ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_184768.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.001
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 52 0.001
5emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in... 48 0.019
6gb|AC154033.1| Solanum demissum chromosome 5 clone PGEC132D05 ma... 42 1.2
7gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 geno... 42 1.2
8emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 1.2
9emb|AL645982.26| Mouse DNA sequence from clone DN-452A22 on chro... 42 1.2
10emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in... 42 1.2
11emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in... 42 1.2
12gb|AC104161.2| Homo sapiens chromosome 3 clone RP11-32J15, compl... 42 1.2
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
14gb|AC097662.5| Homo sapiens BAC clone RP11-563C6 from 2, complet... 42 1.2
15dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
16gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, comple... 42 1.2
17emb|AL662862.16| Mouse DNA sequence from clone CT7-139P23 on chr... 42 1.2
18emb|AL691478.5| Mouse DNA sequence from clone RP23-137F6 on chro... 42 1.2
19ref|NM_021999.2| Homo sapiens integral membrane protein 2B (ITM2... 40 4.7
20gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, comp... 40 4.7
21gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, co... 40 4.7
22gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromo... 40 4.7
23gb|U53336.1| Caenorhabditis elegans cosmid K07C11, complete sequ... 40 4.7
24gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosom... 40 4.7
25gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosom... 40 4.7
26ref|XM_960957.1| Plasmodium falciparum 3D7 hypothetical protein ... 40 4.7
27gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, c... 40 4.7
28emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chr... 40 4.7
29gb|AF086918.1| Homo sapiens E3-16 mRNA, complete cds 40 4.7
30gb|AY341247.1| Homo sapiens integral membrane protein 2B (ITM2B)... 40 4.7
31emb|AL139322.13| Human DNA sequence from clone RP11-196P14 on ch... 40 4.7
32emb|AL137184.15| Human DNA sequence from clone RP3-401D24 on chr... 40 4.7
33gb|AC158903.4| Mus musculus chromosome 18, clone RP23-318E22, co... 40 4.7
34emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 4.7
35gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, compl... 40 4.7
36gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromo... 40 4.7
37gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence 40 4.7
38emb|BX321875.7| Zebrafish DNA sequence from clone CH211-254C8 in... 40 4.7
39emb|CR626358.1| full-length cDNA clone CS0DE009YK12 of Placenta ... 40 4.7
40emb|CR610712.1| full-length cDNA clone CS0DI061YL18 of Placenta ... 40 4.7
41emb|CR590893.1| full-length cDNA clone CS0DN004YE20 of Adult bra... 40 4.7
42gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, com... 40 4.7
43gb|AC024995.8| Homo sapiens, clone RP11-328L11, complete sequence 40 4.7
44dbj|AB168350.1| Macaca fascicularis testis cDNA clone: QtsA-1143... 40 4.7
45gb|AC092717.2| Drosophila melanogaster, chromosome 2L, region 36... 40 4.7
46ref|NM_072717.2| Caenorhabditis elegans K07C11.9 (K07C11.9) mRNA... 40 4.7
47gb|AF130089.1|AF130089 Homo sapiens clone FLB9440 PRO2550 mRNA, ... 40 4.7
48gb|AC007173.6|AC007173 Drosophila melanogaster, chromosome 2L, r... 40 4.7
49gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.7
50gb|AF136973.1|AF136973 Homo sapiens putative transmembrane prote... 40 4.7
51gb|AF449578.1| Pycreus mundtii trnL-trnF intergenic spacer regio... 40 4.7
52gb|AF246221.1|AF246221 Homo sapiens transmembrane protein BRI mR... 40 4.7
53emb|BX545918.4| Zebrafish DNA sequence from clone DKEYP-22F11 in... 40 4.7
54emb|BX005108.8| Zebrafish DNA sequence from clone CH211-268B13 i... 40 4.7
55dbj|AK130048.1| Homo sapiens cDNA FLJ26538 fis, clone KDN09296, ... 40 4.7
56gb|AF152462.1|AF152462 Homo sapiens transmembrane protein BRI (B... 40 4.7
57gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67... 40 4.7
58gb|DQ307173.1| Glossina morsitans morsitans clone TC1637 serine ... 40 4.7
59emb|AL845264.18| Mouse DNA sequence from clone RP23-116F18 on ch... 40 4.7
60emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on ch... 40 4.7
61gb|AC012557.23| Homo sapiens 3 BAC RP11-245J9 (Roswell Park Canc... 40 4.7
62dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.7
63emb|AL354926.17| Human DNA sequence from clone RP1-216J23 on chr... 40 4.7

>ref|NM_184768.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 288 gccangatgaactccgtgttggccacccccatggccagccc 328
           |||| |||||||||  |||||||||| ||||||||||||||
Sbjct: 908 gccaagatgaactcgatgttggccactcccatggccagccc 868



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 288      gccangatgaactccgtgttggccacccccatggccagccc 328
                |||| |||||||||  |||||||||| ||||||||||||||
Sbjct: 20365334 gccaagatgaactcgatgttggccactcccatggccagccc 20365294



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 288      gccangatgaactccgtgttggccacccccatggccagccc 328
                |||| |||||||||  |||||||||| ||||||||||||||
Sbjct: 20358363 gccaagatgaactcgatgttggccactcccatggccagccc 20358323



to top

>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence,
            complete sequence
          Length = 152883

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 288  gccangatgaactccgtgttggccacccccatggccagccc 328
            |||| |||||||||  |||||||||| ||||||||||||||
Sbjct: 9634 gccaagatgaactcgatgttggccactcccatggccagccc 9594



to top

>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23,
              complete sequence
          Length = 220945

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 102    tttatttttatttaaagaaaagcatata 129
              ||||||||||||||||||| ||||||||
Sbjct: 172635 tttatttttatttaaagaacagcatata 172662



to top

>gb|AC154033.1| Solanum demissum chromosome 5 clone PGEC132D05 map MAP_LOC, complete
             sequence
          Length = 118497

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   tttatttttatttaaagaaaa 122
             |||||||||||||||||||||
Sbjct: 41417 tttatttttatttaaagaaaa 41437



to top

>gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 genomic sequence, complete
             sequence
          Length = 110954

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   tttatttttatttaaagaaaa 122
             |||||||||||||||||||||
Sbjct: 47126 tttatttttatttaaagaaaa 47146



to top

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 102     tttatttttatttaaagaaaagcat 126
               ||||||||||| |||||||||||||
Sbjct: 3000327 tttatttttatgtaaagaaaagcat 3000351



to top

>emb|AL645982.26| Mouse DNA sequence from clone DN-452A22 on chromosome 3 Contains the 5'
              end of the Fgf2 gene for fibroblast growth factor 2, a
              novel gene (A930011G24RIK), a mitochondrial ribosomal
              protein S33 (Mrps33) pseudogene, a novel gene (gene model
              1805 (NCBI) (Gm1805)), the Cetn4 gene for centrin 4, a
              novel gene, the 5' end of the Il21 gene for interleukin 21
              and a CpG island, complete sequence
          Length = 133023

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    tttatttttatttaaagaaaa 122
              |||||||||||||||||||||
Sbjct: 107274 tttatttttatttaaagaaaa 107294



to top

>emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in linkage group 21,
              complete sequence
          Length = 181119

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     attactaattgattgaatggg 38
              |||||||||||||||||||||
Sbjct: 103352 attactaattgattgaatggg 103372



to top

>emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in linkage group 20
             Contains a novel gene and a CpG island, complete sequence
          Length = 132841

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   gtttatttttatttaaagaaa 121
             |||||||||||||||||||||
Sbjct: 33250 gtttatttttatttaaagaaa 33270



to top

>gb|AC104161.2| Homo sapiens chromosome 3 clone RP11-32J15, complete sequence
          Length = 166659

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   tttatttttatttaaagaaaa 122
             |||||||||||||||||||||
Sbjct: 99349 tttatttttatttaaagaaaa 99369



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 107      ttttatttaaagaaaagcatatagaaaat 135
                |||| |||||||||||||||||| |||||
Sbjct: 11712444 ttttttttaaagaaaagcatatacaaaat 11712472



to top

>gb|AC097662.5| Homo sapiens BAC clone RP11-563C6 from 2, complete sequence
          Length = 206624

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   gtttatttttatttaaagaaa 121
             |||||||||||||||||||||
Sbjct: 58243 gtttatttttatttaaagaaa 58263



to top

>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 107    ttttatttaaagaaaagcatatagaaaat 135
              |||| |||||||||||||||||| |||||
Sbjct: 147078 ttttttttaaagaaaagcatatacaaaat 147106



to top

>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence
          Length = 228174

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   ccacccccatggccagccctg 330
             |||||||||||||||||||||
Sbjct: 78162 ccacccccatggccagccctg 78142



to top

>emb|AL662862.16| Mouse DNA sequence from clone CT7-139P23 on chromosome 3, complete
             sequence
          Length = 120808

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   tttatttttatttaaagaaaa 122
             |||||||||||||||||||||
Sbjct: 26274 tttatttttatttaaagaaaa 26294



to top

>emb|AL691478.5| Mouse DNA sequence from clone RP23-137F6 on chromosome 3, complete
             sequence
          Length = 120928

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   tttatttttatttaaagaaaa 122
             |||||||||||||||||||||
Sbjct: 87429 tttatttttatttaaagaaaa 87449



to top

>ref|NM_021999.2| Homo sapiens integral membrane protein 2B (ITM2B), mRNA
          Length = 1896

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1821 ttatttttatttaaagaaaa 1802



to top

>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence
          Length = 172348

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  cccccatggccagccctggacaga 336
            ||||||||||||||| ||||||||
Sbjct: 8685 cccccatggccagccatggacaga 8662



to top

>gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, complete sequence
          Length = 232199

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tatttttatttaaagaaaag 123
              ||||||||||||||||||||
Sbjct: 202914 tatttttatttaaagaaaag 202895



to top

>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete
             sequence
          Length = 196547

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttatttttatttaaagaaaa 122
             ||||||||||||||||||||
Sbjct: 10455 ttatttttatttaaagaaaa 10474



to top

>gb|U53336.1| Caenorhabditis elegans cosmid K07C11, complete sequence
          Length = 31889

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   tttatttttatttaaagaaa 121
             ||||||||||||||||||||
Sbjct: 21037 tttatttttatttaaagaaa 21056



to top

>gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosome 18, complete
            sequence
          Length = 149264

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  ttatttaaagaaaagcatat 128
            ||||||||||||||||||||
Sbjct: 4118 ttatttaaagaaaagcatat 4137



to top

>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete
             sequence
          Length = 181200

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 115   aaagaaaagcatatagaaaatactactt 142
             ||||||||||| |||| |||||||||||
Sbjct: 66513 aaagaaaagcacatagcaaatactactt 66540



to top

>ref|XM_960957.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0295c) partial
            mRNA
          Length = 3192

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  atttaaagaaaagcatatagaaaa 134
            |||||||||| |||||||||||||
Sbjct: 1992 atttaaagaagagcatatagaaaa 2015



to top

>gb|AC108392.17| Mus musculus chromosome 10, clone RP23-121B23, complete sequence
          Length = 207763

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 313   cccccatggccagccctggacaga 336
             ||||||||||||||| ||||||||
Sbjct: 23836 cccccatggccagccatggacaga 23859



to top

>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains the
             TLX1 gene for T-cell leukemia homeobox 1, the 5' end of a
             novel gene, the C10orf1 gene for chromosome 10 open
             reading frame 1 and four CpG islands, complete sequence
          Length = 51099

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   tttatttttatttaaagaaa 121
             ||||||||||||||||||||
Sbjct: 13451 tttatttttatttaaagaaa 13470



to top

>gb|AF086918.1| Homo sapiens E3-16 mRNA, complete cds
          Length = 1752

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1727 ttatttttatttaaagaaaa 1708



to top

>gb|AY341247.1| Homo sapiens integral membrane protein 2B (ITM2B) gene, complete cds
          Length = 31401

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ttatttttatttaaagaaaa 122
             ||||||||||||||||||||
Sbjct: 30040 ttatttttatttaaagaaaa 30021



to top

>emb|AL139322.13| Human DNA sequence from clone RP11-196P14 on chromosome 13 Contains the
             ITM2B gene for integral membrane protein 2B (BRI FBD E25B
             E3-16) and a CpG island, complete sequence
          Length = 120773

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ttatttttatttaaagaaaa 122
             ||||||||||||||||||||
Sbjct: 94260 ttatttttatttaaagaaaa 94241



to top

>emb|AL137184.15| Human DNA sequence from clone RP3-401D24 on chromosome 6, complete
             sequence
          Length = 112124

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttatttttatttaaagaaaa 122
             ||||||||||||||||||||
Sbjct: 22695 ttatttttatttaaagaaaa 22714



to top

>gb|AC158903.4| Mus musculus chromosome 18, clone RP23-318E22, complete sequence
          Length = 201073

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ttatttaaagaaaagcatat 128
             ||||||||||||||||||||
Sbjct: 50718 ttatttaaagaaaagcatat 50699



to top

>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    atttaaagaaaagcatatagaaaa 134
              |||||||||| |||||||||||||
Sbjct: 251809 atttaaagaagagcatatagaaaa 251786



to top

>gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, complete sequence
          Length = 178337

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tttaaagaaaagcatataga 131
             ||||||||||||||||||||
Sbjct: 27313 tttaaagaaaagcatataga 27294



to top

>gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromosome 6, complete
              sequence
          Length = 158234

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    ttatttttatttaaagaaaa 122
              ||||||||||||||||||||
Sbjct: 114855 ttatttttatttaaagaaaa 114874



to top

>gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence
          Length = 173428

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    catggccagccctggacaga 336
              ||||||||||||||||||||
Sbjct: 139058 catggccagccctggacaga 139077



to top

>emb|BX321875.7| Zebrafish DNA sequence from clone CH211-254C8 in linkage group 16,
             complete sequence
          Length = 169994

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tttttatttaaagaaaagca 125
             ||||||||||||||||||||
Sbjct: 17597 tttttatttaaagaaaagca 17578



to top

>emb|CR626358.1| full-length cDNA clone CS0DE009YK12 of Placenta of Homo sapiens
            (human)
          Length = 1810

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1752 ttatttttatttaaagaaaa 1733



to top

>emb|CR610712.1| full-length cDNA clone CS0DI061YL18 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1741

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1741 ttatttttatttaaagaaaa 1722



to top

>emb|CR590893.1| full-length cDNA clone CS0DN004YE20 of Adult brain of Homo sapiens
            (human)
          Length = 1764

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1734 ttatttttatttaaagaaaa 1715



to top

>gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, complete sequence
          Length = 180614

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tatttttatttaaagaaaag 123
              ||||||||||||||||||||
Sbjct: 167197 tatttttatttaaagaaaag 167216



to top

>gb|AC024995.8| Homo sapiens, clone RP11-328L11, complete sequence
          Length = 171873

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   catggccagccctggacaga 336
             ||||||||||||||||||||
Sbjct: 39610 catggccagccctggacaga 39629



to top

>dbj|AB168350.1| Macaca fascicularis testis cDNA clone: QtsA-11432, similar to human
            integral membrane protein 2B (ITM2B), mRNA, RefSeq:
            NM_021999.2
          Length = 1851

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1763 ttatttttatttaaagaaaa 1744



to top

>gb|AC092717.2| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone
             BACR05N10, complete sequence
          Length = 169600

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   gtttatttttatttaaagaaaagc 124
             ||||||||||||||||| ||||||
Sbjct: 94491 gtttatttttatttaaaaaaaagc 94468



to top

>ref|NM_072717.2| Caenorhabditis elegans K07C11.9 (K07C11.9) mRNA, complete cds
          Length = 2215

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  tttatttttatttaaagaaa 121
            ||||||||||||||||||||
Sbjct: 2208 tttatttttatttaaagaaa 2189



to top

>gb|AF130089.1|AF130089 Homo sapiens clone FLB9440 PRO2550 mRNA, complete cds
          Length = 2144

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 2083 ttatttttatttaaagaaaa 2064



to top

>gb|AC007173.6|AC007173 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone
             BACR01A03, complete sequence
          Length = 155254

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   gtttatttttatttaaagaaaagc 124
             ||||||||||||||||| ||||||
Sbjct: 67577 gtttatttttatttaaaaaaaagc 67554



to top

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 248     cccctgagggagcgcccagttgaa 271
               |||||||| |||||||||||||||
Sbjct: 3214193 cccctgagcgagcgcccagttgaa 3214170



to top

>gb|AF136973.1|AF136973 Homo sapiens putative transmembrane protein E3-16 mRNA, complete cds
          Length = 1896

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1821 ttatttttatttaaagaaaa 1802



to top

>gb|AF449578.1| Pycreus mundtii trnL-trnF intergenic spacer region, plastid
           sequence
          Length = 409

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 106 tttttatttaaagaaaagcatatagaaa 133
           ||||| |||||| |||||||||||||||
Sbjct: 170 tttttttttaaataaaagcatatagaaa 143



to top

>gb|AF246221.1|AF246221 Homo sapiens transmembrane protein BRI mRNA, complete cds
          Length = 1853

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1786 ttatttttatttaaagaaaa 1767



to top

>emb|BX545918.4| Zebrafish DNA sequence from clone DKEYP-22F11 in linkage group 8,
             complete sequence
          Length = 149121

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gaaataacacaacaaattaa 71
             ||||||||||||||||||||
Sbjct: 12200 gaaataacacaacaaattaa 12181



to top

>emb|BX005108.8| Zebrafish DNA sequence from clone CH211-268B13 in linkage group 9,
             complete sequence
          Length = 171835

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   tttttatttaaagaaaagcatata 129
             ||||||||||||||| ||||||||
Sbjct: 18789 tttttatttaaagaacagcatata 18766



to top

>dbj|AK130048.1| Homo sapiens cDNA FLJ26538 fis, clone KDN09296, highly similar to
            Integral membrane protein 2B
          Length = 1825

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1765 ttatttttatttaaagaaaa 1746



to top

>gb|AF152462.1|AF152462 Homo sapiens transmembrane protein BRI (BRI) mRNA, complete cds
          Length = 1843

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1776 ttatttttatttaaagaaaa 1757



to top

>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete
              sequence
          Length = 262745

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    gtttatttttatttaaagaaaagc 124
              ||||||||||||||||| ||||||
Sbjct: 168226 gtttatttttatttaaaaaaaagc 168203



to top

>gb|DQ307173.1| Glossina morsitans morsitans clone TC1637 serine protease inhibitor 4
            (Spn4) mRNA, complete cds
          Length = 1380

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ttatttttatttaaagaaaa 122
            ||||||||||||||||||||
Sbjct: 1361 ttatttttatttaaagaaaa 1342



to top

>emb|AL845264.18| Mouse DNA sequence from clone RP23-116F18 on chromosome 2, complete
             sequence
          Length = 207724

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   tttatttttatttaaagaaa 121
             ||||||||||||||||||||
Sbjct: 91146 tttatttttatttaaagaaa 91165



to top

>emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on chromosome X, complete
            sequence
          Length = 202742

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  acttctcctccttgtctggg 158
            ||||||||||||||||||||
Sbjct: 9870 acttctcctccttgtctggg 9851



to top

>gb|AC012557.23| Homo sapiens 3 BAC RP11-245J9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 189220

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tttaaagaaaagcatataga 131
             ||||||||||||||||||||
Sbjct: 31347 tttaaagaaaagcatataga 31366



to top

>dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1483D9
          Length = 162604

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   catggccagccctggacaga 336
             ||||||||||||||||||||
Sbjct: 29375 catggccagccctggacaga 29356



to top

>emb|AL354926.17| Human DNA sequence from clone RP1-216J23 on chromosome 6, complete
             sequence
          Length = 163140

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttatttttatttaaagaaaa 122
             ||||||||||||||||||||
Sbjct: 64981 ttatttttatttaaagaaaa 65000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,224,456
Number of Sequences: 3902068
Number of extensions: 4224456
Number of successful extensions: 126820
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126577
Number of HSP's gapped (non-prelim): 243
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top