ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags37b09 |
|---|---|
| Clone Library Name | barley_pub |
>U2508_HUMAN (Q96G75) Protein UNQ2508/PRO5996| Length = 393 Score = 125 bits (315), Expect = 9e-29 Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 2/149 (1%) Frame = -2 Query: 667 LDQSPYXEFVSSTHWKKLAEELIHQFCGLLGQSSDSPLSVAISAGFQGLPTLLKLSTVMA 488 L++SPY + S+HW ++ E C LLG S +SPLSV+ ++G LP L+ + V+ Sbjct: 247 LEKSPYCHLLDSSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIE 306 Query: 487 AKKQE--WQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIM 314 ++ W +LP+ I++G + YHSVF CP+LR+Q+SD NPP+ + CGH +S+ ++ Sbjct: 307 QRQCTGVWNHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALN 366 Query: 313 KLSKSSSRPFKCPYCPSEAVASQCKQLQF 227 KL KCPYCP E + K++ F Sbjct: 367 KLINGGK--LKCPYCPMEQNPADGKRIIF 393
>U2508_MOUSE (Q91YQ7) Protein UNQ2508/PRO5996 homolog| Length = 393 Score = 124 bits (312), Expect = 2e-28 Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 2/149 (1%) Frame = -2 Query: 667 LDQSPYXEFVSSTHWKKLAEELIHQFCGLLGQSSDSPLSVAISAGFQGLPTLLKLSTVMA 488 L++SPY + ++HW ++ E C LLG S +SPLSV+ ++G LP L+ + V+ Sbjct: 247 LEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIE 306 Query: 487 AKKQE--WQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIM 314 ++ W +LP+ I++G + YHSVF CP+LR+Q+SD NPP+ + CGH +S+ ++ Sbjct: 307 QRQCTGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALN 366 Query: 313 KLSKSSSRPFKCPYCPSEAVASQCKQLQF 227 KL KCPYCP E + K++ F Sbjct: 367 KLINGGK--LKCPYCPMEQNPADGKRIIF 393
>RMD5_YEAST (Q12508) Sporulation protein RMD5 (Glucose-induced degradation| protein 2) Length = 421 Score = 92.8 bits (229), Expect = 8e-19 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 2/136 (1%) Frame = -2 Query: 622 KKLAEELIHQFCGLLGQSSDSPLSVAISAGFQGLPTLLKLSTVMAAKKQEWQAMKQLPVP 443 K+ I ++C DSPL + + +G +K T+ +W +LP Sbjct: 286 KECTSLFIKEYCAAKHIFFDSPLFLIVLSGLISFQFFIKYKTIRELAHVDWTTKDELPFD 345 Query: 442 IDIGPEF--QYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 + + P+F +H +F+CPVL+E+++ +NPP + C H +SK+++ +LSK+ + FKCPYC Sbjct: 346 VKL-PDFLTHFHPIFICPVLKEETTTENPPYSLACHHIISKKALDRLSKNGTITFKCPYC 404 Query: 268 PSEAVASQCKQLQF*M 221 P S K+++F M Sbjct: 405 PVNTSMSSTKKVRFVM 420
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -2 Query: 409 VFVCPVLREQSSDDN-PPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 V CP+ E +++ P L+ CGH + +Q + KL SS +CP+C Sbjct: 18 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFC 65
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -2 Query: 409 VFVCPVLREQSSDDN-PPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 V CP+ E +++ P L+ CGH + +Q + KL SS +CP+C Sbjct: 17 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFC 64
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 36.2 bits (82), Expect = 0.092 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSEAVAS 248 CPV E + P+++ CGH+ K ++ LS+ +CP C E +S Sbjct: 16 CPVCLEVFKE---PLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDSS 63
>YT44_CAEEL (Q11072) Hypothetical RING finger protein B0416.4 in chromosome X| Length = 218 Score = 35.0 bits (79), Expect = 0.20 Identities = 15/52 (28%), Positives = 30/52 (57%) Frame = -2 Query: 427 EFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPY 272 EF++ S F+C + ++ + P+++ CGH + + I KL+ + KCP+ Sbjct: 148 EFEWRSCFICTMEYSRTDKNLHPIILNCGHNLCRSCINKLTGNGI--VKCPF 197
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSR-------PFKCPYCPSEAVASQC 242 CP+ D P ++PC H K+ + + + S R PFKCP C E A+ Sbjct: 10 CPICCSLFDD---PRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSATGI 66 Query: 241 KQLQ 230 LQ Sbjct: 67 NSLQ 70
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSR-------PFKCPYCPSEAVASQC 242 CP+ D P ++PC H K+ + L + + R PFKCP C E A+ Sbjct: 10 CPICCSLFDD---PRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETSATGV 66 Query: 241 KQLQ 230 LQ Sbjct: 67 NSLQ 70
>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein| (UbcH7-associated protein 1) Length = 2517 Score = 33.5 bits (75), Expect = 0.59 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 4/114 (3%) Frame = -2 Query: 592 FCGLLGQSSD-SPLSVAISAGFQGLP---TLLKLSTVMAAKKQEWQAMKQLPVPIDIGPE 425 FCG ++S SP +VA A Q LP T+ K+ Q + L + D+ Sbjct: 1968 FCGSQSETSKPSPEAVATLASLQ-LPAGRTMSPQEVEGLMKQTVRQVQETLNLEPDVAQH 2026 Query: 424 FQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPS 263 HS + L + S+D P+L+ G V + + + RP CP C S Sbjct: 2027 LLAHSHWGAEQLLQSYSEDPEPLLLAAGLCVHQAQAVPV-----RPDHCPVCVS 2075
>ZN638_MOUSE (Q61464) Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger| matrin-like protein) Length = 1960 Score = 32.3 bits (72), Expect = 1.3 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Frame = -2 Query: 526 GLPTLLKLSTVMAAKKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMP 347 G ++L +S V ++K + P + + HS F PVLREQ D Sbjct: 1376 GKSSVLTVSNVYSSKSSIKATVVSSPKAKSTPSKTESHSTFPKPVLREQIKADKKVSAKE 1435 Query: 346 CGHAVSKQSIMKLSKSSSRPFKCPY---CPSEAVASQCK 239 G + +S + S S S+P + C A QCK Sbjct: 1436 FGLLKNTRSGLAESNSKSKPTQIGVNRGCSGRISALQCK 1474
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 32.3 bits (72), Expect = 1.3 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 CP+ E + P+++ CGH+ K + LS+ +CP C Sbjct: 16 CPICLEVFKE---PLMLQCGHSYCKNCLDSLSEHLDSELRCPVC 56
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 31.6 bits (70), Expect = 2.3 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 CP+ E + P+++ CGH+ K ++ LS +CP C Sbjct: 16 CPICLEVFKE---PLMLQCGHSYCKGCLVSLSCHLDAELRCPVC 56
>MYCLB_XENLA (P35805) L-myc B protein (L-myc 2 protein)| Length = 344 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = -2 Query: 559 PLSVAISAGFQGLPTLLKLSTVMAAKKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQ 380 P+++ + A PT KL + ++Q A + P P + P+ +HS V E Sbjct: 178 PVTITVRAD----PTATKLFHISIHQQQHNYAARLPPEPNTMSPQHNFHST----VKEEP 229 Query: 379 SSDDNPPMLMPC 344 +PP L PC Sbjct: 230 GEVTSPPELQPC 241
>MATK_AMBTC (Q70Y16) Maturase K (Intron maturase)| Length = 501 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 15/76 (19%) Frame = +3 Query: 240 LHCDATASEGQY--GHLKGL---------ELLFDSFMIDC----FDTACPQGISIGGLSS 374 +H + ++ Y G+L GL E+L +SFMID FDT P IG L+ Sbjct: 320 IHINELSNHSFYFPGYLSGLRLNPSMVRSEMLENSFMIDAVIKRFDTVVPTIFLIGSLAK 379 Query: 375 LDCSRSTGHTKTEWYW 422 + +GH ++ W Sbjct: 380 VKLCNVSGHPISKSVW 395
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/59 (23%), Positives = 25/59 (42%) Frame = -2 Query: 436 IGPEFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSE 260 + P + + CP+ ++ P L+PC H + + + R KCP C +E Sbjct: 31 VNPLEKIEQLLTCPICLDRYKQ---PKLLPCQHTFCYPCLESCADTLHRNLKCPECRAE 86
>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD protein)| Length = 3119 Score = 30.8 bits (68), Expect = 3.8 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 445 PIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPC 344 P+D+GPEF + +C V+ S + P ++ C Sbjct: 2821 PLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHC 2854
>HD_RAT (P51111) Huntingtin (Huntington disease protein homolog) (HD protein)| Length = 3110 Score = 30.8 bits (68), Expect = 3.8 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 445 PIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPC 344 P+D+GPEF + +C V+ S + P ++ C Sbjct: 2812 PLDVGPEFSASVIQMCGVMLSGSEESTPSVIYHC 2845
>HD_HUMAN (P42858) Huntingtin (Huntington disease protein) (HD protein)| Length = 3144 Score = 30.8 bits (68), Expect = 3.8 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 445 PIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPC 344 P+D+GPEF + +C V+ S + P ++ C Sbjct: 2846 PLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHC 2879
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 CP+ E + P+++ CGH+ K + LS+ CP C Sbjct: 16 CPICLEVFKE---PLMLQCGHSYCKDCLDNLSQHLDSELCCPVC 56
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 30.4 bits (67), Expect = 5.0 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = -2 Query: 409 VFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSE 260 + CP+ E + P+ C H K ++KL P +CP C +E Sbjct: 21 ILECPICLELIKE---PVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNE 67
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 30.4 bits (67), Expect = 5.0 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = -2 Query: 409 VFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSE 260 + CP+ E + P+ C H K ++KL P +CP C +E Sbjct: 21 ILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNE 67
>RNF13_MOUSE (O54965) RING finger protein 13| Length = 381 Score = 30.4 bits (67), Expect = 5.0 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = -2 Query: 463 MKQLPV-PIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMK-LSKSSSR 290 +K+LPV G E+ VC + E+ D + ++PC HA + + L+K+ Sbjct: 223 LKKLPVHKFKKGDEYD-----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK- 276 Query: 289 PFKCPYCPSEAVASQ 245 CP C + V SQ Sbjct: 277 --TCPVCKQKVVPSQ 289
>RPOA_LDVC (Q06502) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1 Length = 3637 Score = 30.4 bits (67), Expect = 5.0 Identities = 10/38 (26%), Positives = 22/38 (57%) Frame = -2 Query: 355 LMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSEAVASQC 242 ++ CG ++ S+ ++ K + PFK P+ P+ + +C Sbjct: 1207 VLQCGGSIQDVSVPEVKKVTKVPFKAPFFPNVTIDPEC 1244
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.4 bits (67), Expect = 5.0 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = +3 Query: 255 TASEGQYGHLKGLELLFDSFMIDCFDTACPQGISIG-GLSSLDCSRSTGHTKTEWYWNSG 431 T + G ++GL F+ D F TA + G G ++ ++ST H K +W Sbjct: 515 TLDQASQGQVQGLCGNFNGLEGDDFKTASGLVEATGAGFANTWKAQSTCHDKLDWL--DD 572 Query: 432 PMSMGTGSCFMACHSCFLAAITVLSFNKVGSP*KPAD 542 P S+ S A H C L T F + S PA+ Sbjct: 573 PCSLNIESANYAEHWCSLLKKTETPFGRCHSAVDPAE 609
>MYCLA_XENLA (Q05404) L-myc A protein (L-myc 1 protein)| Length = 344 Score = 30.4 bits (67), Expect = 5.0 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = -2 Query: 559 PLSVAISAGFQGLPTLLKLSTVMAAKKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQ 380 P+++ + A PT KL + ++Q A + P P + P+ +HS P+ E Sbjct: 178 PVTITVRAD----PTATKLFHISIHQQQHNYAARLPPEPNSMSPQPNFHS----PIKEEP 229 Query: 379 SSDDNPPMLMPC 344 +PP L C Sbjct: 230 GEVTSPPALQQC 241
>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor| Length = 515 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 349 PCGHAVSKQSIMKLSKSSSRPFKCPYCPSEAVASQCK 239 PC + I + SSS +KC +CP E V SQCK Sbjct: 249 PCANG----GICSIDSSSSTGYKC-HCPFEFVGSQCK 280
>PARC_MOUSE (Q80TT8) p53-associated parkin-like cytoplasmic protein| Length = 1865 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -2 Query: 469 QAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSR 290 Q + L + D+ HS + L + SDD P+L+ G V + ++ +R Sbjct: 1351 QVQETLNLEPDVAQHLLAHSHWGTEQLLQSYSDDPEPLLLAAGLRVPQAQVV-----PTR 1405 Query: 289 PFKCPYC 269 P +CP C Sbjct: 1406 PDQCPVC 1412
>JAM3_HUMAN (Q9BX67) Junctional adhesion molecule C precursor (JAM-C)| (Junctional adhesion molecule 3) (JAM-3) (JAM-2) Length = 310 Score = 29.6 bits (65), Expect = 8.6 Identities = 10/38 (26%), Positives = 20/38 (52%) Frame = +3 Query: 342 PQGISIGGLSSLDCSRSTGHTKTEWYWNSGPMSMGTGS 455 P+ + +G +++L C S GH + + W + + T S Sbjct: 147 PKAVPVGKMATLHCQESEGHPRPHYSWYRNDVPLPTDS 184
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -2 Query: 400 CPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 CP+ E + D P+L PC H + ++ ++ +S S CP C Sbjct: 1040 CPICLESADD---PVLTPCAHRMCRECLLTSWRSPSCGL-CPIC 1079
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 29.6 bits (65), Expect = 8.6 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -2 Query: 403 VCPVLREQSSDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYC 269 +CP+ + P+ + CGH + I ++ ++S FKCP C Sbjct: 15 ICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 56
>PRDM6_HUMAN (Q9NQX0) PR domain zinc finger protein 6 (PR domain-containing| protein 6) (Fragment) Length = 608 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Frame = -2 Query: 367 NPPMLMPCGH---AVSKQSIMK---LSKSSSRPFKCPYC 269 NP CGH + S+ S ++ ++ SS RPFKC YC Sbjct: 509 NPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYC 547
>MOAA_AGRT5 (Q8UER0) Molybdenum cofactor biosynthesis protein A| Length = 349 Score = 29.6 bits (65), Expect = 8.6 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -2 Query: 376 SDDNPPMLMPCGHAVSKQSIMKLSKSSSRPFKCPYCPSE 260 +++N PM+ P G A++ +++S + F+C YC SE Sbjct: 15 TENNAPMVDPFGRAIT---YLRVSVTDRCDFRCTYCMSE 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,471,222 Number of Sequences: 219361 Number of extensions: 1910144 Number of successful extensions: 5879 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5577 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5866 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
