| Clone Name | rbags36i04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | T4S1_PONPY (Q5RE43) Transmembrane 4 L6 family member 1 | 29 | 3.8 | 2 | T4S1_HUMAN (P30408) Transmembrane 4 L6 family member 1 (Tumor-as... | 28 | 8.5 |
|---|
>T4S1_PONPY (Q5RE43) Transmembrane 4 L6 family member 1| Length = 202 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 91 LMILGGNI*SYFAKGKKERKKRQNHLFLFTFFFQGSTG 204 L+ + NI YF G+ R +NHL F +FF G G Sbjct: 19 LLCIAANILLYFPNGET-RYASENHLSRFVWFFSGIVG 55
>T4S1_HUMAN (P30408) Transmembrane 4 L6 family member 1 (Tumor-associated| antigen L6) (Membrane component surface marker 1) (M3S1) Length = 202 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 91 LMILGGNI*SYFAKGKKERKKRQNHLFLFTFFFQGSTG 204 L+ + NI YF G+ + +NHL F +FF G G Sbjct: 19 LLCIAANILLYFPNGETKYAS-ENHLSRFVWFFSGIVG 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,317,986 Number of Sequences: 219361 Number of extensions: 451304 Number of successful extensions: 916 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)