ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36m11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence 66 4e-08
2gb|AY104181.1| Zea mays PCO060230 mRNA sequence 66 4e-08
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-05
4dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 4e-05
6emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 56 4e-05
7ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predic... 46 0.039
8gb|BT016303.1| Zea mays clone Contig136 mRNA sequence 46 0.039
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.039
10dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
11gb|AY103581.1| Zea mays PCO136340 mRNA sequence 46 0.039
12emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.039
13emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 46 0.039
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
15dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
16dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
17dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
18dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
19gb|AC146508.3| Pan troglodytes BAC clone RP43-172A15 from 7, com... 42 0.62
20gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, co... 42 0.62
21gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, comp... 40 2.4
22gb|AY303814.1| Takifugu rubripes IFI56 (IFI56) gene, complete cds 40 2.4
23gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, com... 40 2.4
24gb|AC005279.1|AC005279 Homo sapiens chromosome 17, clone hRPK.10... 40 2.4
25gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, com... 38 9.6
26ref|NM_201778.1| Arabidopsis thaliana ATP binding / shikimate ki... 38 9.6
27ref|NM_127763.2| Arabidopsis thaliana ATP binding / shikimate ki... 38 9.6
28gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, comp... 38 9.6
29gb|AC115869.9| Mus musculus chromosome 1, clone RP24-330M24, com... 38 9.6
30emb|BX957337.7| Zebrafish DNA sequence from clone DKEY-211E8 in ... 38 9.6
31emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chro... 38 9.6
32emb|AL353611.19| Human DNA sequence from clone RP11-447M12 on ch... 38 9.6
33ref|NM_001039817.1| Danio rerio bone morphogenetic protein recep... 38 9.6
34gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map ... 38 9.6
35gb|AC025741.5| Homo sapiens BAC clone RP11-501E14 from 4, comple... 38 9.6
36gb|DQ002898.1| Danio rerio BMP type IIa receptor (bmpr2a) mRNA, ... 38 9.6
37gb|DQ257434.1| Uncultured organism HF70_19B12, complete sequence 38 9.6
38gb|AC016145.28|AC016145 Homo sapiens 12 BAC RP13-81N3 (Roswell P... 38 9.6
39emb|BX819483.1|CNS0A8WO Arabidopsis thaliana Full-length cDNA Co... 38 9.6
40emb|BX819460.1|CNS0A8WI Arabidopsis thaliana Full-length cDNA Co... 38 9.6
41emb|BX821284.1|CNS0A8C5 Arabidopsis thaliana Full-length cDNA Co... 38 9.6
42dbj|AK118899.2| Arabidopsis thaliana At2g21940 mRNA for putative... 38 9.6
43ref|XM_318507.2| Anopheles gambiae str. PEST ENSANGP00000021188 ... 38 9.6
44ref|XM_554240.1| Anopheles gambiae str. PEST ENSANGP00000026568 ... 38 9.6
45gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23,... 38 9.6
46gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete... 38 9.6
47gb|AC004477.1|AC004477 Homo sapiens chromosome 17, clone HRPC890... 38 9.6
48gb|AC005243.1|AC005243 Homo sapiens chromosome 17, clone hRPK.11... 38 9.6
49emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9... 38 9.6
50gb|AC147360.5| Mus musculus BAC clone RP24-241D11 from chromosom... 38 9.6
51emb|AL627323.6| Mouse DNA sequence from clone RP23-477G24 on chr... 38 9.6 
>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence
          Length = 822

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 155 acactncgctagaagaatgtcccttctggaggctgcacta 194
           ||||| || |||||||||||||||||||||||||||||||
Sbjct: 601 acacttcgttagaagaatgtcccttctggaggctgcacta 562
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>gb|AY104181.1| Zea mays PCO060230 mRNA sequence
          Length = 1061

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 155 acactncgctagaagaatgtcccttctggaggctgcacta 194
           ||||| || |||||||||||||||||||||||||||||||
Sbjct: 720 acacttcgttagaagaatgtcccttctggaggctgcacta 681
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 163      ctagaagaatgtcccttctggaggctgcacta 194
                ||||||||||||||| ||||||||||||||||
Sbjct: 25592752 ctagaagaatgtcccctctggaggctgcacta 25592783
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>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full
           insert sequence
          Length = 924

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 163 ctagaagaatgtcccttctggaggctgcacta 194
           ||||||||||||||| ||||||||||||||||
Sbjct: 642 ctagaagaatgtcccctctggaggctgcacta 611
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 163      ctagaagaatgtcccttctggaggctgcacta 194
                ||||||||||||||| ||||||||||||||||
Sbjct: 25520928 ctagaagaatgtcccctctggaggctgcacta 25520959
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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 163   ctagaagaatgtcccttctggaggctgcacta 194
             ||||||||||||||| ||||||||||||||||
Sbjct: 80966 ctagaagaatgtcccctctggaggctgcacta 80935
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>ref|XM_474414.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 447

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 163 ctagaagaatgtcccttctggaggctg 189
           ||||||||| |||||||||||||||||
Sbjct: 447 ctagaagaaggtcccttctggaggctg 421
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>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence
          Length = 790

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 164 tagaagaatgtcccttctggaggctgcacta 194
           ||||||||||||||||| |||||||| ||||
Sbjct: 519 tagaagaatgtcccttccggaggctgaacta 489
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 163      ctagaagaatgtcccttctggaggctg 189
                ||||||||| |||||||||||||||||
Sbjct: 35012558 ctagaagaaggtcccttctggaggctg 35012532
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>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full
           insert sequence
          Length = 813

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 163 ctagaagaatgtcccttctggaggctg 189
           ||||||||| |||||||||||||||||
Sbjct: 460 ctagaagaaggtcccttctggaggctg 434
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>gb|AY103581.1| Zea mays PCO136340 mRNA sequence
          Length = 1242

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 164 tagaagaatgtcccttctggaggctgcacta 194
           ||||||||||||||||| |||||||| ||||
Sbjct: 605 tagaagaatgtcccttccggaggctgaacta 575
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 163   ctagaagaatgtcccttctggaggctg 189
             ||||||||| |||||||||||||||||
Sbjct: 44305 ctagaagaaggtcccttctggaggctg 44279
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 163   ctagaagaatgtcccttctggaggctg 189
             ||||||||| |||||||||||||||||
Sbjct: 71608 ctagaagaaggtcccttctggaggctg 71582
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 163     ctagaagaatgtcccttctggaggctgcac 192
               ||||||||| |||||||||||||| |||||
Sbjct: 7151297 ctagaagaacgtcccttctggaggttgcac 7151326
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1381_H04
          Length = 130961

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 163  ctagaagaatgtcccttctggaggctgcac 192
            ||||||||| |||||||||||||| |||||
Sbjct: 3402 ctagaagaacgtcccttctggaggttgcac 3431
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 163    ctagaagaatgtcccttctggaggctgcac 192
              ||||||||| |||||||||||||| |||||
Sbjct: 103376 ctagaagaacgtcccttctggaggttgcac 103405
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>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full
           insert sequence
          Length = 833

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 163 ctagaagaatgtcccttctggaggctgcac 192
           ||||||||| |||||||||||||| |||||
Sbjct: 505 ctagaagaacgtcccttctggaggttgcac 476
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>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full
           insert sequence
          Length = 853

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 163 ctagaagaatgtcccttctggaggctgcac 192
           ||||||||| |||||||||||||| |||||
Sbjct: 556 ctagaagaacgtcccttctggaggttgcac 527
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>gb|AC146508.3| Pan troglodytes BAC clone RP43-172A15 from 7, complete sequence
          Length = 208067

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   aatgtcccttctggaggctgc 190
             |||||||||||||||||||||
Sbjct: 72407 aatgtcccttctggaggctgc 72427
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>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence
          Length = 198935

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    aaagatctgcaggcagcagac 76
             |||||||||||||||||||||
Sbjct: 48275 aaagatctgcaggcagcagac 48295
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>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence
          Length = 244656

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aagatctgcaggcagcagac 76
              ||||||||||||||||||||
Sbjct: 220818 aagatctgcaggcagcagac 220799
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>gb|AY303814.1| Takifugu rubripes IFI56 (IFI56) gene, complete cds
          Length = 6404

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 114  agatcgctgctgttggaactggag 137
            ||||||||| ||||||||||||||
Sbjct: 6026 agatcgctgttgttggaactggag 6003
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>gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, complete sequence
          Length = 145303

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aagatctgcaggcagcagac 76
              ||||||||||||||||||||
Sbjct: 145053 aagatctgcaggcagcagac 145072
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>gb|AC005279.1|AC005279 Homo sapiens chromosome 17, clone hRPK.103_M_22, complete sequence
          Length = 151429

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aagatctgcaggcagcagac 76
             ||||||||||||||||||||
Sbjct: 36149 aagatctgcaggcagcagac 36130
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>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence
          Length = 167652

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     aaacctgggaaaagatctg 64
              |||||||||||||||||||
Sbjct: 108740 aaacctgggaaaagatctg 108758
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>ref|NM_201778.1| Arabidopsis thaliana ATP binding / shikimate kinase AT2G21940
           transcript variant AT2G21940.2 mRNA, complete cds
          Length = 1336

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 784 atcgctgctgttggaactg 802
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>ref|NM_127763.2| Arabidopsis thaliana ATP binding / shikimate kinase AT2G21940
           transcript variant AT2G21940.1 mRNA, complete cds
          Length = 1289

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 737 atcgctgctgttggaactg 755
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>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence
          Length = 244130

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     aaacctgggaaaagatctg 64
              |||||||||||||||||||
Sbjct: 200602 aaacctgggaaaagatctg 200620
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>gb|AC115869.9| Mus musculus chromosome 1, clone RP24-330M24, complete sequence
          Length = 158656

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   ggaactggagatgagatgg 146
             |||||||||||||||||||
Sbjct: 82549 ggaactggagatgagatgg 82531
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>emb|BX957337.7| Zebrafish DNA sequence from clone DKEY-211E8 in linkage group 6, complete
              sequence
          Length = 186218

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     acctgggaaaagatctgca 66
              |||||||||||||||||||
Sbjct: 106883 acctgggaaaagatctgca 106901
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>emb|BX546469.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 58857

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    agatctgcaggcagcagac 76
             |||||||||||||||||||
Sbjct: 50983 agatctgcaggcagcagac 51001
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>emb|AL353611.19| Human DNA sequence from clone RP11-447M12 on chromosome 9 Contains the
             FCN1 gene for ficolin (collagen/fibrinogen domain
             containing) 1 and a novel gene, complete sequence
          Length = 104972

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   agatgggccagcacacact 159
             |||||||||||||||||||
Sbjct: 41569 agatgggccagcacacact 41551
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>ref|NM_001039817.1| Danio rerio bone morphogenetic protein receptor type II a (bmpr2a),
            mRNA
          Length = 3902

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 48   acctgggaaaagatctgca 66
            |||||||||||||||||||
Sbjct: 1441 acctgggaaaagatctgca 1423
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>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
             sequence
          Length = 107848

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   atcgctgctgttggaactg 134
             |||||||||||||||||||
Sbjct: 83250 atcgctgctgttggaactg 83268
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>gb|AC025741.5| Homo sapiens BAC clone RP11-501E14 from 4, complete sequence
          Length = 190221

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    acataaacctgggaaaaga 60
             |||||||||||||||||||
Sbjct: 45536 acataaacctgggaaaaga 45554
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>gb|DQ002898.1| Danio rerio BMP type IIa receptor (bmpr2a) mRNA, complete cds
          Length = 3902

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 48   acctgggaaaagatctgca 66
            |||||||||||||||||||
Sbjct: 1441 acctgggaaaagatctgca 1423
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>gb|DQ257434.1| Uncultured organism HF70_19B12, complete sequence
          Length = 37010

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   gggaaaagatctgcaggca 70
            |||||||||||||||||||
Sbjct: 7143 gggaaaagatctgcaggca 7125
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>gb|AC016145.28|AC016145 Homo sapiens 12 BAC RP13-81N3 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 51921

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 40   tcacataaacctgggaaaa 58
            |||||||||||||||||||
Sbjct: 6950 tcacataaacctgggaaaa 6968
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>emb|BX819483.1|CNS0A8WO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB82ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1358

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 887 atcgctgctgttggaactg 905
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>emb|BX819460.1|CNS0A8WI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB7ZD10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1284

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 771 atcgctgctgttggaactg 789
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>emb|BX821284.1|CNS0A8C5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZH07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1384

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 813 atcgctgctgttggaactg 831
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>dbj|AK118899.2| Arabidopsis thaliana At2g21940 mRNA for putative shikimate kinase
           precursor, complete cds, clone: RAFL21-24-A05
          Length = 1300

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 atcgctgctgttggaactg 134
           |||||||||||||||||||
Sbjct: 746 atcgctgctgttggaactg 764
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>ref|XM_318507.2| Anopheles gambiae str. PEST ENSANGP00000021188 (ENSANGG00000018699),
            partial mRNA
          Length = 6039

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   cgggcggatcgcgaggaac 34
            |||||||||||||||||||
Sbjct: 5817 cgggcggatcgcgaggaac 5799
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>ref|XM_554240.1| Anopheles gambiae str. PEST ENSANGP00000026568 (ENSANGG00000018699),
            partial mRNA
          Length = 6114

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   cgggcggatcgcgaggaac 34
            |||||||||||||||||||
Sbjct: 5892 cgggcggatcgcgaggaac 5874
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>gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23, complete sequence
          Length = 193424

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     ggaaaagatctgcaggcag 71
              |||||||||||||||||||
Sbjct: 173925 ggaaaagatctgcaggcag 173943
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>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   gctgctgttggaactggag 137
             |||||||||||||||||||
Sbjct: 23599 gctgctgttggaactggag 23581
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>gb|AC004477.1|AC004477 Homo sapiens chromosome 17, clone HRPC890E16, complete sequence
          Length = 135505

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 172   tgtcccttctggaggctgc 190
             |||||||||||||||||||
Sbjct: 86063 tgtcccttctggaggctgc 86045
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>gb|AC005243.1|AC005243 Homo sapiens chromosome 17, clone hRPK.1124_B_17, complete sequence
          Length = 175609

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 133   tggagatgagatgggccag 151
             |||||||||||||||||||
Sbjct: 52606 tggagatgagatgggccag 52624
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>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
              complete sequence
          Length = 148521

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     agatctgcaggcagcagac 76
              |||||||||||||||||||
Sbjct: 140647 agatctgcaggcagcagac 140665
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>gb|AC147360.5| Mus musculus BAC clone RP24-241D11 from chromosome 12, complete
             sequence
          Length = 160968

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 127   tggaactggagatgagatg 145
             |||||||||||||||||||
Sbjct: 68471 tggaactggagatgagatg 68489
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>emb|AL627323.6| Mouse DNA sequence from clone RP23-477G24 on chromosome 11, complete
             sequence
          Length = 64341

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 165   agaagaatgtcccttctgg 183
             |||||||||||||||||||
Sbjct: 61086 agaagaatgtcccttctgg 61068


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,374,591
Number of Sequences: 3902068
Number of extensions: 1374591
Number of successful extensions: 97596
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97484
Number of HSP's gapped (non-prelim): 112
length of query: 194
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 172
effective length of database: 17,147,199,772
effective search space: 2949318360784
effective search space used: 2949318360784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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