ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags37a13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109207.1| Zea mays PCO127219 mRNA sequence Length = 611 Score = 178 bits (90), Expect = 1e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 409 cttgatccagccattggcgaaggcgatggcgaggatgacgaagggggtggacatgccgaa 350 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctccccggcagt 285 ||||| |||||||||||| || |||||||||||||||||||||| ||||||||| || || Sbjct: 349 gatgatgatgtagggcaggggtgtcatcatggggttctccccctccctctcccccgcggt 290 Query: 286 ctgccagtac 295 |||||||||| Sbjct: 289 ctgccagtac 280 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 408 tactgctctggctcctgttctctggtgatgaacttc 443 ||||| |||||||||| ||| |||||||||||||| Sbjct: 282 tactgttctggctcctcttccttggtgatgaacttc 247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| ||||| |||||||||||||||||||||| |||||| || || | ||| || Sbjct: 21958608 cttgatccagccattagcgaaggcgatggcgaggatgacgaagggcgtcgacatgccaaa 21958667 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctccccggcagt 285 ||||| |||||||||||| |||||| |||| |||||||| |||||||||||||| || | Sbjct: 21958668 gatgatgatgtagggcagcggcgtcttcatcgggttctcgcccttcctctcccctgccgc 21958727 Query: 286 ctgccagtacct 297 |||||| ||||| Sbjct: 21958728 ctgccaatacct 21958739 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 403 ttgcttactgctctggctcctgttctctggtgatgaacttctt 445 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21958899 ttgcttactgctctggctcctcttctctggtgatgaacttctt 21958941 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 25261097 ctccacctccacctccaccgccaccaccg 25261069
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| ||||| |||||||||||||||||||||| |||||| || || | ||| || Sbjct: 21951637 cttgatccagccattagcgaaggcgatggcgaggatgacgaagggcgtcgacatgccaaa 21951696 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctccccggcagt 285 ||||| |||||||||||| |||||| |||| |||||||| |||||||||||||| || | Sbjct: 21951697 gatgatgatgtagggcagcggcgtcttcatcgggttctcgcccttcctctcccctgccgc 21951756 Query: 286 ctgccagtacct 297 |||||| ||||| Sbjct: 21951757 ctgccaatacct 21951768 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 403 ttgcttactgctctggctcctgttctctggtgatgaacttctt 445 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21951928 ttgcttactgctctggctcctcttctctggtgatgaacttctt 21951970 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 25352406 ctccacctccacctccaccgccaccaccg 25352378
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| ||||| |||||||||||||||||||||| |||||| || || | ||| || Sbjct: 50408 cttgatccagccattagcgaaggcgatggcgaggatgacgaagggcgtcgacatgccaaa 50349 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctccccggcagt 285 ||||| |||||||||||| |||||| |||| |||||||| |||||||||||||| || | Sbjct: 50348 gatgatgatgtagggcagcggcgtcttcatcgggttctcgcccttcctctcccctgccgc 50289 Query: 286 ctgccagtacct 297 |||||| ||||| Sbjct: 50288 ctgccaatacct 50277 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 403 ttgcttactgctctggctcctgttctctggtgatgaacttctt 445 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 50117 ttgcttactgctctggctcctcttctctggtgatgaacttctt 50075
>ref|NM_184955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 735 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| ||||| |||||||||||||||||||||| |||||| || || | ||| || Sbjct: 418 cttgatccagccattagcgaaggcgatggcgaggatgacgaagggcgtcgacatgccaaa 359 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctcccc 279 ||||| |||||||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 358 gatgatgatgtagggcagcggcgtcttcatcgggttctcgcccttcctctcccc 305 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 408 tactgctctggctcctgttctctggtgatgaacttctt 445 |||||||||||||||| ||||||||||||||||||||| Sbjct: 291 tactgctctggctcctcttctctggtgatgaacttctt 254
>dbj|AK065923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048M24, full insert sequence Length = 726 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 166 cttgatccatccattggcgaaggcgatggcgaggatgatgaagggggtggagaagccgaa 225 ||||||||| ||||| |||||||||||||||||||||| |||||| || || | ||| || Sbjct: 409 cttgatccagccattagcgaaggcgatggcgaggatgacgaagggcgtcgacatgccaaa 350 Query: 226 gatgacgatgtagggcagtggcgtcatcatggggttctcccccttcctctcccc 279 ||||| |||||||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 349 gatgatgatgtagggcagcggcgtcttcatcgggttctcgcccttcctctcccc 296 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 408 tactgctctggctcctgttctctggtgatgaacttctt 445 |||||||||||||||| ||||||||||||||||||||| Sbjct: 282 tactgctctggctcctcttctctggtgatgaacttctt 245
>gb|AC113614.4| Homo sapiens BAC clone RP11-559P10 from 4, complete sequence Length = 103585 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 catcatcatcatccccattttat 321 ||||||||||||||||||||||| Sbjct: 76963 catcatcatcatccccattttat 76985
>gb|AC007686.5|AC007686 Homo sapiens chromosome 14 clones CTD-2289B16, RP11-116N21, RP11-7F17, complete sequence Length = 181386 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattttat 321 ||||||||||||||||||||||| Sbjct: 65012 catcatcatcatccccattttat 64990
>gb|AC006390.8|AC006390 Homo sapiens chromosome 4 clone C0106M04 map 4p16, complete sequence Length = 183876 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattttat 321 ||||||||||||||||||||||| Sbjct: 51410 catcatcatcatccccattttat 51388
>gb|AC007073.2|AC007073 Homo sapiens chromosome 4 clone C0310G15 map 4p16, complete sequence Length = 193772 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattttat 321 ||||||||||||||||||||||| Sbjct: 147478 catcatcatcatccccattttat 147456
>dbj|AP002815.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-939C17 Length = 174484 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 catcatcatcatccccattttat 321 ||||||||||||||||||||||| Sbjct: 46764 catcatcatcatccccattttat 46786
>ref|XM_523961.1| PREDICTED: Pan troglodytes similar to cadherin 19, type 2 preproprotein (LOC468572), mRNA Length = 2319 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 1924 gatgatgaagggggtggagaag 1945
>ref|XM_469068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 124 ctccacctccacctccaccgccaccaccg 96
>ref|NM_192530.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 167 ctccacctccacctccaccgccaccaccg 195
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 157073 ctccacctccacctccaccgccaccaccg 157045
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 41611 ctccacctccacctccaccgccaccaccg 41639
>ref|NM_021153.2| Homo sapiens cadherin 19, type 2 (CDH19), mRNA Length = 3185 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 2062 gatgatgaagggggtggagaag 2083
>gb|AY358654.1| Homo sapiens clone DNA53906 CDH19 (UNQ478) mRNA, complete cds Length = 2857 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 1960 gatgatgaagggggtggagaag 1981
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttta 320 |||||||||||||||||||||| Sbjct: 155861 catcatcatcatccccatttta 155840
>emb|AJ007607.1|HSAJ7607 Homo sapiens mRNA for cadherin-19 (CDH19 gene) Length = 2956 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 2062 gatgatgaagggggtggagaag 2083
>gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115000 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccattttat 321 |||||||||||||||||||||| Sbjct: 20926 atcatcatcatccccattttat 20947
>gb|AC090393.9| Homo sapiens chromosome 18, clone RP11-738B2, complete sequence Length = 184486 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 18069 gatgatgaagggggtggagaag 18090
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 22765213 ctccacctccacctccaccgccaccaccg 22765241 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 caccgccaccaccgagctgc 497 |||||||||||||||||||| Sbjct: 16041996 caccgccaccaccgagctgc 16041977
>gb|AF047826.1|AF047826 Homo sapiens cadherin-7 (CDH7) mRNA, partial cds Length = 1445 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gatgatgaagggggtggagaag 220 |||||||||||||||||||||| Sbjct: 559 gatgatgaagggggtggagaag 580
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 82602 ctccacctccacctccaccgccaccaccg 82630
>dbj|AK064970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B11, full insert sequence Length = 3145 Score = 44.1 bits (22), Expect = 0.51 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccaccg 491 ||||| || |||||||||||||||||||| Sbjct: 1014 ctccacctccacctccaccgccaccaccg 1042
>dbj|AP000562.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-40O16, complete sequence Length = 94000 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttta 320 |||||||||||||||||||||| Sbjct: 35515 catcatcatcatccccatttta 35494
>dbj|AP002761.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-800A3, complete sequence Length = 196988 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttta 320 |||||||||||||||||||||| Sbjct: 163694 catcatcatcatccccatttta 163673
>ref|XM_426044.1| PREDICTED: Gallus gallus similar to Cadherin-9 precursor (LOC428487), mRNA Length = 3213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 atgatgaagggggtggagaag 220 ||||||||||||||||||||| Sbjct: 2822 atgatgaagggggtggagaag 2842
>gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-319E8, complete sequence Length = 153773 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 12165 catcatcatcatccccatttt 12185
>gb|AC112257.5| Mus musculus BAC clone RP23-43A18 from 16, complete sequence Length = 199117 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 acatcatcatcatccccattt 318 ||||||||||||||||||||| Sbjct: 85215 acatcatcatcatccccattt 85195
>emb|CR722989.2|CNS0GKSZ Tetraodon nigroviridis full-length cDNA Length = 1595 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gaggatgatgaagggggtgga 216 ||||||||||||||||||||| Sbjct: 259 gaggatgatgaagggggtgga 279
>emb|CR722074.2|CNS0GK3K Tetraodon nigroviridis full-length cDNA Length = 1338 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gaggatgatgaagggggtgga 216 ||||||||||||||||||||| Sbjct: 260 gaggatgatgaagggggtgga 280
>gb|BC075811.1| Homo sapiens coiled-coil domain containing 76, mRNA (cDNA clone MGC:87928 IMAGE:5104751), complete cds Length = 3217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 2742 atcatcatcatccccatttta 2722
>emb|AL445928.8| Human DNA sequence from clone RP11-305E17 on chromosome 1, complete sequence Length = 173580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 44988 atcatcatcatccccatttta 44968
>gb|AC107294.7| Homo sapiens 3 BAC RP11-329B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193421 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 tcatcatcatccccattttat 321 ||||||||||||||||||||| Sbjct: 39944 tcatcatcatccccattttat 39964
>gb|AC114492.6| Homo sapiens chromosome 1 clone RP11-319C21, complete sequence Length = 141677 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 73516 atcatcatcatccccatttta 73536
>emb|AL023798.1|HS220J16 Human DNA sequence from clone RP6-220J16 on chromosome Xq26.1-27.3, complete sequence Length = 108086 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 18824 atcatcatcatccccatttta 18804
>emb|BX032556.1|CNS08XA8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48BH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 858 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 196 gaggatgatgaagggggtggagaagccga 224 ||||||| || |||||||||||||||||| Sbjct: 491 gaggatgttggagggggtggagaagccga 463
>gb|AC123025.5| Homo sapiens 12 BAC RP11-642J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89119 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 5217 atcatcatcatccccatttta 5237
>dbj|AK002081.1| Homo sapiens cDNA FLJ11219 fis, clone PLACE1008122 Length = 3129 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 2732 atcatcatcatccccatttta 2712
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcgcttgcttacgatcagcccggcg 536 ||||| ||||||||||||||||||| Sbjct: 3228894 gcgctggcttacgatcagcccggcg 3228918
>ref|NM_133104.2| Drosophila melanogaster CG7282-RA (CG7282), mRNA Length = 5857 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccacc 490 ||||| || ||||||||||||||||||| Sbjct: 505 ctccacctccacctccaccgccaccacc 478
>gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, complete sequence Length = 207883 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 acatcatcatcatccccattt 318 ||||||||||||||||||||| Sbjct: 7120 acatcatcatcatccccattt 7100
>ref|NM_019083.1| Homo sapiens coiled-coil domain containing 76 (CCDC76), mRNA Length = 3129 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 2732 atcatcatcatccccatttta 2712
>gb|BC057226.1| Homo sapiens coiled-coil domain containing 76, mRNA (cDNA clone IMAGE:4699485) Length = 2645 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttta 320 ||||||||||||||||||||| Sbjct: 2312 atcatcatcatccccatttta 2292
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 cattttatccacacccattggcaat 338 |||||||||||| |||||||||||| Sbjct: 70126 cattttatccactcccattggcaat 70102
>gb|AC018490.6| Drosophila melanogaster, chromosome X, region 17E-17F, BAC clone BACR25O02, complete sequence Length = 165098 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccacc 490 ||||| || ||||||||||||||||||| Sbjct: 57142 ctccacctccacctccaccgccaccacc 57115
>gb|AC010601.6| Homo sapiens chromosome 16 clone CTA-481E9, complete sequence Length = 110222 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 33575 catcatcatcatccccatttt 33555
>gb|AC093099.1| Drosophila melanogaster, chromosome 2L, region 39A-39D, BAC clone BACR34H23, complete sequence Length = 163475 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 tctctgaagaaatgaattaca 57 ||||||||||||||||||||| Sbjct: 15253 tctctgaagaaatgaattaca 15273
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggaggagagctcgatgggtca 139 ||||||||||||||||||||| Sbjct: 26258988 ggaggagagctcgatgggtca 26259008
>gb|AC147283.3| Pan troglodytes BAC clone RP43-94K2 from chromosome 7, complete sequence Length = 171112 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 128195 catcatcatcatccccatttt 128215
>gb|AC083861.2|AC083861 Homo sapiens chromosome 7 clone RP11-164E6, complete sequence Length = 147288 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 15063 catcatcatcatccccatttt 15043
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 34145 catcatcatcatccccatttt 34165
>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163077 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 agggcagtggcgtcatcatgg 257 ||||||||||||||||||||| Sbjct: 29468 agggcagtggcgtcatcatgg 29488
>gb|AC007444.1|AC007444 Homo sapiens clone RP11-340F1 from 7p14-15, complete sequence Length = 156940 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccatttt 319 ||||||||||||||||||||| Sbjct: 120041 catcatcatcatccccatttt 120021
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggaggagagctcgatgggtca 139 ||||||||||||||||||||| Sbjct: 33616 ggaggagagctcgatgggtca 33636
>gb|AC156038.2| Mus musculus BAC clone RP23-250I2 from 16, complete sequence Length = 202844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 acatcatcatcatccccattt 318 ||||||||||||||||||||| Sbjct: 190609 acatcatcatcatccccattt 190589
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggaggagagctcgatgggtca 139 ||||||||||||||||||||| Sbjct: 150846 ggaggagagctcgatgggtca 150866
>gb|AC008001.1|AC008001 Drosophila melanogaster, chromosome 3R, region 83E7-83F2, P1 clones DS04679 and DS07437, complete sequence Length = 130149 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 cattttatccacacccattggcaat 338 |||||||||||| |||||||||||| Sbjct: 24513 cattttatccactcccattggcaat 24537
>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the complete sequence Length = 298020 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 cattttatccacacccattggcaat 338 |||||||||||| |||||||||||| Sbjct: 124270 cattttatccactcccattggcaat 124246
>gb|AE003669.5| Drosophila melanogaster chromosome 2L, section 78 of 83 of the complete sequence Length = 273993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 tctctgaagaaatgaattaca 57 ||||||||||||||||||||| Sbjct: 165591 tctctgaagaaatgaattaca 165611
>gb|AC006574.1|AC006574 Drosophila melanogaster, chromosome 2R, region 39A3-39B1, P1 clones DS02919 and DS05130, complete sequence Length = 127035 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 tctctgaagaaatgaattaca 57 ||||||||||||||||||||| Sbjct: 93098 tctctgaagaaatgaattaca 93118
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete sequence Length = 297236 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 ctccatctncacctccaccgccaccacc 490 ||||| || ||||||||||||||||||| Sbjct: 92369 ctccacctccacctccaccgccaccacc 92342
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 gaagatgacgatgtagggcag 243 ||||||||||||||||||||| Sbjct: 2111164 gaagatgacgatgtagggcag 2111144
>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete sequence Length = 122358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 tcatcatcatccccattttat 321 ||||||||||||||||||||| Sbjct: 110733 tcatcatcatccccattttat 110753
>gb|AC151761.1| Ornithorhynchus anatinus chromosome UNK clone OABb-434P24, complete sequence Length = 134595 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tcatcatcatccccatttta 320 |||||||||||||||||||| Sbjct: 62319 tcatcatcatccccatttta 62338
>ref|XM_636089.1| Dictyostelium discoideum hypothetical protein (DDB0205206), partial mRNA Length = 1326 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 atcatcatcatccccatttt 319 |||||||||||||||||||| Sbjct: 1176 atcatcatcatccccatttt 1157
>ref|NM_194629.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0079B05.10), mRNA Length = 3810 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 1856 cacctccaccgccaccaccg 1875
>ref|NM_196559.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0075H14.15), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 537 cacctccaccgccaccaccg 518
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctcccccttcctctcccc 279 |||||||||||||||||||| Sbjct: 568930 ttctcccccttcctctcccc 568949
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aggcgatggcgaggatgatg 205 |||||||||||||||||||| Sbjct: 623176 aggcgatggcgaggatgatg 623157
>gb|AC116601.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0079B05, complete sequence Length = 159382 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 11193 cacctccaccgccaccaccg 11212
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 ctccaccgccaccaccgagctgcg 498 ||||||| |||||||||||||||| Sbjct: 79836 ctccacctccaccaccgagctgcg 79859
>ref|XM_953092.1| Neurospora crassa OR74A hypothetical protein (NCU07410.1) partial mRNA Length = 2079 Score = 40.1 bits (20), Expect = 8.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccac 489 ||||| || |||||||||||||||||| Sbjct: 1127 ctccacctccacctccaccgccaccac 1153
>ref|XM_954640.1| Neurospora crassa OR74A hypothetical protein (NCU05758.1) partial mRNA Length = 1701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaggggaaggaggagagctc 130 |||||||||||||||||||| Sbjct: 1569 aaggggaaggaggagagctc 1588
>ref|XM_325612.1| Neurospora crassa OR74A hypothetical protein (NCU05758.1) partial mRNA Length = 1701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaggggaaggaggagagctc 130 |||||||||||||||||||| Sbjct: 1569 aaggggaaggaggagagctc 1588
>ref|XM_327695.1| Neurospora crassa OR74A hypothetical protein (NCU07410.1) partial mRNA Length = 2079 Score = 40.1 bits (20), Expect = 8.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 463 ctccatctncacctccaccgccaccac 489 ||||| || |||||||||||||||||| Sbjct: 1127 ctccacctccacctccaccgccaccac 1153
>gb|DQ011157.1| Monkeypox virus strain USA_2003_039, complete genome Length = 198780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttt 319 |||||||||||||||||||| Sbjct: 27290 atcatcatcatccccatttt 27309
>gb|DQ011153.1| Monkeypox virus strain USA_2003_044, complete genome Length = 198780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttt 319 |||||||||||||||||||| Sbjct: 27290 atcatcatcatccccatttt 27309
>gb|AY753185.1| Monkeypox virus strain COP-58, complete genome Length = 199469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttt 319 |||||||||||||||||||| Sbjct: 27535 atcatcatcatccccatttt 27554
>gb|AY603973.1| Monkeypox virus strain MPXV-WRAIR7-61, complete genome Length = 199195 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 atcatcatcatccccatttt 319 |||||||||||||||||||| Sbjct: 27292 atcatcatcatccccatttt 27311
>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence Length = 171127 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tcatcatcatccccatttta 320 |||||||||||||||||||| Sbjct: 141099 tcatcatcatccccatttta 141118
>ref|XM_744458.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g04190) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 tctggagcgcttgcttacga 525 |||||||||||||||||||| Sbjct: 714 tctggagcgcttgcttacga 733
>ref|XM_569493.1| Cryptococcus neoformans var. neoformans JEC21 GTP binding protein (CNC02190) partial mRNA Length = 3480 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aggcgatggcgaggatgatg 205 |||||||||||||||||||| Sbjct: 1962 aggcgatggcgaggatgatg 1981
>ref|XM_571685.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF01930) partial mRNA Length = 2883 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctcccccttcctctcccc 279 |||||||||||||||||||| Sbjct: 48 ttctcccccttcctctcccc 67
>gb|AC131716.2| Mus musculus BAC clone RP23-183O3 from 5, complete sequence Length = 223812 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tccctatataaagatctctg 42 |||||||||||||||||||| Sbjct: 53675 tccctatataaagatctctg 53694
>gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, complete sequence Length = 191490 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ctgctctggctcctgttctc 429 |||||||||||||||||||| Sbjct: 72848 ctgctctggctcctgttctc 72867
>gb|AY894198.1| Tringa melanoleuca oocyte maturation factor Mos (c-mos) gene, partial cds Length = 472 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggcgaggatgatgaaggggg 212 |||||||||||||||||||| Sbjct: 250 ggcgaggatgatgaaggggg 269
>emb|AL392111.12| Human DNA sequence from clone RP11-487I5 on chromosome 10 Contains the DUSP13 gene for dual specificity phosphatase 13 (BEDP, TMDP, FLJ32450), the gene for a novel protein (FLJ25082), the 5' end fo the VDAC2 gene for voltage-dependent anion channel 2, a peptidylprolyl isomerase A (cyclophilin A)(PPIA)(CYPA, CYPH) pseudogene, a ribosomal protein S26 (RPS26) pseudogene and two CpG islands, complete sequence Length = 159365 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 caccgccaccaccgagctgcgccg 501 ||||||||||||| |||||||||| Sbjct: 16054 caccgccaccaccaagctgcgccg 16031
>emb|AL360011.19| Human DNA sequence from clone RP11-103A2 on chromosome 10 Contains the HTR7 gene for 5-hydroxytryptamine receptor 7 (adenylate cyclase-coupled) and a CpG island, complete sequence Length = 157636 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattt 318 |||||||||||||||||||| Sbjct: 68402 catcatcatcatccccattt 68383
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 1212481 cacctccaccgccaccaccg 1212500
>emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercontig; segment 1/3 Length = 345637 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 acatcatcatcatccccatt 317 |||||||||||||||||||| Sbjct: 189910 acatcatcatcatccccatt 189929
>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence Length = 203937 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ttctcccccttcctctcccc 279 |||||||||||||||||||| Sbjct: 143729 ttctcccccttcctctcccc 143710
>gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, complete sequence Length = 202804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 acagtaatctctatagaatg 86 |||||||||||||||||||| Sbjct: 41376 acagtaatctctatagaatg 41395
>gb|AC008637.7| Homo sapiens chromosome 5 clone CTB-178M22, complete sequence Length = 100547 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 acatcatcatcatccccattttat 321 |||||||||||||| ||||||||| Sbjct: 51462 acatcatcatcatctccattttat 51439
>gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 362 of 460 of the complete genome Length = 11605 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccgagct 495 ||||||||||||||||||| |||| Sbjct: 7189 cacctccaccgccaccaccaagct 7212
>gb|AC099789.2| Homo sapiens chromosome 1 clone RP11-377K22, complete sequence Length = 174162 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 atcatcatccccattttatc 322 |||||||||||||||||||| Sbjct: 11218 atcatcatccccattttatc 11237
>gb|AC099562.2| Homo sapiens chromosome 1 clone RP11-213P13, complete sequence Length = 168767 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 atcatcatccccattttatc 322 |||||||||||||||||||| Sbjct: 146740 atcatcatccccattttatc 146759
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 gatggcgaggatgatgaagggggt 213 ||||||||||| |||||||||||| Sbjct: 1198079 gatggcgaggaagatgaagggggt 1198102
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aaggcgatggcgaggatgat 204 |||||||||||||||||||| Sbjct: 3318963 aaggcgatggcgaggatgat 3318982
>gb|AC079844.3| Homo sapiens chromosome 10 clone RP11-364F09, complete sequence Length = 201699 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattt 318 |||||||||||||||||||| Sbjct: 188070 catcatcatcatccccattt 188051
>gb|AC104037.3| Homo sapiens chromosome 8, clone RP11-692P18, complete sequence Length = 152267 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 catcatcatccccattttat 321 |||||||||||||||||||| Sbjct: 79276 catcatcatccccattttat 79257
>gb|AC093842.3| Homo sapiens BAC clone RP11-443J23 from 4, complete sequence Length = 113025 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggaaggggaaggaggagagc 128 |||||||||||||||||||| Sbjct: 93617 ggaaggggaaggaggagagc 93636
>gb|AC104005.3| Homo sapiens chromosome 8, clone RP11-158M23, complete sequence Length = 185231 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 catcatcatccccattttat 321 |||||||||||||||||||| Sbjct: 173117 catcatcatccccattttat 173136
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 96719 cacctccaccgccaccaccg 96738
>gb|AF350499.1|AF350499 Mus musculus H+,K+-ATPase alpha 2 subunit (Hkalpha2) gene, complete cds Length = 34603 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 acagtaatctctatagaatg 86 |||||||||||||||||||| Sbjct: 5295 acagtaatctctatagaatg 5314
>gb|AC008958.7| Homo sapiens chromosome 5 clone CTD-2353N24, complete sequence Length = 109526 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ttctcccccttcctctcccc 279 |||||||||||||||||||| Sbjct: 61011 ttctcccccttcctctcccc 60992
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccgagct 495 ||||||||||||||||||| |||| Sbjct: 964761 cacctccaccgccaccaccaagct 964738
>emb|AL111887.1|CNS019O7 Botrytis cinerea strain T4 cDNA library Length = 696 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggaaggggaaggaggagagc 128 |||||||||||||||||||| Sbjct: 667 ggaaggggaaggaggagagc 648
>ref|XM_624906.1| PREDICTED: Apis mellifera similar to ENSANGP00000028515 (LOC552530), partial mRNA Length = 1407 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 634 cacctccaccgccaccaccg 615
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 ctccaccgccaccaccgagctgcg 498 ||||||| |||||||||||||||| Sbjct: 26669691 ctccacctccaccaccgagctgcg 26669714
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 14501893 cacctccaccgccaccaccg 14501874 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 1212481 cacctccaccgccaccaccg 1212500
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggcgaaggcgatggcgagga 200 |||||||||||||||||||| Sbjct: 24098898 ggcgaaggcgatggcgagga 24098917
>gb|AC025906.2|AC025906 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0075H14, complete sequence Length = 155420 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 116256 cacctccaccgccaccaccg 116237
>gb|AC008311.3|AC008311 Drosophila melanogaster, chromosome 3R, region 83B-83C, BAC clone BACR02L23, complete sequence Length = 161117 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattt 318 |||||||||||||||||||| Sbjct: 89981 catcatcatcatccccattt 89962
>gb|AC093698.5| Homo sapiens BAC clone RP11-806A20 from 2, complete sequence Length = 136220 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tcatcatcatccccatttta 320 |||||||||||||||||||| Sbjct: 27645 tcatcatcatccccatttta 27626
>gb|AC079631.16| Homo sapiens 12 BAC RP11-389G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154907 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 catcatcatccccattttat 321 |||||||||||||||||||| Sbjct: 76240 catcatcatccccattttat 76221
>gb|AF222060.1| Halovirus HF2, complete genome Length = 77670 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 50310 cacctccaccgccaccaccg 50329
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 gctgcgccgagattctggagcgct 516 |||||||||| ||||||||||||| Sbjct: 2871562 gctgcgccgacattctggagcgct 2871585
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 caccgccaccaccgagctgc 497 |||||||||||||||||||| Sbjct: 133581 caccgccaccaccgagctgc 133562
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggcgaaggcgatggcgagga 200 |||||||||||||||||||| Sbjct: 32356 ggcgaaggcgatggcgagga 32375
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggcgaaggcgatggcgagga 200 |||||||||||||||||||| Sbjct: 108591 ggcgaaggcgatggcgagga 108610
>dbj|AB026636.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14A17 Length = 92620 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 70058 cacctccaccgccaccaccg 70039
>emb|AJ429230.1|VCA429230 Volvox carteri f. nagariensis mRNA for pherophorin-dz1 protein Length = 3030 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 767 cacctccaccgccaccaccg 786
>ref|XM_312813.2| Anopheles gambiae str. PEST ENSANGP00000003200 (ENSANGG00000002587), partial mRNA Length = 4068 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 2787 cacctccaccgccaccaccg 2806
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gccaccaccgagctgcgccg 501 |||||||||||||||||||| Sbjct: 15414 gccaccaccgagctgcgccg 15395
>gb|AY106069.1| Zea mays PCO155833 mRNA sequence Length = 603 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 303 cacctccaccgccaccaccg 284
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gccaccaccgagctgcgccg 501 |||||||||||||||||||| Sbjct: 15414 gccaccaccgagctgcgccg 15395
>emb|AJ313529.1|NCR313529 Neurospora crassa pre2 gene for pheromone receptor, exon 1 Length = 3000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaggggaaggaggagagctc 130 |||||||||||||||||||| Sbjct: 2347 aaggggaaggaggagagctc 2366
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete sequence Length = 305165 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 catcatcatcatccccattt 318 |||||||||||||||||||| Sbjct: 36990 catcatcatcatccccattt 36971
>gb|AC076974.33| Mus musculus strain C57BL/6J chromosome 8 clone rp23-267j18, complete sequence Length = 211075 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ctgctctggctcctgttctc 429 |||||||||||||||||||| Sbjct: 190517 ctgctctggctcctgttctc 190536
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 14510135 cacctccaccgccaccaccg 14510116 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cacctccaccgccaccaccg 491 |||||||||||||||||||| Sbjct: 1212478 cacctccaccgccaccaccg 1212497
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 ctccaccgccaccaccgagctgcg 498 ||||||| |||||||||||||||| Sbjct: 26994823 ctccacctccaccaccgagctgcg 26994846
>gb|AC142106.4| Mus musculus BAC clone RP24-180L10 from 1, complete sequence Length = 194634 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttctcccccttcctctcccc 279 |||||||||||||||||||| Sbjct: 86111 ttctcccccttcctctcccc 86130
>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete sequence Length = 186276 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ctcccccttcctctccccgg 281 |||||||||||||||||||| Sbjct: 17678 ctcccccttcctctccccgg 17697 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,247,051 Number of Sequences: 3902068 Number of extensions: 5247051 Number of successful extensions: 134293 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132648 Number of HSP's gapped (non-prelim): 1645 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
