ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35o14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009556.1| Triticum aestivum clone wre1.pk0004.c7:fis, full ... 480 e-132
2gb|AF031194.1|AF031194 Triticum aestivum S276 (S276) mRNA, compl... 450 e-123
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
4dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5dbj|AK058543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
6gb|AY103762.1| Zea mays PCO087385 mRNA sequence 147 5e-32
7gb|AF406816.1| Aquilegia vulgaris sphingolipid long chain base d... 54 6e-04
8gb|AY169402.1| Camellia sinensis delta-6-desaturase (D6DES) mRNA... 50 0.009
9gb|AY234124.1| Primula farinosa sphingolipid delta-8 desaturase ... 48 0.036
10gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete ... 46 0.14
11gb|BC084515.1| Xenopus tropicalis calmodulin-like 4, mRNA (cDNA ... 44 0.57
12ref|NM_001011117.1| Xenopus tropicalis calmodulin-like 4 (calml4... 44 0.57
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
14dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
15gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosom... 42 2.2
16emb|AL138813.8| Human DNA sequence from clone RP1-305K11 on chro... 42 2.2
17emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 42 2.2
18gb|AC152920.17| Medicago truncatula clone mth2-101o15, complete ... 42 2.2
19gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, c... 42 2.2
20gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, c... 42 2.2
21gb|AF005096.1|AF005096 Ricinus communis desaturase/cytochrome b5... 42 2.2
22gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complet... 42 2.2
23gb|BC056765.1| Danio rerio zgc:63476, mRNA (cDNA clone MGC:63476... 40 8.9
24gb|AF536526.1| Anemone leveillei delta-8-sphingolipid desaturase... 40 8.9
25ref|NM_213528.1| Danio rerio zgc:63476 (zgc:63476), mRNA 40 8.9
26dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, ... 40 8.9
27gb|DQ120086.1| Picea glauca putative intracellular pathogenesis-... 40 8.9
28gb|DQ120085.1| Picea mariana putative intracellular pathogenesis... 40 8.9
29gb|DQ120084.1| Picea abies putative intracellular pathogenesis-r... 40 8.9
30gb|DQ120072.1| Picea glauca putative intracellular pathogenesis-... 40 8.9
31gb|AY234126.1| Primula vialii sphingolipid delta-8 desaturase mR... 40 8.9
32emb|BX572626.6| Mouse DNA sequence from clone RP24-408L19 on chr... 40 8.9
33dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
34gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome... 40 8.9 
>gb|BT009556.1| Triticum aestivum clone wre1.pk0004.c7:fis, full insert mRNA sequence
          Length = 1972

 Score =  480 bits (242), Expect = e-132
 Identities = 327/352 (92%), Gaps = 3/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aacgtttattattggaatcgtn-tgtttccnaaacgcagttcaagctgccatagcagcag 59
            |||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||||
Sbjct: 1942 aacgtttattattggaatcgtcatgttcccaaaatgcagttcaagctgccatagcagcag 1883

                                                                        
Query: 60   gatatacatgctaccaaccatcaattgagtttacattttcatgaacttgcaagcaaaatg 119
            |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1882 gatatacacgctacaaaccatcaattgagtttacagtttcatgaacttgcaagcaaaatg 1823

                                                                        
Query: 120  aaatgggtgtaaagataagccacggatct-atgatataaatcaagtaccattgataatag 178
            |||||| |||||||||||||||||||| | ||||| |||||||||||| ||||||  |||
Sbjct: 1822 aaatggatgtaaagataagccacggattttatgatgtaaatcaagtactattgatg-tag 1764

                                                                        
Query: 179  ttaccgtgatagggagaacccaataatctaaatatggtgtacaagtacacaactgaagca 238
            ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1763 ttaccatgatagggagaacccaacaatctaaatatggtgtacaagtacacaactgaagca 1704

                                                                        
Query: 239  tgaacccacgattgaactgcaaagatagtcatttggtaacacgaaaaatccaacacgact 298
            |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| |
Sbjct: 1703 tgaacccacgattgaactgcaaagatagtcacctggcaacacgaaaaatccaacacgatt 1644

                                                                
Query: 299  ccaacagctaaatagatcaatctctctatgcaatcgagaagcaatcagataa 350
            ||||||||||||  ||||||| |||||| |||||||||||||||||||||||
Sbjct: 1643 ccaacagctaaaaggatcaatatctctacgcaatcgagaagcaatcagataa 1592



 Score =  480 bits (242), Expect = e-132
 Identities = 275/286 (96%)
 Strand = Plus / Minus

                                                                        
Query: 365  caattgtgtcatactccagtcctgatcccagtcatccatgggtgttcaaagcttcccaga 424
            ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1564 caattgtctcatactccagtcctgatcccagtcatccatgagtgttcaaagcttcccaga 1505

                                                                        
Query: 425  ccagattcttgggcgcagatccagtagtggcgtccctggcctgcaatgctgcagccctta 484
            |||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1504 ccagattctttggagcagctccagtagtggcttccctggcctgcaatgctgcagccctta 1445

                                                                        
Query: 485  gcgtcttccatgtcattacatttgcctcccagaatgtggcagcaccataagacagcccgt 544
            |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1444 gcgtcttccatgtcattacatttgcctcccagaatgtggcggcaccataagacagcccat 1385

                                                                        
Query: 545  gcttcttgcaaaggtcgcgcacaatcggcgcgaccatcctatagtggcaccgaggcaggc 604
            |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1384 gcttcttgcaaaggtcacgcacaatcggcgcgaccatcctatagtggcagcgaggcaggc 1325

                                                          
Query: 605  ggggaaacaaatggtgttcaacctggaactgcagaccaccatggaa 650
            | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 gaggaaacaaatggtgttcaacctggaactgcagaccaccatggaa 1279
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>gb|AF031194.1|AF031194 Triticum aestivum S276 (S276) mRNA, complete cds
          Length = 1788

 Score =  450 bits (227), Expect = e-123
 Identities = 282/299 (94%), Gaps = 1/299 (0%)
 Strand = Plus / Minus

                                                                        
Query: 353  gctcgaccctagcaattgtgtcatactccagtcctgatccc-agtcatccatgggtgttc 411
            ||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1574 gctcgacgctagcaattgtctcatactccagtcctgatccccagtcatccatgagtgttc 1515

                                                                        
Query: 412  aaagcttcccagaccagattcttgggcgcagatccagtagtggcgtccctggcctgcaat 471
            |||||||||||||||| |||||| || ||||  ||||||||||| |||||||||||||||
Sbjct: 1514 aaagcttcccagaccaaattcttcggagcagccccagtagtggcttccctggcctgcaat 1455

                                                                        
Query: 472  gctgcagcccttagcgtcttccatgtcattacatttgcctcccagaatgtggcagcacca 531
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 gctgcagcccgtagcgtcttccatgtcattacatttgcctcccagaatgtggcagcacca 1395

                                                                        
Query: 532  taagacagcccgtgcttcttgcaaaggtcgcgcacaatcggcgcgaccatcctatagtgg 591
            ||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||
Sbjct: 1394 taagacagcccgtgcttcttgcaaaggtcacgcacaattggtgcgaccattctatagtgg 1335

                                                                       
Query: 592  caccgaggcaggcggggaaacaaatggtgttcaacctggaactgcagaccaccatggaa 650
            || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 cagcgaggcaggcgaggaaacaaatggtgttcaacctggaactgcagaccaccatggaa 1276



 Score =  270 bits (136), Expect = 5e-69
 Identities = 185/200 (92%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                        
Query: 151  gatataaatcaagtaccattgataatagttaccgtgatagggagaacccaataatctaaa 210
            |||||||||||||||| ||||||  |||||||| ||||||||||||||||| ||||||||
Sbjct: 1788 gatataaatcaagtactattgatg-tagttaccatgatagggagaacccaacaatctaaa 1730

                                                                        
Query: 211  tatggtgtacaagtacacaactgaagcatgaacccacgattgaactgcaaagatagtcat 270
            |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| 
Sbjct: 1729 tatggtgtacaagtacacaactgaagcatgaatccacaattgaactgcaaagatagtcac 1670

                                                                        
Query: 271  ttggtaacacgaaaaatccaacacgactccaacagctaaatagatcaatctctctatgca 330
             ||| ||||||||||||||||||||| |||||||||||||  ||||||| |||||| |||
Sbjct: 1669 ctggcaacacgaaaaatccaacacgattccaacagctaaaaggatcaatatctctacgca 1610

                                
Query: 331  atcgagaagcaatcagataa 350
            ||||||||||||||||||||
Sbjct: 1609 atcgagaagcaatcagataa 1590
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Minus

                                                                            
Query: 396      tcatccatgggtgttcaaagcttcccagaccagattcttgggcgcagatccagtagtggc 455
                ||||||||| ||||||| ||||||||| |||| |||||| |||||||  ||| |||||||
Sbjct: 10287217 tcatccatgagtgttcacagcttcccaaaccaaattctttggcgcagcaccactagtggc 10287158

                                                                            
Query: 456      gtccctggcctgcaatgctgcagcccttagcgtcttccatgtcattacatttgcctccca 515
                 | ||||||||||||||| |||||||| |  |||||||||||||  ||||| |||| |||
Sbjct: 10287157 tttcctggcctgcaatgcagcagccctcaatgtcttccatgtcaacacattagcctgcca 10287098

                                                                            
Query: 516      gaatgtggcagcaccataagacagcccgtgcttcttgcaaaggtcgcgcacaatcggcgc 575
                ||| | ||| ||  |||||| |||||| ||||||||||||||||| || ||||  |||| 
Sbjct: 10287097 gaacgaggcggcggcataaggcagcccatgcttcttgcaaaggtcacgaacaaatggcga 10287038

                                                                            
Query: 576      gaccatcctatagtggcaccgaggcaggcggggaaacaaatggtgttcaacctggaactg 635
                 ||| |||||  ||||||||| || ||||| ||||||| |||||| || |  ||||||||
Sbjct: 10287037 aaccttcctaaggtggcaccgcgggaggcgaggaaacagatggtgctcgatttggaactg 10286978

                               
Query: 636      cagaccaccatggaa 650
                ||| ||||| |||||
Sbjct: 10286977 caggccaccgtggaa 10286963
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>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1118_A10
          Length = 95161

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Minus

                                                                         
Query: 396   tcatccatgggtgttcaaagcttcccagaccagattcttgggcgcagatccagtagtggc 455
             ||||||||| ||||||| ||||||||| |||| |||||| |||||||  ||| |||||||
Sbjct: 88366 tcatccatgagtgttcacagcttcccaaaccaaattctttggcgcagcaccactagtggc 88307

                                                                         
Query: 456   gtccctggcctgcaatgctgcagcccttagcgtcttccatgtcattacatttgcctccca 515
              | ||||||||||||||| |||||||| |  |||||||||||||  ||||| |||| |||
Sbjct: 88306 tttcctggcctgcaatgcagcagccctcaatgtcttccatgtcaacacattagcctgcca 88247

                                                                         
Query: 516   gaatgtggcagcaccataagacagcccgtgcttcttgcaaaggtcgcgcacaatcggcgc 575
             ||| | ||| ||  |||||| |||||| ||||||||||||||||| || ||||  |||| 
Sbjct: 88246 gaacgaggcggcggcataaggcagcccatgcttcttgcaaaggtcacgaacaaatggcga 88187

                                                                         
Query: 576   gaccatcctatagtggcaccgaggcaggcggggaaacaaatggtgttcaacctggaactg 635
              ||| |||||  ||||||||| || ||||| ||||||| |||||| || |  ||||||||
Sbjct: 88186 aaccttcctaaggtggcaccgcgggaggcgaggaaacagatggtgctcgatttggaactg 88127

                            
Query: 636   cagaccaccatggaa 650
             ||| ||||| |||||
Sbjct: 88126 caggccaccgtggaa 88112
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>dbj|AK058543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B11, full
            insert sequence
          Length = 1798

 Score =  157 bits (79), Expect = 5e-35
 Identities = 211/255 (82%)
 Strand = Plus / Minus

                                                                        
Query: 396  tcatccatgggtgttcaaagcttcccagaccagattcttgggcgcagatccagtagtggc 455
            ||||||||| ||||||| ||||||||| |||| |||||| |||||||  ||| |||||||
Sbjct: 1511 tcatccatgagtgttcacagcttcccaaaccaaattctttggcgcagcaccactagtggc 1452

                                                                        
Query: 456  gtccctggcctgcaatgctgcagcccttagcgtcttccatgtcattacatttgcctccca 515
             | ||||||||||||||| |||||||| |  |||||||||||||  ||||| |||| |||
Sbjct: 1451 tttcctggcctgcaatgcagcagccctcaatgtcttccatgtcaacacattagcctgcca 1392

                                                                        
Query: 516  gaatgtggcagcaccataagacagcccgtgcttcttgcaaaggtcgcgcacaatcggcgc 575
            ||| | ||| ||  |||||| |||||| ||||||||||||||||| || ||||  |||| 
Sbjct: 1391 gaacgaggcggcggcataaggcagcccatgcttcttgcaaaggtcacgaacaaatggcga 1332

                                                                        
Query: 576  gaccatcctatagtggcaccgaggcaggcggggaaacaaatggtgttcaacctggaactg 635
             ||| |||||  ||||||||| || ||||| ||||||| |||||| || |  ||||||||
Sbjct: 1331 aaccttcctaaggtggcaccgcgggaggcgaggaaacagatggtgctcgatttggaactg 1272

                           
Query: 636  cagaccaccatggaa 650
            ||| ||||| |||||
Sbjct: 1271 caggccaccgtggaa 1257
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>gb|AY103762.1| Zea mays PCO087385 mRNA sequence
          Length = 1764

 Score =  147 bits (74), Expect = 5e-32
 Identities = 215/262 (82%)
 Strand = Plus / Minus

                                                                        
Query: 389  atcccagtcatccatgggtgttcaaagcttcccagaccagattcttgggcgcagatccag 448
            |||||| | ||||||||||||||| ||| ||||| |||| |||||| || |||   ||| 
Sbjct: 1484 atcccatttatccatgggtgttcacagcctcccataccaaattcttcggagcaccaccac 1425

                                                                        
Query: 449  tagtggcgtccctggcctgcaatgctgcagcccttagcgtcttccatgtcattacatttg 508
            | || |||  ||||||||||||||| |||||||| || ||||||||||| |  |||||||
Sbjct: 1424 ttgtagcggtcctggcctgcaatgcagcagccctgagtgtcttccatgtaagcacatttg 1365

                                                                        
Query: 509  cctcccagaatgtggcagcaccataagacagcccgtgcttcttgcaaaggtcgcgcacaa 568
            |  ||||||||||||| |||  |||||  ||||| |||||||||||||||||||| ||  
Sbjct: 1364 caccccagaatgtggctgcagaataagtgagcccatgcttcttgcaaaggtcgcggacgg 1305

                                                                        
Query: 569  tcggcgcgaccatcctatagtggcaccgaggcaggcggggaaacaaatggtgttcaacct 628
             ||| || ||| | | |  |||||||||||| ||||||||||||| |||||| |||| ||
Sbjct: 1304 ccggtgcaaccttgcgaaggtggcaccgaggtaggcggggaaacagatggtgctcaatct 1245

                                  
Query: 629  ggaactgcagaccaccatggaa 650
            |||||||||| ||||| |||||
Sbjct: 1244 ggaactgcaggccaccgtggaa 1223



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 175  atagttaccgtgatagggagaac 197
            |||||||||||||||||||||||
Sbjct: 1700 atagttaccgtgatagggagaac 1678
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>gb|AF406816.1| Aquilegia vulgaris sphingolipid long chain base delta 8 desaturase
            mRNA, complete cds
          Length = 1341

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 400  ccatgggtgttcaaagcttcccagaccagattctt 434
            ||||||||||| | |||||||||||||||||||||
Sbjct: 1337 ccatgggtgttaacagcttcccagaccagattctt 1303



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 589  tggcaccgaggcaggcggggaaacaaatggtgttcaacctggaactgcagaccaccatg 647
            |||||||||||||  || || |||||||| || |||||||| || ||||| ||||||||
Sbjct: 1151 tggcaccgaggcaatcgagggaacaaatgatgctcaacctgaaattgcagtccaccatg 1093
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>gb|AY169402.1| Camellia sinensis delta-6-desaturase (D6DES) mRNA, complete cds
          Length = 1501

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 595  cgaggcaggcggggaaacaaatggtgttcaacctggaactgcagaccaccatg 647
            |||||||  ||||||||||||||||| |||| ||| |||||||  ||||||||
Sbjct: 1206 cgaggcaatcggggaaacaaatggtgctcaatctgaaactgcaatccaccatg 1154
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>gb|AY234124.1| Primula farinosa sphingolipid delta-8 desaturase mRNA, complete cds
          Length = 1681

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 400  ccatgggtgttcaaagcttcccagaccagattcttgggcg 439
            ||||||||||||| ||||||||| |||| |||||| ||||
Sbjct: 1407 ccatgggtgttcacagcttcccaaaccaaattcttcggcg 1368
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>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 607   ggaaacaaatggtgttcaacctggaactgcagaccacca 645
             ||||||||||| ||||||| ||| ||||||| |||||||
Sbjct: 93801 ggaaacaaatgatgttcaagctgaaactgcaaaccacca 93839
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>gb|BC084515.1| Xenopus tropicalis calmodulin-like 4, mRNA (cDNA clone MGC:89706
           IMAGE:7026718), complete cds
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  agctgccatagcagcaggatat 64
           ||||||||||||||||||||||
Sbjct: 199 agctgccatagcagcaggatat 220
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>ref|NM_001011117.1| Xenopus tropicalis calmodulin-like 4 (calml4), mRNA
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  agctgccatagcagcaggatat 64
           ||||||||||||||||||||||
Sbjct: 199 agctgccatagcagcaggatat 220
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 99       catgaacttgcaagcaaaatga 120
                ||||||||||||||||||||||
Sbjct: 15300740 catgaacttgcaagcaaaatga 15300761
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>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0063K04
          Length = 158792

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     catgaacttgcaagcaaaatga 120
              ||||||||||||||||||||||
Sbjct: 111861 catgaacttgcaagcaaaatga 111882
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>gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosome 8, complete sequence
          Length = 209062

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 391   cccagtcatccatgggtgttcaaag 415
             |||||||||| ||||||||||||||
Sbjct: 25796 cccagtcatcaatgggtgttcaaag 25772
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>emb|AL138813.8| Human DNA sequence from clone RP1-305K11 on chromosome 11p13-14.2
             Contains STSs and GSSs, complete sequence
          Length = 76738

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    aattgagtttacattttcatg 102
             |||||||||||||||||||||
Sbjct: 46226 aattgagtttacattttcatg 46206
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 487    gtcttccatgtcattacattt 507
              |||||||||||||||||||||
Sbjct: 192907 gtcttccatgtcattacattt 192927
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>gb|AC152920.17| Medicago truncatula clone mth2-101o15, complete sequence
          Length = 124934

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 607   ggaaacaaatggtgttcaacctggaactgcagaccaccatg 647
             ||||||||||| || |||| ||| ||||||| |||||||||
Sbjct: 63056 ggaaacaaatgatgctcaatctgaaactgcaaaccaccatg 63016
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>gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, complete sequence
          Length = 158915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     aattgagtttacattttcatg 102
              |||||||||||||||||||||
Sbjct: 149237 aattgagtttacattttcatg 149217
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>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence
          Length = 177308

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   agaacccaataatctaaatat 213
             |||||||||||||||||||||
Sbjct: 66792 agaacccaataatctaaatat 66812
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>gb|AF005096.1|AF005096 Ricinus communis desaturase/cytochrome b5 protein mRNA, complete cds
          Length = 1856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 610  aacaaatggtgttcaacctggaactgcagaccaccatggaa 650
            ||||||||||| || | |||||||||||  |||||||||||
Sbjct: 1271 aacaaatggtgctccatctggaactgcaatccaccatggaa 1231
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>gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complete sequence
          Length = 179287

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 391   cccagtcatccatgggtgttcaaag 415
             |||||||||| ||||||||||||||
Sbjct: 28167 cccagtcatcaatgggtgttcaaag 28191
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>gb|BC056765.1| Danio rerio zgc:63476, mRNA (cDNA clone MGC:63476 IMAGE:2600826),
            complete cds
          Length = 2262

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 445  ccagtagtggcgtccctggc 464
            ||||||||||||||||||||
Sbjct: 1835 ccagtagtggcgtccctggc 1816
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>gb|AF536526.1| Anemone leveillei delta-8-sphingolipid desaturase mRNA, complete cds
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 406  gtgttcaaagcttcccagaccagattcttggg 437
            ||||| || ||||||||||||| |||||||||
Sbjct: 1331 gtgttgaaggcttcccagaccaaattcttggg 1300
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>ref|NM_213528.1| Danio rerio zgc:63476 (zgc:63476), mRNA
          Length = 2262

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 445  ccagtagtggcgtccctggc 464
            ||||||||||||||||||||
Sbjct: 1835 ccagtagtggcgtccctggc 1816
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>dbj|AB232919.1| Oryzias latipes hox gene cluster, complete cds, contains hoxAb
          Length = 240727

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   aagccacggatctatgatataaat 159
             |||||| |||||||||||||||||
Sbjct: 78498 aagccatggatctatgatataaat 78521
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>gb|DQ120086.1| Picea glauca putative intracellular pathogenesis-related protein
           (m007d) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 atggtgtacaagtacacaac 231
           ||||||||||||||||||||
Sbjct: 378 atggtgtacaagtacacaac 397
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>gb|DQ120085.1| Picea mariana putative intracellular pathogenesis-related protein
           (m007d) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 atggtgtacaagtacacaac 231
           ||||||||||||||||||||
Sbjct: 378 atggtgtacaagtacacaac 397
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>gb|DQ120084.1| Picea abies putative intracellular pathogenesis-related protein
           (m007d) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 atggtgtacaagtacacaac 231
           ||||||||||||||||||||
Sbjct: 378 atggtgtacaagtacacaac 397
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>gb|DQ120072.1| Picea glauca putative intracellular pathogenesis-related protein
           (m007d) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 atggtgtacaagtacacaac 231
           ||||||||||||||||||||
Sbjct: 378 atggtgtacaagtacacaac 397
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>gb|AY234126.1| Primula vialii sphingolipid delta-8 desaturase mRNA, complete cds
          Length = 1385

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 403  tgggtgttcaaagcttcccagaccagattctt 434
            ||||||||||  |||||||| |||||||||||
Sbjct: 1378 tgggtgttcacggcttcccaaaccagattctt 1347
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>emb|BX572626.6| Mouse DNA sequence from clone RP24-408L19 on chromosome X, complete
              sequence
          Length = 155849

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    taatctaaatatggtgtacaagta 225
              ||||||||||||||||| ||||||
Sbjct: 137387 taatctaaatatggtgttcaagta 137364
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>dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-681H10, complete
             sequence
          Length = 158577

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agtttacattttcatgaact 106
             ||||||||||||||||||||
Sbjct: 90557 agtttacattttcatgaact 90538
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>gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome 14, complete sequence
          Length = 195329

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gagtttacattttcatgaac 105
             ||||||||||||||||||||
Sbjct: 82445 gagtttacattttcatgaac 82464


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,228,987
Number of Sequences: 3902068
Number of extensions: 5228987
Number of successful extensions: 96095
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95978
Number of HSP's gapped (non-prelim): 112
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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