Clone Name	rbags36d02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_473128.1| Oryza sativa (japonica cultivar-group), predic...	46	0.072
2	dbj|AK069997.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.072
3	gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho...	44	0.29
4	emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chr...	44	0.29
5	gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, comp...	42	1.1
6	gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, comple...	42	1.1
7	emb|AL359844.15| Human DNA sequence from clone RP11-314J18 on ch...	42	1.1
8	gb|AC144826.2| Danio rerio clone CH211-20C7, complete sequence	42	1.1
9	emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in...	42	1.1
10	dbj|AK123979.1| Homo sapiens cDNA FLJ41985 fis, clone SPLEN2014946	42	1.1
11	gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, comp...	42	1.1
12	gb|BC034557.1| Homo sapiens, clone IMAGE:4475530, mRNA	42	1.1
13	emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 i...	42	1.1
14	emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in ...	42	1.1
15	emb|CR925760.12| Zebrafish DNA sequence from clone DKEYP-89A8 in...	42	1.1
16	emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in l...	42	1.1
17	gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com...	40	4.5
18	gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome...	40	4.5
19	gb|DP000017.1| Sus scrofa target 1 genomic scaffold	40	4.5
20	gb|AC087423.2| Sus scrofa clone RP44-55G2, complete sequence	40	4.5
21	gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, com...	40	4.5
22	gb|AC102368.6| Mus musculus chromosome 14, clone RP23-220D8, com...	40	4.5
23	gb|AC092448.6| Homo sapiens BAC clone RP11-776E7 from 7, complet...	40	4.5
24	gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complet...	40	4.5
25	emb|AL157373.23| Human DNA sequence from clone RP11-456H18 on ch...	40	4.5
26	emb|AL022398.1|HS434O14 Human DNA sequence from clone RP3-434O14...	40	4.5
27	emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in ...	40	4.5
28	gb|AC112770.4| Homo sapiens 3 BAC RP11-686L6 (Roswell Park Cance...	40	4.5
29	gb|AC121762.7| Homo sapiens 12 BAC RP11-195D6 (Roswell Park Canc...	40	4.5
30	gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Canc...	40	4.5
31	gb|AC093547.3| Drosophila melanogaster 3L BAC RP98-2K11 (Roswell...	40	4.5
32	dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome	40	4.5
33	gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, comp...	40	4.5
34	gb|AC073614.17| Homo sapiens Xp BAC RP11-617O8 (Roswell Park Can...	40	4.5
35	gb|AC025919.8| Homo sapiens chromosome 15 clone RP11-947O24 map ...	40	4.5
36	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	4.5
37	emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...	40	4.5
38	gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79...	40	4.5
39	gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome...	40	4.5

---

>ref|XM_473128.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 684

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 271 gaattngctaactccacgattagtnnaagtgctgtttcaaagga 314
           ||||| ||||| ||||| |||| |  ||||||||||||||||||
Sbjct: 638 gaatttgctaattccacaattaattcaagtgctgtttcaaagga 595

---

>dbj|AK069997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G06, full
           insert sequence
          Length = 1141

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 271 gaattngctaactccacgattagtnnaagtgctgtttcaaagga 314
           ||||| ||||| ||||| |||| |  ||||||||||||||||||
Sbjct: 756 gaatttgctaattccacaattaattcaagtgctgtttcaaagga 713

---

>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216677

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 66     aaataaatggacaaaaatatacattc 91
              ||||||||||| ||||||||||||||
Sbjct: 209376 aaataaatggagaaaaatatacattc 209351

---

>emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chromosome 9, complete
             sequence
          Length = 123274

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 114   ttgtattatgatattttgtctacaac 139
             ||||||||||||||||||| ||||||
Sbjct: 17590 ttgtattatgatattttgtttacaac 17565

---

>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence
          Length = 202156

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 55     caaagtacaacaaataaatggacaaaaat 83
              |||||||||||||| ||||||| ||||||
Sbjct: 131259 caaagtacaacaaacaaatggagaaaaat 131287

---

>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   tcaaactcaggtagcagatca 224
             |||||||||||||||||||||
Sbjct: 44785 tcaaactcaggtagcagatca 44765

---

>emb|AL359844.15| Human DNA sequence from clone RP11-314J18 on chromosome 10 Contains the
             gene for a novel protein (FLJ25162), the GU2 gene for
             nucleolar protein GU2 (GUB, MGC3199, RH-II/GuB), the DDX21
             gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21
             (GUA, GURDB, RH-II/GU, RH-II/GuA), the gene for a novel
             protein (DKFZP586B0923)(KIAA1279), an endothelial-derived
             gene 1 (EG1)(EG-1, DKFZP434N185) pseudogene, an actin,
             beta (ACTB) pseudogene and three CpG islands, complete
             sequence
          Length = 171364

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 66    aaataaatggacaaaaatatacatt 90
             ||||||||| |||||||||||||||
Sbjct: 87504 aaataaatgtacaaaaatatacatt 87480

---

>gb|AC144826.2| Danio rerio clone CH211-20C7, complete sequence
          Length = 163056

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 61    acaacaaataaatggacaaaaatat 85
             |||| ||||||||||||||||||||
Sbjct: 29944 acaataaataaatggacaaaaatat 29968

---

>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22,
              complete sequence
          Length = 143845

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     aaatggacaaaaatatacatt 90
              |||||||||||||||||||||
Sbjct: 133730 aaatggacaaaaatatacatt 133710

---

>dbj|AK123979.1| Homo sapiens cDNA FLJ41985 fis, clone SPLEN2014946
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  tcaaactcaggtagcagatca 224
            |||||||||||||||||||||
Sbjct: 1820 tcaaactcaggtagcagatca 1800

---

>gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, complete sequence
          Length = 171696

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    acaaataaatggacaaaaata 84
             |||||||||||||||||||||
Sbjct: 15132 acaaataaatggacaaaaata 15112

---

>gb|BC034557.1| Homo sapiens, clone IMAGE:4475530, mRNA
          Length = 4319

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  tcaaactcaggtagcagatca 224
            |||||||||||||||||||||
Sbjct: 3581 tcaaactcaggtagcagatca 3561

---

>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
              complete sequence
          Length = 171213

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     aaatggacaaaaatatacatt 90
              |||||||||||||||||||||
Sbjct: 134235 aaatggacaaaaatatacatt 134215

---

>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22,
             complete sequence
          Length = 219929

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    aaatggacaaaaatatacatt 90
             |||||||||||||||||||||
Sbjct: 36112 aaatggacaaaaatatacatt 36092

---

>emb|CR925760.12| Zebrafish DNA sequence from clone DKEYP-89A8 in linkage group 10,
              complete sequence
          Length = 122664

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 61     acaacaaataaatggacaaaaatat 85
              |||| ||||||||||||||||||||
Sbjct: 119625 acaataaataaatggacaaaaatat 119601

---

>emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in linkage group 14, complete
              sequence
          Length = 197465

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     aaataaatggacaaaaatata 86
              |||||||||||||||||||||
Sbjct: 180450 aaataaatggacaaaaatata 180470

---

>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     aaataaatggacaaaaatat 85
              ||||||||||||||||||||
Sbjct: 101590 aaataaatggacaaaaatat 101571

---

>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06,
             complete sequence
          Length = 71193

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   caaactcaggtagcagatca 224
             ||||||||||||||||||||
Sbjct: 19954 caaactcaggtagcagatca 19973

---

>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     acaaaaatatacattcccac 95
              ||||||||||||||||||||
Sbjct: 398690 acaaaaatatacattcccac 398671

---

>gb|AC087423.2| Sus scrofa clone RP44-55G2, complete sequence
          Length = 150305

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    acaaaaatatacattcccac 95
             ||||||||||||||||||||
Sbjct: 20690 acaaaaatatacattcccac 20671

---

>gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, complete sequence
          Length = 180319

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     aaataaatggacaaaaatat 85
              ||||||||||||||||||||
Sbjct: 168499 aaataaatggacaaaaatat 168480

---

>gb|AC102368.6| Mus musculus chromosome 14, clone RP23-220D8, complete sequence
          Length = 208781

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    ataaatggacaaaaatatacattc 91
             ||||||||| ||||||||||||||
Sbjct: 45995 ataaatggagaaaaatatacattc 45972

---

>gb|AC092448.6| Homo sapiens BAC clone RP11-776E7 from 7, complete sequence
          Length = 169788

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    acaaaaatatacattcccac 95
             ||||||||||||||||||||
Sbjct: 40468 acaaaaatatacattcccac 40487

---

>gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complete sequence
          Length = 186044

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     acaaaaatatacattcccac 95
              ||||||||||||||||||||
Sbjct: 142553 acaaaaatatacattcccac 142572

---

>emb|AL157373.23| Human DNA sequence from clone RP11-456H18 on chromosome 6 Contains two
             novel genes, the 5' end of the HIVEP1 gene for human
             immunodeficiency virus type I enhancer binding protein 1
             and three CpG islands, complete sequence
          Length = 93847

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    gtacaacaaataaatggacaaaaa 82
             |||||||||||||||| |||||||
Sbjct: 90419 gtacaacaaataaatgaacaaaaa 90396

---

>emb|AL022398.1|HS434O14 Human DNA sequence from clone RP3-434O14 on chromosome 1q32.3-41
             Contains the 3' end of the HSD11B1 gene for hydroxysteroid
             (11-beta) dehydrogenase 1, a adenosine A2b receptor
             (ADORA2B) pseudogene, the T3JAM gene for TRAF3-interacting
             Jun N-terminal kinase (JNK)-activating modulator, a novel
             gene (FLJ25078), the IRF6 gene for interferon regulatory
             factor 6, a novel gene, a novel gene (MGC29875) and the 5'
             end of a novel gene, complete sequence
          Length = 135928

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   caagggtacagaacctcaaa 208
             ||||||||||||||||||||
Sbjct: 30718 caagggtacagaacctcaaa 30737

---

>emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in linkage group 18,
             complete sequence
          Length = 200732

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    gtcaaagtacaacaaataaa 72
             ||||||||||||||||||||
Sbjct: 52217 gtcaaagtacaacaaataaa 52198

---

>gb|AC112770.4| Homo sapiens 3 BAC RP11-686L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 187977

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    aacaaataaatggacaaaaatata 86
             ||||||||||||||| ||||||||
Sbjct: 29289 aacaaataaatggactaaaatata 29266

---

>gb|AC121762.7| Homo sapiens 12 BAC RP11-195D6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82558

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    caacaaataaatggacaaaa 81
             ||||||||||||||||||||
Sbjct: 23973 caacaaataaatggacaaaa 23954

---

>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139793

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    caacaaataaatggacaaaa 81
             ||||||||||||||||||||
Sbjct: 54336 caacaaataaatggacaaaa 54355

---

>gb|AC093547.3| Drosophila melanogaster 3L BAC RP98-2K11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 142334

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aataaatggacaaaaatata 86
             ||||||||||||||||||||
Sbjct: 78010 aataaatggacaaaaatata 77991

---

>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    attgtattatgatattttgt 132
              ||||||||||||||||||||
Sbjct: 133674 attgtattatgatattttgt 133655

---

>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence
          Length = 195849

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   attgtattatgatattttgt 132
             ||||||||||||||||||||
Sbjct: 63340 attgtattatgatattttgt 63321

---

>gb|AC073614.17| Homo sapiens Xp BAC RP11-617O8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 129801

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    taaatggacaaaaatataca 88
             ||||||||||||||||||||
Sbjct: 31003 taaatggacaaaaatataca 30984

---

>gb|AC025919.8| Homo sapiens chromosome 15 clone RP11-947O24 map 15q21.1, complete
             sequence
          Length = 188439

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tgattgcataattgctggta 165
             ||||||||||||||||||||
Sbjct: 47112 tgattgcataattgctggta 47093

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 205      caaactcaggtagcagatca 224
                ||||||||||||||||||||
Sbjct: 10803022 caaactcaggtagcagatca 10803041

---

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 21      tgctgtctttgttgcccatggttg 44
               |||||||||||||| |||||||||
Sbjct: 3300967 tgctgtctttgttggccatggttg 3300990

---

>gb|AE003598.2| Drosophila melanogaster chromosome 3L, section 79 of 83 of the complete
             sequence
          Length = 303370

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aataaatggacaaaaatata 86
             ||||||||||||||||||||
Sbjct: 18378 aataaatggacaaaaatata 18359

---

>gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome 9, complete sequence
          Length = 190832

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    caaataaatggacaaaaata 84
             ||||||||||||||||||||
Sbjct: 14418 caaataaatggacaaaaata 14437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,016,264
Number of Sequences: 3902068
Number of extensions: 3016264
Number of successful extensions: 59720
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59639
Number of HSP's gapped (non-prelim): 81
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---