| Clone Name | rbags35o13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105049.1| Zea mays PCO112338 mRNA sequence Length = 1250 Score = 383 bits (193), Expect = e-103 Identities = 280/309 (90%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 1027 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 968 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 967 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 908 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 907 caatgattgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 848 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| || || ||||| || |||||||||||||||| Sbjct: 847 tcttcacagaaattatgtcaaggttgaaagtgcacttcagctctgggtgagtcacatgag 788 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 | |||||||||||||||||||| || || ||||||| ||||||||||||||| ||||||| Sbjct: 787 ctttggtgaaacgcagaccagttggccgaatgaaccgctcatactttggtggtttccttg 728 Query: 513 taaatccag 521 ||||||||| Sbjct: 727 taaatccag 719
>gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence Length = 1151 Score = 359 bits (181), Expect = 6e-96 Identities = 277/309 (89%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 |||| ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 936 acactagcaaaactgcattgatacagccatcgttctccgggttgtttgtaacttgagcat 877 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 876 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 817 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 816 caatgatcgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 757 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| || || ||||| || |||||||||||||||| Sbjct: 756 tcttcacagaaattatgtcaaggttgaaagtgcacttcagctctgggtgagtcacatgag 697 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 | |||||||||||||||||||| || || ||||||| |||||||||||||| ||||||| Sbjct: 696 ctttggtgaaacgcagaccagttggccgaatgaaccgttcatactttggtggtttccttg 637 Query: 513 taaatccag 521 ||||||||| Sbjct: 636 taaatccag 628
>ref|XM_479475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1039 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 593 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 592 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 533 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 532 taaacccagg 523
>ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA Length = 1041 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 593 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 592 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 533 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 532 taaacccagg 523
>ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA Length = 1227 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 835 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 776 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 775 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 716 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 715 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 656 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 655 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 596 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 595 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 536 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 535 taaacccagg 526
>dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G01, full insert sequence Length = 1039 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 593 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 592 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 533 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 532 taaacccagg 523
>dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136C23, full insert sequence Length = 1225 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 833 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 774 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 773 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 714 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 713 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 654 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 653 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 594 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 593 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 534 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 533 taaacccagg 524
>gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence Length = 1191 Score = 337 bits (170), Expect = 2e-89 Identities = 277/310 (89%), Gaps = 2/310 (0%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 940 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 881 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 880 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 821 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || |||| |||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 820 caatgattggtccccttgtcataacaccaagagaagtgtacatcggaccatttgggtttt 761 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| ||| |||| || || |||||||| ||| |||||||||||| Sbjct: 760 tcttcacagaaattatgtcaagggtgaaagtgcacttcagttctgggggagtcacatgag 701 Query: 453 cctt-ggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 511 |||| |||||| |||| |||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 700 cctttggtgaa-cgcataccagttggtcgaatgaaccgctcatactttggtggtttcctt 642 Query: 512 gtaaatccag 521 |||||||||| Sbjct: 641 gtaaatccag 632
>dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H11, full insert sequence Length = 1041 Score = 337 bits (170), Expect = 2e-89 Identities = 275/310 (88%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 273 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 333 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 392 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 393 tcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgag 452 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatggg 593 Query: 453 ccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttg 512 |||| |||||||| || ||||| || | || |||| |||||||||||||| ||||||| Sbjct: 592 cctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttg 533 Query: 513 taaatccagg 522 |||| ||||| Sbjct: 532 taaacccagg 523
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Plus Query: 341 gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 400 |||||||| |||| ||||||||||| || ||||||| |||| |||||||||||||||||| Sbjct: 28395867 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 28395926 Query: 401 gaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtg 460 ||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 28395927 gaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatgggcctttgtg 28395986 Query: 461 aaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcca 520 ||||| || ||||| || | || |||| |||||||||||||| ||||||||||| ||| Sbjct: 28395987 aaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccca 28396046 Query: 521 gg 522 || Sbjct: 28396047 gg 28396048 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 278 ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 28395523 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 28395577 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 264 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 28395371 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 28395422
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 178 bits (90), Expect = 1e-41 Identities = 159/182 (87%) Strand = Plus / Plus Query: 341 gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 400 |||||||| |||| ||||||||||| || ||||||| |||| |||||||||||||||||| Sbjct: 121430 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 121489 Query: 401 gaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtg 460 ||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 121490 gaaattatgtcaaggttgaaagtacatttcagctcagggtgagtaacatgggcctttgtg 121549 Query: 461 aaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcca 520 ||||| || ||||| || | || |||| |||||||||||||| ||||||||||| ||| Sbjct: 121550 aaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccca 121609 Query: 521 gg 522 || Sbjct: 121610 gg 121611 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 278 ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 332 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 121086 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 121140 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 264 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 120934 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 120985
>emb|BX831560.1|CNS09ZPB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1012 Score = 145 bits (73), Expect = 2e-31 Identities = 238/293 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 822 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 763 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 762 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 703 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 702 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 643 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 642 atgatctcgagacagaaagtgcattttagttcagggtgagtaacgtgggccttggtgaaa 583 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaa 516 || ||||||| || |||||||| | ||| |||||||| |||||||||||||| Sbjct: 582 cgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgtaaa 530
>ref|NM_120719.2| Arabidopsis thaliana structural constituent of ribosome AT5G06360 mRNA, complete cds Length = 1059 Score = 139 bits (70), Expect = 1e-29 Identities = 235/290 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 834 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 775 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 774 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 715 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 714 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 655 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 654 atgatctcgagacagaaagtgcattttagttcagggtgagtgacgtgggccttggtgaaa 595 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 || ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 594 cgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 545
>gb|AY114052.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds Length = 814 Score = 139 bits (70), Expect = 1e-29 Identities = 235/290 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 770 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 711 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 710 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 651 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 650 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 591 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 590 atgatctcgagacagaaagtgcattttagttcagggtgagtgacgtgggccttggtgaaa 531 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 || ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 530 cgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 481
>gb|AY059725.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds Length = 999 Score = 139 bits (70), Expect = 1e-29 Identities = 235/290 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 645 atgatctcgagacagaaagtgcattttagttcagggtgagtgacgtgggccttggtgaaa 586 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 || ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 585 cgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536
>emb|BX831075.1|CNS09ZF5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 983 Score = 139 bits (70), Expect = 1e-29 Identities = 235/290 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 645 atgatctcgagacagaaagtgcattttagttcagggtgagtgacgtgggccttggtgaaa 586 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 || ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 585 cgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536
>gb|AY085454.1| Arabidopsis thaliana clone 15229 mRNA, complete sequence Length = 1056 Score = 139 bits (70), Expect = 1e-29 Identities = 235/290 (81%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 831 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 772 Query: 284 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 343 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 771 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 712 Query: 344 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 403 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 711 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 652 Query: 404 attatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaa 463 || || ||||| ||| || ||||| |||||||||||||| || || |||||||||||| Sbjct: 651 atgatctcgagacagaaagtgcattttagttcagggtgagtgacgtgggccttggtgaaa 592 Query: 464 cgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 || ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 591 cgaagaccagatgggcggatgaaacgctcgtactttggaggcttccttgt 542
>dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjB06D23, BM0787, complete sequence Length = 102734 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 328 cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 387 |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || || Sbjct: 55302 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 55361 Query: 388 gtttttcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcac 447 |||||||||||| |||||| || || ||||| || ||||| ||||| || ||||| || Sbjct: 55362 gtttttcttcactccaattatttctagattgaatgtgcatttaagttctggatgagtgac 55421 Query: 448 atgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggctt 507 |||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || || Sbjct: 55422 atgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggttt 55481 Query: 508 ccttgtaaatccagg 522 || ||||| ||||| Sbjct: 55482 tctagtaaaaccagg 55496 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 218 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 270 |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 55008 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 55060 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 278 ccccaaacaacttttccagcaggggttacgagaccaagttcact 321 ||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 55159 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 55202
>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a, complete sequence Length = 95559 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 328 cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 387 |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || || Sbjct: 20417 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 20476 Query: 388 gtttttcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcac 447 |||||||||||| |||||| || || ||||| || ||||| ||||| || ||||| || Sbjct: 20477 gtttttcttcactccaattatttctagattgaatgtgcatttaagttctggatgagtgac 20536 Query: 448 atgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggctt 507 |||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || || Sbjct: 20537 atgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggttt 20596 Query: 508 ccttgtaaatccagg 522 || ||||| ||||| Sbjct: 20597 tctagtaaaaccagg 20611 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 218 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 270 |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 20123 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 20175 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 278 ccccaaacaacttttccagcaggggttacgagaccaagttcact 321 ||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 20274 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 20317
>emb|BX831803.1|CNS09ZT9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1007 Score = 101 bits (51), Expect = 2e-18 Identities = 232/291 (79%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 828 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 769 Query: 284 acaacttt-tccagcaggggttacgagaccaagttcactaacattcacctcgataattgt 342 ||||| || |||||| || || || |||||||| ||||| ||||| |||||||| ||||| Sbjct: 768 acaaccttatccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgt 709 Query: 343 tcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacaga 402 |||||| || || ||||| || | || ||||| |||||||| || || ||||| | Sbjct: 708 tcccctggtaatcacaccgagttatgtatacatgggaccgttaggattcttcttaatccc 649 Query: 403 aattatgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaa 462 || || ||||| ||| || ||||| |||||||||||||| || || ||||||||||| Sbjct: 648 gatgatctcgagacagaaagtgcattttagttcagggtgagttacgtgggccttggtgaa 589 Query: 463 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 513 ||| |||| || || |||||||| | ||| |||||||| ||||||||||| Sbjct: 588 acgaagactagatggacggatgaaacgctcgtactttggaggcttccttgt 538
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 81.8 bits (41), Expect = 2e-12 Identities = 149/185 (80%) Strand = Plus / Minus Query: 329 acctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttggg 388 |||||||| ||||||||||| ||||| ||||| || || || ||||| |||||||| || Sbjct: 54699 acctcgatgattgttcccctggtcatcacaccgagtgatgtatacatgggaccgttagga 54640 Query: 389 tttttcttcacagaaattatgtcgaggttgaacgtacatttcagttcagggtgagtcaca 448 || ||||| | || || ||||| ||| || ||||| |||||||||||||| || Sbjct: 54639 ttcttcttaatcccgatgatctcgagacagaaagtgcattttagttcagggtgagtgacg 54580 Query: 449 tgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttc 508 || |||||||||||||| ||||||| || |||||||| | ||| |||||||| |||||| Sbjct: 54579 tgggccttggtgaaacgaagaccagatggacggatgaaacgctcgtactttggaggcttc 54520 Query: 509 cttgt 513 ||||| Sbjct: 54519 cttgt 54515
>ref|XM_950402.1| Theileria annulata strain Ankara tgf beta-inducible nuclear protein 1 (TA18362) partial mRNA Length = 780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 226 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 285 |||||||||||| |||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 765 agcattgatacacccatcattttcgggattatttgtaacttgagcatatttggcccaaat 706 Query: 286 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 345 |||||||| | | ||||| | ||| |||||||| |||||||| || || |||||||| Sbjct: 705 gacttttcctgtctgtgttaccaaacccagttcactcacattcacttcaattattgttcc 646
>ref|XM_778150.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF beta-inducible nuclear protein 1 (Hairy cell leukemia protein 1) (HUSSY-29) (LOC577954), mRNA Length = 859 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 223 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 282 |||||||||||| ||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 847 gacagcattgatgcagccatcattttcagggttatttgtgacttgcgcatatttacccca 788 Query: 283 aacaacttttcc 294 ||||||||||| Sbjct: 787 gacaacttttcc 776
>emb|BX832734.1|CNS09ZR3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 69.9 bits (35), Expect = 8e-09 Identities = 128/159 (80%) Strand = Plus / Minus Query: 226 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 285 |||||| ||||| || || ||||| || || ||||| || ||| | ||||| ||||| || Sbjct: 767 agcatttatacatccgtcgttctctggattgtttgtcacttgaacatattttccccagac 708 Query: 286 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 345 ||| |||||||| || || || ||||||| |||| ||||| |||||||| |||||||| Sbjct: 707 aacctttccagctggtgtcacacgaccaagcgcactcacattgacctcgatgattgttcc 648 Query: 346 cctcgtcataacaccaagagaagtgtacattggaccgtt 384 ||| ||||| ||||| || || || ||||| |||||||| Sbjct: 647 cctggtcatcacaccgagtgatgtatacatgggaccgtt 609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 425 catttcagttcagggtgagtcacatgagccttggtgaaacgcagaccag 473 ||||| |||||||||||||| || || |||||||||||||| ||||||| Sbjct: 568 cattttagttcagggtgagtgacgtgggccttggtgaaacgaagaccag 520
>gb|AY706155.1| Aplysia californica TGF beta-inducible nuclear protein mRNA, complete cds Length = 878 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 211 tcacacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 270 |||||| | ||| ||||| ||||| ||||||||||| ||||| || || || || ||||| Sbjct: 812 tcacactaacaacacagcgttgatgcagccatcattttccggattgttggtcacttgagc 753 Query: 271 gtatttgccccaaacaacttttccag 296 |||||| ||||| ||||||||||||| Sbjct: 752 gtatttaccccacacaacttttccag 727
>gb|DQ424947.1| Bombyx mori TGF beta-inducible nuclear protein 1 (TINP1) mRNA, complete cds Length = 1383 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| Sbjct: 1159 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1100 Query: 284 acaacttttccagc 297 |||||||| ||||| Sbjct: 1099 acaactttaccagc 1086
>gb|DQ311226.1| Bombyx mori hairy cell leukemia protein 1 mRNA, complete cds Length = 1380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| Sbjct: 1161 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1102 Query: 284 acaacttttccagc 297 |||||||| ||||| Sbjct: 1101 acaactttaccagc 1088
>emb|BX832733.1|CNS09ZQF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1028 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 425 catttcagttcagggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatg 484 ||||| |||||||||||||| || || |||||||||||||| ||||||| || |||||| Sbjct: 612 cattttagttcagggtgagtgacgtgggccttggtgaaacgaagaccagatggacggatg 553 Query: 485 aacctctcatactttggtggcttccttgt 513 | | ||| | |||||| ||||||||||| Sbjct: 552 acacgctcgtgctttggaggcttccttgt 524
>emb|AM260497.1| Platanus acerifolia partial mRNA for TGF-beta inducible protein (tgf gene) Length = 660 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 416 ttgaacgtacatttcagttcagggtgagtcacatgagccttggtgaaacgcagaccagta 475 ||||| || ||||||| ||||||||| ||||| || || ||||||||||||| || | Sbjct: 616 ttgaaagtgcatttcaattcagggtgtgtcacgtgggctttggtgaaacgcaagcctgat 557 Query: 476 ggtcggatgaacctctcatactttggtggcttccttgtaaatcc 519 || || ||||| | |||||||||||| ||||| ||||||||||| Sbjct: 556 ggacgaatgaaacgctcatactttggaggctttcttgtaaatcc 513
>ref|XM_381311.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01135.1) partial mRNA Length = 783 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 230 ttgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaacaact 289 ||||| ||||| || ||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 764 ttgatgcagccctcgttctctgggttattggtgacctgagcgtagcgaccccaaacaacc 705 Query: 290 tttccagcaggggttacgagaccaagttcactaacattcacctcgat 336 |||||| ||| ||| || ||||||||||| || || || |||||||| Sbjct: 704 tttccaccagcggtgaccagaccaagttcgctgacgttgacctcgat 658
>gb|BC073255.1| Xenopus laevis cDNA clone MGC:80606 IMAGE:5506003, complete cds Length = 1003 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || |||||||| || || || ||||| ||||||||| Sbjct: 927 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 868 Query: 287 acttt 291 ||||| Sbjct: 867 acttt 863
>gb|AY281348.1| Xenopus laevis HMG-box protein HMG2L1 (HMG2L1) mRNA, complete cds Length = 2626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || |||||||| || || || ||||| ||||||||| Sbjct: 548 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 489 Query: 287 acttt 291 ||||| Sbjct: 488 acttt 484
>gb|BC046083.1| Danio rerio zgc:56334, mRNA (cDNA clone MGC:56334 IMAGE:5603772), complete cds Length = 1194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 218 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 277 ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857 Query: 278 cccca 282 ||||| Sbjct: 856 cccca 852 Score = 40.1 bits (20), Expect = 7.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 428 ttcagttcagggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaac 487 ||||||||||||||||| || || |||||| | || |||| ||| |||||| |||||| Sbjct: 706 ttcagttcagggtgagtgacgtgtgccttgttaaaccgcaaacccataggtctgatgaag 647 Query: 488 ctctcata 495 | |||||| Sbjct: 646 cgctcata 639
>ref|NM_199568.1| Danio rerio zgc:56334 (zgc:56334), mRNA Length = 1194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 218 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 277 ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857 Query: 278 cccca 282 ||||| Sbjct: 856 cccca 852 Score = 40.1 bits (20), Expect = 7.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 428 ttcagttcagggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaac 487 ||||||||||||||||| || || |||||| | || |||| ||| |||||| |||||| Sbjct: 706 ttcagttcagggtgagtgacgtgtgccttgttaaaccgcaaacccataggtctgatgaag 647 Query: 488 ctctcata 495 | |||||| Sbjct: 646 cgctcata 639
>ref|XM_779898.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF beta-inducible nuclear protein 1 (CDK105 protein) (LOC579803), mRNA Length = 318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 223 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 282 |||||| ||||| |||||||| || || ||||||||||| || || || ||||| ||||| Sbjct: 306 gacagcgttgatgcagccatcgttttcagggttatttgtgacttgcgcatatttacccca 247 Query: 283 aacaacttttcc 294 ||||||||||| Sbjct: 246 gacaacttttcc 235
>emb|X69119.1|DMUQ80FP D.melanogaster gene for ubiquitin-80 fusion protein Length = 5329 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 4047 acctgagcgtatttgccccagacaacttttcc 4016
>gb|AY118472.1| Drosophila melanogaster GM13959 full insert cDNA Length = 907 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 763 acctgagcgtatttgccccagacaacttttcc 732
>ref|NM_058031.4| Drosophila melanogaster Intronic Protein 259 CG5277-RA (Ip259), mRNA Length = 900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 790 acctgagcgtatttgccccagacaacttttcc 759
>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones DS00953 and BACR48K04, complete sequence Length = 161754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 69341 acctgagcgtatttgccccagacaacttttcc 69310
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 171609 acctgagcgtatttgccccagacaacttttcc 171578
>gb|U56257.1|DMU56257 Drosophila melanogaster intronic protein 259 (IP259) gene, complete cds Length = 1367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 263 acctgagcgtatttgccccaaacaacttttcc 294 |||||||||||||||||||| ||||||||||| Sbjct: 1130 acctgagcgtatttgccccagacaacttttcc 1099
>ref|XM_623623.1| PREDICTED: Apis mellifera similar to CG5277-PA (LOC551230), mRNA Length = 780 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 226 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 285 |||||| || || |||||||| || || ||||||||||| ||||| ||||| |||||||| Sbjct: 765 agcatttatgcaaccatcattttcaggattatttgtaacttgagcatattttccccaaac 706 Query: 286 aacttt 291 ||||| Sbjct: 705 cacttt 700
>gb|AY438655.1| Quercus robur TGF-beta inducible protein gene, partial cds and 3' UTR Length = 634 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtattt 276 ||||| || ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 430 acagcgtttatacaaccatcattctcagggttatttgtcacttgagcatattt 378 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 407 atgtcgaggttgaacgtacatttcagttcagggtgagtcacatgagc 453 ||||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct: 51 atgtcaagattgaaagtgcatttgagttcagggtgtgtcacatgagc 5
>ref|XM_711546.1| Candida albicans SC5314 putative ribosome maturation factor (CaO19_7398), mRNA Length = 390 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 266 tgagcgtatttgccccaaacaacttt 291 ||||||||||| |||||||||||||| Sbjct: 335 tgagcgtatttaccccaaacaacttt 310
>ref|XM_710995.1| Candida albicans SC5314 putative ribosome maturation factor (CaO19_7424), mRNA Length = 786 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 266 tgagcgtatttgccccaaacaacttt 291 ||||||||||| |||||||||||||| Sbjct: 731 tgagcgtatttaccccaaacaacttt 706
>ref|XM_813522.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8 (Tc00.1047053508231.200) partial mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| |||| Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722 Query: 273 atttgcccca 282 | || ||||| Sbjct: 721 actttcccca 712
>ref|XM_801572.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8 (Tc00.1047053506249.60) partial mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Minus Query: 213 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 272 |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| |||| Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722 Query: 273 atttgcccca 282 | || ||||| Sbjct: 721 actttcccca 712
>dbj|AK115831.1| Ciona intestinalis cDNA, clone:cilv028h09, full insert sequence Length = 1063 Score = 44.1 bits (22), Expect = 0.45 Identities = 61/74 (82%) Strand = Plus / Minus Query: 218 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 277 ||||| |||||||| |||||||||||||| || || || || || || || || ||||| Sbjct: 708 agcaacacagcattaatacagccatcattttcaggattgttcgtgacttgtgcatatttt 649 Query: 278 ccccaaacaacttt 291 ||||||| |||||| Sbjct: 648 ccccaaataacttt 635
>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene, complete cds Length = 1974 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 gtttgggtttttcttcacagaa 403 |||||||||||||||||||||| Sbjct: 1576 gtttgggtttttcttcacagaa 1597
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 gtttgggtttttcttcacagaa 403 |||||||||||||||||||||| Sbjct: 79904 gtttgggtttttcttcacagaa 79925
>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds Length = 1822 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 382 gtttgggtttttcttcacagaa 403 |||||||||||||||||||||| Sbjct: 1250 gtttgggtttttcttcacagaa 1271
>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 Length = 25057 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 266 tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 325 ||||| ||||| |||||||||||||| ||| ||| || || ||||| | |||||| ||| Sbjct: 20068 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 20009 Query: 326 ttcacctcgataa 338 || ||||| |||| Sbjct: 20008 ttaacctcaataa 19996
>emb|AJ719405.1| Gallus gallus mRNA for hypothetical protein, clone 2a2 Length = 1020 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736 Query: 287 acttt 291 ||||| Sbjct: 735 acttt 731
>ref|NM_001006579.1| Gallus gallus similar to TGF beta-inducible nuclear protein 1 (L-name related LNR42) (LOC427206), mRNA Length = 1020 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736 Query: 287 acttt 291 ||||| Sbjct: 735 acttt 731
>emb|CR523694.1| Gallus gallus finished cDNA, clone ChEST23p6 Length = 840 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 708 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 649 Query: 287 acttt 291 ||||| Sbjct: 648 acttt 644
>emb|CR388679.1| Gallus gallus finished cDNA, clone ChEST387a6 Length = 785 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 227 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 286 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 576 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 517 Query: 287 acttt 291 ||||| Sbjct: 516 acttt 512
>ref|NM_001023548.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCP1E11.08), partial mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 266 tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 325 ||||| ||||| |||||||||||||| ||| ||| || || ||||| | |||||| ||| Sbjct: 728 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 669 Query: 326 ttcacctcgataa 338 || ||||| |||| Sbjct: 668 ttaacctcaataa 656
>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence Length = 191904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 tttttcttcacagaaattatg 409 ||||||||||||||||||||| Sbjct: 127068 tttttcttcacagaaattatg 127048
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tatttgccccaaacaacttttccag 296 ||||| ||||||||||||||||||| Sbjct: 2872770 tatttaccccaaacaacttttccag 2872746
>gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosome 6, complete sequence Length = 179265 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gtcataacaccaagagaagt 369 |||||||||||||||||||| Sbjct: 134625 gtcataacaccaagagaagt 134606
>ref|NM_001031517.1| Gallus gallus ankyrin repeat and SOCS box-containing 3 (ASB3), mRNA Length = 2770 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cagtgcactcatcccttcaa 191 |||||||||||||||||||| Sbjct: 460 cagtgcactcatcccttcaa 441
>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence Length = 161846 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gtctattccaaagacaagca 125 |||||||||||||||||||| Sbjct: 99757 gtctattccaaagacaagca 99738
>ref|XM_360523.1| Magnaporthe grisea 70-15 hypothetical protein (MG10835.4) partial mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.1 Identities = 56/68 (82%) Strand = Plus / Minus Query: 434 tcagggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaacctctca 493 |||||||| || ||||||||||| || |||||||||| |||| | |||||| | ||| Sbjct: 563 tcagggtgtgtaacatgagcctttttgtaacgcagacccataggcctgatgaagcgctcg 504 Query: 494 tactttgg 501 |||||||| Sbjct: 503 tactttgg 496
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cccaaacaacttttccagca 298 |||||||||||||||||||| Sbjct: 77654 cccaaacaacttttccagca 77673
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gtcataacaccaagagaagt 369 |||||||||||||||||||| Sbjct: 52579 gtcataacaccaagagaagt 52560
>ref|XM_646180.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (173.t00011) partial mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 224 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 283 |||||||| || || |||||||| || || |||||||| || || || ||||||||||| Sbjct: 770 acagcattaatgcacccatcattttctggattatttgttacttgtgcatatttgccccat 711 Query: 284 acaa 287 |||| Sbjct: 710 acaa 707
>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a novel gene, complete sequence Length = 183342 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 acaaaattgcccttgttaga 160 |||||||||||||||||||| Sbjct: 111619 acaaaattgcccttgttaga 111638
>emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247I13 on chromosome 22 Contains the 5' end of the DRG1 gene for developmentally regulated GTP binding protein 1, the EIF4ENIF1 gene foreukaryotic translation initiation factor 4E nuclear import factor 1, the 5' end of the gene for homolog of yeast Sfi1 (SFI1), a H2A histone family member Z (H2AFZ) pseudogene, a ribosomal protein S26 (RPS260) pseudogene, two novel genes and two CpG islands, complete sequence Length = 168110 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 acaacttttccagcaggggt 303 |||||||||||||||||||| Sbjct: 155785 acaacttttccagcaggggt 155804
>emb|AJ720837.1| Gallus gallus mRNA for hypothetical protein, clone 27g5 Length = 2794 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cagtgcactcatcccttcaa 191 |||||||||||||||||||| Sbjct: 484 cagtgcactcatcccttcaa 465
>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown, complete sequence Length = 180132 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 acaacttttccagcaggggt 303 |||||||||||||||||||| Sbjct: 74788 acaacttttccagcaggggt 74807
>gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complete sequence Length = 186219 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 acaaaattgcccttgttaga 160 |||||||||||||||||||| Sbjct: 130509 acaaaattgcccttgttaga 130490
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 gtttgggtttttcttcacagaaat 405 ||||||||||||||||| |||||| Sbjct: 82301 gtttgggtttttcttcaaagaaat 82324
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cccaaacaacttttccagca 298 |||||||||||||||||||| Sbjct: 28442730 cccaaacaacttttccagca 28442749
>emb|AL136419.3|CNS01DW7 Human chromosome 14 DNA sequence BAC R-76P17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169476 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aaacaacttttccagcaggg 301 |||||||||||||||||||| Sbjct: 148732 aaacaacttttccagcaggg 148751 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,755,278 Number of Sequences: 3902068 Number of extensions: 3755278 Number of successful extensions: 64585 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64421 Number of HSP's gapped (non-prelim): 153 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)