| Clone Name | rbags36f15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR674499.2|CNS0FJEX Tetraodon nigroviridis full-length cDNA Length = 642 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 aacatcgtcatgtagaacaccagg 65 |||||||||||| ||||||||||| Sbjct: 317 aacatcgtcatggagaacaccagg 340
>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aacaccagggccatagcctt 76 |||||||||||||||||||| Sbjct: 68355 aacaccagggccatagcctt 68336
>ref|XM_506948.1| PREDICTED Oryza sativa (japonica cultivar-group), P0685G12.41 mRNA Length = 1611 Score = 38.2 bits (19), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 40 ataacatcgtcatgtagaacaccaggg 66 ||||||||||||||| ||||| ||||| Sbjct: 1562 ataacatcgtcatgtcgaacagcaggg 1536
>gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome 6, complete sequence Length = 161366 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 caaatgtttcaggaacatc 19 ||||||||||||||||||| Sbjct: 82548 caaatgtttcaggaacatc 82566
>emb|AL390252.9| Human DNA sequence from clone RP11-297O4 on chromosome 1 Contains the CELSR2 gene for cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila), the gene for differential display and activated by p53 (DDA3), the gene for novel protein similar to Myosin-binding protein H (MyBP-H) (H-protein) (LOC343263), the SORT1 gene for sortilin 1 and the 3' end of the PSMA5 gene for proteasome (prosome, macropain) subunit, alpha type, 5, complete sequence Length = 169241 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 atgtagaacaccagggcca 69 ||||||||||||||||||| Sbjct: 20649 atgtagaacaccagggcca 20631
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 40 ataacatcgtcatgtagaacaccaggg 66 ||||||||||||||| ||||| ||||| Sbjct: 30158295 ataacatcgtcatgtcgaacagcaggg 30158321
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 38.2 bits (19), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 40 ataacatcgtcatgtagaacaccaggg 66 ||||||||||||||| ||||| ||||| Sbjct: 137892 ataacatcgtcatgtcgaacagcaggg 137918
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 38.2 bits (19), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 40 ataacatcgtcatgtagaacaccaggg 66 ||||||||||||||| ||||| ||||| Sbjct: 30999 ataacatcgtcatgtcgaacagcaggg 31025
>dbj|AK071759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109C03, full insert sequence Length = 1611 Score = 38.2 bits (19), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 40 ataacatcgtcatgtagaacaccaggg 66 ||||||||||||||| ||||| ||||| Sbjct: 1562 ataacatcgtcatgtcgaacagcaggg 1536
>gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome 6, complete sequence Length = 270621 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 caaatgtttcaggaacatc 19 ||||||||||||||||||| Sbjct: 65771 caaatgtttcaggaacatc 65789
>emb|AL928652.10| Mouse DNA sequence from clone RP23-300G1 on chromosome 4, complete sequence Length = 37820 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 ccagggccatagccttgct 79 ||||||||||||||||||| Sbjct: 4497 ccagggccatagccttgct 4479
>dbj|AB065955.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_518 Length = 24370 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 atgtagaacaccagggcca 69 ||||||||||||||||||| Sbjct: 17520 atgtagaacaccagggcca 17502 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 580,098 Number of Sequences: 3902068 Number of extensions: 580098 Number of successful extensions: 49984 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49954 Number of HSP's gapped (non-prelim): 30 length of query: 102 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 81 effective length of database: 17,151,101,840 effective search space: 1389239249040 effective search space used: 1389239249040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)