>RL71_ARATH (P60040) 60S ribosomal protein L7-1|
          Length = 242

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEILTVGPHFKEA NF               KRNHYVEGGDAGNREN+IN+L+RRMN
Sbjct: 185 IHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242

>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFKEA NF               KRNHYVEGGDAGNREN+IN+LVRRMN
Sbjct: 185 IHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3|
          Length = 244

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFKEA NF               KRNHYVEGGDAGNREN+IN+LVRRMN
Sbjct: 187 IHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

>RL7_RAT (P05426) 60S ribosomal protein L7|
          Length = 260

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVG  FKEA NF               K  H+VEGGDAGNRE+ IN+L+RRMN
Sbjct: 203 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260

>RL7_HUMAN (P18124) 60S ribosomal protein L7|
          Length = 248

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVG  FKEA NF               K  H+VEGGDAGNRE+ IN+L+RRMN
Sbjct: 191 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7|
          Length = 248

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVG  FKEA NF               K  H+VEGGDAGNRE+ IN+L+RRMN
Sbjct: 191 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248

>RL7_MOUSE (P14148) 60S ribosomal protein L7|
          Length = 270

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 31/58 (53%), Positives = 36/58 (62%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVG  FKEA NF               K  H+VEGGDAGNRE+ IN+L+RRMN
Sbjct: 213 IHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

>RL7_CAEEL (O01802) 60S ribosomal protein L7|
          Length = 244

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 31/56 (55%), Positives = 35/56 (62%)
 Frame = -2

Query: 263 HEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 96
           HEI TVGPHFKEA NF               K NH+VEGGD GNRE+ IN L+R+M
Sbjct: 188 HEIATVGPHFKEATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243

>RL7_DROME (P32100) 60S ribosomal protein L7|
          Length = 252

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 35/57 (61%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRM 96
           VHEI TVGP+FK A NF               K NHYV GGD GNRE+ IN+L+R+M
Sbjct: 195 VHEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251

>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7|
          Length = 248

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVGP+FK+A NF               ++  H++EGGD GNRE +IN L+R+MN
Sbjct: 190 IHEIYTVGPNFKQASNFLWPFKLSNPTGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248

>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)|
          Length = 243

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFK+A NF                R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243

>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)|
          Length = 243

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFK+A NF                R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243

>RL7_ASHGO (Q755A7) 60S ribosomal protein L7|
          Length = 243

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKR--NHYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFK+A NF                R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 184 IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243

>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7|
          Length = 244

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 93
           +HEI+TVGPHFK+A NF                R   H+++GG  GNRE +IN+LV+ MN
Sbjct: 185 IHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244

>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7|
          Length = 241

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRN-HYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVGP+FK+A NF               ++  H+++GGD GNRE +IN LV++MN
Sbjct: 183 IHEIYTVGPNFKQANNFLWPFKLSNPNGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241

>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C|
          Length = 251

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 96
           +HEI TVGP+FK+A NF               ++  H++EGGDAG R+ +IN LVR+M
Sbjct: 193 IHEIYTVGPNFKQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250

>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B|
          Length = 250

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRRM 96
           +HEI TVGP+FK+A NF               ++  H++EGGDAG R+ +IN LV++M
Sbjct: 192 IHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249

>RL7_YARLI (Q6C603) 60S ribosomal protein L7|
          Length = 250

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRN--HYVEGGDAGNRENYINQLVRRMN 93
           +HEI TVGP FK+A NF               +R   HY+EGG  GNRE  IN L++  N
Sbjct: 191 IHEIYTVGPAFKQASNFLWPFKLSNPSGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250

>RL7_DICDI (P11874) 60S ribosomal protein L7|
          Length = 245

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 24/58 (41%), Positives = 32/58 (55%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI T G HFK+  N                K+  +++GGDAGNRE+ IN L+ RMN
Sbjct: 188 IHEITTCGKHFKQVNNSLWPFKLNCPRGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245

>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A|
          Length = 249

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKR-NHYVEGGDAGNRENYINQLVRR 99
           +HEI  VG HFKE   F               K+  H+ EG  AG     IN+L+++
Sbjct: 191 IHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247

>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1|
          Length = 246

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI   G HF+E   F               +     E G  G R   INQL+R++N
Sbjct: 189 IHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246

>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1|
          Length = 246

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -2

Query: 266 VHEILTVGPHFKEAKNFXXXXXXXXXXXXXXXKRNHYVEGGDAGNRENYINQLVRRMN 93
           +HEI   G HF+E   F               +     E G  G R   INQL+R++N
Sbjct: 189 IHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246

>PDXA2_PSEAE (Q9I1Q5) 4-hydroxythreonine-4-phosphate dehydrogenase 2 (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase
           2)
          Length = 337

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 249 RWPTLQGGXKLPVAXPXEGTA 187
           R  T+QGG  +P+A P  GTA
Sbjct: 288 RGVTVQGGLPIPIATPAHGTA 308


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,074,054
Number of Sequences: 219361
Number of extensions: 364154
Number of successful extensions: 534
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)