>CARB_CAUCR (Q9A4D6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1099

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 14  VSIQFSMNDPHSNNMFMLHRVDSKPRLSVPTVNPRVQRKKP 136
           +++QF++ +PHS+N          PR+ V  VNPR  R  P
Sbjct: 838 MNVQFAIEEPHSDN----------PRIYVLEVNPRASRTVP 868

>HEM32_STRCO (Q9KY00) Porphobilinogen deaminase 2 (EC 2.5.1.61) (PBG 2)|
           (Hydroxymethylbilane synthase 2) (HMBS 2)
           (Pre-uroporphyrinogen synthase 2)
          Length = 313

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 259 LPAHEHAAYQGHAPIFKCXN*LVCAAYEFSHDGKEVFNSHAWLFPLDP 116
           L  H ++   GHA + +    L   A  F+ DGK   N+H W   LDP
Sbjct: 242 LQGHCNSPIAGHAQVDRSGE-LSLRACVFTPDGKVRLNAHEWAGRLDP 288

>HEM32_STRAW (Q82P95) Porphobilinogen deaminase 2 (EC 2.5.1.61) (PBG 2)|
           (Hydroxymethylbilane synthase 2) (HMBS 2)
           (Pre-uroporphyrinogen synthase 2)
          Length = 314

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 175 FSHDGKEVFNSHAWLFPLDP 116
           F+ DGK V N+H W   LDP
Sbjct: 270 FTLDGKTVLNAHEWAGRLDP 289


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,263,273
Number of Sequences: 219361
Number of extensions: 766265
Number of successful extensions: 1824
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)