ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ML423_ARATH (Q93VR4) MLP-like protein 423 61 3e-09
2MLP34_ARATH (Q9SSK7) MLP-like protein 34 55 2e-07
3MLP28_ARATH (Q9SSK9) MLP-like protein 28 54 3e-07
4MLP31_ARATH (Q941R6) MLP-like protein 31 50 4e-06
5MLP43_ARATH (Q9SSK5) MLP-like protein 43 48 2e-05
6ML146_PAPSO (Q06394) Major latex protein 146 (MLP 146) 43 6e-04
7MLP15_PAPSO (P19825) Major latex protein 15 (MLP 15) (gMLP15) 40 0.007
8MLP22_PAPSO (Q41020) Major latex protein 22 (MLP 22) (gMLP22) 39 0.011
9ML149_PAPSO (Q06395) Major latex protein 149 (MLP 149) 38 0.025
10Y1400_ARATH (P0C0B0) Hypothetical protein At1g24000 33 0.62

>ML423_ARATH (Q93VR4) MLP-like protein 423|
          Length = 155

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 561 YXEGVPMVTFXXXXXXXXXXXXKLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVV 382
           Y EG P+V              K +SYS++ GE++ +YK F+ T+ V  K   DG G+++
Sbjct: 60  YGEGSPLVKISAERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPK---DG-GSLL 115

Query: 381 NWTMDFDKASDEVPEPDVIKETAAKTF 301
            W+ +F+K + E+ +P VIK+ A K F
Sbjct: 116 KWSGEFEKTAHEIDDPHVIKDFAVKNF 142



to top

>MLP34_ARATH (Q9SSK7) MLP-like protein 34|
          Length = 316

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 22/56 (39%), Positives = 41/56 (73%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVI 325
           L+++ V++G+L+  YK+F +T+QVT K    G G++V+W ++++K SDEV  P+ +
Sbjct: 88  LITFRVIEGDLMKEYKSFLITIQVTPKHG--GPGSIVHWHLEYEKISDEVAHPETL 141



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/62 (35%), Positives = 43/62 (69%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVIKETA 313
           L+++ V++G+L+  YK+F +T+QVT K    G G+VV+W  +++K ++EV  P+ + + A
Sbjct: 244 LITFRVIEGDLMKEYKSFVITIQVTPKHG--GSGSVVHWHFEYEKINEEVAHPETLLQFA 301

Query: 312 AK 307
            +
Sbjct: 302 VE 303



to top

>MLP28_ARATH (Q9SSK9) MLP-like protein 28|
          Length = 335

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 22/56 (39%), Positives = 41/56 (73%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVI 325
           L+++ V+DG+L+  YK+F +T+QVT K    G G++V+W ++++K S+EV  P+ +
Sbjct: 263 LITFRVIDGDLMKEYKSFLLTIQVTPK--LGGPGSIVHWHLEYEKISEEVAHPETL 316



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 41/56 (73%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVI 325
           L+++ V++G+L+  YK+F +T+QVT K    G G++V+W ++++K S+EV  P+ +
Sbjct: 101 LITFRVIEGDLMKEYKSFLLTIQVTPK--PGGPGSIVHWHLEYEKISEEVAHPETL 154



to top

>MLP31_ARATH (Q941R6) MLP-like protein 31|
          Length = 162

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 21/54 (38%), Positives = 39/54 (72%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPD 331
           L+++ V++G+L+  YK+F +T+QVT K    G G+VV+W ++++K  D+V  P+
Sbjct: 90  LITFRVIEGDLLKEYKSFVITIQVTPK--RGGPGSVVHWHVEYEKIDDKVAHPE 141



to top

>MLP43_ARATH (Q9SSK5) MLP-like protein 43|
          Length = 158

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 39/56 (69%)
 Frame = -3

Query: 492 LVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVI 325
           L+++ V++G+L++ YK+F  T+QVT K      G++ +W ++++K S+EV  P+ +
Sbjct: 86  LITFKVLEGDLMNEYKSFAFTLQVTPKQGES--GSIAHWHLEYEKISEEVAHPETL 139



to top

>ML146_PAPSO (Q06394) Major latex protein 146 (MLP 146)|
          Length = 159

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 34/52 (65%)
 Frame = -3

Query: 489 VSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEP 334
           + + VV G+L++ YK F  T+ V  K  ++G G +V WT+D++K +++ P P
Sbjct: 88  IHHMVVAGDLMNDYKKFDATLVVNPK--SNGHGCIVKWTIDYEKMNEDSPVP 137



to top

>MLP15_PAPSO (P19825) Major latex protein 15 (MLP 15) (gMLP15)|
          Length = 159

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 16/52 (30%), Positives = 35/52 (67%)
 Frame = -3

Query: 489 VSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEP 334
           ++++ ++G +++ YK F  T+ V  K  A+G G++V W +D++K +++ P P
Sbjct: 88  INHNGIEGGMMNDYKKFVATLVVKPK--ANGQGSIVTWIVDYEKINEDSPVP 137



to top

>MLP22_PAPSO (Q41020) Major latex protein 22 (MLP 22) (gMLP22)|
          Length = 158

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 19/52 (36%), Positives = 33/52 (63%)
 Frame = -3

Query: 489 VSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEP 334
           + +S V+G L+  YK F  T+ V  K  ADG G++V W ++++K +++ P P
Sbjct: 89  IHHSTVEGVLLDDYKKFDATL-VNPK--ADGHGSIVTWIVEYEKINEDSPVP 137



to top

>ML149_PAPSO (Q06395) Major latex protein 149 (MLP 149)|
          Length = 159

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 16/52 (30%), Positives = 34/52 (65%)
 Frame = -3

Query: 489 VSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEP 334
           + +S+ +G+L++ YK F  T+ V  K   +G G++V + +D++K +++ P P
Sbjct: 88  ICHSISEGDLMNDYKKFDATLVVDPKD--NGHGSIVKYILDYEKINEDSPVP 137



to top

>Y1400_ARATH (P0C0B0) Hypothetical protein At1g24000|
          Length = 122

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -3

Query: 465 ELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDFDKASDEVPEPDVIKETAAKTF 301
           E+  ++K  + ++ VT  G  DG   V  WT  F+K   ++ +P  I + + K F
Sbjct: 58  EIQKYFKTLKGSIAVTPIGVGDGSHVV--WTFHFEKVHKDIDDPHSIIDESVKYF 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,456,747
Number of Sequences: 219361
Number of extensions: 928798
Number of successful extensions: 2537
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2532
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top