ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags35p24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596574.1| Saccharum officinarum clone SCCCLR1072A04, complete sequence Length = 2198 Score = 190 bits (96), Expect = 4e-45 Identities = 287/350 (82%), Gaps = 3/350 (0%) Strand = Plus / Plus Query: 269 tcagcgccgtacacaaactgcctttcgtaagg---gtatgggtgcctctctggtgttgcc 325 ||||| || |||||||||||||| |||||||| | | || ||||||||||| || | Sbjct: 344 tcagcaccatacacaaactgcctctcgtaaggattggagggatgcctctctgggtttact 403 Query: 326 tggtagaagctcttctcggggaagctggtgacacggggtgcatagagcgacccgttggca 385 ||||||||||||| || | |||| || ||||| ||||| || ||| || |||||| Sbjct: 404 gggtagaagctcttgtcagcaaagcctgtagcacggtgtgcaaaggccgatccattggca 463 Query: 386 cgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgccttagcc 445 || |||| ||||||||||||||| || ||||||||||||||||||||||| ||||| || Sbjct: 464 cgaggccgcttggactgtggctttgctgcttcaacagccctcctcttgtctgcctttgct 523 Query: 446 ttctccaactgaatcacccttttctggagtggatccacgggatattgctcctccagtttg 505 ||||| | ||| | ||||||||||| ||||||||||| || || |||||||| |||||| Sbjct: 524 ttctctagctgcaaaacccttttctgtagtggatccacagggtactgctcctcaagtttg 583 Query: 506 tgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattcatctca 565 ||||| || ||||| || ||||||| ||||||||||| || |||||| |||||||||||| Sbjct: 584 tgctcttcaatgcatttaatgacagatttcagtgcagccaactcacgttcattcatctca 643 Query: 566 ttctgtgctccgggagacatttttccgttcttgccatgtgacaccttctt 615 |||||||| || ||||| | ||| | ||| || |||||||||| ||||| Sbjct: 644 ttctgtgccccaggagaaactttgacattcctggcatgtgacactttctt 693 Score = 77.8 bits (39), Expect = 4e-11 Identities = 141/167 (84%), Gaps = 11/167 (6%) Strand = Plus / Plus Query: 37 ccaactattttcagctaggcaaactagctaga-tgactgatacaactacaacaacag-ca 94 |||||||||| ||||||||||||||||| ||| | |||||||| ||||||||||| | || Sbjct: 122 ccaactatttccagctaggcaaactagc-agagtaactgatacgactacaacaacgggca 180 Query: 95 gaaggttaaaagctagggatagttaggaaagagcccatgcactttgtagctctcccccat 154 | ||||||| ||||| |||||||||||||||| | ||||| | | | ||||| || Sbjct: 181 gcaggttaa--gctag--atagttaggaaagagcacctgcacctggctg-tctcc---at 232 Query: 155 tagtggatataaggcacctggtactgcaccgggtagccattaccgta 201 ||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 233 tagtggatatacgggacctggtactgaactgggtagccattaccgta 279
>gb|AY109393.1| Zea mays CL6746_2 mRNA sequence Length = 2069 Score = 188 bits (95), Expect = 1e-44 Identities = 262/317 (82%), Gaps = 3/317 (0%) Strand = Plus / Minus Query: 269 tcagcgccgtacacaaactgcctttcgtaagggt---atgggtgcctctctggtgttgcc 325 |||||||| |||||||||||||| ||| |||| | |||| ||||||||||| ||||| Sbjct: 1683 tcagcgccatacacaaactgcctctcgcaaggattgaatggatgcctctctggggttgct 1624 Query: 326 tggtagaagctcttctcggggaagctggtgacacggggtgcatagagcgacccgttggca 385 |||||||||||| || | |||| || |||||| |||| || ||| || |||||| Sbjct: 1623 gagtagaagctcttgtcagcaaagcctgtagcacgggttgcaaaggccgatccattggca 1564 Query: 386 cgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgccttagcc 445 || |||||||||||||| ||||| || |||||||||||| |||||||| | ||||| || Sbjct: 1563 cgaggcctcttggactgcggctttgctgcttcaacagccatcctcttggctgcctttgct 1504 Query: 446 ttctccaactgaatcacccttttctggagtggatccacgggatattgctcctccagtttg 505 ||||| | ||| | ||||||||||| ||||||||||| || || |||| ||| |||||| Sbjct: 1503 ttctctagctgcaaaacccttttctgaagtggatccacagggtactgctgctcaagtttg 1444 Query: 506 tgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattcatctca 565 ||||| || |||||||| ||||||| |||||| ||||| | |||||| |||||||||||| Sbjct: 1443 tgctcttcaatgcacttaatgacagatttcagcgcagataactcacgttcattcatctca 1384 Query: 566 ttctgtgctccgggaga 582 ||||||||||| ||||| Sbjct: 1383 ttctgtgctccaggaga 1367 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgta 201 ||||||||||||||| || ||||||||||| || ||||||||||||||||| Sbjct: 1798 ccattagtggatatacgggacctggtactgaactgggtagccattaccgta 1748 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 37 ccaactattttcagctaggcaaactagc 64 |||||||||| || |||||||||||||| Sbjct: 1905 ccaactatttccatctaggcaaactagc 1878
>ref|XM_450265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2019 Score = 159 bits (80), Expect = 1e-35 Identities = 194/232 (83%) Strand = Plus / Minus Query: 377 ccgttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtcc 436 ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 1554 ccgttggcacgaggcctcttagactgtggctttccagcttcaacagccctcctcttgtct 1495 Query: 437 gccttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcc 496 ||||| || ||||| | ||| || || ||| |||| ||||| || | ||||||| ||| Sbjct: 1494 gccttggctttctctagctggatgactcttctctgaagtgggtcgataggatatttctca 1435 Query: 497 tccagtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctca 556 || |||||||||||||| || || ||||| |||||||||| ||||||| ||| || ||| Sbjct: 1434 tcaagtttgtgctcctcaatacatttgataacagctttcaaggcagacaactcgcgttca 1375 Query: 557 ttcatctcattctgtgctccgggagacatttttccgttcttgccatgtgaca 608 || || ||||||||| |||| |||||||| |||||| ||||| ||||||||| Sbjct: 1374 ttaatttcattctgtactcccggagacatctttccggtcttgacatgtgaca 1323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 123/153 (80%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| | || Sbjct: 1783 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 1724 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||| ||| |||||||| | ||||||| || ||||| || ||||| || Sbjct: 1723 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 1664 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || || ||| ||||||| ||||||||||| Sbjct: 1663 agcaccatatacatactgcctctcgtaagggta 1631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 39 aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 97 ||||| ||||||||||||| |||||||| || |||||||||||||||| | || || | Sbjct: 1886 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 1827 Query: 98 ggttaaaagcta 109 |||||||||||| Sbjct: 1826 ggttaaaagcta 1815
>dbj|AK099919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116K21, full insert sequence Length = 2019 Score = 159 bits (80), Expect = 1e-35 Identities = 194/232 (83%) Strand = Plus / Minus Query: 377 ccgttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtcc 436 ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 1554 ccgttggcacgaggcctcttagactgtggctttccagcttcaacagccctcctcttgtct 1495 Query: 437 gccttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcc 496 ||||| || ||||| | ||| || || ||| |||| ||||| || | ||||||| ||| Sbjct: 1494 gccttggctttctctagctggatgactcttctctgaagtgggtcgataggatatttctca 1435 Query: 497 tccagtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctca 556 || |||||||||||||| || || ||||| |||||||||| ||||||| ||| || ||| Sbjct: 1434 tcaagtttgtgctcctcaatacatttgataacagctttcaaggcagacaactcgcgttca 1375 Query: 557 ttcatctcattctgtgctccgggagacatttttccgttcttgccatgtgaca 608 || || ||||||||| |||| |||||||| |||||| ||||| ||||||||| Sbjct: 1374 ttaatttcattctgtactcccggagacatctttccggtcttgacatgtgaca 1323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 123/153 (80%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| | || Sbjct: 1783 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 1724 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||| ||| |||||||| | ||||||| || ||||| || ||||| || Sbjct: 1723 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 1664 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || || ||| ||||||| ||||||||||| Sbjct: 1663 agcaccatatacatactgcctctcgtaagggta 1631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 39 aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 97 ||||| ||||||||||||| |||||||| || |||||||||||||||| | || || | Sbjct: 1886 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 1827 Query: 98 ggttaaaagcta 109 |||||||||||| Sbjct: 1826 ggttaaaagcta 1815
>ref|XM_450263.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2132 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1601 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 1542 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 1541 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 1482 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 1481 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 1422 Query: 560 atctcattctgt 571 || ||||||||| Sbjct: 1421 atttcattctgt 1410 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 243 ttatcatcgtagggtggtggtgggcttcagcgccgtacacaaactgcctttcgtaagggt 302 ||||||| || || ||||| ||||| ||||| || |||||| ||||||| |||||||||| Sbjct: 1738 ttatcattgtgggatggtgatgggcctcagcaccatacacatactgcctctcgtaagggt 1679 Query: 303 a 303 | Sbjct: 1678 a 1678
>ref|XM_450264.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2179 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1625 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 1566 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 1565 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 1506 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 1505 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 1446 Query: 560 atctcattctgt 571 || ||||||||| Sbjct: 1445 atttcattctgt 1434 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 1854 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1795 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 1794 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 1735 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 1734 agcaccatacacatactgcctctcgtaagggta 1702
>dbj|AK107545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-A02, full insert sequence Length = 2131 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1600 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 1541 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 1540 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 1481 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 1480 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 1421 Query: 560 atctcattctgt 571 || ||||||||| Sbjct: 1420 atttcattctgt 1409 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 243 ttatcatcgtagggtggtggtgggcttcagcgccgtacacaaactgcctttcgtaagggt 302 ||||||| || || ||||| ||||| ||||| || |||||| ||||||| |||||||||| Sbjct: 1737 ttatcattgtgggatggtgatgggcctcagcaccatacacatactgcctctcgtaagggt 1678 Query: 303 a 303 | Sbjct: 1677 a 1677
>dbj|AK103826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147L19, full insert sequence Length = 2179 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1625 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 1566 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 1565 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 1506 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 1505 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 1446 Query: 560 atctcattctgt 571 || ||||||||| Sbjct: 1445 atttcattctgt 1434 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 1854 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1795 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 1794 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 1735 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 1734 agcaccatacacatactgcctctcgtaagggta 1702
>dbj|AK060788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D08, full insert sequence Length = 1325 Score = 143 bits (72), Expect = 8e-31 Identities = 162/192 (84%) Strand = Plus / Minus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 856 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 797 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 796 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 737 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 736 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 677 Query: 560 atctcattctgt 571 || ||||||||| Sbjct: 676 atttcattctgt 665 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Minus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 1085 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1026 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 1025 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 966 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 965 agcaccatacacatactgcctctcgtaagggta 933
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 3606770 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 3606829 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 3606830 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 3606889 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 3606890 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 3606949 Query: 560 atctcattctg 570 || |||||||| Sbjct: 3606950 atttcattctg 3606960 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 377 ccgttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtcc 436 ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 3616324 ccgttggcacgaggcctcttagactgtggctttccagcttcaacagccctcctcttgtct 3616383 Query: 437 gccttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcc 496 ||||| || ||||| | ||| || || ||| |||| ||||| || | ||||||| ||| Sbjct: 3616384 gccttggctttctctagctggatgactcttctctgaagtgggtcgataggatatttctca 3616443 Query: 497 tccagtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctca 556 || |||||||||||||| || || ||||| |||||||||| ||||||| ||| || ||| Sbjct: 3616444 tcaagtttgtgctcctcaatacatttgataacagctttcaaggcagacaactcgcgttca 3616503 Query: 557 ttcatctcattctg 570 || || |||||||| Sbjct: 3616504 ttaatttcattctg 3616517 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 3606541 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 3606600 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 3606601 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 3606660 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 3606661 agcaccatacacatactgcctctcgtaagggta 3606693 Score = 65.9 bits (33), Expect = 1e-07 Identities = 123/153 (80%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| | || Sbjct: 3616095 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 3616154 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||| ||| |||||||| | ||||||| || ||||| || ||||| || Sbjct: 3616155 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 3616214 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || || ||| ||||||| ||||||||||| Sbjct: 3616215 agcaccatatacatactgcctctcgtaagggta 3616247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 39 aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 97 ||||| ||||||||||||| |||||||| || |||||||||||||||| | || || | Sbjct: 3615992 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 3616051 Query: 98 ggttaaaagcta 109 |||||||||||| Sbjct: 3616052 ggttaaaagcta 3616063 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tgatacaactacaacaacagcagaa 97 |||||||| |||||||||||||||| Sbjct: 14480626 tgatacaagtacaacaacagcagaa 14480602
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 92545 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 92604 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 92605 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 92664 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 92665 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 92724 Query: 560 atctcattctg 570 || |||||||| Sbjct: 92725 atttcattctg 92735 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 377 ccgttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtcc 436 ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 102099 ccgttggcacgaggcctcttagactgtggctttccagcttcaacagccctcctcttgtct 102158 Query: 437 gccttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcc 496 ||||| || ||||| | ||| || || ||| |||| ||||| || | ||||||| ||| Sbjct: 102159 gccttggctttctctagctggatgactcttctctgaagtgggtcgataggatatttctca 102218 Query: 497 tccagtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctca 556 || |||||||||||||| || || ||||| |||||||||| ||||||| ||| || ||| Sbjct: 102219 tcaagtttgtgctcctcaatacatttgataacagctttcaaggcagacaactcgcgttca 102278 Query: 557 ttcatctcattctg 570 || || |||||||| Sbjct: 102279 ttaatttcattctg 102292 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 92316 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 92375 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 92376 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 92435 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 92436 agcaccatacacatactgcctctcgtaagggta 92468 Score = 65.9 bits (33), Expect = 1e-07 Identities = 123/153 (80%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| | || Sbjct: 101870 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 101929 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||| ||| |||||||| | ||||||| || ||||| || ||||| || Sbjct: 101930 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 101989 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || || ||| ||||||| ||||||||||| Sbjct: 101990 agcaccatatacatactgcctctcgtaagggta 102022 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 39 aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 97 ||||| ||||||||||||| |||||||| || |||||||||||||||| | || || | Sbjct: 101767 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 101826 Query: 98 ggttaaaagcta 109 |||||||||||| Sbjct: 101827 ggttaaaagcta 101838
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 380 ttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtccgcc 439 |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 15031 ttggcacgaggcctcttagactgtggctttgcagcttcaacagccctcctcttgtctgcc 15090 Query: 440 ttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcctcc 499 ||||| ||||| | ||| || || |||||||| || | || | ||||||| ||| || Sbjct: 15091 ttagctttctctagctggataactcttttctgaagcaggtcaatcggatatttctcatca 15150 Query: 500 agtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctcattc 559 ||||||||||||||||| ||||| || ||||||||| ||||||||||| || |||||| Sbjct: 15151 agtttgtgctcctcgatacacttaatagcagctttcaaggcagacagctctcgttcattc 15210 Query: 560 atctcattctg 570 || |||||||| Sbjct: 15211 atttcattctg 15221 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 377 ccgttggcacgcggcctcttggactgtggcttggcggcttcaacagccctcctcttgtcc 436 ||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 24585 ccgttggcacgaggcctcttagactgtggctttccagcttcaacagccctcctcttgtct 24644 Query: 437 gccttagccttctccaactgaatcacccttttctggagtggatccacgggatattgctcc 496 ||||| || ||||| | ||| || || ||| |||| ||||| || | ||||||| ||| Sbjct: 24645 gccttggctttctctagctggatgactcttctctgaagtgggtcgataggatatttctca 24704 Query: 497 tccagtttgtgctcctcgatgcacttgatgacagctttcagtgcagacagctcacgctca 556 || |||||||||||||| || || ||||| |||||||||| ||||||| ||| || ||| Sbjct: 24705 tcaagtttgtgctcctcaatacatttgataacagctttcaaggcagacaactcgcgttca 24764 Query: 557 ttcatctcattctg 570 || || |||||||| Sbjct: 24765 ttaatttcattctg 24778 Score = 73.8 bits (37), Expect = 6e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || | || Sbjct: 14802 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 14861 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||||||| |||||||| | ||||||| || || ||||| ||||| || Sbjct: 14862 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 14921 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || |||||| ||||||| ||||||||||| Sbjct: 14922 agcaccatacacatactgcctctcgtaagggta 14954 Score = 65.9 bits (33), Expect = 1e-07 Identities = 123/153 (80%) Strand = Plus / Plus Query: 151 ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 210 |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| | || Sbjct: 24356 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 24415 Query: 211 gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 270 ||||| ||||| ||| |||||||| | ||||||| || ||||| || ||||| || Sbjct: 24416 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 24475 Query: 271 agcgccgtacacaaactgcctttcgtaagggta 303 ||| || || ||| ||||||| ||||||||||| Sbjct: 24476 agcaccatatacatactgcctctcgtaagggta 24508 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 39 aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 97 ||||| ||||||||||||| |||||||| || |||||||||||||||| | || || | Sbjct: 24253 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 24312 Query: 98 ggttaaaagcta 109 |||||||||||| Sbjct: 24313 ggttaaaagcta 24324
>gb|DQ241860.1| Solanum tuberosum clone 021F10 hypothetical protein mRNA, complete cds Length = 1849 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 467 ttctggagtggatccacgggatattgctcctccagtttgtgctcctcgatgcacttgatg 526 |||||||| |||||||| || |||||| |||| ||||| || || ||||||||||| || Sbjct: 1422 ttctggagaggatccacagggtattgcgcctcaagtttatggtcttcgatgcactttatc 1363 Query: 527 acagctttcagtgcagacagct 548 ||||| |||||||||| ||||| Sbjct: 1362 acagccttcagtgcagtcagct 1341
>gb|DQ284456.1| Solanum tuberosum clone 008B02 unknown mRNA Length = 1788 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 467 ttctggagtggatccacgggatattgctcctccagtttgtgctcctcgatgcacttgatg 526 |||||||| ||||||||||| |||||| |||| || || || || ||||||||||| || Sbjct: 1396 ttctggagaggatccacggggtattgcgcctcaagcttatggtcttcgatgcactttatc 1337 Query: 527 acagctttcagtgcagacagct 548 ||||| |||||||||| ||||| Sbjct: 1336 acagccttcagtgcagtcagct 1315
>gb|AC149585.7| Mus musculus BAC clone RP24-316M20 from chromosome y, complete sequence Length = 172093 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 tctgtgctccgggagacattt 587 ||||||||||||||||||||| Sbjct: 31969 tctgtgctccgggagacattt 31989
>emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in linkage group 8, complete sequence Length = 120875 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 actgatacaactacaacaaca 91 ||||||||||||||||||||| Sbjct: 92554 actgatacaactacaacaaca 92534 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 atgactgatacaactacaacaaca 91 ||||||||||| |||||||||||| Sbjct: 92701 atgactgatactactacaacaaca 92678 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 atgactgatacaactacaacaaca 91 ||||||||||| |||||||||||| Sbjct: 92641 atgactgatactactacaacaaca 92618
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 tctgtgctccgggagacattt 587 ||||||||||||||||||||| Sbjct: 117465 tctgtgctccgggagacattt 117485
>gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, complete sequence Length = 196020 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 tttttccgttcttgccatgtgacac 609 ||||||| ||||||||||||||||| Sbjct: 27143 tttttcctttcttgccatgtgacac 27167
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tgatacaactacaacaacagcagaa 97 |||||||| |||||||||||||||| Sbjct: 80191 tgatacaagtacaacaacagcagaa 80167
>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence Length = 150231 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 tctgtgctccgggagacattt 587 ||||||||||||||||||||| Sbjct: 102050 tctgtgctccgggagacattt 102070
>gb|AY303337.1| Haliotis midae clone HmD60 microsatellite sequence Length = 283 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ccctcatagcacacacacac 26 |||||||||||||||||||| Sbjct: 177 ccctcatagcacacacacac 196
>ref|NM_197981.1| Mus musculus RIKEN cDNA 5930416I19 gene (5930416I19Rik), mRNA Length = 1553 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 413 ttcatctcattctgtgctcc 394
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 143409 ttcatctcattctgtgctcc 143428
>ref|XM_705790.1| Candida albicans SC5314 putative transcription factor (CaO19.9381), mRNA Length = 2523 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tacaactacaacaacagcag 95 |||||||||||||||||||| Sbjct: 173 tacaactacaacaacagcag 192
>ref|XM_705781.1| Candida albicans SC5314 putative transcription factor (CaO19.1822), mRNA Length = 2532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tacaactacaacaacagcag 95 |||||||||||||||||||| Sbjct: 173 tacaactacaacaacagcag 192
>ref|XM_984006.1| PREDICTED: Mus musculus RIKEN cDNA 5930416I19 gene (5930416I19Rik), mRNA Length = 1651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 410 ttcatctcattctgtgctcc 391
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 acaactacaacaacagcaga 96 |||||||||||||||||||| Sbjct: 31792 acaactacaacaacagcaga 31811
>ref|XM_808720.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506445.20) partial mRNA Length = 3042 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tacaactacaacaacagcag 95 |||||||||||||||||||| Sbjct: 1559 tacaactacaacaacagcag 1578
>ref|XM_815199.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508277.340) partial mRNA Length = 3054 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tacaactacaacaacagcag 95 |||||||||||||||||||| Sbjct: 1568 tacaactacaacaacagcag 1587
>ref|XM_962841.1| PREDICTED: Tribolium castaneum similar to CG9492-PA (LOC656301), mRNA Length = 13974 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 agccttctccaactgaatca 461 |||||||||||||||||||| Sbjct: 5301 agccttctccaactgaatca 5282
>emb|CR759941.1| Rat DNA sequence from clone RP32-551O16 on chromosome Y, complete sequence Length = 174940 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 tctgtgctccgggagacatt 586 |||||||||||||||||||| Sbjct: 163918 tctgtgctccgggagacatt 163937 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 tctgtgctccgggagacatt 586 |||||||||||||||||||| Sbjct: 112690 tctgtgctccgggagacatt 112709
>dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBb Length = 80562 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgtgctcctcgatgcacttgatga 527 ||||||||||| |||||||||||| Sbjct: 72226 tgtgctcctcgctgcacttgatga 72249
>dbj|AK134456.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030498H24 product:unclassifiable, full insert sequence Length = 3057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 170 ttcatctcattctgtgctcc 151
>dbj|AK156717.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830043L12 product:hypothetical protein, full insert sequence Length = 2016 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 402 ttcatctcattctgtgctcc 383
>dbj|AK168313.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730089P18 product:hypothetical protein, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 458 ttcatctcattctgtgctcc 439
>dbj|AK029454.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833440O15 product:hypothetical protein, full insert sequence Length = 1222 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 97 ttcatctcattctgtgctcc 78
>dbj|AK020031.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930416I19 product:hypothetical protein, full insert sequence Length = 1427 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 264 ttcatctcattctgtgctcc 245
>dbj|AK011167.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600006N22 product:HYPOTHETICAL 17.4 KDA PROTEIN (FRAGMENT) homolog [Mus musculus], full insert sequence Length = 1314 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 209 ttcatctcattctgtgctcc 190
>dbj|AK011109.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510047L19 product:hypothetical protein, full insert sequence Length = 1225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 106 ttcatctcattctgtgctcc 87
>gb|AC005559.2|AC005559 Homo sapiens chromosome 19, cosmid F18382 (LLNLF-140D2) and 3' overlapping restriction fragment, complete sequence Length = 38911 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ggcgtgtgggtgggtgagatggtg 229 ||||||||||||| |||||||||| Sbjct: 23400 ggcgtgtgggtggatgagatggtg 23377
>ref|XM_392567.2| PREDICTED: Apis mellifera similar to CG32663-PA (LOC409039), mRNA Length = 2914 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tgactgatacaactacaaca 88 |||||||||||||||||||| Sbjct: 205 tgactgatacaactacaaca 186
>gb|AC007256.5| Homo sapiens BAC clone RP11-575C6 from 2, complete sequence Length = 181150 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aacaacagcagaaggttaaa 104 |||||||||||||||||||| Sbjct: 66006 aacaacagcagaaggttaaa 65987
>gb|BC027368.1| Mus musculus RIKEN cDNA 5930416I19 gene, mRNA (cDNA clone MGC:37174 IMAGE:4954113), complete cds Length = 1553 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 ttcatctcattctgtgctcc 576 |||||||||||||||||||| Sbjct: 413 ttcatctcattctgtgctcc 394
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cctggtactgcaccgggtag 190 |||||||||||||||||||| Sbjct: 344918 cctggtactgcaccgggtag 344937
>emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chromosome X, complete sequence Length = 224241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 agctcttctcggggaagctg 352 |||||||||||||||||||| Sbjct: 173686 agctcttctcggggaagctg 173667 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,493,631 Number of Sequences: 3902068 Number of extensions: 14493631 Number of successful extensions: 107939 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107725 Number of HSP's gapped (non-prelim): 186 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
