ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36g15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABIL1_ORYSA (Q9AXA6) Probable protein ABIL1 (Abl interactor-like... 72 5e-13
2ABIL4_ORYSA (Q6I588) Probable protein ABIL4 (Abl interactor-like... 68 7e-12
3ABIL1_ARATH (Q8S8M5) Protein ABIL1 (Abl interactor-like protein ... 37 0.014
4YJJ7_YEAST (P40857) Hypothetical 24.5 kDa protein in SAP185-BCK1... 28 8.2
5CYTB_PANTR (Q8I030) Cystatin B (Stefin B) 28 8.2

>ABIL1_ORYSA (Q9AXA6) Probable protein ABIL1 (Abl interactor-like protein 1)|
          Length = 306

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = -1

Query: 231 GXKXQTGXKHMXTXSSFDRPTGREIQKAPANTKSVLASLFMKHKSAKMKSISAR 70
           G K Q G +H+ + SSFD P GR+IQKAP  TKS+LA+ F+KHKS KMK++S R
Sbjct: 253 GMKDQPGVRHLSSFSSFDNPRGRQIQKAPLRTKSMLAAFFVKHKSGKMKNVSVR 306



to top

>ABIL4_ORYSA (Q6I588) Probable protein ABIL4 (Abl interactor-like protein 4)|
          Length = 302

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 231 GXKXQTGXKHMXTXSSFDRPTGREIQKAPANTKSVLASLFMKHKSAKMKSISAR 70
           G K Q G  HM T ++ D+P GREIQK P +TKS+LA+LF+KHKSAK +  S R
Sbjct: 249 GSKDQPGFMHMSTFNALDKPRGREIQKVPVSTKSMLATLFIKHKSAKTRKASVR 302



to top

>ABIL1_ARATH (Q8S8M5) Protein ABIL1 (Abl interactor-like protein 1) (AtABIL1)|
          Length = 298

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 207 KHMXTXSSFDRPTGREIQKAPANTKSVLASLFMKHKSAKMKS 82
           K +    S D    REI +AP  TKSVL++ F+K K+ K+K+
Sbjct: 253 KLLTAHRSLDNNPRREIIQAPVRTKSVLSAFFVKQKTPKLKA 294



to top

>YJJ7_YEAST (P40857) Hypothetical 24.5 kDa protein in SAP185-BCK1 intergenic|
           region
          Length = 217

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 83  LFIFADLCFINRDASTLLVLA-GAFWISRPVGLSKELXVXIC 205
           L+ F  L F N     L++L    FWI  P G++ EL +  C
Sbjct: 121 LYYFFMLVFKNGAPKILILLRYNLFWILYPTGVASELRIIYC 162



to top

>CYTB_PANTR (Q8I030) Cystatin B (Stefin B)|
          Length = 98

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 18  LACTDYYNKLHLHQQRIIGLRYFSSLP 98
           +A T+Y+ K+H+  +  + LR F SLP
Sbjct: 48  VAGTNYFIKVHVGDEEFVHLRVFQSLP 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,191,559
Number of Sequences: 219361
Number of extensions: 373050
Number of successful extensions: 669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top