| Clone Name | rbags36g03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-F07, full insert sequence Length = 848 Score = 258 bits (130), Expect = 2e-65 Identities = 276/327 (84%) Strand = Plus / Minus Query: 160 ctacaatggggaaggggcctggcttttctccttgatggcctcctggacagacttcaggag 219 |||||| ||||||| |||||| ||| |||||||||||| || || |||| ||||||||| Sbjct: 605 ctacaacggggaagcagcctggttttgctccttgatggcatcttgcacagccttcaggag 546 Query: 220 tgatggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccc 279 ||| ||||||| |||||| || || || ||||| |||||||| | ||||||||||| ||| Sbjct: 545 tgaaggcatcagctgcttgttcgtcgcgatgatccctgtgtcgagatcaagaaatctccc 486 Query: 280 tttcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctgtgac 339 ||| |||||||| | |||||||||||| |||||||| || | |||||||| |||||| || Sbjct: 485 tttggagaaatccaaatcgtttcctgatgcatctgtcaccagacctccagcttctgtcac 426 Query: 340 gacaattgcaccagctgcatgatcccatatcttttccttataacccttgtgtggaaaacg 399 ||| |||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct: 425 gacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtggaaaacg 366 Query: 400 caagtaaatggcaccatcnccacggnccanancaccatattttgcttggctatctattct 459 ||||||||||||||| || || ||| | | |||| ||||||||||||||||| ||||| Sbjct: 365 caagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctatcaattct 306 Query: 460 gactggangagcttgnacaccaanttt 486 |||||| ||||||| ||||||| ||| Sbjct: 305 aactggaggagcttggacaccaagttt 279
>gb|U33283.1|OSU33283 Oryza sativa Ca2+ sensitive 3'(2'),5-diphosphonucleoside 3'(2') phosphohydrolase mRNA, complete cds Length = 1480 Score = 258 bits (130), Expect = 2e-65 Identities = 276/327 (84%) Strand = Plus / Minus Query: 160 ctacaatggggaaggggcctggcttttctccttgatggcctcctggacagacttcaggag 219 |||||| ||||||| |||||| ||| |||||||||||| || || |||| ||||||||| Sbjct: 1236 ctacaacggggaagcagcctggttttgctccttgatggcatcttgcacagccttcaggag 1177 Query: 220 tgatggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccc 279 ||| ||||||| |||||| || || || ||||| |||||||| | ||||||||||| ||| Sbjct: 1176 tgaaggcatcagctgcttgttcgtcgcgatgatccctgtgtcgagatcaagaaatctccc 1117 Query: 280 tttcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctgtgac 339 ||| |||||||| | |||||||||||| |||||||| || | |||||||| |||||| || Sbjct: 1116 tttggagaaatccaaatcgtttcctgatgcatctgtcaccagacctccagcttctgtcac 1057 Query: 340 gacaattgcaccagctgcatgatcccatatcttttccttataacccttgtgtggaaaacg 399 ||| |||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct: 1056 gacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtggaaaacg 997 Query: 400 caagtaaatggcaccatcnccacggnccanancaccatattttgcttggctatctattct 459 ||||||||||||||| || || ||| | | |||| ||||||||||||||||| ||||| Sbjct: 996 caagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctatcaattct 937 Query: 460 gactggangagcttgnacaccaanttt 486 |||||| ||||||| ||||||| ||| Sbjct: 936 aactggaggagcttggacaccaagttt 910
>gb|AY111987.1| Zea mays CL10219_1 mRNA sequence Length = 771 Score = 216 bits (109), Expect = 6e-53 Identities = 243/290 (83%) Strand = Plus / Plus Query: 197 gcctcctggacagacttcaggagtgatggcatcaactgcttatttgtggcaatgatgcct 256 ||||| ||||||| |||||||| || |||||||||| ||| || || || ||||||||| Sbjct: 389 gcctcttggacagctttcaggagcgacggcatcaactccttgttggttgcgatgatgcct 448 Query: 257 gtgtcaacatcaagaaatcgccctttcgagaaatcaagatcgtttcctgaggcatctgtt 316 ||||| | ||| ||||||| |||||| |||||||| | |||||||| | ||||||||| Sbjct: 449 gtgtcgagatcgagaaatctccctttggagaaatccaagtcgtttcccgcagcatctgtt 508 Query: 317 actacacctccagattctgtgacgacaattgcaccagctgcatgatcccatatcttttcc 376 |||| ||||||| |||||| |||||||||| || |||||||| |||||||| || || Sbjct: 509 actatgcctccagcttctgtcacgacaattgatcctgctgcatggtcccatattttctct 568 Query: 377 ttataacccttgtgtggaaaacgcaagtaaatggcaccatcnccacggnccanancacca 436 ||||||| ||||||||||| |||||||||||||| ||||| || ||| ||| | ||||| Sbjct: 569 ctataacctttgtgtggaaagcgcaagtaaatggcgccatcacctcgggccagagcacca 628 Query: 437 tattttgcttggctatctattctgactggangagcttgnacaccaanttt 486 |||||||||||||| || ||||| |||||| ||||||| ||||||| ||| Sbjct: 629 tattttgcttggctgtcgattctaactggaggagcttggacaccaagttt 678
>gb|AF288075.1|AF288075 Zea mays diphosphonucleotide phosphatase 1 mRNA, complete cds Length = 1453 Score = 200 bits (101), Expect = 3e-48 Identities = 241/290 (83%) Strand = Plus / Minus Query: 197 gcctcctggacagacttcaggagtgatggcatcaactgcttatttgtggcaatgatgcct 256 ||||| ||||||| |||||||| || |||||||||| ||| || || || ||||||||| Sbjct: 1137 gcctcttggacagctttcaggagcgacggcatcaactccttgttggttgcgatgatgcct 1078 Query: 257 gtgtcaacatcaagaaatcgccctttcgagaaatcaagatcgtttcctgaggcatctgtt 316 ||||| | ||| ||||||| |||||| |||||||| | || ||||| | ||||||||| Sbjct: 1077 gtgtcgagatccagaaatctccctttggagaaatccaagtcctttcccgcagcatctgtt 1018 Query: 317 actacacctccagattctgtgacgacaattgcaccagctgcatgatcccatatcttttcc 376 |||| ||||||| |||||| |||||||||| || ||||||| |||||||| || || Sbjct: 1017 actatgcctccagcttctgtcacgacaattgatcctcctgcatggtcccatattttctct 958 Query: 377 ttataacccttgtgtggaaaacgcaagtaaatggcaccatcnccacggnccanancacca 436 ||||||| ||||||||||| |||||||||||||| ||||| || ||| ||| | ||||| Sbjct: 957 ctataacctttgtgtggaaagcgcaagtaaatggcgccatcacctcgggccagagcacca 898 Query: 437 tattttgcttggctatctattctgactggangagcttgnacaccaanttt 486 |||||||||||||| || ||||| |||||| ||||||| ||||||| ||| Sbjct: 897 tattttgcttggctgtcgattctaactggaggagcttggacaccaagttt 848
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 135 bits (68), Expect = 2e-28 Identities = 149/176 (84%) Strand = Plus / Plus Query: 160 ctacaatggggaaggggcctggcttttctccttgatggcctcctggacagacttcaggag 219 |||||| ||||||| |||||| ||| |||||||||||| || || |||| ||||||||| Sbjct: 4215833 ctacaacggggaagcagcctggttttgctccttgatggcatcttgcacagccttcaggag 4215892 Query: 220 tgatggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccc 279 ||| ||||||| |||||| || || || ||||| |||||||| | ||||||||||| ||| Sbjct: 4215893 tgaaggcatcagctgcttgttcgtcgcgatgatccctgtgtcgagatcaagaaatctccc 4215952 Query: 280 tttcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 ||| |||||||| | |||||||||||| |||||||| || | |||||||| ||||| Sbjct: 4215953 tttggagaaatccaaatcgtttcctgatgcatctgtcaccagacctccagcttctg 4216008 Score = 129 bits (65), Expect = 1e-26 Identities = 130/154 (84%) Strand = Plus / Plus Query: 333 ctgtgacgacaattgcaccagctgcatgatcccatatcttttccttataacccttgtgtg 392 |||| ||||| |||| ||||||||||||||||| ||||| || | ||||| ||||||| Sbjct: 4216168 ctgtcacgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtg 4216227 Query: 393 gaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgcttggctat 452 |||||||||||||||||||||| || || ||| | | |||| |||||||||||||||| Sbjct: 4216228 gaaaacgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctat 4216287 Query: 453 ctattctgactggangagcttgnacaccaanttt 486 | ||||| |||||| ||||||| ||||||| ||| Sbjct: 4216288 caattctaactggaggagcttggacaccaagttt 4216321 Score = 79.8 bits (40), Expect = 8e-12 Identities = 84/101 (83%) Strand = Plus / Plus Query: 386 ttgtgtggaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgct 445 ||||||||||| ||| | |||||||| ||||| || || | | | |||||||||||||| Sbjct: 4212529 ttgtgtggaaatcgccaataaatggcgccatcaccttgggctacagcaccatattttgct 4212588 Query: 446 tggctatctattctgactggangagcttgnacaccaanttt 486 |||||||| ||||| |||||| ||||||| | ||||| ||| Sbjct: 4212589 tggctatcaattctaactggaggagcttgaataccaagttt 4212629 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 222 atggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccctt 281 |||||||||| | |||||||| ||||| ||||| | ||| ||||||| ||| |||| Sbjct: 4212259 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 4212318 Query: 282 tcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 | |||||||| | |||||||||||| |||||| |||| | |||||||| ||||| Sbjct: 4212319 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttctg 4212372
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 135 bits (68), Expect = 2e-28 Identities = 149/176 (84%) Strand = Plus / Plus Query: 160 ctacaatggggaaggggcctggcttttctccttgatggcctcctggacagacttcaggag 219 |||||| ||||||| |||||| ||| |||||||||||| || || |||| ||||||||| Sbjct: 4215820 ctacaacggggaagcagcctggttttgctccttgatggcatcttgcacagccttcaggag 4215879 Query: 220 tgatggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccc 279 ||| ||||||| |||||| || || || ||||| |||||||| | ||||||||||| ||| Sbjct: 4215880 tgaaggcatcagctgcttgttcgtcgcgatgatccctgtgtcgagatcaagaaatctccc 4215939 Query: 280 tttcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 ||| |||||||| | |||||||||||| |||||||| || | |||||||| ||||| Sbjct: 4215940 tttggagaaatccaaatcgtttcctgatgcatctgtcaccagacctccagcttctg 4215995 Score = 129 bits (65), Expect = 1e-26 Identities = 130/154 (84%) Strand = Plus / Plus Query: 333 ctgtgacgacaattgcaccagctgcatgatcccatatcttttccttataacccttgtgtg 392 |||| ||||| |||| ||||||||||||||||| ||||| || | ||||| ||||||| Sbjct: 4216155 ctgtcacgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtg 4216214 Query: 393 gaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgcttggctat 452 |||||||||||||||||||||| || || ||| | | |||| |||||||||||||||| Sbjct: 4216215 gaaaacgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctat 4216274 Query: 453 ctattctgactggangagcttgnacaccaanttt 486 | ||||| |||||| ||||||| ||||||| ||| Sbjct: 4216275 caattctaactggaggagcttggacaccaagttt 4216308 Score = 79.8 bits (40), Expect = 8e-12 Identities = 84/101 (83%) Strand = Plus / Plus Query: 386 ttgtgtggaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgct 445 ||||||||||| ||| | |||||||| ||||| || || | | | |||||||||||||| Sbjct: 4212516 ttgtgtggaaatcgccaataaatggcgccatcaccttgggctacagcaccatattttgct 4212575 Query: 446 tggctatctattctgactggangagcttgnacaccaanttt 486 |||||||| ||||| |||||| ||||||| | ||||| ||| Sbjct: 4212576 tggctatcaattctaactggaggagcttgaataccaagttt 4212616 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 222 atggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccctt 281 |||||||||| | |||||||| ||||| ||||| | ||| ||||||| ||| |||| Sbjct: 4212246 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 4212305 Query: 282 tcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 | |||||||| | |||||||||||| |||||| |||| | |||||||| ||||| Sbjct: 4212306 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttctg 4212359
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 135 bits (68), Expect = 2e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 160 ctacaatggggaaggggcctggcttttctccttgatggcctcctggacagacttcaggag 219 |||||| ||||||| |||||| ||| |||||||||||| || || |||| ||||||||| Sbjct: 67950 ctacaacggggaagcagcctggttttgctccttgatggcatcttgcacagccttcaggag 67891 Query: 220 tgatggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccc 279 ||| ||||||| |||||| || || || ||||| |||||||| | ||||||||||| ||| Sbjct: 67890 tgaaggcatcagctgcttgttcgtcgcgatgatccctgtgtcgagatcaagaaatctccc 67831 Query: 280 tttcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 ||| |||||||| | |||||||||||| |||||||| || | |||||||| ||||| Sbjct: 67830 tttggagaaatccaaatcgtttcctgatgcatctgtcaccagacctccagcttctg 67775 Score = 129 bits (65), Expect = 1e-26 Identities = 130/154 (84%) Strand = Plus / Minus Query: 333 ctgtgacgacaattgcaccagctgcatgatcccatatcttttccttataacccttgtgtg 392 |||| ||||| |||| ||||||||||||||||| ||||| || | ||||| ||||||| Sbjct: 67615 ctgtcacgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtg 67556 Query: 393 gaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgcttggctat 452 |||||||||||||||||||||| || || ||| | | |||| |||||||||||||||| Sbjct: 67555 gaaaacgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctat 67496 Query: 453 ctattctgactggangagcttgnacaccaanttt 486 | ||||| |||||| ||||||| ||||||| ||| Sbjct: 67495 caattctaactggaggagcttggacaccaagttt 67462 Score = 79.8 bits (40), Expect = 8e-12 Identities = 84/101 (83%) Strand = Plus / Minus Query: 386 ttgtgtggaaaacgcaagtaaatggcaccatcnccacggnccanancaccatattttgct 445 ||||||||||| ||| | |||||||| ||||| || || | | | |||||||||||||| Sbjct: 71254 ttgtgtggaaatcgccaataaatggcgccatcaccttgggctacagcaccatattttgct 71195 Query: 446 tggctatctattctgactggangagcttgnacaccaanttt 486 |||||||| ||||| |||||| ||||||| | ||||| ||| Sbjct: 71194 tggctatcaattctaactggaggagcttgaataccaagttt 71154 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 222 atggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaagaaatcgccctt 281 |||||||||| | |||||||| ||||| ||||| | ||| ||||||| ||| |||| Sbjct: 71524 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 71465 Query: 282 tcgagaaatcaagatcgtttcctgaggcatctgttactacacctccagattctg 335 | |||||||| | |||||||||||| |||||| |||| | |||||||| ||||| Sbjct: 71464 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttctg 71411
>gb|AY110005.1| Zea mays CL14808_1 mRNA sequence Length = 1272 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/55 (87%) Strand = Plus / Plus Query: 432 caccatattttgcttggctatctattctgactggangagcttgnacaccaanttt 486 |||||||||||||||||||||| ||||| || ||| ||||| | ||||||| ||| Sbjct: 459 caccatattttgcttggctatccattctaacaggaggagctcggacaccaagttt 513 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 295 atcgtttcctgaggcatctgttactacacctccagattctgtgacgacaattgcaccagc 354 ||||||||||| ||||||| |||| | || |||| ||||||||| | ||||| ||||| Sbjct: 322 atcgtttcctgcggcatcttttaccatgccaccagcttctgtgacaataattgatccagc 381 Query: 355 tgcatgatccca 366 |||||||||||| Sbjct: 382 tgcatgatccca 393
>emb|AJ310755.1|GHI310755 Gossypium hirsutum partial mRNA for 3'(2'),5'-bisphosphate nucleotidase (f1 gene) Length = 990 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 222 atggcatcaactgcttatttgtggcaatgatgcctgtgtcaacatcaaga 271 |||||||||||| || || ||| |||||||||||||||| | ||||||| Sbjct: 600 atggcatcaacttctggttggtgacaatgatgcctgtgtccagatcaaga 551 Score = 44.1 bits (22), Expect = 0.46 Identities = 87/110 (79%) Strand = Plus / Minus Query: 350 ccagctgcatgatcccatatcttttccttataacccttgtgtggaaaacgcaagtaaatg 409 ||||| |||||||||||||| ||||| ||| || |||||||||| ||||| || ||| Sbjct: 475 ccagcagcatgatcccatattttttctcgataccctttgtgtggaagacgcagatatatg 416 Query: 410 gcaccatcnccacggnccanancaccatattttgcttggctatctattct 459 || ||||| || | | | | ||||||| ||||| |||||||| ||||| Sbjct: 415 gctccatctcctctggatagagcaccatactttgcctggctatcaattct 366
>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20, complete sequence Length = 202340 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 taaacagtgtgaataaggtgtg 96 |||||||||||||||||||||| Sbjct: 152618 taaacagtgtgaataaggtgtg 152639
>ref|XM_468288.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 ccagctgcatgatcccatatcttttcctt 378 ||||| ||||||||||||||||| ||||| Sbjct: 1254 ccagcggcatgatcccatatcttctcctt 1226
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ctggacagacttcaggagtga 222 ||||||||||||||||||||| Sbjct: 376744 ctggacagacttcaggagtga 376724
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 ccagctgcatgatcccatatcttttcctt 378 ||||| ||||||||||||||||| ||||| Sbjct: 123350 ccagcggcatgatcccatatcttctcctt 123322
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 ccagctgcatgatcccatatcttttcctt 378 ||||| ||||||||||||||||| ||||| Sbjct: 34381756 ccagcggcatgatcccatatcttctcctt 34381784
>gb|AC073874.4| Homo sapiens BAC clone RP11-586M15 from 2, complete sequence Length = 18461 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tacacataaacagtgtgaata 89 ||||||||||||||||||||| Sbjct: 15207 tacacataaacagtgtgaata 15227
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 ccagctgcatgatcccatatcttttcctt 378 ||||| ||||||||||||||||| ||||| Sbjct: 79403 ccagcggcatgatcccatatcttctcctt 79431
>dbj|AK065057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J07, full insert sequence Length = 1893 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 ccagctgcatgatcccatatcttttcctt 378 ||||| ||||||||||||||||| ||||| Sbjct: 1254 ccagcggcatgatcccatatcttctcctt 1226
>emb|AL162872.4|CNS01RI5 Human chromosome 14 DNA sequence BAC R-764E10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173106 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tgatcccatatcttttcctta 379 ||||||||||||||||||||| Sbjct: 111865 tgatcccatatcttttcctta 111885
>dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1133J7, complete sequences Length = 168406 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 cttggctatctattctgactg 464 ||||||||||||||||||||| Sbjct: 163222 cttggctatctattctgactg 163202
>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete sequences Length = 179680 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 cttggctatctattctgactg 464 ||||||||||||||||||||| Sbjct: 8411 cttggctatctattctgactg 8391
>ref|XM_534124.2| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 1 (LOC476921), mRNA Length = 3110 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tgtgtcaacatcaagaaatc 275 |||||||||||||||||||| Sbjct: 2579 tgtgtcaacatcaagaaatc 2560
>ref|XM_843311.1| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 2 (LOC476921), mRNA Length = 3116 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tgtgtcaacatcaagaaatc 275 |||||||||||||||||||| Sbjct: 2585 tgtgtcaacatcaagaaatc 2566
>emb|AL357059.13| Human DNA sequence from clone RP11-153G5 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 74127 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 tcccatatcttttccttata 381 |||||||||||||||||||| Sbjct: 14038 tcccatatcttttccttata 14057
>emb|AL138900.12| Human DNA sequence from clone RP11-85G21 on chromosome 1 Contains a novel gene, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aacagtgtgaataaggtgtg 96 |||||||||||||||||||| Sbjct: 24291 aacagtgtgaataaggtgtg 24272
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcatgatcccatatctttt 374 |||||||||||||||||||| Sbjct: 87439 tgcatgatcccatatctttt 87458
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tggcaatgatgcctgtgtca 262 |||||||||||||||||||| Sbjct: 5073 tggcaatgatgcctgtgtca 5092
>gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177245 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttcaagccaaaataacttct 161 |||||||||||||||||||| Sbjct: 123424 ttcaagccaaaataacttct 123405
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccatattttgcttggctatcta 455 |||||||||||||||| ||||||| Sbjct: 151912 caccatattttgcttgcctatcta 151935
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 aaacggggaaggttcaagcc 149 |||||||||||||||||||| Sbjct: 35347 aaacggggaaggttcaagcc 35328
>gb|AC158371.2| Pan troglodytes BAC clone CH251-423C22 from chromosome unknown, complete sequence Length = 154709 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 attgcatttgtccaaacaaa 59 |||||||||||||||||||| Sbjct: 145615 attgcatttgtccaaacaaa 145634
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tggcaatgatgcctgtgtca 262 |||||||||||||||||||| Sbjct: 202694 tggcaatgatgcctgtgtca 202713
>emb|AL445886.3|CNS07EET Human chromosome 14 DNA sequence BAC R-369B6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attgcatttgtccaaacaaa 59 |||||||||||||||||||| Sbjct: 102149 attgcatttgtccaaacaaa 102130
>gb|AC170421.7| Rhesus Macaque 14 BAC CH250-340G19 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 169902 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 attgcatttgtccaaacaaa 59 |||||||||||||||||||| Sbjct: 77297 attgcatttgtccaaacaaa 77316
>emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-533L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162986 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attgcatttgtccaaacaaa 59 |||||||||||||||||||| Sbjct: 145954 attgcatttgtccaaacaaa 145935 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,173,017 Number of Sequences: 3902068 Number of extensions: 4173017 Number of successful extensions: 72364 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72203 Number of HSP's gapped (non-prelim): 159 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)