| Clone Name | rbags36i22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 Score = 289 bits (146), Expect = 2e-75 Identities = 176/187 (94%) Strand = Plus / Minus Query: 82 cattcaacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcg 141 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 787 cattcaacctagttcatccttctaacaagctggttgatgtagttctcacggttcccagcg 728 Query: 142 tcaccaccctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagn 201 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 727 tcaccaccctcgacgtagtggttcctcttcttcttcaggccaccgagcggagccttgagc 668 Query: 202 tggantggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcg 261 | || ||||||||||||||| || |||||||| ||||||||||| ||||||||||||||| Sbjct: 667 ttgaatggccacaggaagttgttcgcctccttaaagtgtgggccgacggtcaagatctcg 608 Query: 262 tgcacaa 268 ||||||| Sbjct: 607 tgcacaa 601
>ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 202 bits (102), Expect = 4e-49 Identities = 153/171 (89%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 753 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 694 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 693 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 634 Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| |||||||| || ||||||||||| ||||||||||| |||| |||||| Sbjct: 633 ccagaggaagttgttggcctccttgaaatgtgggccaacagtcatgatctc 583
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 202 bits (102), Expect = 4e-49 Identities = 153/171 (89%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111788 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 111729 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 111728 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 111669 Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| |||||||| || ||||||||||| ||||||||||| |||| |||||| Sbjct: 111668 ccagaggaagttgttggcctccttgaaatgtgggccaacagtcatgatctc 111618
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 202 bits (102), Expect = 4e-49 Identities = 153/171 (89%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 39811 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 39752 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 39751 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 39692 Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| |||||||| || ||||||||||| ||||||||||| |||| |||||| Sbjct: 39691 ccagaggaagttgttggcctccttgaaatgtgggccaacagtcatgatctc 39641
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 202 bits (102), Expect = 4e-49 Identities = 153/171 (89%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 30636080 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 30636021 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 30636020 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 30635961 Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| |||||||| || ||||||||||| ||||||||||| |||| |||||| Sbjct: 30635960 ccagaggaagttgttggcctccttgaaatgtgggccaacagtcatgatctc 30635910
>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full insert sequence Length = 1040 Score = 202 bits (102), Expect = 4e-49 Identities = 153/171 (89%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 850 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 791 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 790 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 731 Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| |||||||| || ||||||||||| ||||||||||| |||| |||||| Sbjct: 730 ccagaggaagttgttggcctccttgaaatgtgggccaacagtcatgatctc 680
>ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1084 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||| ||||||||| || || ||||||| Sbjct: 794 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 735 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 ||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || | Sbjct: 734 cctcgacatagtggttcctcttcttcttgaggccaccgagtggtgccttcaacttgaagg 675 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 ||||||||||||| || ||||||||||||||||| || || |||| ||||||||| |||| Sbjct: 674 gccacaggaagttgttggcctccttgaagtgtggaccgacagtcatgatctcgtggacaa 615
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||| ||||||||| || || ||||||| Sbjct: 8149182 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 8149123 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 ||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || | Sbjct: 8149122 cctcgacatagtggttcctcttcttcttgaggccaccgagtggtgccttcaacttgaagg 8149063 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 ||||||||||||| || ||||||||||||||||| || || |||| ||||||||| |||| Sbjct: 8149062 gccacaggaagttgttggcctccttgaagtgtggaccgacagtcatgatctcgtggacaa 8149003
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||| ||||||||| || || ||||||| Sbjct: 117493 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 117434 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 ||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || | Sbjct: 117433 cctcgacatagtggttcctcttcttcttgaggccaccgagtggtgccttcaacttgaagg 117374 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 ||||||||||||| || ||||||||||||||||| || || |||| ||||||||| |||| Sbjct: 117373 gccacaggaagttgttggcctccttgaagtgtggaccgacagtcatgatctcgtggacaa 117314
>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full insert sequence Length = 1084 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||| ||||||||| || || ||||||| Sbjct: 794 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 735 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 ||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || | Sbjct: 734 cctcgacatagtggttcctcttcttcttgaggccaccgagtggtgccttcaacttgaagg 675 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 ||||||||||||| || ||||||||||||||||| || || |||| ||||||||| |||| Sbjct: 674 gccacaggaagttgttggcctccttgaagtgtggaccgacagtcatgatctcgtggacaa 615
>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full insert sequence Length = 594 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||| ||||||||| || || ||||||| Sbjct: 355 cctagttcatcctccggatgagctcgttgatgtagtcctcacggttgccggcatcaccac 296 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 ||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || | Sbjct: 295 cctcgacatagtggttcctcttcttcttgaggccaccgagtggtgccttcaacttgaagg 236 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 ||||||||||||| || ||||||||||||||||| || || |||| ||||||||| |||| Sbjct: 235 gccacaggaagttgttggcctccttgaagtgtggaccgacagtcatgatctcgtggacaa 176
>gb|AY103677.1| Zea mays PCO099976 mRNA sequence Length = 1103 Score = 172 bits (87), Expect = 4e-40 Identities = 156/180 (86%) Strand = Plus / Minus Query: 89 cctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccac 148 ||||||||||||| | | ||||| ||||||||||||||||||||| || |||||||| | Sbjct: 849 cctagttcatcctcttgatgagctcgttgatgtagttctcacggtttccggcgtcaccgc 790 Query: 149 cctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantg 208 |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||| | || | Sbjct: 789 cctccacgtagtggttcctcttcttcttgaggccgccgaggggtgccttcagcttgaacg 730 Query: 209 gccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcacaa 268 |||| |||||||| || |||||||||||||| ||||| || |||| ||||||||| |||| Sbjct: 729 gccagaggaagttgttggcctccttgaagtgcgggccgaccgtcatgatctcgtggacaa 670
>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence Length = 1198 Score = 168 bits (85), Expect = 6e-39 Identities = 157/182 (86%) Strand = Plus / Minus Query: 87 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 146 |||||| ||||||||| | | ||||| ||||||||| |||||||||||||| || ||||| Sbjct: 785 aacctaattcatccttttgatgagctcgttgatgtaattctcacggttaccggcatcacc 726 Query: 147 accctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggan 206 |||||| || ||||||||||||||||||||||| || || ||||| |||||||| | | Sbjct: 725 accctccacatagtggttcctcttcttcttcagacctcccagcggggccttcagcttaaa 666 Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcac 266 ||||| |||||||| || ||||||||||||||||||||||| |||| ||||||||| || Sbjct: 665 aggccaaaggaagttgttcgcctccttgaagtgtgggccaacagtcatgatctcgtgaac 606 Query: 267 aa 268 || Sbjct: 605 aa 604
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 168 bits (85), Expect = 6e-39 Identities = 157/182 (86%) Strand = Plus / Plus Query: 87 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 146 |||||| ||||||||| | | ||||| |||||||||||||| |||||||| || ||||| Sbjct: 453 aacctaattcatccttttgatgagctcattgatgtagttctcgcggttaccggcatcacc 512 Query: 147 accctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggan 206 ||||| || |||||||||||||||||||||||||| || ||||| ||||||| | || Sbjct: 513 gccctccacatagtggttcctcttcttcttcaggcctcccagcggcgccttcaacttgaa 572 Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcac 266 |||||| |||||||| || ||||||||||||||||||||||| |||| ||||||||| || Sbjct: 573 tggccagaggaagttgttggcctccttgaagtgtgggccaacagtcatgatctcgtgaac 632 Query: 267 aa 268 || Sbjct: 633 aa 634
>gb|AY104655.1| Zea mays PCO101521 mRNA sequence Length = 1155 Score = 168 bits (85), Expect = 6e-39 Identities = 151/174 (86%) Strand = Plus / Minus Query: 87 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 146 |||||| ||||||||| | | ||||| ||||||||| |||||||||||||| || ||||| Sbjct: 798 aacctaattcatccttttgatgagctcgttgatgtaattctcacggttaccggcatcacc 739 Query: 147 accctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggan 206 |||||| || ||||||||||||||||||||||| || || |||||||||||||| | | Sbjct: 738 accctccacatagtggttcctcttcttcttcagacctcccagcggtgccttcagcttaaa 679 Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 |||||| |||||||| || |||||||||||||||||||| || |||| |||||| Sbjct: 678 tggccaaaggaagttgttcgcctccttgaagtgtgggccgacagtcatgatctc 625
>dbj|D29720.1|RICYK33 Oryza sativa mRNA, partial homologous to ribosomal protein L7 gene Length = 297 Score = 163 bits (82), Expect = 4e-37 Identities = 119/132 (90%) Strand = Plus / Minus Query: 90 ctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccacc 149 ||||||||||||||| | ||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 139 ctagttcatccttctgatgagttcgttgatgtagttctcacggttaccagcatcaccacc 80 Query: 150 ctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantgg 209 ||| |||||||||||||||||||||||||| ||||| || ||||||||||| | || ||| Sbjct: 79 ctcaacgtagtggttcctcttcttcttcagcccacccagtggtgccttcagcttgaatgg 20 Query: 210 ccacaggaagtt 221 ||| |||||||| Sbjct: 19 ccagaggaagtt 8
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 161 bits (81), Expect = 1e-36 Identities = 156/182 (85%) Strand = Plus / Minus Query: 87 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 146 |||||| ||||||||| | | ||||| |||||||||||||| |||||||| || || || Sbjct: 733 aacctaattcatccttttgatgagctcattgatgtagttctcgcggttaccggcatcgcc 674 Query: 147 accctcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggan 206 ||||| || |||||||||||||||||||||||||| || ||||| ||||||| | || Sbjct: 673 gccctccacatagtggttcctcttcttcttcaggcctcccagcggcgccttcaacttgaa 614 Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtgcac 266 |||||| |||||||| || ||||||||||||||||||||||| |||| ||||||||| || Sbjct: 613 tggccagaggaagttgttggcctccttgaagtgtgggccaacagtcatgatctcgtgaac 554 Query: 267 aa 268 || Sbjct: 553 aa 552
>ref|NM_180079.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.1 mRNA, complete cds Length = 981 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 789 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 730 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 729 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 670 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 669 tccttgaagtgaggtccaacagtcatgatctcgtg 635
>ref|NM_180080.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.2 mRNA, complete cds Length = 1220 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 1016 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 957 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 956 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 897 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 896 tccttgaagtgaggtccaacagtcatgatctcgtg 862
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Plus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 79513 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 79572 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 79573 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 79632 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 79633 tccttgaagtgaggtccaacagtcatgatctcgtg 79667
>gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 782 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 710 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 651 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 650 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 591 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 590 tccttgaagtgaggtccaacagtcatgatctcgtg 556
>gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6E13.25; At2g44120) mRNA, complete cds Length = 888 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 752 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 693 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 692 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 633 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 632 tccttgaagtgaggtccaacagtcatgatctcgtg 598
>gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 729 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 710 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 651 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 650 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 591 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 590 tccttgaagtgaggtccaacagtcatgatctcgtg 556
>gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 905 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 752 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 693 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 692 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 633 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 632 tccttgaagtgaggtccaacagtcatgatctcgtg 598
>gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete sequence Length = 1221 Score = 147 bits (74), Expect = 2e-32 Identities = 134/155 (86%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||||||| ||| Sbjct: 1016 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagtggtttctc 957 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 956 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 897 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 896 tccttgaagtgaggtccaacagtcatgatctcgtg 862
>gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 955 Score = 139 bits (70), Expect = 5e-30 Identities = 133/155 (85%) Strand = Plus / Minus Query: 109 agctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctc 168 |||| ||||||| | ||||| | ||| ||||| |||||||| |||||||||| ||| ||| Sbjct: 785 agctcgttgatgaaattctccctgtttccagcatcaccaccttcgacgtagttgtttctc 726 Query: 169 ttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcc 228 |||||||| ||||||||||| |||||||||| |||| ||||||||||||||| || || Sbjct: 725 ttcttcttaaggccaccgagtggtgccttcaattggaatggccacaggaagttgttggct 666 Query: 229 tccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||||||||| || ||||| |||| ||||||||| Sbjct: 665 tccttgaagtgaggtccaacagtcatgatctcgtg 631
>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G01250 mRNA, complete cds Length = 1051 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 780 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 721 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 720 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 661 Query: 235 aa 236 || Sbjct: 660 aa 659
>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 760 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 704 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 645 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 644 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 585 Query: 235 aa 236 || Sbjct: 584 aa 583
>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 960 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 753 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 694 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 693 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 634 Query: 235 aa 236 || Sbjct: 633 aa 632
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Plus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 42564 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 42623 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 42624 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 42683 Query: 235 aa 236 || Sbjct: 42684 aa 42685
>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 751 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 704 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 645 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 644 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 585 Query: 235 aa 236 || Sbjct: 584 aa 583
>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13) mRNA, complete cds Length = 915 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 751 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 692 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 691 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 632 Query: 235 aa 236 || Sbjct: 631 aa 630
>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 889 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 739 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 680 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 679 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 620 Query: 235 aa 236 || Sbjct: 619 aa 618
>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence Length = 996 Score = 105 bits (53), Expect = 7e-20 Identities = 104/122 (85%) Strand = Plus / Minus Query: 115 ttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttcttc 174 |||||| ||||||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct: 780 ttgatgaagttctcacggtttccggcatcaccaccttccacgtagtgatttctcttcttc 721 Query: 175 ttcaggccaccgagcggtgccttcagntggantggccacaggaagtttttngcctccttg 234 || |||||||| || |||||||| || |||| |||||| |||||||| || || |||||| Sbjct: 720 ttgaggccacctagtggtgccttaagctggaatggccaaaggaagttgttggcttccttg 661 Query: 235 aa 236 || Sbjct: 660 aa 659
>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.3 mRNA, complete cds Length = 1569 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 1371 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 1312 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 1311 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 1252 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 1251 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 1203
>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.2 mRNA, complete cds Length = 1225 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 1027 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 968 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 967 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 908 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 907 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 859
>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.1 mRNA, complete cds Length = 995 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 737 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 678 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 677 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 629
>gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 915 Score = 95.6 bits (48), Expect = 7e-17 Identities = 141/173 (81%) Strand = Plus / Minus Query: 91 tagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccc 150 ||||||||||| || | ||||| |||||| | ||||| || || ||||| |||||||| Sbjct: 774 tagttcatcctcctgatgagctcattgatgaaattctcgcgatttccagcatcaccacct 715 Query: 151 tcgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggc 210 || || |||||||| |||||||| || || ||||| || |||||||| || |||| ||| Sbjct: 714 tcaacatagtggtttctcttcttttttagtccaccaagaggtgccttgagttggaaaggc 655 Query: 211 cacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 || |||||||| || ||||||||||||||||| || || || | ||||||||| Sbjct: 654 cataggaagttgttagcctccttgaagtgtggtcccacagtgatgatctcgtg 602
>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 735 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 733 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 674 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 673 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 614 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 613 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 565
>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 971 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 737 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 678 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 677 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 629
>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 966 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 797 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 738 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 737 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 678 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 677 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 629
>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 779 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 720 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 719 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 660 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 659 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 611
>emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1504 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 1371 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 1312 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 1311 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 1252 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 1251 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 1203
>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 1023 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 964 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 963 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 904 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 903 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 855
>dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K20M4 Length = 25790 Score = 95.6 bits (48), Expect = 7e-17 Identities = 138/169 (81%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 5750 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 5691 Query: 152 cgacgtagtggttcctcttcttcttcaggccaccgagcggtgccttcagntggantggcc 211 | ||||| ||||||||||||||||||| || || | || ||||||| |||| ||||| Sbjct: 5690 ccacgtaatggttcctcttcttcttcatccctcccaatggagccttcaactggaatggcc 5631 Query: 212 acaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctc 260 ||| ||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct: 5630 acaaaaagttattggcttccttgaaatgtggcccaaccgtcatgatctc 5582
>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete sequence Length = 105682 Score = 77.8 bits (39), Expect = 2e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 87 aacctagttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcacc 146 |||||| ||||||||||||| ||| | |||||||||| ||| | ||||||||| ||||| Sbjct: 3617 aacctaattcatccttctaatgagttcattgatgtagtcctccctgttaccagcatcacc 3558 Query: 147 accctcgacgtagtggttcctcttcttcttcaggccacc 185 ||| || || ||||| || ||||||||||||| |||||| Sbjct: 3557 accttcaacatagtgatttctcttcttcttcatgccacc 3519
>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 77.8 bits (39), Expect = 2e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 92 agttcatccttctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccct 151 ||||||| || |||||||||| ||||||| ||||||| ||||| ||||| || || || | Sbjct: 765 agttcattctcctaacgagctcgttgatgaagttctcgcggtttccagcatctcctcctt 706 Query: 152 cgacgtagtggttcctcttcttcttca 178 | ||||| ||||||||||||||||||| Sbjct: 705 ccacgtaatggttcctcttcttcttca 679
>emb|BX825608.1|CNS0A7J7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL48ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 350 Score = 65.9 bits (33), Expect = 6e-08 Identities = 126/158 (79%) Strand = Plus / Minus Query: 103 ctaacgagctggttgatgtagttctcacggttaccagcgtcaccaccctcgacgtagtgg 162 |||||||||| ||||||| |||| || ||||| ||||| || || || || ||||| ||| Sbjct: 170 ctaacgagctcgttgatgaagttgtcgcggtttccagcatctcctccttccacgtaatgg 111 Query: 163 ttcctcttcttcttcaggccaccgagcggtgccttcagntggantggccacaggaagttt 222 |||||||||||||||| || || | || |||||| |||| |||||||| ||||| Sbjct: 110 ttcctcttcttcttcatccctcccaatggagccttctactggaatggccacaaaaagtta 51 Query: 223 ttngcctccttgaagtgtgggccaacggtcaagatctc 260 || || |||||||| |||| ||||| |||| |||||| Sbjct: 50 ttggcttccttgaaaagtggcccaaccgtcatgatctc 13
>emb|AJ245656.1|CPA245656 Cyanophora paradoxa partial mRNA for 60S ribosomal protein L7 Length = 447 Score = 58.0 bits (29), Expect = 1e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 |||||||||||||| || |||||||||||||| ||||| || || |||||||||| Sbjct: 329 ggccacaggaagttgttcgcctccttgaagtgggggccgacagtgtagatctcgtg 274
>ref|XM_741482.1| Aspergillus fumigatus Af293 60S ribosomal protein L7 (Afu4g03880) partial mRNA Length = 894 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 126 ctcacggttaccagcgtcaccaccctcgacgtagtg 161 |||||||||||||| |||||||||||||| |||||| Sbjct: 858 ctcacggttaccagtgtcaccaccctcgatgtagtg 823
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 52.0 bits (26), Expect = 0.001 Identities = 49/57 (85%) Strand = Plus / Minus Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 |||||||| |||||| || |||| ||||||||||||||| || || | ||||||||| Sbjct: 285764 tggccacaagaagttgttggcctgcttgaagtgtgggccgacagtgatgatctcgtg 285708
>ref|NM_210820.1| Eremothecium gossypii AFL082Wp (AFL082W), mRNA Length = 732 Score = 52.0 bits (26), Expect = 0.001 Identities = 49/57 (85%) Strand = Plus / Minus Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 |||||||| |||||| || |||| ||||||||||||||| || || | ||||||||| Sbjct: 609 tggccacaagaagttgttggcctgcttgaagtgtgggccgacagtgatgatctcgtg 553
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 50.1 bits (25), Expect = 0.004 Identities = 48/56 (85%) Strand = Plus / Plus Query: 208 ggccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 ||||| |||||||| || |||| |||||||| ||||||||||| |||||||||| Sbjct: 862574 ggccagaggaagttgttggcctgcttgaagttggggccaacggtgtagatctcgtg 862629
>gb|AY440507.1| Armigeres subalbatus ASAP ID: 40391 cytosolic large ribosomal subunit L7 mRNA sequence Length = 632 Score = 48.1 bits (24), Expect = 0.014 Identities = 43/50 (86%) Strand = Plus / Minus Query: 124 ttctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 173 ||||| |||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 489 ttctcgcggttaccraagtcaccaccctcgacgtaatggttgttcttctt 440
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 48.1 bits (24), Expect = 0.014 Identities = 27/28 (96%) Strand = Plus / Minus Query: 132 gttaccagcgtcaccaccctcgacgtag 159 ||||||||||||||||||||| |||||| Sbjct: 1728159 gttaccagcgtcaccaccctcaacgtag 1728132
>gb|BT013050.1| Lycopersicon esculentum clone 114306R, mRNA sequence Length = 790 Score = 48.1 bits (24), Expect = 0.014 Identities = 33/36 (91%) Strand = Plus / Minus Query: 231 cttgaagtgtgggccaacggtcaagatctcgtgcac 266 |||||||| ||||||||||| |||||||||||||| Sbjct: 619 cttgaagttcgggccaacggtgaagatctcgtgcac 584
>ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l7 (CNA06360) partial mRNA Length = 937 Score = 48.1 bits (24), Expect = 0.014 Identities = 27/28 (96%) Strand = Plus / Minus Query: 132 gttaccagcgtcaccaccctcgacgtag 159 ||||||||||||||||||||| |||||| Sbjct: 735 gttaccagcgtcaccaccctcaacgtag 708
>emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M19 on chromosome Xp11.22-11.3 Contains the 5' end of the KLF8 gene for Kruppel-like factor 8 and a ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 177483 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Minus Query: 52 cttgccaacacagggtattatcaa 75 |||||||||||||||||||||||| Sbjct: 133901 cttgccaacacagggtattatcaa 133878
>gb|AY534620.1| Pectinaria gouldii ribosomal protein L7 mRNA, complete cds Length = 802 Score = 46.1 bits (23), Expect = 0.057 Identities = 46/54 (85%) Strand = Plus / Minus Query: 210 ccacaggaagtttttngcctccttgaagtgtgggccaacggtcaagatctcgtg 263 |||||||||| | || |||| |||||||| ||||| ||||| ||||||||||| Sbjct: 635 ccacaggaagctgttggcctgcttgaagttggggcccacggtgaagatctcgtg 582
>ref|XM_510849.1| PREDICTED: Pan troglodytes similar to 60S ribosomal protein L7 (LOC453957), mRNA Length = 676 Score = 44.1 bits (22), Expect = 0.22 Identities = 30/33 (90%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgt 240 |||||||||||||| || ||||| ||||||||| Sbjct: 471 ggccacaggaagttatttgcctctttgaagtgt 439
>ref|NG_004804.2| Homo sapiens 60S ribosomal protein L7 pseudogene (LOC146110) on chromosome 16 Length = 820 Score = 44.1 bits (22), Expect = 0.22 Identities = 30/33 (90%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgt 240 |||||||||||||| || ||||| ||||||||| Sbjct: 550 ggccacaggaagttatttgcctctttgaagtgt 518
>gb|AC010601.6| Homo sapiens chromosome 16 clone CTA-481E9, complete sequence Length = 110222 Score = 44.1 bits (22), Expect = 0.22 Identities = 30/33 (90%) Strand = Plus / Plus Query: 208 ggccacaggaagtttttngcctccttgaagtgt 240 |||||||||||||| || ||||| ||||||||| Sbjct: 84820 ggccacaggaagttatttgcctctttgaagtgt 84852
>ref|XM_224246.2| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L7 (LOC305930), mRNA Length = 756 Score = 44.1 bits (22), Expect = 0.22 Identities = 30/33 (90%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgt 240 |||||||||||||| || || |||||||||||| Sbjct: 665 ggccacaggaagttatttgcttccttgaagtgt 633
>ref|XM_765641.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_609_14063_14764) partial mRNA Length = 702 Score = 42.1 bits (21), Expect = 0.89 Identities = 36/42 (85%) Strand = Plus / Plus Query: 196 ttcagntggantggccacaggaagtttttngcctccttgaag 237 ||||| |||| |||||||||||||| || ||||| |||||| Sbjct: 152 ttcagctggaacggccacaggaagttgtttgcctctttgaag 193
>ref|XM_765642.1| Giardia lamblia ATCC 50803 ribosomal protein L7 (GLP_609_14821_14114) partial mRNA Length = 708 Score = 42.1 bits (21), Expect = 0.89 Identities = 36/42 (85%) Strand = Plus / Minus Query: 196 ttcagntggantggccacaggaagtttttngcctccttgaag 237 ||||| |||| |||||||||||||| || ||||| |||||| Sbjct: 608 ttcagctggaacggccacaggaagttgtttgcctctttgaag 567
>ref|XM_779123.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal protein L7 (LOC578988), mRNA Length = 300 Score = 42.1 bits (21), Expect = 0.89 Identities = 30/33 (90%) Strand = Plus / Minus Query: 141 gtcaccaccctcgacgtagtggttcctcttctt 173 |||||||||||||||| ||||||| | |||||| Sbjct: 249 gtcaccaccctcgacgaagtggttgcccttctt 217
>gb|AF003139.2| Caenorhabditis elegans cosmid F53G12, complete sequence Length = 41553 Score = 42.1 bits (21), Expect = 0.89 Identities = 38/44 (86%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgtgggccaacggt 251 ||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 4429 ggccacaagaagttggtggcctccttgaagtgtggtccgacggt 4386
>ref|NM_058275.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-7) (rpl-7) mRNA, complete cds Length = 822 Score = 42.1 bits (21), Expect = 0.89 Identities = 38/44 (86%) Strand = Plus / Minus Query: 208 ggccacaggaagtttttngcctccttgaagtgtgggccaacggt 251 ||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 636 ggccacaagaagttggtggcctccttgaagtgtggtccgacggt 593
>gb|AF002223.2| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 209932 Score = 42.1 bits (21), Expect = 0.89 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ttcttcttcaggccaccgagc 189 ||||||||||||||||||||| Sbjct: 59304 ttcttcttcaggccaccgagc 59324
>gb|AY617897.1| Sterkiella histriomuscorum clone UGC1O0006_E04_F genomic sequence Length = 674 Score = 40.1 bits (20), Expect = 3.5 Identities = 34/39 (87%) Strand = Plus / Plus Query: 207 tggccacaggaagtttttngcctccttgaagtgtgggcc 245 |||||| |||||||| || || ||||||||||| ||||| Sbjct: 285 tggccagaggaagttgttagcttccttgaagtgagggcc 323
>gb|AY433771.1| Aedes aegypti ASAP ID: 34421 cytosolic large ribosomal subunit L7 mRNA sequence Length = 453 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 126 ctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 173 |||||||||||| |||||| ||||||||||| ||||| ||||||| Sbjct: 322 ctcacggttaccgaagtcaccgccctcgacgtaatggttgttcttctt 275
>gb|DQ440213.1| Aedes aegypti clone AET-2196 ribosomal protein L7 mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 126 ctcacggttaccagcgtcaccaccctcgacgtagtggttcctcttctt 173 |||||||||||| |||||| ||||||||||| ||||| ||||||| Sbjct: 756 ctcacggttaccgaagtcaccgccctcgacgtaatggttgttcttctt 709
>ref|XM_659619.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7107.2), mRNA Length = 750 Score = 40.1 bits (20), Expect = 3.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 126 ctcacggttaccagcgtcaccaccctcgacgtagtg 161 |||||||||||||| |||||| |||| || |||||| Sbjct: 714 ctcacggttaccagtgtcaccgccctggatgtagtg 679
>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence Length = 203180 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tagtggttcctcttcttcttcagg 180 ||||||||||||| |||||||||| Sbjct: 1172 tagtggttcctctgcttcttcagg 1195
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tagtggttcctcttcttcttcagg 180 ||||||||||||| |||||||||| Sbjct: 93291 tagtggttcctctgcttcttcagg 93314
>ref|XM_386034.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05858.1) partial mRNA Length = 1206 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gatgtagttctcacggttac 136 |||||||||||||||||||| Sbjct: 1053 gatgtagttctcacggttac 1034
>gb|AC091982.3| Homo sapiens chromosome 5 clone RP11-54C4, complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 49 atccttgccaacacagggtattatcaag 76 |||||||||||| || |||||||||||| Sbjct: 31651 atccttgccaacccaaggtattatcaag 31678
>gb|AC010312.5| Homo sapiens chromosome 5 clone CTB-62P13, complete sequence Length = 67984 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 atccttgccaacacagggtattatcaag 76 |||||||||||| || |||||||||||| Sbjct: 1243 atccttgccaacccaaggtattatcaag 1216
>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete sequence Length = 162175 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 tagtggttcctcttcttcttcagg 180 ||||||||||||| |||||||||| Sbjct: 156445 tagtggttcctctgcttcttcagg 156468 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,537,301 Number of Sequences: 3902068 Number of extensions: 2537301 Number of successful extensions: 59624 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59473 Number of HSP's gapped (non-prelim): 151 length of query: 270 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 248 effective length of database: 17,147,199,772 effective search space: 4252505543456 effective search space used: 4252505543456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)