ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36c19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IAA5_SORBI (P81368) Alpha-amylase inhibitor 5 (SI alpha-5) 31 0.72

>IAA5_SORBI (P81368) Alpha-amylase inhibitor 5 (SI alpha-5)|
          Length = 116

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 7   PVLLSRCTISYE*LILYCHPTFFNDLKESLVTSYNNRGTC 126
           PVL  RC    E L+ YC         +S++T Y  R TC
Sbjct: 38  PVLKERCCSELEKLVPYCRCGALRTALDSMMTGYEMRPTC 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,777,603
Number of Sequences: 219361
Number of extensions: 660815
Number of successful extensions: 1508
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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