ref|XM_644880.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (255.t00003) partial mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agtttatttgatacaaaagaaaaa 45 ||||||||||||| |||||||||| Sbjct: 514 agtttatttgataaaaaagaaaaa 537
>ref|XM_646008.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (183.t00015) partial mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agtttatttgatacaaaagaaaaa 45 ||||||||||||| |||||||||| Sbjct: 514 agtttatttgataaaaaagaaaaa 537
>ref|XM_646921.1| Entamoeba histolytica HM-1:IMSS splicing factor 3B subunit 3, putative (136.t00018) partial mRNA Length = 3438 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atttgatacaaaagaaaaag 46 |||||||||||||||||||| Sbjct: 930 atttgatacaaaagaaaaag 949
>gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 56623 tcctccttgtcctccttgtc 56604 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 56614 tcctccttgtcctccttgtc 56595
>gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete sequence Length = 105891 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatcacttc 57 |||||| ||||||||||||||||| Sbjct: 81684 acaaaataaaaagaaaatcacttc 81707
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 63078 tcctccttgtcctccttgtc 63097
>gb|AC073418.6| Homo sapiens BAC clone RP11-334C6 from 7, complete sequence Length = 83743 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 tttatttgatacaaaagaaaaagaaaat 51 ||||||| ||| |||||||||||||||| Sbjct: 51399 tttatttaataaaaaagaaaaagaaaat 51426
>gb|AC073130.3| Homo sapiens BAC clone RP11-667F14 from 7, complete sequence Length = 203403 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 acaaaagaaaaagaaaatca 53 |||||||||||||||||||| Sbjct: 42420 acaaaagaaaaagaaaatca 42401
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacacaaacaacacaaagcttcac 98 |||||||||| ||||||||||||| Sbjct: 53848 cacacaaacagcacaaagcttcac 53825
>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence Length = 214272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 141273 aaaagaaaaagaaaatcact 141254
>gb|AC145774.1| Pan troglodytes BAC clone RP43-160F1 from 7, complete sequence Length = 208178 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 172662 aaaagaaaaagaaaatcact 172643
>emb|CR633543.2|CNS0ENT9 Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>emb|CR632997.2|CNS0ENE3 Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>emb|CR632121.2|CNS0EMPR Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>emb|CR631928.2|CNS0EMKE Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>emb|CR631349.2|CNS0EM4A Tetraodon nigroviridis full-length cDNA Length = 479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>emb|CR631561.2|CNS0EMA7 Tetraodon nigroviridis full-length cDNA Length = 479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 163 tcctccttgtcctccttgtc 144
>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence Length = 199388 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 141339 tcctccttgtcctccttgtc 141358
>gb|BC055919.1| Mus musculus cDNA clone IMAGE:4017147, **** WARNING: chimeric clone **** Length = 1551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 762 tcctccttgtcctccttgtc 781
>gb|AC106782.5| Homo sapiens chromosome 16 clone RP11-347C12, complete sequence Length = 181001 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 115945 aaaaaaaaaagaaaatcacttcta 115968
>gb|BC014254.2| Homo sapiens cDNA clone IMAGE:4634739, partial cds Length = 2162 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaatcac 54 ||||||||||||| |||||||||| Sbjct: 1719 gatacaaaagaaacagaaaatcac 1742
>gb|BC114821.1| Bos taurus cDNA clone MGC:140309 IMAGE:8185806, complete cds Length = 1489 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 acaggtgccactgccttctt 383 |||||||||||||||||||| Sbjct: 1105 acaggtgccactgccttctt 1086
>emb|AL589951.6| Human DNA sequence from clone RP11-55F17 on chromosome 13, complete sequence Length = 55627 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 48855 gatacaaaagaaaaagaaaa 48836
>emb|AL356265.10| Human DNA sequence from clone RP13-83C14 on chromosome X Contains a YWHA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein pseudogene and a keratin 8 (KRT8) pseudogene, complete sequence Length = 165609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 24041 aaaagaaaaagaaaatcact 24060
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 38430 tcatcctcctcatcctcctcgtcctccttgtc 38399
>emb|AL157774.14| Human DNA sequence from clone RP11-442L12 on chromosome 6 Contains part of the PKHD1 gene for polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1, FCYT, ARPKD) and a CpG island, complete sequence Length = 154055 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 catcctccttgtcctccttg 297 |||||||||||||||||||| Sbjct: 138534 catcctccttgtcctccttg 138553
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||||||||||||||| ||||||| Sbjct: 17753 aaaagaaaaagaaaatgacttcta 17776
>emb|AL049610.9|HS1055C14 Human DNA sequence from clone RP5-1055C14 on chromosome Xq22.1-22.3 Contains the TCEAL1 gene for transcription elongation factor A (SII)-like 1, a novel gene, a novel pseudogene (LOC139779), the MORF4L2 gene for mortality factor 4 like 2, a novel gene, the 3' end of a gene for the possible ortholog of mouse glycine receptor alpha 4 subunit (GLRA4) and a novel gene (MGC39655), complete sequence Length = 100269 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 atacaaaagaaaaagaaaat 51 |||||||||||||||||||| Sbjct: 18176 atacaaaagaaaaagaaaat 18157
>emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16 on chromosome 6q24 Contains GSS, complete sequence Length = 87552 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 29702 aaaagaaaaagaaaatcact 29721
>gb|AE014266.1| Streptococcus agalactiae 2603V/R section 76 of 100 of the complete genome Length = 23817 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tctctcccttctcaattaaa 486 |||||||||||||||||||| Sbjct: 1682 tctctcccttctcaattaaa 1701
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the Vamp2 gene for vesicle-associated membrane 2, the Per1 gene for period homolog 1 (Drosophila), the Hes7 gene for hairy and enhancer of split 7 (Drosophila), the Aloxe3 gene for arachidonate lipoxygenase 3, the Alox12b gene for arachidonate 12-lipoxygenase 12R type, the Alox15b gene for arachidonate 15-lipoxygenase second type, the Gucy2e gene for guanylate cyclase 2e, a novel gene, the gene for LYST-interacting protein LIP8 (Lip8-pending), the gene for the likely ortholog of H. sapiens trafficking protein particle complex 1 (TRAPPC1)), the Kcnab3 gene for potassium voltage-gated channel shaker-related subfamily beta member 3, a novel gene, the 3' end of the Chd3 gene for chromodomain helicase DNA binding protein 3 and six CpG islands, complete sequence Length = 261224 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 tcttctggaactcagaaagg 576 |||||||||||||||||||| Sbjct: 44405 tcttctggaactcagaaagg 44424
>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10 Length = 174050 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tctctcccttctcaattaaa 486 |||||||||||||||||||| Sbjct: 108336 tctctcccttctcaattaaa 108355
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9 Length = 85710 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tttgatacaaaagaaaaaga 47 |||||||||||||||||||| Sbjct: 12277 tttgatacaaaagaaaaaga 12296
>emb|AJ242574.1|SME242574 Sinorhizobium meliloti Insertion sequence isrm10-2 strain CE31A Length = 2194 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ctgaagcggcggcaagactg 158 |||||||||||||||||||| Sbjct: 614 ctgaagcggcggcaagactg 633
>gb|AC084053.6| Mus Musculus Strain C57BL6/J chromosome 3 BAC, RP23-158F1, complete sequence Length = 199415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 152971 aaaagaaaaagaaaatcact 152990
>emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in linkage group 14, complete sequence Length = 75430 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 69793 aaagaaaaagaaaatcactt 69812
>gb|AY129465.1| Homo sapiens polycystic kidney and hepatic disease 1 (PKHD1) gene, complete cds, alternatively spliced Length = 469514 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 catcctccttgtcctccttg 297 |||||||||||||||||||| Sbjct: 265266 catcctccttgtcctccttg 265247
>emb|AJ720634.1| Gallus gallus mRNA for hypothetical protein, clone 22d9 Length = 2601 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 697 aacaaggatgacagcaactg 716
>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence Length = 110295 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 26286 aaagaaaaagaaaatcactt 26305
>ref|NM_001007917.1| Gallus gallus membrane protein, palmitoylated 1, 55kDa (MPP1), mRNA Length = 2601 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 697 aacaaggatgacagcaactg 716
>gb|AC027317.6| Homo sapiens chromosome 5 clone CTC-340P19, complete sequence Length = 112365 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 39994 aaaagaaaaagaaaatcact 40013
>emb|CR450716.5| Zebrafish DNA sequence from clone DKEYP-84G1 in linkage group 18, complete sequence Length = 193900 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 aaatcaatgatcttgatctt 503 |||||||||||||||||||| Sbjct: 24739 aaatcaatgatcttgatctt 24758
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gcggcggcaagactgttcga 163 |||||||||||||||||||| Sbjct: 1084430 gcggcggcaagactgttcga 1084411
>emb|CR613663.1| full-length cDNA clone CS0DI026YH02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1410 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 552 tcatcctcctcatcctcctcgtcctccttgtc 521
>gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endoribonuclease RNA (RMRP) gene, complete sequence Length = 187856 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 gatacaaaagaaaaagaaaatcac 54 ||||||||||||| |||||||||| Sbjct: 28005 gatacaaaagaaacagaaaatcac 27982
>dbj|AK094415.1| Homo sapiens cDNA FLJ37096 fis, clone BRACE2018759 Length = 1873 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaatcac 54 ||||||||||||| |||||||||| Sbjct: 1448 gatacaaaagaaacagaaaatcac 1471
>emb|CR601822.1| full-length cDNA clone CS0DC027YC08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1854 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 962 tcatcctcctcatcctcctcgtcctccttgtc 931
>emb|CR601012.1| full-length cDNA clone CS0DL012YF13 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1219 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1000 tcatcctcctcatcctcctcgtcctccttgtc 969
>emb|CR599838.1| full-length cDNA clone CS0DI068YI22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1837 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 990 tcatcctcctcatcctcctcgtcctccttgtc 959
>gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Cancer Institute) complete sequence Length = 241278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 61386 aaagaaaaagaaaatcactt 61367
>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete sequence Length = 194406 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 57449 aaaaaaaaaagaaaatcacttcta 57472
>emb|BX769174.7| Zebrafish DNA sequence from clone DKEY-246O14, complete sequence Length = 187545 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 aaatcaatgatcttgatctt 503 |||||||||||||||||||| Sbjct: 180910 aaatcaatgatcttgatctt 180891
>dbj|AK002194.1| Homo sapiens cDNA FLJ11332 fis, clone PLACE1010599, highly similar to Homo sapiens Pex14 mRNA for peroxisomal membrane anchor protein Length = 1912 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1008 tcatcctcctcatcctcctcgtcctccttgtc 977
>gb|AC092888.4| Homo sapiens 12 BAC RP11-597C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169071 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 atacaaaagaaaaagaaaat 51 |||||||||||||||||||| Sbjct: 91942 atacaaaagaaaaagaaaat 91961
>gb|AC007996.11| Homo sapiens chromosome 18, clone RP11-9E17, complete sequence Length = 182884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tttatttgatacaaaagaaa 43 |||||||||||||||||||| Sbjct: 92160 tttatttgatacaaaagaaa 92179
>dbj|AK142609.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730010N08 product:Ig alpha chain C region homolog [Mus musculus], full insert sequence Length = 1541 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 752 tcctccttgtcctccttgtc 771
>dbj|AK136471.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030611D02 product:immunoglobulin heavy chain (J558 family), full insert sequence Length = 2959 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 799 tcctccttgtcctccttgtc 818
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cttcacaggtgccactgcct 379 |||||||||||||||||||| Sbjct: 132655 cttcacaggtgccactgcct 132674
>ref|NM_172676.2| Mus musculus sterile alpha motif domain containing 10 (Samd10), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1717 tcatcctccttgtcctcctt 1698
>dbj|AK164204.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630049C13 product:hypothetical SAM domain profile/Sterile alpha motif homology containing protein, full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1757 tcatcctccttgtcctcctt 1738
>dbj|AK171151.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228D08 product:weakly similar to Hypothetical SAM domain [Mus musculus], full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1723 tcatcctccttgtcctcctt 1704
>gb|AY045742.1|AY045741S2 Mus musculus immunoglobulin alpha heavy chain constant region (Igh-2) gene, Igh-2b allotype, exon 2 Length = 336 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 8 tcctccttgtcctccttgtc 27
>dbj|AK162985.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430024D02 product:unclassifiable, full insert sequence Length = 4045 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 1176 gatacaaaagaaaaagaaaa 1157
>emb|CR542083.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0137D for gene PEX14, peroxisomal biogenesis factor 14; complete cds, incl. stopcodon Length = 1134 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 995 tcatcctcctcatcctcctcgtcctccttgtc 964
>gb|AC009086.6| Homo sapiens chromosome 16 clone RP11-368N21, complete sequence Length = 201155 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 77323 aaaaaaaaaagaaaatcacttcta 77346
>emb|CR450321.1| Homo sapiens full open reading frame cDNA clone RZPDo834G031D for gene PEX14, peroxisomal biogenesis factor 14; complete cds; without stopcodon Length = 1131 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 995 tcatcctcctcatcctcctcgtcctccttgtc 964
>gb|AC027314.5| Homo sapiens chromosome 5 clone CTC-286C20, complete sequence Length = 150668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 147423 aaaagaaaaagaaaatcact 147442
>gb|AC156275.6| Mus musculus 10 BAC RP24-192F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160348 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctcct 295 |||||||| ||||||||||| ||||||| Sbjct: 61050 tcatccttctcatcctccttttcctcct 61023
>gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 120443 tcctccttgtcctccttgtc 120462 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 120434 tcctccttgtcctccttgtc 120453
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 atacaaaagaaaaagaaaat 51 |||||||||||||||||||| Sbjct: 1707499 atacaaaagaaaaagaaaat 1707480
>gb|AC010633.8| Homo sapiens chromosome 5 clone CTD-2317K6, complete sequence Length = 195931 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatca 53 |||||||||||||||||||| Sbjct: 49197 acaaaagaaaaagaaaatca 49216
>dbj|AK002875.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610041A01 product:IG ALPHA CHAIN C REGION homolog [Mus musculus], full insert sequence Length = 1384 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 610 tcctccttgtcctccttgtc 629
>dbj|AK007826.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810048H17 product:similar to Ig heavy chain precursor [Mus musculus], full insert sequence Length = 1524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 757 tcctccttgtcctccttgtc 776
>tpg|BK001427.1| TPA: TPA_exp: Homo sapiens NOELIN1 (OLFM1) gene, complete cds; alternatively spliced Length = 47757 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 tcatccttttcatcctccttgtcctcct 295 ||||||| |||||||||||| ||||||| Sbjct: 21864 tcatcctcttcatcctccttttcctcct 21891
>dbj|AK053884.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318E08 product:hypothetical protein, full insert sequence Length = 1681 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1298 tcatcctccttgtcctcctt 1279
>gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162118 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaaagaaaatcacttctag 60 |||||||||||||||||||| Sbjct: 117589 aaaaagaaaatcacttctag 117608
>dbj|AK053048.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930033N23 product:hypothetical protein, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 1670 tcatcctccttgtcctcctt 1651
>gb|BC092056.1| Mus musculus immunoglobulin heavy chain (J558 family), mRNA (cDNA clone MGC:102606 IMAGE:4013094), complete cds Length = 1564 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 774 tcctccttgtcctccttgtc 793
>gb|AC139264.2| Homo sapiens chromosome 16 clone RP11-1353E1, complete sequence Length = 231174 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 46918 aaagaaaaagaaaatcactt 46899
>gb|AC093777.4| Homo sapiens BAC clone RP11-166N24 from 4, complete sequence Length = 116938 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acaaaagaaaaagaaaatca 53 |||||||||||||||||||| Sbjct: 57277 acaaaagaaaaagaaaatca 57296
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 1118909 aaagaaaaagaaaatcactt 1118928
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cttcacaggtgccactgcct 379 |||||||||||||||||||| Sbjct: 229730 cttcacaggtgccactgcct 229749
>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence Length = 176316 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 16280 aaaagaaaaagaaaatcact 16261
>gb|AC158650.7| Mus musculus 6 BAC RP23-280O4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193965 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 caaaagaaaaagaaaatcac 54 |||||||||||||||||||| Sbjct: 102182 caaaagaaaaagaaaatcac 102163
>gb|AC147976.3| Pan troglodytes BAC clone CH251-543E22 from chromosome 7, complete sequence Length = 231294 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 20235 aaaagaaaaagaaaatcact 20254
>gb|AC009167.9| Homo sapiens chromosome 16 clone RP11-82O18, complete sequence Length = 193633 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagaaaaagaaaatcactt 56 |||||||||||||||||||| Sbjct: 38604 aaagaaaaagaaaatcactt 38623
>gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, complete sequence Length = 116478 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 61513 aaaaaaaaaagaaaatcacttcta 61536
>gb|AC091902.2| Homo sapiens chromosome 5 clone RP11-16L24, complete sequence Length = 188877 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 cggctgctgcagcctcctca 606 |||||||||||||||||||| Sbjct: 120334 cggctgctgcagcctcctca 120315
>gb|AF288038.1|AF288038 Streptococcus thermophilus putative oxidoreductase gene, complete cds; and putative HsdR gene, partial cds Length = 3292 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ccttgtcctccttgtcaccg 303 |||||||||||||||||||| Sbjct: 655 ccttgtcctccttgtcaccg 636
>gb|AC092786.3| Homo sapiens BAC clone RP11-116M1 from 2, complete sequence Length = 97984 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 65595 aaaagaaaaagaaaatcact 65576
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete sequence Length = 88643 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 tgatacaaaagaaaaagaaaatca 53 |||||||||||||||| ||||||| Sbjct: 42372 tgatacaaaagaaaaaaaaaatca 42349
>gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, complete sequence Length = 135160 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ttcatcctccttgtcctcct 295 |||||||||||||||||||| Sbjct: 54793 ttcatcctccttgtcctcct 54774
>dbj|AK218993.1| Mus musculus cDNA, clone:Y2G0147A04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060173, based on BLAT search Length = 398 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 361 tcatcctccttgtcctcctt 342
>dbj|AB105684.1| Bovine viral diarrhea virus 1 gene for structural glycoprotein E2, partial cds, isolate: IS26 NCP/01 Length = 420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 accttctgcgtggtgcagcc 264 |||||||||||||||||||| Sbjct: 101 accttctgcgtggtgcagcc 82
>dbj|AB105683.1| Bovine viral diarrhea virus 1 gene for structural glycoprotein E2, partial cds, isolate: IS25 CP/01 Length = 420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 accttctgcgtggtgcagcc 264 |||||||||||||||||||| Sbjct: 101 accttctgcgtggtgcagcc 82
>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3, complete sequence Length = 183435 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 27152 tcctccttgtcctccttgtc 27171
>gb|AY893549.1| Synthetic construct Homo sapiens clone FLH131159.01X peroxisomal biogenesis factor 14 (PEX14) mRNA, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 995 tcatcctcctcatcctcctcgtcctccttgtc 964
>gb|AF143444.1|AF143444 Sinorhizobium meliloti plasmid pSym insertion sequence ISRm10 transposase homolog gene, complete cds Length = 1055 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ctgaagcggcggcaagactg 158 |||||||||||||||||||| Sbjct: 476 ctgaagcggcggcaagactg 495
>gb|AF029747.1|AF029747 Mus musculus IgA hinge/CH2 (Igh-A (Ig-2)) gene, partial cds Length = 485 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 172 tcctccttgtcctccttgtc 191
>gb|BC006327.2| Homo sapiens peroxisomal biogenesis factor 14, mRNA (cDNA clone MGC:12767 IMAGE:4138822), complete cds Length = 1936 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1007 tcatcctcctcatcctcctcgtcctccttgtc 976
>gb|AC154439.2| Mus musculus BAC clone RP23-182C9 from 13, complete sequence Length = 198048 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaatcac 54 |||| ||||||||||||||||||| Sbjct: 69669 gataaaaaagaaaaagaaaatcac 69692
>emb|AL844529.10| Mouse DNA sequence from clone RP23-138J20 on chromosome 2, complete sequence Length = 132763 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcatcctccttgtcctcctt 296 |||||||||||||||||||| Sbjct: 34974 tcatcctccttgtcctcctt 34993
>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174933 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 66103 aaaagaaaaagaaaatcact 66122
>dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-673F18, complete sequence Length = 186084 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ggctgcttctctcccttctc 479 |||||||||||||||||||| Sbjct: 2499 ggctgcttctctcccttctc 2480
>dbj|AP000977.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-730K11, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcacttcta 59 |||| ||||||||||||||||||| Sbjct: 138827 aaaaaaaaaagaaaatcacttcta 138804
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaacaacacaaagcttcacc 99 |||||||||||||||||||| Sbjct: 12475 aaacaacacaaagcttcacc 12494
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aacaaggatgacagcaactg 433 |||||||||||||||||||| Sbjct: 37441 aacaaggatgacagcaactg 37422
>emb|BX284690.3| Mouse DNA sequence from clone RP24-422L8 on chromosome X, complete sequence Length = 87350 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 20696 gatacaaaagaaaaagaaaa 20715
>gb|AF045186.1|AF045186 Homo sapiens peroxisomal membrane anchor protein HsPex14p (PEX14) mRNA, complete cds Length = 1247 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1000 tcatcctcctcatcctcctcgtcctccttgtc 969
>emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on chromosome 4, complete sequence Length = 146547 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 agaaaaagaaaatcacttct 58 |||||||||||||||||||| Sbjct: 137188 agaaaaagaaaatcacttct 137207
>gb|AF043636.1|AF043636 Plasmodium chabaudi circumsporozoite protein (CS) gene, partial cds Length = 1541 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 938 tcctccttgtcctccttgtc 919
>emb|AL390778.31| Human DNA sequence from clone RP11-399H11 on chromosome 9 Contains the 3' end of the OLFM1 gene for olfactomedin 1, two putative novel transcripts and two CpG islands, complete sequence Length = 221372 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctcct 295 ||||||| |||||||||||| ||||||| Sbjct: 205490 tcatcctcttcatcctccttttcctcct 205463
>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains the TEX13B gene for testis expressed sequence 13B, a novel pseudogene, the 3' end of the MID2 gene for midline 2 (FXY2, RNF60, TRIM1), a novel gene and a CpG island, complete sequence Length = 118456 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ttctgaagagcacagtaaca 417 |||||||||||||||||||| Sbjct: 10165 ttctgaagagcacagtaaca 10184
>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3 Contains the 3' end of the CA9 gene for carbonic anhydrase IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1, TMSB, AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027), the CREB3 gene for cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene for glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054), a novel gene (KIAA0258), five novel genes, the NPR2 gene for natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene for sperm associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1, MGC26201), the HINT2 gene for Histidine triad nucleotide binding protein 2, the gene for NAG-5 protein (LOC51754), an olfactory receptor pseudogene, the gene for a novel seven transmembrane helix receptor, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5,13kDa (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B) (NDUFA5) pseudogene and six CpG islands, complete sequence Length = 195379 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaatcac 54 ||||||||||||| |||||||||| Sbjct: 83336 gatacaaaagaaacagaaaatcac 83359
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaagaaaaagaaaatcact 55 |||||||||||||||||||| Sbjct: 107419 aaaagaaaaagaaaatcact 107400
>emb|CT025570.7| Mouse DNA sequence from clone RP24-82O4 on chromosome 14, complete sequence Length = 232110 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgatacaaaagaaaaagaaa 49 |||||||||||||||||||| Sbjct: 132070 tgatacaaaagaaaaagaaa 132089
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 attaaatcaatgatcttgat 500 |||||||||||||||||||| Sbjct: 102843 attaaatcaatgatcttgat 102824
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaa 50 |||||||||||||||||||| Sbjct: 207222 gatacaaaagaaaaagaaaa 207241
>emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chromosome X, complete sequence Length = 227581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 61967 tcctccttgtcctccttgtc 61986 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 61958 tcctccttgtcctccttgtc 61977
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 ttctgaagagcacagtaaca 417 |||||||||||||||||||| Sbjct: 66175 ttctgaagagcacagtaaca 66156
>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete sequence Length = 212472 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 111340 tcctccttgtcctccttgtc 111359
>emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chromosome X, complete sequence Length = 197111 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 194878 tcctccttgtcctccttgtc 194897
>dbj|AB049900.1| Macaca fascicularis brain cDNA, clone:QnpA-19713 Length = 1823 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gatacaaaagaaaaagaaaatcac 54 ||||||||||||| |||||||||| Sbjct: 1328 gatacaaaagaaatagaaaatcac 1351
>dbj|AB017546.1| Homo sapiens Pex14 mRNA for peroxisomal membrane anchor protein, complete cds Length = 1908 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 tcatccttttcatcctccttgtcctccttgtc 299 ||||||| |||||||||| |||||||||||| Sbjct: 1000 tcatcctcctcatcctcctcgtcctccttgtc 969
>emb|AL672157.5| Mouse DNA sequence from clone RP24-499M12 on chromosome 2, complete sequence Length = 67987 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tcctccttgtcctccttgtc 299 |||||||||||||||||||| Sbjct: 44884 tcctccttgtcctccttgtc 44903 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,338,697 Number of Sequences: 3902068 Number of extensions: 7338697 Number of successful extensions: 311116 Number of sequences better than 10.0: 223 Number of HSP's better than 10.0 without gapping: 224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 309632 Number of HSP's gapped (non-prelim): 1483 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
