ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags37a20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 180 3e-42
3gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 180 3e-42
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
5ref|NM_104515.2| Arabidopsis thaliana translation release factor... 52 0.002
6gb|AY090252.1| Arabidopsis thaliana At1g56350/F14G9_3 mRNA sequence 52 0.002
7emb|BX816417.1|CNS0ABWP Arabidopsis thaliana Full-length cDNA Co... 52 0.002
8emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 46 0.13
9gb|AC127375.3| Mus musculus chromosome UNKNOWN clone RP23-48J17,... 44 0.50
10ref|XM_663281.1| Cryptosporidium hominis TU502 protein kinase do... 44 0.50
11gb|AY046045.1| Arabidopsis thaliana At3g30140 mRNA sequence 44 0.50
12emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chr... 44 0.50
13ref|XM_364069.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.0
14gb|AY809260.1| Schistosoma japonicum SJCHGC06293 protein mRNA, p... 42 2.0
15emb|CT025568.7| Mouse DNA sequence from clone RP23-374L19 on chr... 42 2.0
16emb|AL929288.4| Human DNA sequence from clone RP11-669M2 on chro... 42 2.0
17gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, comple... 42 2.0
18emb|BX649373.4| Zebrafish DNA sequence from clone CH211-270E10 i... 42 2.0
19emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.0
20emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, ... 42 2.0
21gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete... 40 7.8
22gb|AC154908.4| Mus musculus BAC clone RP23-315C11 from chromosom... 40 7.8
23gb|AF099000.1| Caenorhabditis elegans cosmid Y47G7B, complete se... 40 7.8
24gb|AY813462.1| Schistosoma japonicum SJCHGC05870 protein mRNA, c... 40 7.8
25gb|AC004880.1| Homo sapiens PAC clone RP4-759N11 from 7, complet... 40 7.8
26ref|XM_448331.1| Candida glabrata CBS138, CAGL0K02431g partial mRNA 40 7.8
27emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230... 40 7.8
28gb|AC125351.3| Mus musculus BAC clone RP23-442M3 from chromosome... 40 7.8
29gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complet... 40 7.8
30emb|CR718030.2|CNS0GGZ8 Tetraodon nigroviridis full-length cDNA 40 7.8
31emb|CR717946.2|CNS0GGWW Tetraodon nigroviridis full-length cDNA 40 7.8
32gb|AC146010.2| Pan troglodytes BAC clone RP43-16O20 from 7, comp... 40 7.8
33emb|CR715191.2|CNS0GESJ Tetraodon nigroviridis full-length cDNA 40 7.8
34emb|CR715154.2|CNS0GERI Tetraodon nigroviridis full-length cDNA 40 7.8
35emb|CR711518.2|CNS0GBYI Tetraodon nigroviridis full-length cDNA 40 7.8
36emb|CR714145.2|CNS0GDZH Tetraodon nigroviridis full-length cDNA 40 7.8
37emb|CR714049.2|CNS0GDWT Tetraodon nigroviridis full-length cDNA 40 7.8
38emb|CR710150.2|CNS0GAWI Tetraodon nigroviridis full-length cDNA 40 7.8
39emb|CR709990.2|CNS0GAS2 Tetraodon nigroviridis full-length cDNA 40 7.8
40emb|CR708975.2|CNS0G9ZV Tetraodon nigroviridis full-length cDNA 40 7.8
41emb|CR707643.2|CNS0G8YV Tetraodon nigroviridis full-length cDNA 40 7.8
42emb|CR706991.2|CNS0G8GR Tetraodon nigroviridis full-length cDNA 40 7.8
43emb|CR706677.2|CNS0G881 Tetraodon nigroviridis full-length cDNA 40 7.8
44emb|CR706158.2|CNS0G7TM Tetraodon nigroviridis full-length cDNA 40 7.8
45ref|XM_664343.1| Plasmodium berghei strain ANKA hypothetical pro... 40 7.8
46gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 7.8
47gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1... 40 7.8
48emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chro... 40 7.8
49emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 7.8
50emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in l... 40 7.8
51gb|AC093573.17| Pan troglodytes clone rp43-32j20, complete sequence 40 7.8
52gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park C... 40 7.8
53gb|AC008132.35| Homo sapiens chromosome 22 clone pac995o6 map 22... 40 7.8
54gb|AC009288.15| Homo sapiens chromosome 22 clone p413m7 map 22q1... 40 7.8
55gb|AC023491.23| Homo sapiens chromosome 22 clone b659m11 map 22q... 40 7.8
56gb|AC007708.13| Homo sapiens chromosome 22 clone b563b9 map 22q1... 40 7.8
57gb|AC007325.51| Homo sapiens chromosome 22 clone b48 map 22q11, ... 40 7.8
58gb|AC008018.20| Homo sapiens chromosome 22 clone b379n11 map 22q... 40 7.8
59gb|AC007981.47| Homo sapiens chromosome 22 clone b291 map 22q11,... 40 7.8
60gb|AC012330.10| Homo sapiens clone b2262a2, complete sequence 40 7.8
61gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11... 40 7.8
62gb|AC027612.6| Homo sapiens BAC clone RP11-165D20 from 2, comple... 40 7.8
63gb|AC005283.2|AC005283 Homo sapiens PAC clone RP5-1039L24 from 7... 40 7.8
64gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete g... 40 7.8
65gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 7.8
66gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome... 40 7.8
67gb|AC140472.3| Mus musculus BAC clone RP24-403L12 from chromosom... 40 7.8
68emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chr... 40 7.8
69emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chro... 40 7.8
70emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chr... 40 7.8
71dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.8
72gb|AC159234.2| Mus musculus BAC clone RP24-432D6 from chromosome... 40 7.8
73gb|AC008868.4| Homo sapiens chromosome 5 clone CTD-2194F4, compl... 40 7.8
74dbj|AP000550.1| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 7.8 
>dbj|AK073807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I07, full
            insert sequence
          Length = 1870

 Score =  254 bits (128), Expect = 3e-64
 Identities = 206/232 (88%)
 Strand = Plus / Minus

                                                                        
Query: 345  atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
            ||||||||||||||||| || |  ||||||||||| || || || ||||| |||||||||
Sbjct: 1392 atgaaatcatctaggtccccattgaggactgaatcagggtcggatacttcgtagtttgtc 1333

                                                                        
Query: 405  cggagatctttgaccattcggtatggctgtagcacatacgatcttatttggtttccccag 464
            ||||||||||||||||| || ||||| || || ||||| |||||||||||||||||||||
Sbjct: 1332 cggagatctttgaccatacgatatggatggagtacataagatcttatttggtttccccag 1273

                                                                        
Query: 465  cttatttcagagagtgattgcgtgtgctctgcattcatctgtgcttgacgggtaatctca 524
            || ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||
Sbjct: 1272 ctgatttcagagagtgattgcgtgtggtctgcattcatctgtgcttggcgggcaatctca 1213

                                                                
Query: 525  agctggtccaatctagattgcagcacagccattgctgatgccctattcatat 576
            ||||||||||  | ||| || ||||| ||||||||||||||| |||||||||
Sbjct: 1212 agctggtccagccgagactggagcactgccattgctgatgccttattcatat 1161
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  180 bits (91), Expect = 3e-42
 Identities = 127/139 (91%)
 Strand = Plus / Minus

                                                                            
Query: 438      acatacgatcttatttggtttccccagcttatttcagagagtgattgcgtgtgctctgca 497
                ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 10824829 acataagatcttatttggtttccccagctgatttcagagagtgattgcgtgtggtctgca 10824770

                                                                            
Query: 498      ttcatctgtgcttgacgggtaatctcaagctggtccaatctagattgcagcacagccatt 557
                |||||||||||||| |||| |||||||||||||||||  | ||| || ||||| ||||||
Sbjct: 10824769 ttcatctgtgcttggcgggcaatctcaagctggtccagccgagactggagcactgccatt 10824710

                                   
Query: 558      gctgatgccctattcatat 576
                ||||||||| |||||||||
Sbjct: 10824709 gctgatgccttattcatat 10824691



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 345      atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
                ||||||||||||||||| || |  ||||||||||| || || || ||||| |||||||||
Sbjct: 10825263 atgaaatcatctaggtccccattgaggactgaatcagggtcggatacttcgtagtttgtc 10825204

                                             
Query: 405      cggagatctttgaccattcggtatggctg 433
                ||||||||||||||||| || ||||||||
Sbjct: 10825203 cggagatctttgaccatacgatatggctg 10825175
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score =  180 bits (91), Expect = 3e-42
 Identities = 127/139 (91%)
 Strand = Plus / Plus

                                                                         
Query: 438   acatacgatcttatttggtttccccagcttatttcagagagtgattgcgtgtgctctgca 497
             ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 30058 acataagatcttatttggtttccccagctgatttcagagagtgattgcgtgtggtctgca 30117

                                                                         
Query: 498   ttcatctgtgcttgacgggtaatctcaagctggtccaatctagattgcagcacagccatt 557
             |||||||||||||| |||| |||||||||||||||||  | ||| || ||||| ||||||
Sbjct: 30118 ttcatctgtgcttggcgggcaatctcaagctggtccagccgagactggagcactgccatt 30177

                                
Query: 558   gctgatgccctattcatat 576
             ||||||||| |||||||||
Sbjct: 30178 gctgatgccttattcatat 30196



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                         
Query: 345   atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
             ||||||||||||||||| || |  ||||||||||| || || || ||||| |||||||||
Sbjct: 29624 atgaaatcatctaggtccccattgaggactgaatcagggtcggatacttcgtagtttgtc 29683

                                          
Query: 405   cggagatctttgaccattcggtatggctg 433
             ||||||||||||||||| || ||||||||
Sbjct: 29684 cggagatctttgaccatacgatatggctg 29712
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  180 bits (91), Expect = 3e-42
 Identities = 127/139 (91%)
 Strand = Plus / Minus

                                                                            
Query: 438      acatacgatcttatttggtttccccagcttatttcagagagtgattgcgtgtgctctgca 497
                ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 10822930 acataagatcttatttggtttccccagctgatttcagagagtgattgcgtgtggtctgca 10822871

                                                                            
Query: 498      ttcatctgtgcttgacgggtaatctcaagctggtccaatctagattgcagcacagccatt 557
                |||||||||||||| |||| |||||||||||||||||  | ||| || ||||| ||||||
Sbjct: 10822870 ttcatctgtgcttggcgggcaatctcaagctggtccagccgagactggagcactgccatt 10822811

                                   
Query: 558      gctgatgccctattcatat 576
                ||||||||| |||||||||
Sbjct: 10822810 gctgatgccttattcatat 10822792



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 345      atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
                ||||||||||||||||| || |  ||||||||||| || || || ||||| |||||||||
Sbjct: 10823364 atgaaatcatctaggtccccattgaggactgaatcagggtcggatacttcgtagtttgtc 10823305

                                             
Query: 405      cggagatctttgaccattcggtatggctg 433
                ||||||||||||||||| || ||||||||
Sbjct: 10823304 cggagatctttgaccatacgatatggctg 10823276
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>ref|NM_104515.2| Arabidopsis thaliana translation release factor/ translation release
            factor, codon specific AT1G56350 mRNA, complete cds
          Length = 1511

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                        
Query: 345  atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
            |||||| |||||| ||| ||||| || || || || |||||||| || || ||||| || 
Sbjct: 1462 atgaaaccatctaagtctccttcaagaaccgagtcaggatcagagacctcgtagttggtt 1403

                                                                        
Query: 405  cggagatctttgaccattcggtatggctgtagcacatacgatcttatttggtttccccag 464
            || ||||| || ||||||| |||||| || || ||||| | || ||| ||||||||||||
Sbjct: 1402 cgcagatccttcaccattctgtatggatggagaacataagttcgtatctggtttccccag 1343

              
Query: 465  ct 466
            ||
Sbjct: 1342 ct 1341
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>gb|AY090252.1| Arabidopsis thaliana At1g56350/F14G9_3 mRNA sequence
          Length = 1615

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                        
Query: 345  atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
            |||||| |||||| ||| ||||| || || || || |||||||| || || ||||| || 
Sbjct: 1496 atgaaaccatctaagtctccttcaagaaccgagtcaggatcagagacctcgtagttggtt 1437

                                                                        
Query: 405  cggagatctttgaccattcggtatggctgtagcacatacgatcttatttggtttccccag 464
            || ||||| || ||||||| |||||| || || ||||| | || ||| ||||||||||||
Sbjct: 1436 cgcagatccttcaccattctgtatggatggagaacataagttcgtatctggtttccccag 1377

              
Query: 465  ct 466
            ||
Sbjct: 1376 ct 1375
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>emb|BX816417.1|CNS0ABWP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH47ZB11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1639

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                        
Query: 345  atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
            |||||| |||||| ||| ||||| || || || || |||||||| || || ||||| || 
Sbjct: 1442 atgaaaccatctaagtctccttcaagaaccgagtcaggatcagagacctcgtagttggtt 1383

                                                                        
Query: 405  cggagatctttgaccattcggtatggctgtagcacatacgatcttatttggtttccccag 464
            || ||||| || ||||||| |||||| || || ||||| | || ||| ||||||||||||
Sbjct: 1382 cgcagatccttcaccattctgtatggatggagaacataagttcgtatctggtttccccag 1323

              
Query: 465  ct 466
            ||
Sbjct: 1322 ct 1321
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>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             3/8
          Length = 347625

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 393   tcatagtttgtccggagatctttgaccattcggtatggctgtagcacatacgatcttatt 452
             ||||||||||| || |||||||| |||||| | ||||| || |||||||| || |  |||
Sbjct: 32980 tcatagtttgtacgcagatcttttaccatttgatatgggtgcagcacataggagcgcatt 32921

                        
Query: 453   tggtttcccca 463
             ||||| |||||
Sbjct: 32920 tggttgcccca 32910
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>gb|AC127375.3| Mus musculus chromosome UNKNOWN clone RP23-48J17, complete sequence
          Length = 160811

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 522    tcaagctggtccaatctagatt 543
              ||||||||||||||||||||||
Sbjct: 106879 tcaagctggtccaatctagatt 106900
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>ref|XM_663281.1| Cryptosporidium hominis TU502 protein kinase domain (Chro.10319)
            partial mRNA
          Length = 3468

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  cactttcatcaactttatccaa 322
            ||||||||||||||||||||||
Sbjct: 3181 cactttcatcaactttatccaa 3160
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>gb|AY046045.1| Arabidopsis thaliana At3g30140 mRNA sequence
          Length = 1322

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 97/122 (79%)
 Strand = Plus / Minus

                                                                        
Query: 345  atgaaatcatctaggtcgccttccaggactgaatcgggatcagacacttcatagtttgtc 404
            |||||| |||||| ||| ||||| || || || || |||||||| || || |||||||| 
Sbjct: 1107 atgaaaccatctaagtctccttcaagaaccgagtcaggatcagagacctcgtagtttgtt 1048

                                                                        
Query: 405  cggagatctttgaccattcggtatggctgtagcacatacgatcttatttggtttccccag 464
            |  ||||| || ||||||| |||| | || || ||||| | || ||| ||||||||||||
Sbjct: 1047 ctcagatccttcaccattctgtattgatggagaacataagttcgtatctggtttccccag 988

              
Query: 465  ct 466
            ||
Sbjct: 987  ct 986
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>emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chromosome X, complete
              sequence
          Length = 212455

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 522    tcaagctggtccaatctagatt 543
              ||||||||||||||||||||||
Sbjct: 170658 tcaagctggtccaatctagatt 170679
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>ref|XM_364069.1| Magnaporthe grisea 70-15 hypothetical protein (MG08914.4) partial
            mRNA
          Length = 3282

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  agatctttgaccattcggtat 428
            |||||||||||||||||||||
Sbjct: 3230 agatctttgaccattcggtat 3210
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>gb|AY809260.1| Schistosoma japonicum SJCHGC06293 protein mRNA, partial cds
          Length = 2198

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 4    aatatataaatgaaaatatag 24
            |||||||||||||||||||||
Sbjct: 1269 aatatataaatgaaaatatag 1249
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>emb|CT025568.7| Mouse DNA sequence from clone RP23-374L19 on chromosome 9, complete
             sequence
          Length = 183916

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 198   tgtatttgtcagagtagtaaagaaa 222
             ||||||||||||| |||||||||||
Sbjct: 30622 tgtatttgtcagactagtaaagaaa 30646
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>emb|AL929288.4| Human DNA sequence from clone RP11-669M2 on chromosome 1 Contains the
             3' end of a novel gene and apolipoprotein L 3 (APOL3)
             pseudogene, complete sequence
          Length = 172898

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   tggtttttcttcagacacttt 306
             |||||||||||||||||||||
Sbjct: 20167 tggtttttcttcagacacttt 20147
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>gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, complete sequence
          Length = 171521

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 198    tgtatttgtcagagtagtaaagaaa 222
              ||||||||||||| |||||||||||
Sbjct: 128667 tgtatttgtcagactagtaaagaaa 128691
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>emb|BX649373.4| Zebrafish DNA sequence from clone CH211-270E10 in linkage group 22,
             complete sequence
          Length = 49940

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     taatatataaatgaaaatata 23
             |||||||||||||||||||||
Sbjct: 27480 taatatataaatgaaaatata 27500
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>emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M6 (ESSAII project)
          Length = 93353

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     atatataaatgaaaatatagg 25
             |||||||||||||||||||||
Sbjct: 80492 atatataaatgaaaatatagg 80512
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>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76
          Length = 165698

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      atatataaatgaaaatatagg 25
              |||||||||||||||||||||
Sbjct: 119871 atatataaatgaaaatatagg 119851
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>gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete sequence
          Length = 169201

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 61438 aatatataaatgaaaatata 61419
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>gb|AC154908.4| Mus musculus BAC clone RP23-315C11 from chromosome 12, complete sequence
          Length = 169650

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      atatataaatgaaaatatag 24
              ||||||||||||||||||||
Sbjct: 144589 atatataaatgaaaatatag 144608
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>gb|AF099000.1| Caenorhabditis elegans cosmid Y47G7B, complete sequence
          Length = 11813

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atatataaatgaaaatatag 24
             ||||||||||||||||||||
Sbjct: 11274 atatataaatgaaaatatag 11255
to top
>gb|AY813462.1| Schistosoma japonicum SJCHGC05870 protein mRNA, complete cds
          Length = 764

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   taatatataaatgaaaatataggt 26
           ||||||||||||| ||||||||||
Sbjct: 741 taatatataaatgcaaatataggt 718
to top
>gb|AC004880.1| Homo sapiens PAC clone RP4-759N11 from 7, complete sequence
          Length = 93418

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agtaatatataaatgaaaat 20
             ||||||||||||||||||||
Sbjct: 10277 agtaatatataaatgaaaat 10258
to top
>ref|XM_448331.1| Candida glabrata CBS138, CAGL0K02431g partial mRNA
          Length = 2775

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  ctttcatcaactttatccaa 322
            ||||||||||||||||||||
Sbjct: 2117 ctttcatcaactttatccaa 2098
to top
>emb|CR937048.1|RN139I21 Rattus norvegicus chromosome 1 BAC CH230-139I21, complete sequence
          Length = 212885

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 106789 aatatataaatgaaaatata 106808
to top
>gb|AC125351.3| Mus musculus BAC clone RP23-442M3 from chromosome 12, complete
           sequence
          Length = 188024

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   atatataaatgaaaatatag 24
           ||||||||||||||||||||
Sbjct: 426 atatataaatgaaaatatag 445
to top
>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence
          Length = 225940

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      taatatataaatgaaaatataggt 26
              |||| |||||||||||||||||||
Sbjct: 172106 taatttataaatgaaaatataggt 172083
to top
>emb|CR718030.2|CNS0GGZ8 Tetraodon nigroviridis full-length cDNA
          Length = 723

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 166 cgttgtatttgtcagaatagtaaa 143
to top
>emb|CR717946.2|CNS0GGWW Tetraodon nigroviridis full-length cDNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 157 cgttgtatttgtcagaatagtaaa 134
to top
>gb|AC146010.2| Pan troglodytes BAC clone RP43-16O20 from 7, complete sequence
          Length = 156080

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 117118 aatatataaatgaaaatata 117137
to top
>emb|CR715191.2|CNS0GESJ Tetraodon nigroviridis full-length cDNA
          Length = 727

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 170 cgttgtatttgtcagaatagtaaa 147
to top
>emb|CR715154.2|CNS0GERI Tetraodon nigroviridis full-length cDNA
          Length = 616

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 112 cgttgtatttgtcagaatagtaaa 89
to top
>emb|CR711518.2|CNS0GBYI Tetraodon nigroviridis full-length cDNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 157 cgttgtatttgtcagaatagtaaa 134
to top
>emb|CR714145.2|CNS0GDZH Tetraodon nigroviridis full-length cDNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 157 cgttgtatttgtcagaatagtaaa 134
to top
>emb|CR714049.2|CNS0GDWT Tetraodon nigroviridis full-length cDNA
          Length = 702

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 145 cgttgtatttgtcagaatagtaaa 122
to top
>emb|CR710150.2|CNS0GAWI Tetraodon nigroviridis full-length cDNA
          Length = 742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 185 cgttgtatttgtcagaatagtaaa 162
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>emb|CR709990.2|CNS0GAS2 Tetraodon nigroviridis full-length cDNA
          Length = 645

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 170 cgttgtatttgtcagaatagtaaa 147
to top
>emb|CR708975.2|CNS0G9ZV Tetraodon nigroviridis full-length cDNA
          Length = 666

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 109 cgttgtatttgtcagaatagtaaa 86
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>emb|CR707643.2|CNS0G8YV Tetraodon nigroviridis full-length cDNA
          Length = 606

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 48  cgttgtatttgtcagaatagtaaa 25
to top
>emb|CR706991.2|CNS0G8GR Tetraodon nigroviridis full-length cDNA
          Length = 688

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 131 cgttgtatttgtcagaatagtaaa 108
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>emb|CR706677.2|CNS0G881 Tetraodon nigroviridis full-length cDNA
          Length = 705

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 148 cgttgtatttgtcagaatagtaaa 125
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>emb|CR706158.2|CNS0G7TM Tetraodon nigroviridis full-length cDNA
          Length = 727

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 195 cgttgtatttgtcagagtagtaaa 218
           |||||||||||||||| |||||||
Sbjct: 170 cgttgtatttgtcagaatagtaaa 147
to top
>ref|XM_664343.1| Plasmodium berghei strain ANKA hypothetical protein (PB301018.00.0)
           partial mRNA
          Length = 591

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   atatataaatgaaaatatag 24
           ||||||||||||||||||||
Sbjct: 555 atatataaatgaaaatatag 574
to top
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      atatataaatgaaaatatag 24
              ||||||||||||||||||||
Sbjct: 589206 atatataaatgaaaatatag 589187
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>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
             sequence
          Length = 250078

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 78038 aatatataaatgaaaatata 78057
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>emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chromosome 1 Contains the
             5' end of a nucleosome assembly protein 1-like 4 (NAP1L4)
             pseudogene, the 5' end of the CD58  gene for CD58 antigen,
             (lymphocyte function-associated antigen 3), the 3' end of
             the IGSF3 gene for immunoglobulin superfamily member 3 and
             a CpG island, complete sequence
          Length = 88484

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 84667 aatatataaatgaaaatata 84686
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ctttcatcaactttatccaa 322
              ||||||||||||||||||||
Sbjct: 219685 ctttcatcaactttatccaa 219704
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>emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in linkage group 24,
             complete sequence
          Length = 59900

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 55743 aatatataaatgaaaatata 55762
to top
>gb|AC093573.17| Pan troglodytes clone rp43-32j20, complete sequence
          Length = 170502

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 39947 aatatataaatgaaaatata 39966
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>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177115

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gatagacatggtttttcttc 297
              ||||||||||||||||||||
Sbjct: 100114 gatagacatggtttttcttc 100133
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>gb|AC008132.35| Homo sapiens chromosome 22 clone pac995o6 map 22q11, complete sequence
          Length = 145598

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 87347 aatatataaatgaaaatata 87366
to top
>gb|AC009288.15| Homo sapiens chromosome 22 clone p413m7 map 22q11, complete sequence
          Length = 140876

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    aatatataaatgaaaatata 23
            ||||||||||||||||||||
Sbjct: 2399 aatatataaatgaaaatata 2418
to top
>gb|AC023491.23| Homo sapiens chromosome 22 clone b659m11 map 22q11, complete sequence
          Length = 150754

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 64190 aatatataaatgaaaatata 64171
to top
>gb|AC007708.13| Homo sapiens chromosome 22 clone b563b9 map 22q11, complete sequence
          Length = 106650

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    aatatataaatgaaaatata 23
            ||||||||||||||||||||
Sbjct: 4243 aatatataaatgaaaatata 4262
to top
>gb|AC007325.51| Homo sapiens chromosome 22 clone b48 map 22q11, complete sequence
          Length = 165050

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 22632 aatatataaatgaaaatata 22651
to top
>gb|AC008018.20| Homo sapiens chromosome 22 clone b379n11 map 22q11, complete sequence
          Length = 180884

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 150340 aatatataaatgaaaatata 150359
to top
>gb|AC007981.47| Homo sapiens chromosome 22 clone b291 map 22q11, complete sequence
          Length = 175358

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 82517 aatatataaatgaaaatata 82536
to top
>gb|AC012330.10| Homo sapiens clone b2262a2, complete sequence
          Length = 105288

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 68930 aatatataaatgaaaatata 68911
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>gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11, complete sequence
          Length = 183085

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 87012 aatatataaatgaaaatata 87031
to top
>gb|AC027612.6| Homo sapiens BAC clone RP11-165D20 from 2, complete sequence
          Length = 158052

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 67317 aatatataaatgaaaatata 67336
to top
>gb|AC005283.2|AC005283 Homo sapiens PAC clone RP5-1039L24 from 7, complete sequence
          Length = 126270

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aatatataaatgaaaatata 23
             ||||||||||||||||||||
Sbjct: 49196 aatatataaatgaaaatata 49215
to top
>gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete genome
          Length = 232392

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 139393 aatatataaatgaaaatata 139374
to top
>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 390     acttcatagtttgtccggagatctttgaccat 421
               |||||||||||||||||  ||||||| |||||
Sbjct: 1249722 acttcatagtttgtccgatgatctttcaccat 1249753
to top
>gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome unknown, complete
              sequence
          Length = 190953

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tatataaatgaaaatatagg 25
              ||||||||||||||||||||
Sbjct: 173168 tatataaatgaaaatatagg 173187
to top
>gb|AC140472.3| Mus musculus BAC clone RP24-403L12 from chromosome unknown, complete
              sequence
          Length = 166884

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tatataaatgaaaatatagg 25
              ||||||||||||||||||||
Sbjct: 165074 tatataaatgaaaatatagg 165055
to top
>emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chromosome 22, complete
              sequence
          Length = 186858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 140803 aatatataaatgaaaatata 140822
to top
>emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chromosome X, complete
            sequence
          Length = 199534

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    agtaatatataaatgaaaat 20
            ||||||||||||||||||||
Sbjct: 2688 agtaatatataaatgaaaat 2707
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>emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chromosome X, complete
            sequence
          Length = 113887

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    tatataaatgaaaatatagg 25
            ||||||||||||||||||||
Sbjct: 3834 tatataaatgaaaatatagg 3815
to top
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete
              sequences
          Length = 211652

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 175219 aatatataaatgaaaatata 175200
to top
>gb|AC159234.2| Mus musculus BAC clone RP24-432D6 from chromosome 12, complete sequence
          Length = 152905

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   cttactgttagttgggcact 248
             ||||||||||||||||||||
Sbjct: 96147 cttactgttagttgggcact 96128
to top
>gb|AC008868.4| Homo sapiens chromosome 5 clone CTD-2194F4, complete sequence
          Length = 123698

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    ttattatattgcctctctaa 61
             ||||||||||||||||||||
Sbjct: 33533 ttattatattgcctctctaa 33514
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>dbj|AP000550.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
              clone:KB1592A4
          Length = 150724

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aatatataaatgaaaatata 23
              ||||||||||||||||||||
Sbjct: 132284 aatatataaatgaaaatata 132303


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,069,867
Number of Sequences: 3902068
Number of extensions: 6069867
Number of successful extensions: 115981
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115720
Number of HSP's gapped (non-prelim): 261
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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