Clone Information

BLAST Search Result

Clone Name	rbags35p21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MNB1B_MAIZE (P27347) DNA-binding protein MNB1B (HMG1-like protein)	70	4e-12
2	HMGL_VICFA (P40620) HMG1/2-like protein	68	2e-11
3	HMGL_WHEAT (P40621) HMG1/2-like protein	66	8e-11
4	HMGL_IPONI (P40619) HMG1/2-like protein	63	9e-10
5	HMGL_SOYBN (P26585) HMG1/2-like protein (SB11 protein)	59	1e-08
6	HMGT_ONCMY (P07746) High mobility group-T protein (HMG-T) (HMG-T...	52	2e-06
7	HMGB3_MOUSE (O54879) High mobility group protein B3 (High mobili...	51	3e-06
8	HMGB3_HUMAN (O15347) High mobility group protein B3 (High mobili...	51	3e-06
9	HMGB3_CHICK (P40618) High mobility group protein B3 (High mobili...	48	3e-05
10	HMGB1_CHICK (P36194) High mobility group protein B1 (High mobili...	48	3e-05
11	HMGB1_RAT (P63159) High mobility group protein B1 (High mobility...	44	6e-04
12	HMGB1_MOUSE (P63158) High mobility group protein B1 (High mobili...	44	6e-04
13	HMGB1_CRIGR (P07156) High mobility group protein B1 (High mobili...	44	6e-04
14	HMGB2_RAT (P52925) High mobility group protein B2 (High mobility...	42	0.002
15	HMGB2_PIG (P17741) High mobility group protein B2 (High mobility...	42	0.002
16	HMGB1_MACFA (Q4R844) High mobility group protein B1 (High mobili...	42	0.002
17	HMGB1_HUMAN (P09429) High mobility group protein B1 (High mobili...	42	0.002
18	HMGB1_CANFA (Q6YKA4) High mobility group protein B1 (High mobili...	42	0.002
19	HMGB1_BOVIN (P10103) High mobility group protein B1 (High mobili...	42	0.002
20	HMGB2_HUMAN (P26583) High mobility group protein B2 (High mobili...	42	0.002
21	HMGB1_PIG (P12682) High mobility group protein B1 (High mobility...	42	0.002
22	HMGB2_MOUSE (P30681) High mobility group protein B2 (High mobili...	41	0.003
23	HMGB2_CHICK (P26584) High mobility group protein B2 (High mobili...	40	0.005
24	HMG1X_HUMAN (Q9UGV6) High mobility group protein 1-like 10 (HMG-...	40	0.005
25	SSRP1_CAEEL (P41848) Probable structure-specific recognition pro...	40	0.008
26	SSRP1_HUMAN (Q08945) Structure-specific recognition protein 1 (S...	39	0.011
27	SSRP1_ARATH (Q05153) Structure-specific recognition protein 1 ho...	39	0.014
28	SSRP1_CHICK (Q04678) Structure-specific recognition protein 1 (S...	39	0.019
29	SSRP1_RAT (Q04931) Structure-specific recognition protein 1 (SSR...	37	0.041
30	SSRP1_MOUSE (Q08943) Structure-specific recognition protein 1 (S...	37	0.041
31	HMG1A_CHITE (P40622) Mobility group protein 1A	37	0.071
32	NHP6A_YEAST (P11632) Nonhistone chromosomal protein 6A	35	0.21
33	NHP6B_YEAST (P11633) Nonhistone chromosomal protein 6B	34	0.46
34	NHP1_BABBO (P40632) High mobility group protein homolog NHP1	34	0.46
35	ABF2_YEAST (Q02486) ARS-binding factor 2, mitochondrial precursor	34	0.46
36	HMGC_TETTH (P11873) High mobility group protein C (Nonhistone ch...	33	0.60
37	SP100_GORGO (Q9N1Q6) Nuclear autoantigen Sp-100 (Speckled 100 kD...	33	0.60
38	SP100_HUMAN (P23497) Nuclear autoantigen Sp-100 (Speckled 100 kD...	33	0.60
39	SOX9_PONPY (P61754) Transcription factor SOX-9	32	1.3
40	SOX9_PIG (O18896) Transcription factor SOX-9	32	1.3
41	SOX9_PANTR (Q9BG89) Transcription factor SOX-9	32	1.3
42	SOX9_MACMU (P61753) Transcription factor SOX-9	32	1.3
43	SOX9_HUMAN (P48436) Transcription factor SOX-9	32	1.3
44	SOX9_CALJA (Q9BG91) Transcription factor SOX-9	32	1.3
45	SOX9_CHICK (P48434) Transcription factor SOX-9	32	1.3
46	SOX9_CANFA (Q7YRJ7) Transcription factor SOX-9	32	1.3
47	VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homo...	32	1.3
48	SOX9_MOUSE (Q04887) Transcription factor SOX-9	32	1.3
49	BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain ...	32	1.3
50	SOX10_RAT (O55170) Transcription factor SOX-10	32	1.7
51	SOX10_MOUSE (Q04888) Transcription factor SOX-10 (SOX-21) (Trans...	32	1.7
52	SOX10_HUMAN (P56693) Transcription factor SOX-10	32	1.7
53	SOX15_DROME (P40657) Putative transcription factor SOX-15 (Sox50E)	32	1.7
54	MNN4_YEAST (P36044) Protein MNN4	32	1.7
55	ARS2_DROME (Q9V9K7) Arsenite-resistance protein 2 homolog	32	2.3
56	SOX8_HUMAN (P57073) Transcription factor SOX-8	32	2.3
57	SOX8_CHICK (P57074) Transcription factor SOX-8	32	2.3
58	SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)	32	2.3
59	PANG_DROME (P91943) Protein pangolin	32	2.3
60	CRTC_CAEEL (P27798) Calreticulin precursor	32	2.3
61	SOX8_MOUSE (Q04886) Transcription factor SOX-8	31	3.0
62	HMGD_DROME (Q05783) High mobility group protein D (HMG-D)	31	3.0
63	SP100_HYLLA (Q9N1Q5) Nuclear autoantigen Sp-100 (Speckled 100 kD...	31	3.0
64	ROX1_YEAST (P25042) ROX1 repressor (Hypoxic function repressor) ...	31	3.0
65	PHPA_PLACH (Q02752) Acidic phosphoprotein precursor (50 kDa anti...	31	3.9
66	UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-b...	31	3.9
67	UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream-bin...	31	3.9
68	UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-b...	31	3.9
69	SOX11_XENLA (Q91731) Transcription factor SOX-11 (xSOX-11)	31	3.9
70	BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain ...	31	3.9
71	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	30	5.1
72	MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)	30	5.1
73	HMG_TETPY (P40625) High mobility group protein (Nonhistone chrom...	30	5.1
74	CTR9_YEAST (P89105) Protein CTR9	30	5.1
75	SOX15_MOUSE (P43267) SOX-15 protein	30	5.1
76	MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia p...	30	5.1
77	KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precu...	30	6.6
78	CBF5_CANAL (O43101) Centromere/microtubule-binding protein CBF5 ...	30	6.6
79	KNOB_PLAFD (P05229) Knob-associated histidine-rich protein (KAHR...	30	6.6
80	KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precu...	30	6.6
81	PMS1_HUMAN (P54277) PMS1 protein homolog 1 (DNA mismatch repair ...	30	8.7
82	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	30	8.7
83	SP100_PANTR (Q9N1Q7) Nuclear autoantigen Sp-100 (Speckled 100 kD...	30	8.7
84	SMCE1_MOUSE (O54941) SWI/SNF-related matrix-associated actin-dep...	30	8.7
85	SMCE1_HUMAN (Q969G3) SWI/SNF-related matrix-associated actin-dep...	30	8.7
86	Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/E...	30	8.7
87	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	8.7
88	CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro...	30	8.7

>MNB1B_MAIZE (P27347) DNA-binding protein MNB1B (HMG1-like protein)|
          Length = 157

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 32/86 (37%), Positives = 52/86 (60%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FFVFM +FR+++                AG++W+S+S+ DKAPYV KA + K +Y K  A
Sbjct: 48  FFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIA 107

Query: 373 SFENKESVSSKKAKTQDDEEAEGSKS 296
           ++   ES ++KKA  +++EE +  +S
Sbjct: 108 AYNKGESTAAKKAPAKEEEEEDEEES 133

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>HMGL_VICFA (P40620) HMG1/2-like protein|
          Length = 149

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FFVFM+DFR+QY                 GE+W+S+S+E+KAPYV++A +KK++YE T  
Sbjct: 52  FFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQ 111

Query: 373 SFENKESVSSKKAKTQDDEE-AEGSKS 296
           ++       +KK + +DDEE ++ SKS
Sbjct: 112 AY-------NKKLEGKDDEEGSDKSKS 131

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>HMGL_WHEAT (P40621) HMG1/2-like protein|
          Length = 161

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FFVFM +FR+++                AGE+W+S+S+ +KAPYV KA + K +Y K  A
Sbjct: 49  FFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIA 108

Query: 373 SFENKES--------VSSKKAKTQDDEEAEGSKS 296
           ++   ES         ++K+ + +D+EE++ SKS
Sbjct: 109 AYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKS 142

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>HMGL_IPONI (P40619) HMG1/2-like protein|
          Length = 144

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FFVFM DFR+ Y                 G+KW+ ++  +KAP++ KA ++KQ+YEK   
Sbjct: 43  FFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQ 102

Query: 373 SF---------ENKESVSSKKAKTQDDEEAEGS 302
           ++         E +ES  S+     DDE+ +GS
Sbjct: 103 AYNKKQAAGAAEEEESDKSRSEVNDDDEDQDGS 135

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>HMGL_SOYBN (P26585) HMG1/2-like protein (SB11 protein)|
          Length = 152

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FFVFM +FR+ +                AG KW++MSD +KAPYV K+ ++K +YEK   
Sbjct: 51  FFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMR 110

Query: 373 SFENKESVSSKKAKTQDDEEAEGSKS 296
           ++  K++         D+EE+E S S
Sbjct: 111 AYNKKQAEGPTGG---DEEESEKSVS 133

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>HMGT_ONCMY (P07746) High mobility group-T protein (HMG-T) (HMG-T1) (HMG-1)|
          Length = 204

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F +DFR Q                  GEKW +++ EDK PY +KA + K+ YEK   
Sbjct: 101 FFIFCADFRPQVKGETPGLSIGDVAKKL-GEKWNNLTAEDKVPYEKKASRLKEKYEKDIT 159

Query: 373 SFENKESV-------SSKKAKTQDDEE 314
           ++ NK  V       ++  AK  DD++
Sbjct: 160 AYRNKGKVPVSMPAKAAAPAKDDDDDD 186

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>HMGB3_MOUSE (O54879) High mobility group protein B3 (High mobility group|
           protein 4) (HMG-4) (High mobility group protein 2a)
           (HMG-2a)
          Length = 199

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+FR +                  GE W ++SD +K PYV KA + K+ YEK  A
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKL-GEMWNNLSDNEKQPYVTKAAKLKEKYEKDVA 157

Query: 373 SFENK---------ESVSSKKAKTQDDEEAE 308
            +++K           V+ KK + +++EE E
Sbjct: 158 DYKSKGKFDGAKGPAKVARKKVEEEEEEEEE 188

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>HMGB3_HUMAN (O15347) High mobility group protein B3 (High mobility group|
           protein 4) (HMG-4) (High mobility group protein 2a)
           (HMG-2a)
          Length = 199

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+FR +                  GE W +++D +K PY+ KA + K+ YEK  A
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKL-GEMWNNLNDSEKQPYITKAAKLKEKYEKDVA 157

Query: 373 SFENK---------ESVSSKKAKTQDDEEAE 308
            +++K           V+ KK + +D+EE E
Sbjct: 158 DYKSKGKFDGAKGPAKVARKKVEEEDEEEEE 188

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>HMGB3_CHICK (P40618) High mobility group protein B3 (High mobility group|
           protein 4) (HMG-4) (High mobility group protein 2a)
           (HMG-2a)
          Length = 201

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+FR +                  GE W ++SD +K PY  KA + K+ YEK  A
Sbjct: 99  FFLFCSEFRPKIKSTNPGISIGDVAKKL-GEMWNNLSDGEKQPYNNKAAKLKEKYEKDVA 157

Query: 373 SFENK----------ESVSSKKAKTQDDEEAE 308
            +++K             + KK + +D+EE E
Sbjct: 158 DYKSKGKFDGAKGAATKAARKKVEEEDEEEEE 189

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>HMGB1_CHICK (P36194) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 200

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+FR +                  GE W ++SD +K PY  KA + K+ YEK  A
Sbjct: 98  FFLFCSEFRPKIKSTNPGISIGDVAKKL-GEMWNNLSDGEKQPYNNKAAKLKEKYEKDVA 156

Query: 373 SFENK----------ESVSSKKAKTQDDEEAE 308
            +++K             + KK + +D+EE E
Sbjct: 157 DYKSKGKFDGAKGAATKAARKKVEEEDEEEEE 188

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>HMGB1_RAT (P63159) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1) (Amphoterin) (Heparin-binding protein
           p30)
          Length = 214

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + +DDEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 193

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>HMGB1_MOUSE (P63158) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + +DDEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 193

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>HMGB1_CRIGR (P07156) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1) (Fragment)
          Length = 180

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 67  FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 125

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + +DDEE E
Sbjct: 126 AYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDE 159

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>HMGB2_RAT (P52925) High mobility group protein B2 (High mobility group|
           protein 2) (HMG-2)
          Length = 209

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+ R +                  GE W   S +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEHRPKIKSEHPGLSIGDTAKKL-GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIA 159

Query: 373 SFENK-----------ESVSSKKAKTQDDEEAE 308
           ++  K               SKK    +DEE E
Sbjct: 160 AYRAKGKSEVGKKGPGRPTGSKKKNEPEDEEEE 192

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>HMGB2_PIG (P17741) High mobility group protein B2 (High mobility group|
           protein 2) (HMG-2)
          Length = 209

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+ R +                  GE W   S +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEHRPKIKSEHPGLSIGDTAKKL-GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIA 159

Query: 373 SFENK-----------ESVSSKKAKTQDDEEAE 308
           ++  K               SKK    +DEE E
Sbjct: 160 AYRAKGKGEAGKKGPGRPTGSKKKNEPEDEEEE 192

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>HMGB1_MACFA (Q4R844) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + ++DEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193

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>HMGB1_HUMAN (P09429) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + ++DEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193

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>HMGB1_CANFA (Q6YKA4) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + ++DEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193

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>HMGB1_BOVIN (P10103) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + ++DEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193

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>HMGB2_HUMAN (P26583) High mobility group protein B2 (High mobility group|
           protein 2) (HMG-2)
          Length = 208

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+ R +                  GE W   S +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEHRPKIKSEHPGLSIGDTAKKL-GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIA 159

Query: 373 SFENK-----------ESVSSKKAKTQDDEEAE 308
           ++  K               SKK    +DEE E
Sbjct: 160 AYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEE 192

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>HMGB1_PIG (P12682) High mobility group protein B1 (High mobility group|
           protein 1) (HMG-1)
          Length = 214

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                  GE W + + +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKL-GEMWNNTAADDKHPYEKKAAKLKEKYEKDIA 159

Query: 373 SFEN------------KESVSSKKAKTQDDEEAE 308
           ++              K   S KK + ++DEE E
Sbjct: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193

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>HMGB2_MOUSE (P30681) High mobility group protein B2 (High mobility group|
           protein 2) (HMG-2)
          Length = 209

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENK-----------ESVSSKKAKTQDD 320
           GE W   S +DK PY +KA + K+ YEK  A++  K               SKK    +D
Sbjct: 129 GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPED 188

Query: 319 EEAE 308
           EE E
Sbjct: 189 EEEE 192

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>HMGB2_CHICK (P26584) High mobility group protein B2 (High mobility group|
           protein 2) (HMG-2)
          Length = 206

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S+ R +                  GE W     +DK PY +KA + K+ YEK  A
Sbjct: 101 FFLFCSEHRPKIKNDHPGLSIGDTAKKL-GEMWSEQLAKDKQPYEQKAAKLKEKYEKDIA 159

Query: 373 SFENKE------------SVSSKKAKTQDDEEAE 308
           ++  K             + S KKA+ +++EE E
Sbjct: 160 AYRAKSKSDAGKKGPGRPAGSKKKAEPEEEEEEE 193

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>HMG1X_HUMAN (Q9UGV6) High mobility group protein 1-like 10 (HMG-1L10)|
          Length = 211

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFEN------------KESVSSKKAKTQD 323
           GE W + + +DK PY +KA + K+ YEK  A++              K   S KK + ++
Sbjct: 130 GEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 189

Query: 322 DEEAE 308
           DEE E
Sbjct: 190 DEEDE 194

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>SSRP1_CAEEL (P41848) Probable structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
          Length = 697

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENK--ESVSSKKAKTQDDEEAEGSKS 296
           G KW++MS +DK  + EKA + K  YEK    +      S SSK + ++  +++ G  S
Sbjct: 589 GAKWKTMSSDDKKKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSS 647

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>SSRP1_HUMAN (Q08945) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160) (Chromatin-specific transcription elongation
           factor 80 kDa subunit) (FACT 80 kDa subunit)
          Length = 709

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           GE W+ MS E K  +  KA   ++DYEK    +E     SSK+ K++  ++ +
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVK 634

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>SSRP1_ARATH (Q05153) Structure-specific recognition protein 1 homolog (HMG|
           protein)
          Length = 646

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQD 323
           G+KWR MS +DK PY  KA   KQ Y+   + ++N + ++       D
Sbjct: 597 GDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSD 644

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>SSRP1_CHICK (Q04678) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160) (Fragment)
          Length = 669

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASF------ENKESVSSKKAKTQDDEEAEG 305
           GE W++MS E K  +  KA   K+DYEK    +      E+ +   SKK K + +++ +G
Sbjct: 543 GELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKKQEKQMKG 602

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>SSRP1_RAT (Q04931) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160)
          Length = 709

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           GE W+ MS E K  +  KA   +++YEK    +E     SSK+ K++  ++ +
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVK 634

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>SSRP1_MOUSE (Q08943) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160)
          Length = 708

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           GE W+ MS E K  +  KA   +++YEK    +E     SSK+ K++  ++ +
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVK 634

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>HMG1A_CHITE (P40622) Mobility group protein 1A|
          Length = 114

 Score = 36.6 bits (83), Expect = 0.071
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 21/76 (27%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFE---------------------NKESV 350
           GE WR M  +DK+ +  KA + K++YEK    FE                      K + 
Sbjct: 40  GELWRGM--KDKSEWEAKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAK 97

Query: 349 SSKKAKTQDDEEAEGS 302
            SKK  ++DDEE + S
Sbjct: 98  KSKKKDSEDDEEEDES 113

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>NHP6A_YEAST (P11632) Nonhistone chromosomal protein 6A|
          Length = 93

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTK 377
           GEKW++++ E+K PY  KA   K+ YE  K
Sbjct: 56  GEKWKALTPEEKQPYEAKAQADKKRYESEK 85

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>NHP6B_YEAST (P11633) Nonhistone chromosomal protein 6B|
          Length = 99

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTK 377
           GE+W++++ E+K PY  KA   K+ YE  K
Sbjct: 62  GERWKALTAEEKQPYESKAQADKKRYESEK 91

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>NHP1_BABBO (P40632) High mobility group protein homolog NHP1|
          Length = 97

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKE 356
           G  W ++SDE+K PY   + + +  YE+ KA +  ++
Sbjct: 60  GAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQRK 96

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>ABF2_YEAST (Q02486) ARS-binding factor 2, mitochondrial precursor|
          Length = 183

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 15/65 (23%), Positives = 30/65 (46%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           +F+++ D R Q+                 GEKW+++  + K  Y+ +  +   +Y+K K 
Sbjct: 50  YFLYLQDHRSQFVKENPTLRPAEISKIA-GEKWQNLEADIKEKYISERKKLYSEYQKAKK 108

Query: 373 SFENK 359
            F+ K
Sbjct: 109 EFDEK 113

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>HMGC_TETTH (P11873) High mobility group protein C (Nonhistone chromosomal|
           protein LG-1)
          Length = 100

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           EKW+++ +++K  Y     + K  YEK   ++E K     K+ K + ++  +GSK
Sbjct: 48  EKWKAVGEKEKKKYETLQSEAKAKYEKDMQAYEKKYGKPEKQKKIKKNK--KGSK 100

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>SP100_GORGO (Q9N1Q6) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear|
           dot-associated Sp100 protein) (Fragment)
          Length = 225

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                 AG  W + +  DK  Y +KA + K+ Y+K  A
Sbjct: 125 FFLFCSEYRPKIKGEHPGLSIDDVVKKLAG-MWNNTAAADKQFYEKKAAKLKEKYKKDIA 183

Query: 373 SFE--------NKESVSSKKAKTQDDEEAE 308
           ++          K +V ++K+K + +EE +
Sbjct: 184 AYRAKGMPNSAKKRAVKAEKSKKKREEEED 213

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>SP100_HUMAN (P23497) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear|
            dot-associated Sp100 protein) (Lysp100b)
          Length = 879

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = -3

Query: 553  FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
            FF+F S++R +                 AG  W + +  DK  Y +KA + K+ Y+K  A
Sbjct: 776  FFLFCSEYRPKIKGEHPGLSIDDVVKKLAG-MWNNTAAADKQFYEKKAAKLKEKYKKDIA 834

Query: 373  SFENKESVSSKKAKTQDDEEAEGSK 299
            ++  K   +S K +    E+++  K
Sbjct: 835  AYRAKGKPNSAKKRVVKAEKSKKKK 859

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>SOX9_PONPY (P61754) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_PIG (O18896) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_PANTR (Q9BG89) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_MACMU (P61753) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_HUMAN (P48436) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_CALJA (Q9BG91) Transcription factor SOX-9|
          Length = 509

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>SOX9_CHICK (P48434) Transcription factor SOX-9|
          Length = 494

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           G+ WR +++ +K P+VE+A + +  ++K    ++ +     K  K    E+ EGS+
Sbjct: 141 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPR-RRKTVKNGQSEQEEGSE 195

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>SOX9_CANFA (Q7YRJ7) Transcription factor SOX-9|
          Length = 513

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homolog (EC|
           1.-.-.-)
          Length = 484

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           +K     D+ K    +K  +KK+D +K +A  E K+    K+   +DD++AE  K
Sbjct: 422 KKDEEKKDDKKKDDKKKDDKKKEDKKKDEAKKEEKKDEKKKEEAKKDDKKAEEKK 476

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>SOX9_MOUSE (Q04887) Transcription factor SOX-9|
          Length = 507

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +++ +K P+VE+A     Q K+D+   K     ++SV + +A+ ++  E
Sbjct: 140 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATE 194

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>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B|
           (Williams-Beuren syndrome chromosome region 9 protein)
           (WBRS9) (Williams syndrome transcription factor)
           (hWALP2)
          Length = 1483

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQ--KKQDYEKTKASFENKESVSSKKAKTQDDEEAEG 305
           ++W SMS+E +  Y++K  +  KK+  EK K   E +     +K K  +D+E  G
Sbjct: 533 KRWASMSEEQRKEYLKKKREELKKKLKEKAKERREKEMLERLEKQKRYEDQELTG 587

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>SOX10_RAT (O55170) Transcription factor SOX-10|
          Length = 466

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 12/57 (21%), Positives = 29/57 (50%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSKS 296
           G+ WR +++ DK P++E+A + +  ++K    ++ +          Q + E  G ++
Sbjct: 139 GKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGET 195

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>SOX10_MOUSE (Q04888) Transcription factor SOX-10 (SOX-21) (Transcription factor|
           SOX-M)
          Length = 466

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 12/57 (21%), Positives = 29/57 (50%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSKS 296
           G+ WR +++ DK P++E+A + +  ++K    ++ +          Q + E  G ++
Sbjct: 139 GKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEA 195

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>SOX10_HUMAN (P56693) Transcription factor SOX-10|
          Length = 466

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 12/57 (21%), Positives = 29/57 (50%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSKS 296
           G+ WR +++ DK P++E+A + +  ++K    ++ +          Q + E  G ++
Sbjct: 139 GKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEA 195

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>SOX15_DROME (P40657) Putative transcription factor SOX-15 (Sox50E)|
          Length = 784

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKA 410
           G+KWRS++ +D+ PYVE+A
Sbjct: 250 GKKWRSLTPQDRRPYVEEA 268

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>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -3

Query: 463  EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
            E+ +   +E+K    E+  +KK++ EK K   E K+    ++ K Q++EE
Sbjct: 1048 EEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEE 1097



 Score = 30.4 bits (67), Expect = 5.1
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -3

Query: 463  EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
            E+ +   +E+K    E+  +KK++ EK K   E K+    ++ K +++EE
Sbjct: 1056 EEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEE 1105



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/56 (26%), Positives = 33/56 (58%)
 Frame = -3

Query: 466  GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
            GEK ++  +E+K    E+  +K ++ EK K   +NK++   +K K +++E+ +  +
Sbjct: 1112 GEKMKNEDEENKKNEDEEK-KKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEE 1166

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>ARS2_DROME (Q9V9K7) Arsenite-resistance protein 2 homolog|
          Length = 943

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSKS 296
           GE W     E+ AP  E A   K    K +    NK+    +K  + DD+ +    S
Sbjct: 328 GENWDDDDAENSAPKKELAEDSKDSDSKPEDKQLNKKKTKKRKRNSSDDDSSSSESS 384

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>SOX8_HUMAN (P57073) Transcription factor SOX-8|
          Length = 446

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA--SFENKESVSSKKAKTQDDEEAE 308
           G+ WR +S+ +K P+VE+A + +  ++K      ++ +   S+K   +  D  AE
Sbjct: 137 GKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGAE 191

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>SOX8_CHICK (P57074) Transcription factor SOX-8|
          Length = 470

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           G+ WR +S+ +K P+VE+A     Q K+D+   K     ++SV  K  ++  D  AE
Sbjct: 144 GKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSV--KAGQSDSDSGAE 198

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>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)|
          Length = 461

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 12/53 (22%), Positives = 28/53 (52%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           G+ WR +++ DK P++E+A + +  ++K    ++ +         TQ + E +
Sbjct: 133 GKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQGEGEGQ 185

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>PANG_DROME (P91943) Protein pangolin|
          Length = 751

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKES---VSSKKAKTQD 323
           G +W  +S E+++ Y EKA Q++Q + +    +  +++   VS KK + +D
Sbjct: 308 GRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKD 358

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>CRTC_CAEEL (P27798) Calreticulin precursor|
          Length = 395

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 436 DKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAE 308
           DK   VEK  ++K D E  KA  E ++    +K   +DD+E E
Sbjct: 343 DKLKTVEKEKKEKADEETRKAEEEARKKAEEEKEAKKDDDEEE 385

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>SOX8_MOUSE (Q04886) Transcription factor SOX-8|
          Length = 464

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAG----QKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           G+ WR +S+ +K P+VE+A     Q K+D+   K     ++SV + ++ +    E
Sbjct: 134 GKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKTGRSDSDSGTE 188

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>HMGD_DROME (Q05783) High mobility group protein D (HMG-D)|
          Length = 112

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 20/73 (27%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFE--------------------NKESVS 347
           GE WR+M  +DK+ +  KA + K DY++    FE                     K +  
Sbjct: 40  GELWRAM--KDKSEWEAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKK 97

Query: 346 SKKAKTQDDEEAE 308
           SKK ++ +D++ E
Sbjct: 98  SKKEESDEDDDDE 110

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>SP100_HYLLA (Q9N1Q5) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear|
           dot-associated Sp100 protein) (Fragment)
          Length = 242

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKT-- 380
           FF+F S++R +                 A E W + +  DK  Y +KA + K+ Y+K   
Sbjct: 150 FFLFCSEYRPKIKGEHPGLSIDDVVKKLA-EMWNNTAAADKQFYEKKAAKLKEKYKKDIA 208

Query: 379 ------KASFENKESVSSKKAKTQDDEEAE 308
                 K +   K  V ++K+K + +EE +
Sbjct: 209 ADRAKGKPNSAKKRVVKAEKSKKKKEEEED 238

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>ROX1_YEAST (P25042) ROX1 repressor (Hypoxic function repressor)|
           (Heme-dependent repression factor)
          Length = 368

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKK 338
           G KW+ +  EDKA +   A ++K ++E+    ++ K    SKK
Sbjct: 50  GTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKK 92

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>PHPA_PLACH (Q02752) Acidic phosphoprotein precursor (50 kDa antigen)|
          Length = 441

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/40 (32%), Positives = 27/40 (67%)
 Frame = -3

Query: 418 EKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           E+ G+KK+  EK+K   +NK ++++KK K ++ ++ +  K
Sbjct: 369 EQKGKKKKAKEKSKKKVKNKPTMTTKKKKKKEKKKKKKEK 408

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>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1)
          Length = 765

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYE 386
           ++W+ +S ++K  Y +K  QKK+DYE
Sbjct: 330 QQWKLLSQKEKDAYHKKCDQKKKDYE 355

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>UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1)
          Length = 764

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYE 386
           ++W+ +S ++K  Y +K  QKK+DYE
Sbjct: 330 QQWKLLSQKEKDAYHKKCDQKKKDYE 355

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>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-binding factor|
           1) (UBF-1) (Autoantigen NOR-90)
          Length = 764

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYE 386
           ++W+ +S ++K  Y +K  QKK+DYE
Sbjct: 330 QQWKLLSQKEKDAYHKKCDQKKKDYE 355

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>SOX11_XENLA (Q91731) Transcription factor SOX-11 (xSOX-11)|
          Length = 382

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKK----QDYEKTKASFENKESV-----SSKKAKTQDDEE 314
           G++W+ ++D +K P++E+A + +     DY   K     K  V     S   A TQ  E+
Sbjct: 82  GKRWKMLNDSEKIPFIEEAERLRLKHMADYPDYKYRPRKKPKVDPSASSKPPALTQSPEK 141

Query: 313 AEGSKS 296
           +  S+S
Sbjct: 142 SPKSRS 147

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>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B|
           (Williams-Beuren syndrome chromosome region 9 protein
           homolog) (WBRS9)
          Length = 1479

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQ--KKQDYEKTKASFENKESVSSKKAKTQDDEEAEG 305
           ++W SMS+E +  Y++K  Q  K++  EK K   E +     +K K  +D+E  G
Sbjct: 534 KRWASMSEEQRKEYLKKKRQELKERLREKAKERREREMLERLEKQKRFEDQELGG 588

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 457  WRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQD 323
            WR  S +++APYV+KA   +      K    N    S K+ + QD
Sbjct: 1682 WRKASSQERAPYVQKARDNRAALRINKVQMSND---SMKRQQQQD 1723

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>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 466  GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
            GE     +  +K P +++ G+ K D + T  +        SKK KT+D+EE E  K
Sbjct: 1819 GEAIEEQTKSNKRP-IDEVGELKNDEDDTTENINE-----SKKIKTEDEEEKETDK 1868

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>HMG_TETPY (P40625) High mobility group protein (Nonhistone chromosomal|
           protein)
          Length = 99

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           EKW+ +++++K  Y     + K  YEK   ++E K     K  K +  +  +GSK
Sbjct: 47  EKWKHVTEKEKKKYEGLQQEAKAKYEKDMQAYEKKYGKPEKVKKIK--KSKKGSK 99

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>CTR9_YEAST (P89105) Protein CTR9|
          Length = 1077

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 448  MSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
            +SD+D     E+  QK++   KTK S E+K   ++KK  +  DE+
Sbjct: 976  LSDKDNEYDEEQPRQKRKRSTKTKNSGESKRRKAAKKTLSDSDED 1020

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>SOX15_MOUSE (P43267) SOX-15 protein|
          Length = 231

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKT 329
           G +W+ + DE+K P+VE+A + +  + +    ++ +    SK + T
Sbjct: 82  GAQWKLLGDEEKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSST 127

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>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 457  WRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQD 323
            WR  S +++APYV+KA   +      K    N    S K+ + QD
Sbjct: 1671 WRKASSQERAPYVQKARDNRAALRINKVQMSND---SMKRQQQQD 1712

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>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)|
           (HRPI) (Fragment)
          Length = 473

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -3

Query: 466 GEKWRSMS--DEDKAPYVEKAGQKKQDYEKTKASF----ENKESVSSKKAKTQDDEEAEG 305
           GEK +S    D + A  V+    K  D EK K+      E+ ESV SKK+  +  E+  G
Sbjct: 387 GEKKKSKKHKDNEDAESVKSKKHKSHDCEKKKSKKHKDNEDAESVKSKKSVKEKGEKHNG 446

Query: 304 SK 299
            K
Sbjct: 447 KK 448

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>CBF5_CANAL (O43101) Centromere/microtubule-binding protein CBF5|
           (Centromere-binding factor 5) (Small nucleolar RNP
           protein CBF5) (H/ACA snoRNP protein CBF5)
          Length = 479

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 439 EDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           EDK+   EK  +K++  +K K   + K+    KK K +DD      K
Sbjct: 427 EDKSEKKEKKDKKEKKEKKDKKEKKEKKDKKEKKRKAEDDSSKSEKK 473

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>KNOB_PLAFD (P05229) Knob-associated histidine-rich protein (KAHRP) (Fragment)|
          Length = 277

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -3

Query: 466 GEKWRSMS--DEDKAPYVEKAGQKKQDYEKTKASF----ENKESVSSKKAKTQDDEEAEG 305
           GEK +S    D + A  V+    K  D EK K+      E+ ESV SKK+  +  E+  G
Sbjct: 202 GEKKKSKKHKDNEDAESVKSKKHKSHDCEKKKSKKHKDNEDAESVKSKKSVKEKGEKHNG 261

Query: 304 SK 299
            K
Sbjct: 262 KK 263

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>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)|
           (KP)
          Length = 634

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -3

Query: 466 GEKWRSMS--DEDKAPYVEKAGQKKQDYEKTKASF----ENKESVSSKKAKTQDDEEAEG 305
           GEK +S    D + A  V+    K  D EK K+      E+ ESV SKK+  +  E+  G
Sbjct: 387 GEKKKSKKHKDNEDAESVKSKKHKSHDCEKKKSKKHKDNEDAESVKSKKSVKEKGEKHNG 446

Query: 304 SK 299
            K
Sbjct: 447 KK 448

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>PMS1_HUMAN (P54277) PMS1 protein homolog 1 (DNA mismatch repair protein PMS1)|
          Length = 932

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDY-EKTKASFENKESVSSKKAK 332
           E W+++S+E+K  Y EKA +  + Y  + K + E +  +S K  +
Sbjct: 607 ELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDGR 651

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 454 RSMSDEDKAPYVEKAGQKKQDYEKTKA-SFENKESVSSKKAKTQDDEEAE 308
           + +S +D+A Y E+   K++   K +A S ++K  + SK    +DDE+ E
Sbjct: 575 KGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDE 624



 Score = 29.6 bits (65), Expect = 8.7
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYE 386
           ++W+ +S ++K  Y +K  Q+K+DYE
Sbjct: 330 QRWKLLSQKEKDAYHKKCEQRKKDYE 355



 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEE 314
           +K++ + ++ K  Y++   ++KQD+E+  A F  +     +  K  D  E
Sbjct: 148 KKYKELPEKKKMKYIQDFQREKQDFERNMAKFREEHPDLMQNPKKSDVPE 197

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>SP100_PANTR (Q9N1Q7) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear|
           dot-associated Sp100 protein) (Fragment)
          Length = 215

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = -3

Query: 553 FFVFMSDFRQQYXXXXXXXXXXXXXXXXAGEKWRSMSDEDKAPYVEKAGQKKQDYEKTKA 374
           FF+F S++R +                 AG  W + +  DK  Y +KA + K+ Y+K  A
Sbjct: 131 FFLFCSEYRPKIKGEHPGLSIDDVVKKLAG-MWNNTAASDKQFYEKKAAKLKEKYKKDIA 189

Query: 373 SFENKESVSSKKAKTQDDEEAEGSK 299
           +   K   +S   +    E+++  K
Sbjct: 190 ACRAKGKPNSATKRVVKAEKSKKKK 214

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>SMCE1_MOUSE (O54941) SWI/SNF-related matrix-associated actin-dependent|
           regulator chromatin subfamily E member 1
           (BRG1-associated factor 57)
          Length = 411

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESV-----SSKKAKTQDDEEAEGS 302
           G  WR ++DE+K  Y+ +   +K +Y ++  ++ N  +      +  +A+   +EE+   
Sbjct: 101 GGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQR 160

Query: 301 KS 296
           +S
Sbjct: 161 QS 162

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>SMCE1_HUMAN (Q969G3) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily E member 1
           (BRG1-associated factor 57)
          Length = 411

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESV-----SSKKAKTQDDEEAEGS 302
           G  WR ++DE+K  Y+ +   +K +Y ++  ++ N  +      +  +A+   +EE+   
Sbjct: 101 GGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQR 160

Query: 301 KS 296
           +S
Sbjct: 161 QS 162

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>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040|
          Length = 592

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 448 MSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDDEEAEGSK 299
           M DE+KA   EKA  K++   K K           ++ K  + EE E S+
Sbjct: 322 MRDEEKAKSKEKAKSKEKAKSKKKGESVGVSEAKEEEKKESETEEVEASE 371

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 463 EKWRSMSDEDKAPYVEKAGQKKQDYE 386
           ++W+ +S ++K  Y +K  Q+K+DYE
Sbjct: 330 QRWKLLSQKEKDAYNKKCEQRKKDYE 355

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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 466 GEKWRSMSDEDKAPYVEKAGQKKQDYEKTKASFENKESVSSKKAKTQDD 320
           GEK  S SDE+K+    K  +KK+  ++ + S + ++S   + A + DD
Sbjct: 87  GEKHHSDSDEEKSHRRLKRKRKKEREKEKRRSKKRRKSKHKRHASSSDD 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,314,406
Number of Sequences: 219361
Number of extensions: 913617
Number of successful extensions: 3184
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3170
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result