ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X64561.1|HVHSP18A H.vulgare hsp18 mRNA for 18 kd heat shock ... 333 1e-88
2gb|L37073.1|WHTHSP169O Triticum aestivum clone 3LC1 heat shock p... 127 2e-26
3gb|L37072.1|WHTHSP169N Triticum aestivum clone 2LC2 heat shock p... 127 2e-26
4gb|L37066.1|WHTHSP169H Triticum aestivum heat shock protein 16.9... 111 9e-22
5gb|L37076.1|WHTHSP169R Triticum aestivum clone 8LC3 heat shock p... 111 9e-22
6gb|L37065.1|WHTHSP169G Triticum aestivum heat shock protein 16.9... 103 2e-19
7gb|L37067.1|WHTHSP169I Triticum aestivum clone 15LC1 heat shock ... 101 9e-19
8emb|X64618.1|TAHSP169B T.aestivum mRNA for heat shock protein 16.9B 101 9e-19
9gb|L37075.1|WHTHSP169Q Triticum aestivum clone 5LC1 heat shock p... 86 5e-14
10gb|L37070.1|WHTHSP169L Triticum aestivum clone 17LC3 heat shock ... 86 5e-14
11gb|L37069.1|WHTHSP169K Triticum aestivum clone 17LC1 heat shock ... 86 5e-14
12gb|L37068.1|WHTHSP169J Triticum aestivum clone 16LC3 heat shock ... 86 5e-14
13gb|L14444.1|WHTHSP169C Triticum aestivum heat shock protein 16.9... 84 2e-13
14emb|X13431.1|TAHSPLW Wheat mRNA for putative low molecular weigh... 82 8e-13
15emb|X64560.1|HVHSP17A H.vulgare hsp17 gene for 17 kd heat shock ... 78 1e-11
16emb|Y07844.1|HV17HSP H.vulgare mRNA for 17 kDa class I small hea... 74 2e-10
17ref|XM_462738.2| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
19dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
20dbj|AK121025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
21gb|M80939.1|RICHSEB Oryza sativa 16.9 kDa heat shock protein gen... 68 1e-08
22ref|XM_462737.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-07
23emb|X94191.1|PGHSP170 P.glaucum mRNA for heat shock protein, HSP... 64 2e-07
24emb|X60820.1|OSLMWHSP O.sativa mRNA for 16.9 kD low molecular we... 64 2e-07
25gb|M80938.1|RICHSEA Oryza sativa 16.9 kDa heat shock protein gen... 64 2e-07
26gb|AY111665.1| Zea mays CL13719_1 mRNA sequence 62 8e-07
27ref|XM_462736.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-06
28gb|AF007762.1| Agrostis stolonifera var. palustris heat shock pr... 60 3e-06
29emb|X94192.1|PGHSP169 P.glaucum mRNA for heat shock protein, HSP... 52 8e-04
30gb|U81385.1|OSU81385 Oryza sativa heat shock protein (Oshsp16.9C... 52 8e-04
31emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP... 48 0.012
32gb|AC091401.2| Sus scrofa clone RP44-198J22, complete sequence 44 0.18
33gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, co... 42 0.73
34emb|BX465192.7| Zebrafish DNA sequence from clone CH211-202P4 in... 40 2.9
35gb|AY109481.1| Zea mays CL2172_1 mRNA sequence 40 2.9 
>emb|X64561.1|HVHSP18A H.vulgare hsp18 mRNA for 18 kd heat shock protein
          Length = 549

 Score =  333 bits (168), Expect = 1e-88
 Identities = 202/214 (94%), Gaps = 1/214 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actacattnatcnattgcgattacacaagtacacaaacgaccgaggtaaagaaacgcgat 60
           |||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 513 actacatttattcattgcgattacacaagtacacaaacgaccgagg-aaagaaacgcgat 455

                                                                       
Query: 61  acagagatgcctcaaccagactcgacaagaacaaatcacaactgtatttaggctgcagaa 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 454 acagagatgcctcaaccagactcgacaagaacaagtcacaactgtatttaggctgcagaa 395

                                                                       
Query: 121 ctcgcacacacatnaaccagaatggctccgactcgaatactcagtcggagatntcgatgg 180
           ||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 394 ctcgcacacacatcaaccagaatggctccgactcgaatacgcagccggagatctcgatgg 335

                                             
Query: 181 ccttcacctcgggcttcttnacctcggncttggg 214
           ||||||||||||||||||| ||||| | ||||||
Sbjct: 334 ccttcacctcgggcttcttgacctctgtcttggg 301
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>gb|L37073.1|WHTHSP169O Triticum aestivum clone 3LC1 heat shock protein 16.9 (hsp16.9-3LC1)
           mRNA, partial cds
          Length = 250

 Score =  127 bits (64), Expect = 2e-26
 Identities = 97/108 (89%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 107 tttaggctgcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtc 166
           ||||||||||||||||||||||||||| ||||||| ||| |||||| ||  ||||||  |
Sbjct: 119 tttaggctgcagaactcgcacacacatgaaccagactgggtccgacccgg-tactcaacc 61

                                                           
Query: 167 ggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 60  ggagatctcgatggccttcacctcgggcttcttgacctcggccttggg 13
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>gb|L37072.1|WHTHSP169N Triticum aestivum clone 2LC2 heat shock protein 16.9 (hsp16.9-2LC2)
           mRNA, partial cds
          Length = 248

 Score =  127 bits (64), Expect = 2e-26
 Identities = 96/108 (88%)
 Strand = Plus / Minus

                                                                       
Query: 107 tttaggctgcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtc 166
           |||||||||||||||| |||||||||| ||||||| |||||| ||| | ||||||||| |
Sbjct: 120 tttaggctgcagaacttgcacacacatgaaccagactggctctgacccaaatactcagcc 61

                                                           
Query: 167 ggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||| || ||||||||||| |||||||||||||| ||||||| ||||||
Sbjct: 60  ggatatctcgatggccttgacctcgggcttcttgacctcggccttggg 13
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>gb|L37066.1|WHTHSP169H Triticum aestivum heat shock protein 16.9 (hsp16.9-14LC1) mRNA,
           partial cds
          Length = 263

 Score =  111 bits (56), Expect = 9e-22
 Identities = 89/100 (89%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                       
Query: 115 gcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtcggagatnt 174
           ||||| ||||||||||||| |||||||  ||||| ||| ||| ||||||| ||||||| |
Sbjct: 111 gcagagctcgcacacacatgaaccagacaggctctgacccga-tactcagccggagatct 53

                                                   
Query: 175 cgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 52  cgatggccttcacctcgggcttcttgacctcggccttggg 13
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>gb|L37076.1|WHTHSP169R Triticum aestivum clone 8LC3 heat shock protein 16.9 (hsp16.9-8LC3)
           mRNA, partial cds
          Length = 275

 Score =  111 bits (56), Expect = 9e-22
 Identities = 89/100 (89%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                       
Query: 115 gcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtcggagatnt 174
           ||||| ||||||||||||| |||||||  ||||| ||| ||| ||||||| ||||||| |
Sbjct: 111 gcagagctcgcacacacatgaaccagacaggctctgacccga-tactcagccggagatct 53

                                                   
Query: 175 cgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 52  cgatggccttcacctcgggcttcttgacctcggccttggg 13
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>gb|L37065.1|WHTHSP169G Triticum aestivum heat shock protein 16.9 (hsp16.9-13LC1) mRNA,
           partial cds
          Length = 219

 Score =  103 bits (52), Expect = 2e-19
 Identities = 88/100 (88%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                       
Query: 115 gcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtcggagatnt 174
           ||||| ||||||||||||| |||||||  ||||| ||| ||| ||||||| ||||||| |
Sbjct: 111 gcagagctcgcacacacatgaaccagacaggctctgacccga-tactcagccggagatct 53

                                                   
Query: 175 cgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||||||||||||||||||||||| |||| || ||||||
Sbjct: 52  cgatggccttcacctcgggcttcttgacctgggccttggg 13
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>gb|L37067.1|WHTHSP169I Triticum aestivum clone 15LC1 heat shock protein 16.9
           (hsp16.9-15LC1) mRNA, partial cds
          Length = 204

 Score =  101 bits (51), Expect = 9e-19
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                       
Query: 124 gcacacacatnaaccagaatggctccgactcgaatactcagtcggagatntcgatggcct 183
           |||| ||||| ||||| | |||||| ||| ||||||||||| ||||||| | ||||||||
Sbjct: 103 gcacgcacatgaaccacactggctctgacccgaatactcagccggagatctggatggcct 44

                                          
Query: 184 tcacctcgggcttcttnacctcggncttggg 214
           |||||||||||||||| ||||||| ||||||
Sbjct: 43  tcacctcgggcttcttgacctcggccttggg 13
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>emb|X64618.1|TAHSP169B T.aestivum mRNA for heat shock protein 16.9B
          Length = 1070

 Score =  101 bits (51), Expect = 9e-19
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                       
Query: 124 gcacacacatnaaccagaatggctccgactcgaatactcagtcggagatntcgatggcct 183
           |||| ||||| ||||| | |||||| ||| ||||||||||| ||||||| | ||||||||
Sbjct: 523 gcacgcacatgaaccacactggctctgacccgaatactcagccggagatctggatggcct 464

                                          
Query: 184 tcacctcgggcttcttnacctcggncttggg 214
           |||||||||||||||| ||||||| ||||||
Sbjct: 463 tcacctcgggcttcttgacctcggccttggg 433
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>gb|L37075.1|WHTHSP169Q Triticum aestivum clone 5LC1 heat shock protein 16.9 (hsp16.9-5LC1)
           mRNA, partial cds
          Length = 245

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 79/91 (86%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                       
Query: 124 gcacacacatnaaccagaatggctccgactcgaatactcagtcggagatntcgatggcct 183
           |||| ||||| ||||| | |||||| ||| ||| ||||||| ||||||| | ||||||||
Sbjct: 102 gcacgcacatgaaccacactggctctgacccga-tactcagccggagatctggatggcct 44

                                          
Query: 184 tcacctcgggcttcttnacctcggncttggg 214
           |||||||||||||||| ||||||| ||||||
Sbjct: 43  tcacctcgggcttcttgacctcggccttggg 13
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>gb|L37070.1|WHTHSP169L Triticum aestivum clone 17LC3 heat shock protein 16.9
           (hsp16.9-17LC3) mRNA, partial cds
          Length = 440

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 159 actcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 68  actcagacggagatctcgatggccttcacctcgggcttcttgacctcggccttggg 13



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 67/79 (84%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 17  gcgattacacaagtacacaaacgaccgaggtaaagaaacgcgatacagagatgcctcaac 76
           ||||||||||||||||| ||||| |   || |||||||| | ||||||||||| ||| ||
Sbjct: 210 gcgattacacaagtacagaaacggcttggggaaagaaactcaatacagagatgtctc-ac 152

                              
Query: 77  cagactcgacaagaacaaa 95
            ||||||| ||||||||||
Sbjct: 151 tagactcggcaagaacaaa 133
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>gb|L37069.1|WHTHSP169K Triticum aestivum clone 17LC1 heat shock protein 16.9
           (hsp16.9-17LC1) mRNA, partial cds
          Length = 276

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 159 actcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 68  actcagacggagatctcgatggccttcacctcgggcttcttgacctcggccttggg 13



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 42/48 (87%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                           
Query: 48  aaagaaacgcgatacagagatgcctcaaccagactcgacaagaacaaa 95
           |||||||| | ||||||||||| ||| || ||||||| ||||||||||
Sbjct: 179 aaagaaactcaatacagagatgtctc-actagactcggcaagaacaaa 133
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>gb|L37068.1|WHTHSP169J Triticum aestivum clone 16LC3 heat shock protein 16.9
           (hsp16.9-16LC3) mRNA, partial cds
          Length = 260

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 159 actcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 68  actcagacggagatctcgatggccttcacctcgggcttcttgacctcggccttggg 13
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>gb|L14444.1|WHTHSP169C Triticum aestivum heat shock protein 16.9C (hsp16.9C) mRNA, 3' end
          Length = 1014

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 85/101 (84%), Gaps = 6/101 (5%)
 Strand = Plus / Minus

                                                                       
Query: 114 tgcagaactcgcacacacatnaaccagaatggctccgactcgaatactcagtcggagatn 173
           |||||| ||||||||||||| ||||| | |||||||      ||| ||||| ||||||| 
Sbjct: 434 tgcagacctcgcacacacatcaaccaaactggctcc------aatgctcagccggagatc 381

                                                    
Query: 174 tcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||||||| ||||||||||||||||| ||||||| ||||||
Sbjct: 380 tcgatggctttcacctcgggcttcttgacctcggccttggg 340
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>emb|X13431.1|TAHSPLW Wheat mRNA for putative low molecular weight heat shock protein
          Length = 741

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 161 tcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 531 tcagccggagatctcgatggccttcacctcgggcttcttgacctcggccttggg 478



 Score = 44.1 bits (22), Expect = 0.18
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 117 agaactcgcacacacatnaaccagaatggctcc 149
           ||||||||||||||||| ||||| | |||||||
Sbjct: 597 agaactcgcacacacatcaaccaaattggctcc 565
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>emb|X64560.1|HVHSP17A H.vulgare hsp17 gene for 17 kd heat shock protein
          Length = 1515

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 159  actcagtcggagatntcgatggccttcacctcgggcttcttnacctcgg 207
            |||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 1186 actcagccggagatctcgatggccttcacctcgggcttcttgacctcgg 1138
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>emb|Y07844.1|HV17HSP H.vulgare mRNA for 17 kDa class I small heat shock protein
          Length = 748

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 161 tcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           |||| ||||||| |||||||||||||||||||||||||| ||||| | ||||||
Sbjct: 522 tcagccggagatctcgatggccttcacctcgggcttcttgacctctgtcttggg 469
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>ref|XM_462738.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 754

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||| || ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 565 gagatctcaatggccttcacctcgggcttcttgacctcggccttggg 519
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 168     gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
               ||||| || ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 1951492 gagatctcaatggccttcacctcgggcttcttgacctcggccttggg 1951446



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                
Query: 166     cggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
               ||||||| || |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 1948010 cggagatctcaatggccttcacctcaggcttcttgacctcggccttggg 1948058



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 168     gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
               ||||| || ||||||||||||||||||||||| ||||| | ||||||
Sbjct: 1943480 gagatctcaatggccttcacctcgggcttcttgacctcagccttggg 1943526
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>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443D08
          Length = 146670

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 168   gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
             ||||| || ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 14070 gagatctcaatggccttcacctcgggcttcttgacctcggccttggg 14024



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 166   cggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
             ||||||| || |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 10588 cggagatctcaatggccttcacctcaggcttcttgacctcggccttggg 10636



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 168  gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
            ||||| || ||||||||||||||||||||||| ||||| | ||||||
Sbjct: 6058 gagatctcaatggccttcacctcgggcttcttgacctcagccttggg 6104
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>dbj|AK121025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A14, full
           insert sequence
          Length = 753

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||| || ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 564 gagatctcaatggccttcacctcgggcttcttgacctcggccttggg 518
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>gb|M80939.1|RICHSEB Oryza sativa 16.9 kDa heat shock protein gene, complete cds
          Length = 3349

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 168  gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
            ||||| || ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2197 gagatctcaatggccttcacctcgggcttcttgacctcggccttggg 2151
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>ref|XM_462737.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 166 cggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||||| || |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 448 cggagatctcaatggccttcacctcaggcttcttgacctcggccttggg 400
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>emb|X94191.1|PGHSP170 P.glaucum mRNA for heat shock protein, HSP 17.0
          Length = 719

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttgggnanggggaccgt 226
           ||||| || |||||||||||||||||||||||  |||||| |||||| | || ||||||
Sbjct: 550 gagatctcaatggccttcacctcgggcttcttctcctcggccttgggcacggtgaccgt 492
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>emb|X60820.1|OSLMWHSP O.sativa mRNA for 16.9 kD low molecular weight heat shock protein
          Length = 806

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 166 cggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||||| || |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 565 cggagatctcaatggccttcacctcaggcttcttgacctcggccttggg 517
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>gb|M80938.1|RICHSEA Oryza sativa 16.9 kDa heat shock protein gene, complete cds
          Length = 2504

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 166  cggagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
            ||||||| || |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 2240 cggagatctcaatggccttcacctcaggcttcttgacctcggccttggg 2192
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>gb|AY111665.1| Zea mays CL13719_1 mRNA sequence
          Length = 819

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 161 tcagtcggagatntcgatggccttcacctcgggcttcttnacctcggncttgggnanggg 220
           |||| ||||||| | ||||  |||||||||||||||||| ||||||| |||||| | || 
Sbjct: 256 tcagccggagatctggatgctcttcacctcgggcttcttgacctcggccttgggcacggt 315

                 
Query: 221 gaccgt 226
           ||||||
Sbjct: 316 gaccgt 321
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>ref|XM_462736.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 450

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||| || ||||||||||||||||||||||| ||||| | ||||||
Sbjct: 443 gagatctcaatggccttcacctcgggcttcttgacctcagccttggg 397
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>gb|AF007762.1| Agrostis stolonifera var. palustris heat shock protein 16.5
           (ApHSP16.5) mRNA, complete cds
          Length = 724

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||| ||||||||||||||||||||||| || ||||| | ||||||
Sbjct: 531 gagatctcgatggccttcacctcgggctttttgacctcagccttggg 485
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>emb|X94192.1|PGHSP169 P.glaucum mRNA for heat shock protein, HSP 16.9
          Length = 795

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 166 cggagatntcgatggccttcacctcgggcttcttnacctcggncttgggnanggggaccg 225
           ||||||| ||||||||||| ||||| ||||||||  |||| | |||||| | || |||||
Sbjct: 534 cggagatctcgatggccttgacctctggcttcttcccctctgccttgggcacggtgaccg 475

            
Query: 226 t 226
           |
Sbjct: 474 t 474
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>gb|U81385.1|OSU81385 Oryza sativa heat shock protein (Oshsp16.9C) gene, complete cds
          Length = 1811

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttggg 214
           ||||| || |||||||||||||||||||| || ||||| | ||||||
Sbjct: 965 gagatctcaatggccttcacctcgggcttattgacctcagccttggg 919
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>emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP 17.9
          Length = 807

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctc 205
           ||||| | ||||| |||||||||||||||||| |||||
Sbjct: 553 gagatctggatggacttcacctcgggcttcttgacctc 516
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>gb|AC091401.2| Sus scrofa clone RP44-198J22, complete sequence
          Length = 177559

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    agaacaaatcacaactgtattt 109
             ||||||||||||||||||||||
Sbjct: 75144 agaacaaatcacaactgtattt 75165
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>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence
          Length = 178150

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 86    caagaacaaatcacaactgtattta 110
             |||||| ||||||||||||||||||
Sbjct: 74897 caagaagaaatcacaactgtattta 74921
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>emb|BX465192.7| Zebrafish DNA sequence from clone CH211-202P4 in linkage group 12,
             complete sequence
          Length = 200890

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gaacaaatcacaactgtatt 108
             ||||||||||||||||||||
Sbjct: 10948 gaacaaatcacaactgtatt 10967
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>gb|AY109481.1| Zea mays CL2172_1 mRNA sequence
          Length = 740

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 48/59 (81%)
 Strand = Plus / Minus

                                                                      
Query: 168 gagatntcgatggccttcacctcgggcttcttnacctcggncttgggnanggggaccgt 226
           ||||| || || ||||||||||| ||||||||  |||| | |||||| | || ||||||
Sbjct: 530 gagatctcaatagccttcacctcaggcttcttctcctccgccttgggcacggtgaccgt 472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,002,341
Number of Sequences: 3902068
Number of extensions: 1002341
Number of successful extensions: 66768
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66674
Number of HSP's gapped (non-prelim): 87
length of query: 226
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 204
effective length of database: 17,147,199,772
effective search space: 3498028753488
effective search space used: 3498028753488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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