ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105326.1| Zea mays PCO106335 mRNA sequence 276 9e-71
2gb|AF457963.1| Zea mays clone cta1n.pk0025.h5, mRNA sequence 254 3e-64
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 5e-20
4gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 107 5e-20
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
6ref|NM_130319.2| Arabidopsis thaliana FUM1 (FUMARASE 1); catalyt... 92 3e-15
7gb|AY062460.1| Arabidopsis thaliana putative fumarase (At2g47510... 92 3e-15
8gb|AY054252.1| Arabidopsis thaliana At2g47510/T30B22.19 mRNA, co... 92 3e-15
9emb|BX819986.1|CNS0A806 Arabidopsis thaliana Full-length cDNA Co... 92 3e-15
10gb|BT003361.1| Arabidopsis thaliana putative fumarase (At2g47510... 92 3e-15
11ref|NM_180835.1| Arabidopsis thaliana catalytic/ fumarate hydrat... 82 3e-12
12ref|NM_124474.2| Arabidopsis thaliana catalytic/ fumarate hydrat... 82 3e-12
13gb|AY113070.1| Arabidopsis thaliana AT5g50950/K3K7_11 mRNA, comp... 82 3e-12
14gb|AY052197.1| Arabidopsis thaliana AT5g50950/K3K7_11 mRNA, comp... 82 3e-12
15gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 ma... 76 2e-10
16gb|AF020303.1|AF020303 Arabidopsis thaliana fumarase (FUM1) gene... 76 2e-10
17gb|U82202.1|ATU82202 Arabidopsis thaliana fumarase (FUM1) mRNA, ... 76 2e-10
18dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 68 4e-08
19emb|X91615.1|STFUM1 S.tuberosum mRNA for fumarase 66 2e-07
20gb|AC152115.2| Pichia stipitis clone JGIAHYZ-21P12, complete seq... 48 0.038
21gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, comple... 46 0.15
22gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, co... 44 0.60
23gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete se... 44 0.60
24emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 44 0.60
25gb|AC106720.8| Homo sapiens 3 BAC RP11-26M20 (Roswell Park Cance... 44 0.60
26gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, comp... 42 2.4
27gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosom... 42 2.4
28emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 42 2.4
29emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in ... 42 2.4
30gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell ... 42 2.4
31gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 42 2.4
32emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, c... 42 2.4
33emb|CT030148.2| Kuenenia stuttgartiensis genome fragment KUST_A ... 42 2.4
34gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 ... 42 2.4
35gb|AE000512.1| Thermotoga maritima MSB8, complete genome 42 2.4
36gb|AC153990.2| Mus musculus 6 BAC RP24-293L1 (Roswell Park Cance... 42 2.4
37dbj|AP003778.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.4
38gb|AY956541.1| Twisted-stalk chlorotic streak virus isolate Skwe... 40 9.3
39gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosom... 40 9.3
40gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, co... 40 9.3
41ref|XM_734018.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.3
42gb|AC079440.38| Mus musculus strain 129/Sv clone ct7-340l7 map 2... 40 9.3
43emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on ch... 40 9.3
44emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 9.3
45emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chr... 40 9.3
46emb|AL445985.10| Human DNA sequence from clone RP11-45B20 on chr... 40 9.3
47gb|AC148449.2| Xenopus tropicalis clone CH216-118D6, complete se... 40 9.3
48gb|AC079097.6| Homo sapiens chromosome 8, clone RP11-98P2, compl... 40 9.3
49gb|AC108693.5| Homo sapiens 3 BAC RP11-271C24 (Roswell Park Canc... 40 9.3
50gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct... 40 9.3
51emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in... 40 9.3
52emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, c... 40 9.3
53gb|AC016761.10| Homo sapiens BAC clone RP11-538A12 from 2, compl... 40 9.3
54gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complet... 40 9.3
55emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chro... 40 9.3
56emb|BX813325.2| Mouse DNA sequence from clone RP23-319D11 on chr... 40 9.3
57emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in... 40 9.3
58gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosom... 40 9.3
59gb|AC154390.1| Mus musculus BAC clone RP23-10G24 from 13, comple... 40 9.3
60emb|BX649397.8| Zebrafish DNA sequence from clone CH211-14J20 in... 40 9.3
61emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chrom... 40 9.3
62emb|Z82252.6|HSN91G8 Human DNA sequence from clone LL22NC03-91G8... 40 9.3 
>gb|AY105326.1| Zea mays PCO106335 mRNA sequence
          Length = 1299

 Score =  276 bits (139), Expect = 9e-71
 Identities = 270/311 (86%), Gaps = 2/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 373 aatcagaagggccaatcattttctctggaacaacgagttcatggaattccttttccgtca 432
           |||||||||| |||||||||||||| || || || || ||||||||||| |  ||||| |
Sbjct: 813 aatcagaaggaccaatcattttctccgggacgacaagctcatggaattcttgctccgtta 754

                                                                       
Query: 433 aaactctgaggcttaaagcagcttccttcagtgttgttccttctttgtgagctttcttag 492
           | ||||  |||  ||| |||||||||||||  || |||||||||||||| ||||||||||
Sbjct: 753 atactccaaggtctaatgcagcttccttcaacgtggttccttctttgtgggctttcttag 694

                                                                       
Query: 493 caacagctgcagcattgtcatagccaattttggggttcaacgatgttaccaacatcaaag 552
           ||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| ||
Sbjct: 693 caacagctgcagcattgtcatagccaattttagggttcaaagatgtcactaacatcagag 634

                                                                       
Query: 553 actcgtgcaacaaattgtgaaattctcttatggtttgcttctatttcccctgacacagtt 612
           |||| ||||| || ||||||||||||||| ||||||||||  | ||||||||||||| ||
Sbjct: 633 actcatgcaa-aagttgtgaaattctcttgtggtttgctt-gaattcccctgacacaatt 576

                                                                       
Query: 613 tttctcaaaggatacagatgcatcccctaataatctcaatgatcgaagcaatccagcagc 672
           |||||||||||| || |||||||||||||| || |||||||||||||| ||||| || ||
Sbjct: 575 tttctcaaaggacacggatgcatcccctaacaacctcaatgatcgaagtaatccggctgc 516

                      
Query: 673 aatcattggct 683
            ||||||||||
Sbjct: 515 gatcattggct 505
to top
>gb|AF457963.1| Zea mays clone cta1n.pk0025.h5, mRNA sequence
          Length = 517

 Score =  254 bits (128), Expect = 3e-64
 Identities = 264/308 (85%), Gaps = 2/308 (0%)
 Strand = Plus / Minus

                                                                       
Query: 373 aatcagaagggccaatcattttctctggaacaacgagttcatggaattccttttccgtca 432
           |||||||||| ||||||||||| || || || || || ||||||||||| |  ||||| |
Sbjct: 306 aatcagaaggaccaatcattttntccgggacgacaagctcatggaattcttgctccgtta 247

                                                                       
Query: 433 aaactctgaggcttaaagcagcttccttcagtgttgttccttctttgtgagctttcttag 492
           | ||||  |||  ||| |||||||| ||||  || |||||||||||||| ||||||||||
Sbjct: 246 atactccaaggtntaatgcagcttcnttcaacgtggttccttctttgtgggctttcttag 187

                                                                       
Query: 493 caacagctgcagcattgtcatagccaattttggggttcaacgatgttaccaacatcaaag 552
           ||||||||||||||||||||||||||||||| |||||||| ||| | || ||||||| ||
Sbjct: 186 caacagctgcagcattgtcatagccaattttagggttcaaagatntcactaacatcagag 127

                                                                       
Query: 553 actcgtgcaacaaattgtgaaattctcttatggtttgcttctatttcccctgacacagtt 612
           |||| ||||| || ||||||||||||||| ||||||||||  | ||||||||||||| ||
Sbjct: 126 actcatgcaa-aagttgtgaaattctcttgtggtttgctt-gaattcccctgacacaatt 69

                                                                       
Query: 613 tttctcaaaggatacagatgcatcccctaataatctcaatgatcgaagcaatccagcagc 672
           |||||||||||| || |||||||||||||| || |||||||||||||| ||||| || ||
Sbjct: 68  tttctcaaaggacacggatgcatcccctaacaacctcaatgatcgaagtaatccggctgc 9

                   
Query: 673 aatcattg 680
            |||||||
Sbjct: 8   gatcattg 1
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 5e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 565      aattgtgaaattctcttatggtttgcttctatttcccctgacacagtttttctcaaagga 624
                ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 12521526 aattgtgaaattctcttatggtttgcttgaatt-cccctgacacagtttttctcaaagga 12521584

                                          
Query: 625      tacagatgcatcccctaataatctca 650
                 ||||| ||||||||||  |||||||
Sbjct: 12521585 cacagaggcatcccctagcaatctca 12521610



 Score =  101 bits (51), Expect = 3e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                       
Query: 469      ttccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12521243 ttccttctttgtgtgctttcttagcaacagctgcagcattgtcatagccaatttt 12521297



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                            
Query: 373      aatcagaagggccaatcattttctctggaacaacgagttcatggaattccttttccgtca 432
                |||||||||| ||||||||||||||||||||||| || |||||||||||   ||| ||||
Sbjct: 12520803 aatcagaaggaccaatcattttctctggaacaacaagctcatggaattctgattctgtca 12520862

                                           
Query: 433      aaactctgaggcttaaagcagcttcct 459
                | |||| ||||  || |||||||||||
Sbjct: 12520863 atactccgaggtctagagcagcttcct 12520889



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 525      gggttcaacgatgttaccaacatcaaagact 555
                |||||||| ||||| ||||||||||||||||
Sbjct: 12521394 gggttcaaagatgtcaccaacatcaaagact 12521424
to top
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score =  107 bits (54), Expect = 5e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                         
Query: 565   aattgtgaaattctcttatggtttgcttctatttcccctgacacagtttttctcaaagga 624
             ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 66415 aattgtgaaattctcttatggtttgcttgaatt-cccctgacacagtttttctcaaagga 66357

                                       
Query: 625   tacagatgcatcccctaataatctca 650
              ||||| ||||||||||  |||||||
Sbjct: 66356 cacagaggcatcccctagcaatctca 66331



 Score =  101 bits (51), Expect = 3e-18
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                    
Query: 469   ttccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
             ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 66698 ttccttctttgtgtgctttcttagcaacagctgcagcattgtcatagccaatttt 66644



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 373   aatcagaagggccaatcattttctctggaacaacgagttcatggaattccttttccgtca 432
             |||||||||| ||||||||||||||||||||||| || |||||||||||   ||| ||||
Sbjct: 67138 aatcagaaggaccaatcattttctctggaacaacaagctcatggaattctgattctgtca 67079

                                        
Query: 433   aaactctgaggcttaaagcagcttcct 459
             | |||| ||||  || |||||||||||
Sbjct: 67078 atactccgaggtctagagcagcttcct 67052



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 525   gggttcaacgatgttaccaacatcaaagact 555
             |||||||| ||||| ||||||||||||||||
Sbjct: 66547 gggttcaaagatgtcaccaacatcaaagact 66517
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 5e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 565      aattgtgaaattctcttatggtttgcttctatttcccctgacacagtttttctcaaagga 624
                ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 12518289 aattgtgaaattctcttatggtttgcttgaatt-cccctgacacagtttttctcaaagga 12518347

                                          
Query: 625      tacagatgcatcccctaataatctca 650
                 ||||| ||||||||||  |||||||
Sbjct: 12518348 cacagaggcatcccctagcaatctca 12518373



 Score =  101 bits (51), Expect = 3e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                       
Query: 469      ttccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12518006 ttccttctttgtgtgctttcttagcaacagctgcagcattgtcatagccaatttt 12518060



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                            
Query: 373      aatcagaagggccaatcattttctctggaacaacgagttcatggaattccttttccgtca 432
                |||||||||| ||||||||||||||||||||||| || |||||||||||   ||| ||||
Sbjct: 12517566 aatcagaaggaccaatcattttctctggaacaacaagctcatggaattctgattctgtca 12517625

                                           
Query: 433      aaactctgaggcttaaagcagcttcct 459
                | |||| ||||  || |||||||||||
Sbjct: 12517626 atactccgaggtctagagcagcttcct 12517652



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 525      gggttcaacgatgttaccaacatcaaagact 555
                |||||||| ||||| ||||||||||||||||
Sbjct: 12518157 gggttcaaagatgtcaccaacatcaaagact 12518187
to top
>ref|NM_130319.2| Arabidopsis thaliana FUM1 (FUMARASE 1); catalytic/ fumarate hydratase
            AT2G47510 (FUM1) mRNA, complete cds
          Length = 1830

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1522 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1463

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
            || || ||||| || ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1462 tacccgattttcggattcaatgatgtcacaagcataagagactcgtgcaa 1413
to top
>gb|AY062460.1| Arabidopsis thaliana putative fumarase (At2g47510; T30B22.19) mRNA,
            complete cds
          Length = 1829

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1522 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1463

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
            || || ||||| || ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1462 tacccgattttcggattcaatgatgtcacaagcataagagactcgtgcaa 1413
to top
>gb|AY054252.1| Arabidopsis thaliana At2g47510/T30B22.19 mRNA, complete cds
          Length = 1739

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1478 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1419

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
            || || ||||| || ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1418 tacccgattttcggattcaatgatgtcacaagcataagagactcgtgcaa 1369
to top
>emb|BX819986.1|CNS0A806 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS57ZE06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1638

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1423 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1364

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
            || || ||||| || ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1363 tacccgattttcggattcaatgatgtcacaagcataagagactcgtgcaa 1314
to top
>gb|BT003361.1| Arabidopsis thaliana putative fumarase (At2g47510) mRNA, complete cds
          Length = 1512

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1397 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1338

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
            || || ||||| || ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1337 tacccgattttcggattcaatgatgtcacaagcataagagactcgtgcaa 1288
to top
>ref|NM_180835.1| Arabidopsis thaliana catalytic/ fumarate hydratase AT5G50950
            transcript variant AT5G50950.1 mRNA, complete cds
          Length = 1616

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 470  tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaattttggggtt 529
            |||||||||||||||| | || || || |||||||||||||||||||||||||| || ||
Sbjct: 1444 tccttctttgtgagctcttttggctactgctgcagcattgtcatagccaattttaggatt 1385

                                             
Query: 530  caacgatgttaccaacatcaaagactcgtgcaa 562
            ||| ||||| || | ||| | ||||||||||||
Sbjct: 1384 caatgatgtcacaagcataagagactcgtgcaa 1352
to top
>ref|NM_124474.2| Arabidopsis thaliana catalytic/ fumarate hydratase AT5G50950
            transcript variant AT5G50950.2 mRNA, complete cds
          Length = 1833

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 470  tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaattttggggtt 529
            |||||||||||||||| | || || || |||||||||||||||||||||||||| || ||
Sbjct: 1444 tccttctttgtgagctcttttggctactgctgcagcattgtcatagccaattttaggatt 1385

                                             
Query: 530  caacgatgttaccaacatcaaagactcgtgcaa 562
            ||| ||||| || | ||| | ||||||||||||
Sbjct: 1384 caatgatgtcacaagcataagagactcgtgcaa 1352
to top
>gb|AY113070.1| Arabidopsis thaliana AT5g50950/K3K7_11 mRNA, complete cds
          Length = 1500

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 470  tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaattttggggtt 529
            |||||||||||||||| | || || || |||||||||||||||||||||||||| || ||
Sbjct: 1401 tccttctttgtgagctcttttggctactgctgcagcattgtcatagccaattttaggatt 1342

                                             
Query: 530  caacgatgttaccaacatcaaagactcgtgcaa 562
            ||| ||||| || | ||| | ||||||||||||
Sbjct: 1341 caatgatgtcacaagcataagagactcgtgcaa 1309



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 371  ttaatcagaagggccaatcattttctctggaacaac 406
            ||||||||| || |||||||| ||||| ||||||||
Sbjct: 1500 ttaatcagatggaccaatcatcttctcgggaacaac 1465
to top
>gb|AY052197.1| Arabidopsis thaliana AT5g50950/K3K7_11 mRNA, complete cds
          Length = 1832

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 470  tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaattttggggtt 529
            |||||||||||||||| | || || || |||||||||||||||||||||||||| || ||
Sbjct: 1444 tccttctttgtgagctcttttggctactgctgcagcattgtcatagccaattttaggatt 1385

                                             
Query: 530  caacgatgttaccaacatcaaagactcgtgcaa 562
            ||| ||||| || | ||| | ||||||||||||
Sbjct: 1384 caatgatgtcacaagcataagagactcgtgcaa 1352
to top
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
             sequence
          Length = 98937

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 470   tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
             ||||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 46894 tccttctttgtgagctttcttggcaactgctgcagcattgtcatacccgatttt 46947
to top
>gb|AF020303.1|AF020303 Arabidopsis thaliana fumarase (FUM1) gene, complete cds
          Length = 3582

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                  
Query: 470  tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
            ||||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 3305 tccttctttgtgagctttcttggcaactgctgcagcattgtcatacccgatttt 3252
to top
>gb|U82202.1|ATU82202 Arabidopsis thaliana fumarase (FUM1) mRNA, complete cds
          Length = 1770

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                        
Query: 453  gcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcattgtca 512
            |||||||||| |||   ||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1477 gcttccttcaatgtacatccttctttgtgagctttcttggcaactgctgcagcattgtca 1418

                                                              
Query: 513  tagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaa 562
             | || |||||  | ||||| ||||| || | ||| | ||||||||||||
Sbjct: 1417 cacccgattttccgattcaatgatgtcacaagcataagagactcgtgcaa 1368
to top
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
          Length = 68726

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 470   tccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaatttt 523
             |||||||||||||||| | || || || ||||||||||||||||||||||||||
Sbjct: 35833 tccttctttgtgagctcttttggctactgctgcagcattgtcatagccaatttt 35780
to top
>emb|X91615.1|STFUM1 S.tuberosum mRNA for fumarase
          Length = 1865

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 449  agcagcttccttcagtgttgttccttctttgtgagctttcttagcaacagctgcagcatt 508
            ||||||||||||||   | ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct: 1469 agcagcttccttcaaactggttccctccttgtgggctttcttggcaactgcagcagcatt 1410

                                                                     
Query: 509  gtcatagccaattttggggttcaacgatgttaccaacatcaaagactcgtgcaacaa 565
             ||||| |||||||| ||||||||  |||| || | ||| |  ||||||||||||||
Sbjct: 1409 atcataaccaatttttgggttcaaacatgtaacgagcatgagtgactcgtgcaacaa 1353
to top
>gb|AC152115.2| Pichia stipitis clone JGIAHYZ-21P12, complete sequence
          Length = 39461

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 507   ttgtcatagccaattttggggttcaacgatgttaccaacatcaaagactcgt 558
             ||||| |||||||| ||||||||||| |  || ||||||||||| |||||||
Sbjct: 38835 ttgtcgtagccaatcttggggttcaaggcagtgaccaacatcaatgactcgt 38784
to top
>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence
          Length = 195428

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 458   cttcagtgttgttccttctttgt 480
             |||||||||||||||||||||||
Sbjct: 80816 cttcagtgttgttccttctttgt 80838
to top
>gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, complete sequence
          Length = 172806

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 46     ttctatttgtcctctatagatgaatg 71
              ||||||||||||| ||||||||||||
Sbjct: 130512 ttctatttgtcctgtatagatgaatg 130487
to top
>gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete sequence
          Length = 143148

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 559   gcaacaaattgtgaaattctct 580
             ||||||||||||||||||||||
Sbjct: 89920 gcaacaaattgtgaaattctct 89941
to top
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              8/17
          Length = 349652

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 471    ccttctttgtgagctttcttagcaacagctgcagcattgtcatagccaat 520
              |||||||| || |||||||||||||   ||||||| |||||||| |||||
Sbjct: 339337 ccttctttatgggctttcttagcaatttctgcagctttgtcataaccaat 339386
to top
>gb|AC106720.8| Homo sapiens 3 BAC RP11-26M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92354

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 296   ggcttgccttatttacagatgg 317
             ||||||||||||||||||||||
Sbjct: 21886 ggcttgccttatttacagatgg 21907
to top
>gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, complete sequence
          Length = 182667

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 216    acaggaaaaaatgtttttctc 236
              |||||||||||||||||||||
Sbjct: 136048 acaggaaaaaatgtttttctc 136068
to top
>gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosome 9, complete sequence
          Length = 215017

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 209    atgattaacaggaaaaaatgttttt 233
              |||||||||||||||||||| ||||
Sbjct: 184466 atgattaacaggaaaaaatgctttt 184490
to top
>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3
          Length = 250050

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     caagaacatgattacaatata 104
              |||||||||||||||||||||
Sbjct: 153035 caagaacatgattacaatata 153015
to top
>emb|CR318657.8| Zebrafish DNA sequence from clone DKEY-114G7 in linkage group 20,
              complete sequence
          Length = 151250

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    attaacaggaaaaaatgtttt 232
              |||||||||||||||||||||
Sbjct: 128516 attaacaggaaaaaatgtttt 128536
to top
>gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181178

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 561   aacaaattgtgaaattctctt 581
             |||||||||||||||||||||
Sbjct: 28911 aacaaattgtgaaattctctt 28891
to top
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 607     acagtttttctcaaaggatac 627
               |||||||||||||||||||||
Sbjct: 1059903 acagtttttctcaaaggatac 1059923
to top
>emb|AL929103.7| Zebrafish DNA sequence from clone CH211-122O8, complete sequence
          Length = 168630

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    attaacaggaaaaaatgtttt 232
              |||||||||||||||||||||
Sbjct: 156727 attaacaggaaaaaatgtttt 156747
to top
>emb|CT030148.2| Kuenenia stuttgartiensis genome fragment KUST_A (1 of 5)
          Length = 96717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tttcaagaacatgattacaat 101
             |||||||||||||||||||||
Sbjct: 75941 tttcaagaacatgattacaat 75961
to top
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete
              sequence
          Length = 316794

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 561    aacaaattgtgaaattctctt 581
              |||||||||||||||||||||
Sbjct: 292044 aacaaattgtgaaattctctt 292064
to top
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 421     ccttttccgtcaaaactctga 441
               |||||||||||||||||||||
Sbjct: 1827775 ccttttccgtcaaaactctga 1827795
to top
>gb|AC153990.2| Mus musculus 6 BAC RP24-293L1 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172768

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    acaggaaaaaatgtttttctc 236
              |||||||||||||||||||||
Sbjct: 169403 acaggaaaaaatgtttttctc 169383
to top
>dbj|AP003778.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-384C21, complete
             sequences
          Length = 183146

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   ttgtgcaaaattaactctcct 269
             |||||||||||||||||||||
Sbjct: 85340 ttgtgcaaaattaactctcct 85320
to top
>gb|AY956541.1| Twisted-stalk chlorotic streak virus isolate Skwentna polyprotein
           gene, partial cds
          Length = 727

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 547 tcaaagactcgtgcaacaaa 566
           ||||||||||||||||||||
Sbjct: 474 tcaaagactcgtgcaacaaa 493
to top
>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence
          Length = 198036

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tcatggggaaatgaagatgt 288
              ||||||||||||||||||||
Sbjct: 108619 tcatggggaaatgaagatgt 108600
to top
>gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, complete sequence
          Length = 215331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   tgttgttccttctttgtgag 483
             ||||||||||||||||||||
Sbjct: 52064 tgttgttccttctttgtgag 52083
to top
>ref|XM_734018.1| Plasmodium chabaudi chabaudi hypothetical protein (PC405006.00.0)
            partial mRNA
          Length = 1300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 580  ttatggtttgcttctatttc 599
            ||||||||||||||||||||
Sbjct: 1049 ttatggtttgcttctatttc 1030
to top
>gb|AC079440.38| Mus musculus strain 129/Sv clone ct7-340l7 map 2, complete sequence
          Length = 131387

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 567  ttgtgaaattctcttatggt 586
            ||||||||||||||||||||
Sbjct: 1060 ttgtgaaattctcttatggt 1041
to top
>emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on chromosome 10 Contains two
             novel genes, the gene for a novel protein (FLJ38694
             FLJ38681) and five CpG islands, complete sequence
          Length = 96891

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   tcaaaactctgaggcttaaagcag 453
             |||||| |||||||||||||||||
Sbjct: 35520 tcaaaagtctgaggcttaaagcag 35497
to top
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    atggggaaatgaagatgttt 290
              ||||||||||||||||||||
Sbjct: 455537 atggggaaatgaagatgttt 455518
to top
>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete
             sequence
          Length = 145052

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 438   ctgaggcttaaagcagcttccttc 461
             |||||| |||||||||||||||||
Sbjct: 98757 ctgaggattaaagcagcttccttc 98734
to top
>emb|AL445985.10| Human DNA sequence from clone RP11-45B20 on chromosome 13, complete
             sequence
          Length = 178531

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tttaatctggcttgccttat 307
             ||||||||||||||||||||
Sbjct: 75842 tttaatctggcttgccttat 75823
to top
>gb|AC148449.2| Xenopus tropicalis clone CH216-118D6, complete sequence
          Length = 165682

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 474   tctttgtgagctttcttagcaaca 497
             ||||||||||||||||||| ||||
Sbjct: 49347 tctttgtgagctttcttagaaaca 49324
to top
>gb|AC079097.6| Homo sapiens chromosome 8, clone RP11-98P2, complete sequence
          Length = 159256

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   cagtttttctcaaaggatac 627
             ||||||||||||||||||||
Sbjct: 82043 cagtttttctcaaaggatac 82062
to top
>gb|AC108693.5| Homo sapiens 3 BAC RP11-271C24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 100473

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ccgcattgggtaaaagttgg 150
             ||||||||||||||||||||
Sbjct: 91508 ccgcattgggtaaaagttgg 91527
to top
>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete
             sequence
          Length = 115747

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   ttgtgaaattctcttatggt 586
             ||||||||||||||||||||
Sbjct: 90312 ttgtgaaattctcttatggt 90293
to top
>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21,
              complete sequence
          Length = 207125

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 212    attaacaggaaaaaatgtttttct 235
              |||||||||| |||||||||||||
Sbjct: 157487 attaacaggacaaaatgtttttct 157510
to top
>emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, complete sequence
          Length = 232594

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 285   atgtttaatctggcttgccttatt 308
             |||||||||||||| |||||||||
Sbjct: 48529 atgtttaatctggcctgccttatt 48552
to top
>gb|AC016761.10| Homo sapiens BAC clone RP11-538A12 from 2, complete sequence
          Length = 159338

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    atgttaccaacatcaaagac 554
              ||||||||||||||||||||
Sbjct: 141142 atgttaccaacatcaaagac 141123
to top
>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence
          Length = 171653

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    tccttctatttgtcctctatagat 66
             ||||||||||| ||||||||||||
Sbjct: 74323 tccttctatttctcctctatagat 74300
to top
>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete
              sequence
          Length = 213629

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    ttgtgaaattctcttatggt 586
              ||||||||||||||||||||
Sbjct: 109507 ttgtgaaattctcttatggt 109488
to top
>emb|BX813325.2| Mouse DNA sequence from clone RP23-319D11 on chromosome X, complete
            sequence
          Length = 62720

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 579  cttatggtttgcttctattt 598
            ||||||||||||||||||||
Sbjct: 9018 cttatggtttgcttctattt 9037
to top
>emb|CR392338.16| Zebrafish DNA sequence from clone DKEY-262M9 in linkage group 3,
            complete sequence
          Length = 138425

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 573  aattctcttatggtttgctt 592
            ||||||||||||||||||||
Sbjct: 4116 aattctcttatggtttgctt 4135
to top
>gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosome 13, complete
             sequence
          Length = 229410

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   tgttgttccttctttgtgag 483
             ||||||||||||||||||||
Sbjct: 12608 tgttgttccttctttgtgag 12589
to top
>gb|AC154390.1| Mus musculus BAC clone RP23-10G24 from 13, complete sequence
          Length = 190233

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    tgttgttccttctttgtgag 483
              ||||||||||||||||||||
Sbjct: 160112 tgttgttccttctttgtgag 160131
to top
>emb|BX649397.8| Zebrafish DNA sequence from clone CH211-14J20 in linkage group 3,
             complete sequence
          Length = 171286

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 573   aattctcttatggtttgctt 592
             ||||||||||||||||||||
Sbjct: 83278 aattctcttatggtttgctt 83297
to top
>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete
             sequence
          Length = 233417

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   ttgtgaaattctcttatggt 586
             ||||||||||||||||||||
Sbjct: 33672 ttgtgaaattctcttatggt 33691
to top
>emb|Z82252.6|HSN91G8 Human DNA sequence from clone LL22NC03-91G8 on chromosome 22, complete
             sequence
          Length = 42528

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   attaacaggaaaaaatgttt 231
             ||||||||||||||||||||
Sbjct: 39556 attaacaggaaaaaatgttt 39575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,329,439
Number of Sequences: 3902068
Number of extensions: 7329439
Number of successful extensions: 140363
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 140107
Number of HSP's gapped (non-prelim): 249
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top