ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1p01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
2dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
4gb|AY111250.1| Zea mays CL14815_1 mRNA sequence 141 3e-30
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
7emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
9dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
10dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
11gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, compl... 42 1.8
12dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
13gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, co... 40 7.0
14gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
15gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 7.0
16gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
17gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, comp... 40 7.0
18emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chr... 40 7.0
19emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chr... 40 7.0
20ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predi... 40 7.0
21gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 7.0
22gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence 40 7.0
23gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence 40 7.0
24gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 7.0
25gb|BC109580.1| Bos taurus cDNA clone MGC:133945 IMAGE:8056717, c... 40 7.0
26gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosom... 40 7.0
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
28gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence 40 7.0
29gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I... 40 7.0
30dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
31gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I... 40 7.0
32gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 7.0
33emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 7.0
34dbj|AB231866.1| Branchiostoma floridae gene for zinc finger prot... 40 7.0 
>dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D03, full
           insert sequence
          Length = 1299

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                       
Query: 283 gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
           |||| |||||||||||||||||| ||||||||||||||||||||||  ||||  ||||||
Sbjct: 381 gatgcctgtccagaagaaagcctctccgacctcgccttgttagctctttccatgtaatct 322

                                                                       
Query: 343 tgatgagagtcatgctttgcccctcgggtcatgaggtaccagggaaccccgaaaatggcg 402
           || || || | ||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 321 tggtgcgactgatgctttgcccctcgggtcatgaggtaccaggggacgccgaagatggcg 262

                                                              
Query: 403 gcgaagatggcgatgcctgcgacgacgtgcttcttctctccgctgtacagg 453
           ||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 261 gcgaagatggcgatgccggcgacgacgtgcttcttctcgccgctgtacagg 211
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>dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F07, full
           insert sequence
          Length = 640

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                       
Query: 283 gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
           |||| |||||||||||||||||| ||||||||||||||||||||||  ||||  ||||||
Sbjct: 346 gatgcctgtccagaagaaagcctctccgacctcgccttgttagctctttccatgtaatct 287

                                                                       
Query: 343 tgatgagagtcatgctttgcccctcgggtcatgaggtaccagggaaccccgaaaatggcg 402
           || || || | ||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 286 tggtgcgactgatgctttgcccctcgggtcatgaggtaccaggggacgccgaagatggcg 227

                                                              
Query: 403 gcgaagatggcgatgcctgcgacgacgtgcttcttctctccgctgtacagg 453
           ||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 226 gcgaagatggcgatgccggcgacgacgtgcttcttctcgccgctgtacagg 176
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>dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G12, full
           insert sequence
          Length = 521

 Score =  198 bits (100), Expect = 1e-47
 Identities = 154/172 (89%)
 Strand = Plus / Minus

                                                                       
Query: 282 tgatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatc 341
           ||||| ||||||||||||||| || |||||||||||||||||||||   ||||  |||||
Sbjct: 228 tgatgactgtccagaagaaagtctctccgacctcgccttgttagctttttccatgtaatc 169

                                                                       
Query: 342 ttgatgagagtcatgctttgcccctcgggtcatgaggtaccagggaaccccgaaaatggc 401
           ||| ||||| | |||||||| ||||||| |||||| |||||||||||| ||||| |||||
Sbjct: 168 ttggtgagattgatgctttgtccctcggctcatgaagtaccagggaacgccgaagatggc 109

                                                               
Query: 402 ggcgaagatggcgatgcctgcgacgacgtgcttcttctctccgctgtacagg 453
           |||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 108 ggcgaagatggcgatgccggcgacgacgtgcttcttctcgccgctgtacagg 57
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>gb|AY111250.1| Zea mays CL14815_1 mRNA sequence
          Length = 431

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 283 gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
           |||| |||||||||||||||||| || || ||||||||||||||    ||||  ||||||
Sbjct: 159 gatgactgtccagaagaaagcctctctgatctcgccttgttagccttttccatgtaatct 218

                                                                       
Query: 343 tgatgagagtcatgctttgcccctcgggtcatgaggtaccagggaaccccgaaaatggcg 402
           || ||||| | ||||||||||||||| ||||||| |||||| || || ||||| | ||| 
Sbjct: 219 tggtgagattgatgctttgcccctcgcgtcatgaagtaccatgggacgccgaagacggca 278

                                                          
Query: 403 gcgaagatggcgatgcctgcgacgacgtgcttcttctctccgctgta 449
           ||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 279 gcgaagatggcgatgccggcgacgacgtgcttcttctcgccactgta 325
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                            
Query: 364      cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
                ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||
Sbjct: 22675296 cctcgggtcatgaggtaccaggggacgccgaagatggcggcgaagatggcgatgccggcg 22675237

                                              
Query: 424      acgacgtgcttcttctctccgctgtacagg 453
                ||||||||||||||||| ||||||||||||
Sbjct: 22675236 acgacgtgcttcttctcgccgctgtacagg 22675207



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 283      gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
                |||| |||||||||||||||||| ||||||||||||||||||||||  ||||  ||||||
Sbjct: 22676431 gatgcctgtccagaagaaagcctctccgacctcgccttgttagctctttccatgtaatct 22676372

                                        
Query: 343      tgatgagagtcatgctttgcccct 366
                || || || | |||||||||||||
Sbjct: 22676371 tggtgcgactgatgctttgcccct 22676348
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                            
Query: 364      cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
                ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||
Sbjct: 22603487 cctcgggtcatgaggtaccaggggacgccgaagatggcggcgaagatggcgatgccggcg 22603428

                                              
Query: 424      acgacgtgcttcttctctccgctgtacagg 453
                ||||||||||||||||| ||||||||||||
Sbjct: 22603427 acgacgtgcttcttctcgccgctgtacagg 22603398



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 283      gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
                |||| |||||||||||||||||| ||||||||||||||||||||||  ||||  ||||||
Sbjct: 22604622 gatgcctgtccagaagaaagcctctccgacctcgccttgttagctctttccatgtaatct 22604563

                                        
Query: 343      tgatgagagtcatgctttgcccct 366
                || || || | |||||||||||||
Sbjct: 22604562 tggtgcgactgatgctttgcccct 22604539
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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138368

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
              ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||
Sbjct: 120416 cctcgggtcatgaggtaccaggggacgccgaagatggcggcgaagatggcgatgccggcg 120357

                                            
Query: 424    acgacgtgcttcttctctccgctgtacagg 453
              ||||||||||||||||| ||||||||||||
Sbjct: 120356 acgacgtgcttcttctcgccgctgtacagg 120327



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                          
Query: 283    gatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatct 342
              |||| |||||||||||||||||| ||||||||||||||||||||||  ||||  ||||||
Sbjct: 121551 gatgcctgtccagaagaaagcctctccgacctcgccttgttagctctttccatgtaatct 121492

                                      
Query: 343    tgatgagagtcatgctttgcccct 366
              || || || | |||||||||||||
Sbjct: 121491 tggtgcgactgatgctttgcccct 121468
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                            
Query: 364      cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
                |||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 10440328 cctcggctcatgaagtaccagggaacgccgaagatggcggcgaagatggcgatgccggcg 10440387

                                              
Query: 424      acgacgtgcttcttctctccgctgtacagg 453
                ||||||||||||||||| ||||||||||||
Sbjct: 10440388 acgacgtgcttcttctcgccgctgtacagg 10440417



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                            
Query: 282      tgatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatc 341
                ||||| ||||||||||||||| || |||||||||||||||||||||   ||||  |||||
Sbjct: 10438299 tgatgactgtccagaagaaagtctctccgacctcgccttgttagctttttccatgtaatc 10438358

                                         
Query: 342      ttgatgagagtcatgctttgcccct 366
                ||| ||||| | |||||||| ||||
Sbjct: 10438359 ttggtgagattgatgctttgtccct 10438383
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>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091D16
          Length = 174222

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                          
Query: 364    cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
              |||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 141286 cctcggctcatgaagtaccagggaacgccgaagatggcggcgaagatggcgatgccggcg 141345

                                            
Query: 424    acgacgtgcttcttctctccgctgtacagg 453
              ||||||||||||||||| ||||||||||||
Sbjct: 141346 acgacgtgcttcttctcgccgctgtacagg 141375



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                          
Query: 282    tgatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatc 341
              ||||| ||||||||||||||| || |||||||||||||||||||||   ||||  |||||
Sbjct: 139257 tgatgactgtccagaagaaagtctctccgacctcgccttgttagctttttccatgtaatc 139316

                                       
Query: 342    ttgatgagagtcatgctttgcccct 366
              ||| ||||| | |||||||| ||||
Sbjct: 139317 ttggtgagattgatgctttgtccct 139341
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>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0053M06
          Length = 175416

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                         
Query: 364   cctcgggtcatgaggtaccagggaaccccgaaaatggcggcgaagatggcgatgcctgcg 423
             |||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 62919 cctcggctcatgaagtaccagggaacgccgaagatggcggcgaagatggcgatgccggcg 62978

                                           
Query: 424   acgacgtgcttcttctctccgctgtacagg 453
             ||||||||||||||||| ||||||||||||
Sbjct: 62979 acgacgtgcttcttctcgccgctgtacagg 63008



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 282   tgatggctgtccagaagaaagcctatccgacctcgccttgttagctcgctccacataatc 341
             ||||| ||||||||||||||| || |||||||||||||||||||||   ||||  |||||
Sbjct: 60890 tgatgactgtccagaagaaagtctctccgacctcgccttgttagctttttccatgtaatc 60949

                                      
Query: 342   ttgatgagagtcatgctttgcccct 366
             ||| ||||| | |||||||| ||||
Sbjct: 60950 ttggtgagattgatgctttgtccct 60974
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>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence
          Length = 216172

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    tggctgtccagaagaaagcct 305
              |||||||||||||||||||||
Sbjct: 155910 tggctgtccagaagaaagcct 155930
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>dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675M1, complete
              sequence
          Length = 177882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 191    caagattaagccttcagattc 211
              |||||||||||||||||||||
Sbjct: 139066 caagattaagccttcagattc 139046
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>gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, complete sequence
          Length = 164158

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   tctactgttactgtattacaataa 131
             |||||||||| |||||||||||||
Sbjct: 92781 tctactgttagtgtattacaataa 92804
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>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01,
             complete sequence
          Length = 119525

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aaatatcatgatttgttgtc 49
             ||||||||||||||||||||
Sbjct: 19777 aaatatcatgatttgttgtc 19796
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   tctactgttactgtattaca 127
             ||||||||||||||||||||
Sbjct: 32087 tctactgttactgtattaca 32068
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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aaatatcatgatttgttgtc 49
             ||||||||||||||||||||
Sbjct: 90505 aaatatcatgatttgttgtc 90524
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>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gaacaaaatttctactgtta 117
             ||||||||||||||||||||
Sbjct: 44555 gaacaaaatttctactgtta 44574
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>emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chromosome 1 Contains a CpG
             island, complete sequence
          Length = 111901

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ttgtccatcgtctcctccta 64
             ||||||||||||||||||||
Sbjct: 29609 ttgtccatcgtctcctccta 29628
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>emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chromosome 10 Contains
            part of the TCF7L2 gene for transcription factor 7-like 2
            (T-cell specific, HMG-box) and a ribosomal protein S15
            (RPS15) pseudogene, complete sequence
          Length = 101839

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   caaaaaagactactatgaga 90
            ||||||||||||||||||||
Sbjct: 5018 caaaaaagactactatgaga 4999
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>ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predicted mRNA
          Length = 4068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gaagatggcgatgcctgcgacgac 428
           |||||||| |||||||||||||||
Sbjct: 759 gaagatggtgatgcctgcgacgac 736
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    gatgcctgcgacgacgtgct 433
              ||||||||||||||||||||
Sbjct: 160304 gatgcctgcgacgacgtgct 160285
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>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence
          Length = 191756

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    caggacgtgatctatcctgg 469
              ||||||||||||||||||||
Sbjct: 179457 caggacgtgatctatcctgg 179476
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>gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence
          Length = 165590

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   caggacgtgatctatcctgg 469
             ||||||||||||||||||||
Sbjct: 22564 caggacgtgatctatcctgg 22583
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>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   ctccttcattctttcagtga 284
             ||||||||||||||||||||
Sbjct: 29094 ctccttcattctttcagtga 29113
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>gb|BC109580.1| Bos taurus cDNA clone MGC:133945 IMAGE:8056717, complete cds
          Length = 1777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 cagctccttcattctttcag 281
           ||||||||||||||||||||
Sbjct: 613 cagctccttcattctttcag 594
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>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence
          Length = 206310

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gaacaaaatttctactgtta 117
              ||||||||||||||||||||
Sbjct: 174196 gaacaaaatttctactgtta 174215
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 30       aaatatcatgatttgttgtc 49
                ||||||||||||||||||||
Sbjct: 21971291 aaatatcatgatttgttgtc 21971310
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>gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence
          Length = 164404

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctactgttactgtattacaa 128
             ||||||||||||||||||||
Sbjct: 50247 ctactgttactgtattacaa 50228
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>gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  tcctcctagaatagcaaaaa 76
           ||||||||||||||||||||
Sbjct: 787 tcctcctagaatagcaaaaa 768
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>dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G11, full
           insert sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 391 ccgaaaatggcggcgaagatggcg 414
           |||| |||||||||||||||||||
Sbjct: 123 ccgataatggcggcgaagatggcg 100
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>gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I (COI) gene, partial
            cds; mitochondrial
          Length = 1450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tcctcctagaatagcaaaaa 76
            ||||||||||||||||||||
Sbjct: 1104 tcctcctagaatagcaaaaa 1085
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    agcaaaaaagactactatga 88
             ||||||||||||||||||||
Sbjct: 44379 agcaaaaaagactactatga 44360
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 405     gaagatggcgatgcctgcgacgac 428
               |||||||| |||||||||||||||
Sbjct: 3019941 gaagatggtgatgcctgcgacgac 3019964
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>dbj|AB231866.1| Branchiostoma floridae gene for zinc finger protein AmphiZic, complete
             cds
          Length = 155361

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aacaaaaatatcatgatttg 44
             ||||||||||||||||||||
Sbjct: 15636 aacaaaaatatcatgatttg 15617


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,331,711
Number of Sequences: 3902068
Number of extensions: 4331711
Number of successful extensions: 78203
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77990
Number of HSP's gapped (non-prelim): 212
length of query: 520
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 497
effective length of database: 17,143,297,704
effective search space: 8520218958888
effective search space used: 8520218958888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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