ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
2emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 105 2e-19
3dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
5emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 105 2e-19
6gb|AC146172.2| Pan troglodytes BAC clone RP43-24M4 from 7, compl... 46 0.16
7gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, comp... 46 0.16
8gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, compl... 46 0.16
9gb|AC148316.3| Pan troglodytes BAC clone CH251-508B1 from chromo... 46 0.16
10gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L... 46 0.16
11gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, comp... 46 0.16
12dbj|AK130103.1| Homo sapiens cDNA FLJ26593 fis, clone LNF08111 46 0.16
13gb|AC008234.9| Drosophila melanogaster clone BACR32M04, complete... 42 2.4
14gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosom... 42 2.4
15gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, r... 42 2.4
16gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosom... 42 2.4
17gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20... 42 2.4
18emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on ch... 42 2.4
19gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, com... 40 9.6
20gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosom... 40 9.6
21gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, com... 40 9.6
22gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, co... 40 9.6
23gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility l... 40 9.6
24gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.6
25gb|AC122302.4| Mus musculus BAC clone RP23-276E10 from chromosom... 40 9.6
26gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome ... 40 9.6
27gb|AC093360.7| Mus musculus chromosome 3, clone RP23-57F18, comp... 40 9.6
28emb|CT025689.6| Mouse DNA sequence from clone RP24-236L7 on chro... 40 9.6
29gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome... 40 9.6
30gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosom... 40 9.6
31ref|XM_800962.1| Trypanosoma cruzi strain CL Brener proline oxid... 40 9.6
32gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome... 40 9.6
33gb|AC121804.3| Mus musculus BAC clone RP23-442I5 from chromosome... 40 9.6
34ref|XM_547747.2| PREDICTED: Canis familiaris similar to CG10889-... 40 9.6
35gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, com... 40 9.6
36gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, com... 40 9.6
37gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, comp... 40 9.6
38emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chr... 40 9.6
39emb|CR380951.1| Candida glabrata strain CBS138 chromosome E comp... 40 9.6
40gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswel... 40 9.6
41gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswel... 40 9.6
42gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, comp... 40 9.6
43gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosom... 40 9.6
44ref|NM_001027888.1| Caenorhabditis elegans C42C1.4a (C42C1.4) mR... 40 9.6
45gb|AC106895.5| Homo sapiens BAC clone RP11-161D15 from 4, comple... 40 9.6
46gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome... 40 9.6
47gb|AC024590.8| Homo sapiens chromosome 16 clone RP11-487C14, com... 40 9.6
48gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2,... 40 9.6
49gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4... 40 9.6
50emb|AL929373.15| Mouse DNA sequence from clone RP23-31K16 on chr... 40 9.6
51gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78... 40 9.6
52gb|AF043695.2| Caenorhabditis elegans cosmid C42C1, complete seq... 40 9.6
53gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202... 40 9.6
54gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 9.6
55gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, co... 40 9.6
56emb|BX005053.5| Mouse DNA sequence from clone RP23-35D18 on chro... 40 9.6
57gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, comple... 40 9.6
58emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chro... 40 9.6
59gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, comple... 40 9.6
60gb|AC149220.3| Mus musculus BAC clone RP23-412J12 from 7, comple... 40 9.6
61emb|AL840637.9| Mouse DNA sequence from clone RP23-113H3 on chro... 40 9.6
62emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on ch... 40 9.6
63emb|AL732456.6| Mouse DNA sequence from clone RP23-405D18 on chr... 40 9.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 281      tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 340
                |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 20852658 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 20852717

                                                         
Query: 341      gttgtcctctttcttctgctgtcccttcccagttctcctgc 381
                ||||  |||||||||| ||||  ||||||||||| ||||||
Sbjct: 20852718 gttggtctctttcttcggctgcaccttcccagttttcctgc 20852758
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>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 281   tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 340
             |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 54388 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 54447

                                                      
Query: 341   gttgtcctctttcttctgctgtcccttcccagttctcctgc 381
             ||||  |||||||||| ||||  ||||||||||| ||||||
Sbjct: 54448 gttggtctctttcttcggctgcaccttcccagttttcctgc 54488
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>dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O07, full
            insert sequence
          Length = 2150

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 340
            |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 1807 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 1748

                                                     
Query: 341  gttgtcctctttcttctgctgtcccttcccagttctcctgc 381
            ||||  |||||||||| ||||  ||||||||||| ||||||
Sbjct: 1747 gttggtctctttcttcggctgcaccttcccagttttcctgc 1707
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 281      tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 340
                |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 20778872 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 20778931

                                                         
Query: 341      gttgtcctctttcttctgctgtcccttcccagttctcctgc 381
                ||||  |||||||||| ||||  ||||||||||| ||||||
Sbjct: 20778932 gttggtctctttcttcggctgcaccttcccagttttcctgc 20778972
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 107819

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                          
Query: 281    tcattttgcccacaacttggacatagaaacaacaaatgcccttacgataagccaaaatag 340
              |||||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||| ||
Sbjct: 106337 tcattttgcccacatcttggacatggaaacaacaaatgccctaatgattagccaaaacag 106278

                                                       
Query: 341    gttgtcctctttcttctgctgtcccttcccagttctcctgc 381
              ||||  |||||||||| ||||  ||||||||||| ||||||
Sbjct: 106277 gttggtctctttcttcggctgcaccttcccagttttcctgc 106237
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>gb|AC146172.2| Pan troglodytes BAC clone RP43-24M4 from 7, complete sequence
          Length = 223283

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 463   atatcttgaattcacttccatct 485
             |||||||||||||||||||||||
Sbjct: 63461 atatcttgaattcacttccatct 63483
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>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence
          Length = 190626

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 463    atatcttgaattcacttccatct 485
              |||||||||||||||||||||||
Sbjct: 175708 atatcttgaattcacttccatct 175730
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>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence
          Length = 165269

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 463    atatcttgaattcacttccatct 485
              |||||||||||||||||||||||
Sbjct: 121612 atatcttgaattcacttccatct 121634
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>gb|AC148316.3| Pan troglodytes BAC clone CH251-508B1 from chromosome 7, complete
             sequence
          Length = 162525

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 463   atatcttgaattcacttccatct 485
             |||||||||||||||||||||||
Sbjct: 63193 atatcttgaattcacttccatct 63215
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>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence
          Length = 150856

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 463   atatcttgaattcacttccatct 485
             |||||||||||||||||||||||
Sbjct: 34939 atatcttgaattcacttccatct 34917
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>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence
          Length = 184644

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 463    atatcttgaattcacttccatct 485
              |||||||||||||||||||||||
Sbjct: 103210 atatcttgaattcacttccatct 103188
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>dbj|AK130103.1| Homo sapiens cDNA FLJ26593 fis, clone LNF08111
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 463  atatcttgaattcacttccatct 485
            |||||||||||||||||||||||
Sbjct: 1300 atatcttgaattcacttccatct 1278
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>gb|AC008234.9| Drosophila melanogaster clone BACR32M04, complete sequence
          Length = 148847

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 641    ttccattgttgctgcacttgt 661
              |||||||||||||||||||||
Sbjct: 143434 ttccattgttgctgcacttgt 143414
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>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence
          Length = 205684

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     tgtcaacttgacacagcagag 77
              |||||||||||||||||||||
Sbjct: 153870 tgtcaacttgacacagcagag 153850
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>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone
             BACR19J06, complete sequence
          Length = 175053

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 641   ttccattgttgctgcacttgt 661
             |||||||||||||||||||||
Sbjct: 33009 ttccattgttgctgcacttgt 32989
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>gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosome 12, complete sequence
          Length = 168486

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     tgtcaacttgacacagcagag 77
              |||||||||||||||||||||
Sbjct: 126834 tgtcaacttgacacagcagag 126854
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>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the complete
              sequence
          Length = 224614

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 641    ttccattgttgctgcacttgt 661
              |||||||||||||||||||||
Sbjct: 159507 ttccattgttgctgcacttgt 159487
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>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete
              sequence
          Length = 190466

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 220    aggcaggaagacatcccatgc 240
              |||||||||||||||||||||
Sbjct: 137993 aggcaggaagacatcccatgc 138013
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>gb|AC121147.8| Mus musculus chromosome 3, clone RP24-369O15, complete sequence
          Length = 178352

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    ttgtggttgtcttccttttg 517
              ||||||||||||||||||||
Sbjct: 176671 ttgtggttgtcttccttttg 176690
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>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence
          Length = 216271

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 72386 gtgtcaacttgacacagcag 72405
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>gb|AC116776.12| Mus musculus chromosome 3, clone RP24-472H5, complete sequence
          Length = 170076

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   ttgtggttgtcttccttttg 517
             ||||||||||||||||||||
Sbjct: 82657 ttgtggttgtcttccttttg 82638
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>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence
          Length = 131587

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 61024 gtgtcaacttgacacagcag 61005
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>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 11601 gtgtcaacttgacacagcag 11620
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    gcacttatcacatgttcatg 415
              ||||||||||||||||||||
Sbjct: 508054 gcacttatcacatgttcatg 508073
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>gb|AC122302.4| Mus musculus BAC clone RP23-276E10 from chromosome 12, complete sequence
          Length = 172985

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 162397 gtgtcaacttgacacagcag 162416
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>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence
          Length = 216751

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 122695 gtgtcaacttgacacagcag 122676
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>gb|AC093360.7| Mus musculus chromosome 3, clone RP23-57F18, complete sequence
          Length = 275076

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 495    atgttgtggttgtcttccttttgcaaaa 522
              ||||||||||||| ||||||||| ||||
Sbjct: 178882 atgttgtggttgtgttccttttgaaaaa 178909
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>emb|CT025689.6| Mouse DNA sequence from clone RP24-236L7 on chromosome 14, complete
             sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 95338 gtgtcaacttgacacagcag 95357
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>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence
          Length = 194243

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    cacatgttcatgattggcct 423
              ||||||||||||||||||||
Sbjct: 144827 cacatgttcatgattggcct 144808
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>gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosome 18, complete
             sequence
          Length = 140817

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 90872 gtgtcaacttgacacagcag 90853
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>ref|XM_800962.1| Trypanosoma cruzi strain CL Brener proline oxidase
           (Tc00.1047053506411.30) partial mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 431 ctcgcgctcttcttctgtga 450
           ||||||||||||||||||||
Sbjct: 948 ctcgcgctcttcttctgtga 929
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>gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome 3, complete sequence
          Length = 200490

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 495    atgttgtggttgtcttccttttgcaaaa 522
              ||||||||||||| ||||||||| ||||
Sbjct: 155160 atgttgtggttgtgttccttttgaaaaa 155133
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>gb|AC121804.3| Mus musculus BAC clone RP23-442I5 from chromosome 12, complete sequence
          Length = 199938

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    agtgtcaacttgacacagca 74
             ||||||||||||||||||||
Sbjct: 83176 agtgtcaacttgacacagca 83157
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>ref|XM_547747.2| PREDICTED: Canis familiaris similar to CG10889-PA (LOC490625), mRNA
          Length = 7350

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  cttctgctgtcccttcccag 372
            ||||||||||||||||||||
Sbjct: 5551 cttctgctgtcccttcccag 5570
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>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 236028 gtgtcaacttgacacagcag 236047
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>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 71492 gtgtcaacttgacacagcag 71473
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>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence
          Length = 201487

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 177511 gtgtcaacttgacacagcag 177492
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>emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chromosome 9q34.11-34.3
             Contains the 5' end of the FNBP1 gene for formin binding
             protein 1 (FBP17), the GPR107 gene for G protein-coupled
             receptor 107 (LUSTR1) and three CpG islands, complete
             sequence
          Length = 127883

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tttcttctgctgtcccttcc 369
             ||||||||||||||||||||
Sbjct: 76730 tttcttctgctgtcccttcc 76711
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>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ataaactaaaccaagcataa 134
              ||||||||||||||||||||
Sbjct: 286089 ataaactaaaccaagcataa 286070
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>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     cttacaaaatgagaaattcc 35
              ||||||||||||||||||||
Sbjct: 143280 cttacaaaatgagaaattcc 143299
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>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    cttacaaaatgagaaattcc 35
             ||||||||||||||||||||
Sbjct: 96810 cttacaaaatgagaaattcc 96829
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>gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, complete sequence
          Length = 203171

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    atagaaacaacaaatgccct 322
              ||||||||||||||||||||
Sbjct: 151666 atagaaacaacaaatgccct 151647
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>gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosome 12, complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 159396 gtgtcaacttgacacagcag 159415
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>ref|NM_001027888.1| Caenorhabditis elegans C42C1.4a (C42C1.4) mRNA, complete cds
          Length = 3958

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 472  attcacttccatctttctct 491
            ||||||||||||||||||||
Sbjct: 2110 attcacttccatctttctct 2091
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>gb|AC106895.5| Homo sapiens BAC clone RP11-161D15 from 4, complete sequence
          Length = 135450

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   tgttgtggttgtcttccttt 515
             ||||||||||||||||||||
Sbjct: 17589 tgttgtggttgtcttccttt 17608
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>gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome 6, complete sequence
          Length = 192598

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 85639 gtgtcaacttgacacagcag 85620
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>gb|AC024590.8| Homo sapiens chromosome 16 clone RP11-487C14, complete sequence
          Length = 180701

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   ttatcacatgttcatgattg 419
             ||||||||||||||||||||
Sbjct: 52482 ttatcacatgttcatgattg 52463
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>gb|AC009483.3|AC009483 Homo sapiens BAC clone RP11-303H5 from 2, complete sequence
          Length = 206589

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   atagaaacaacaaatgccct 322
             ||||||||||||||||||||
Sbjct: 84409 atagaaacaacaaatgccct 84390
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>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds
          Length = 17522

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   gtgtcaacttgacacagcag 75
            ||||||||||||||||||||
Sbjct: 8249 gtgtcaacttgacacagcag 8230
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>emb|AL929373.15| Mouse DNA sequence from clone RP23-31K16 on chromosome 4, complete
             sequence
          Length = 169690

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 89630 gtgtcaacttgacacagcag 89649
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>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete
              sequence
          Length = 365612

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     cttacaaaatgagaaattcc 35
              ||||||||||||||||||||
Sbjct: 276172 cttacaaaatgagaaattcc 276191
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>gb|AF043695.2| Caenorhabditis elegans cosmid C42C1, complete sequence
          Length = 44686

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   attcacttccatctttctct 491
             ||||||||||||||||||||
Sbjct: 14255 attcacttccatctttctct 14274
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>gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202_H_3, complete sequence
          Length = 187174

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tttcttctgctgtcccttcc 369
             ||||||||||||||||||||
Sbjct: 28738 tttcttctgctgtcccttcc 28719
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>gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone rp23-430i3, complete
              sequence
          Length = 183540

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 145151 gtgtcaacttgacacagcag 145132
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>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence
          Length = 232792

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 231809 gtgtcaacttgacacagcag 231828
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>emb|BX005053.5| Mouse DNA sequence from clone RP23-35D18 on chromosome 4, complete
              sequence
          Length = 186734

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 177016 gtgtcaacttgacacagcag 176997
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>gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, complete sequence
          Length = 176663

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 150579 gtgtcaacttgacacagcag 150560
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>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gtgtcaacttgacacagcag 75
             ||||||||||||||||||||
Sbjct: 75080 gtgtcaacttgacacagcag 75099
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>gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, complete sequence
          Length = 206973

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 135006 gtgtcaacttgacacagcag 134987
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>gb|AC149220.3| Mus musculus BAC clone RP23-412J12 from 7, complete sequence
          Length = 172077

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gtgtcaacttgacacagcag 75
              ||||||||||||||||||||
Sbjct: 106018 gtgtcaacttgacacagcag 105999
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>emb|AL840637.9| Mouse DNA sequence from clone RP23-113H3 on chromosome 2, complete
              sequence
          Length = 217829

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    ttgtggttgtcttccttttg 517
              ||||||||||||||||||||
Sbjct: 169189 ttgtggttgtcttccttttg 169208
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>emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on chromosome X, complete
             sequence
          Length = 192252

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   ttgtggttgtcttccttttg 517
             ||||||||||||||||||||
Sbjct: 14102 ttgtggttgtcttccttttg 14083
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>emb|AL732456.6| Mouse DNA sequence from clone RP23-405D18 on chromosome X, complete
              sequence
          Length = 136482

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    ttgtggttgtcttccttttg 517
              ||||||||||||||||||||
Sbjct: 133207 ttgtggttgtcttccttttg 133188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,466,953
Number of Sequences: 3902068
Number of extensions: 7466953
Number of successful extensions: 186316
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 185982
Number of HSP's gapped (non-prelim): 334
length of query: 703
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 680
effective length of database: 17,143,297,704
effective search space: 11657442438720
effective search space used: 11657442438720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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