ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35n12 |
|---|---|
| Clone Library Name | barley_pub |
>SET_RAT (Q63945) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002) Length = 289 Score = 91.7 bits (226), Expect = 2e-18 Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D++ YL SGY I F ENPYFE++ L+K + + G + +T IK Sbjct: 112 DEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIK 171 Query: 518 WKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWP 351 WK G ++ + + K S++ E ESFFTWFTD +D DE+ E+IK+D+WP Sbjct: 172 WKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDH-----SDAGADELGEVIKDDIWP 226 Query: 350 NPLKYF 333 NPL+Y+ Sbjct: 227 NPLQYY 232
>SET_MOUSE (Q9EQU5) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) Length = 289 Score = 91.7 bits (226), Expect = 2e-18 Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D++ YL SGY I F ENPYFE++ L+K + + G + +T IK Sbjct: 112 DEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIK 171 Query: 518 WKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWP 351 WK G ++ + + K S++ E ESFFTWFTD +D DE+ E+IK+D+WP Sbjct: 172 WKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDH-----SDAGADELGEVIKDDIWP 226 Query: 350 NPLKYF 333 NPL+Y+ Sbjct: 227 NPLQYY 232
>SET_HUMAN (Q01105) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) Length = 290 Score = 91.7 bits (226), Expect = 2e-18 Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D++ YL SGY I F ENPYFE++ L+K + + G + +T IK Sbjct: 113 DEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIK 172 Query: 518 WKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWP 351 WK G ++ + + K S++ E ESFFTWFTD +D DE+ E+IK+D+WP Sbjct: 173 WKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDH-----SDAGADELGEVIKDDIWP 227 Query: 350 NPLKYF 333 NPL+Y+ Sbjct: 228 NPLQYY 233
>SET_DROME (P53997) Protein SET| Length = 269 Score = 81.3 bits (199), Expect = 3e-15 Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 9/110 (8%) Frame = -2 Query: 635 GYSITLNFSENPYFEDRKLTKSYTFADDGTT------TINATSIKWKEGMEINGNAIKKK 474 GY I +F ENPYFE++ LTK + + +T IKWKEG + + K Sbjct: 122 GYRINFHFDENPYFENKVLTKEFHLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKP 181 Query: 473 -GSKRPLVEE--SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 333 G+K+ E +FF WF+D D V DE+AE+IK+DLWPNPL+Y+ Sbjct: 182 YGNKKKRNSEYKTFFDWFSDN-----TDPVNDEIAELIKDDLWPNPLQYY 226
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 69.7 bits (169), Expect = 8e-12 Identities = 41/122 (33%), Positives = 59/122 (48%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D +M +Y+ +G F NPYF ++ + K Y G +T I Sbjct: 298 DAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPII 357 Query: 518 WKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLK 339 W+ G E + + + SFFTWF+D SL + D++AEIIKEDLWPNPL+ Sbjct: 358 WRRGHEPQSFIRRNQD-----LICSFFTWFSD---HSLPES--DKIAEIIKEDLWPNPLQ 407 Query: 338 YF 333 Y+ Sbjct: 408 YY 409
>TSYL1_MOUSE (O88852) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 379 Score = 69.3 bits (168), Expect = 1e-11 Identities = 41/122 (33%), Positives = 58/122 (47%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D +M +Y+ +G F NPYF ++ + K Y G +T I Sbjct: 239 DAEMLRYVTSLEVKELRHPKTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPII 298 Query: 518 WKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLK 339 W+ G E + + + SFFTWF+D SL + D +AEIIKEDLWPNPL+ Sbjct: 299 WRRGHEPQSFIRRNQD-----LICSFFTWFSD---HSLPES--DRIAEIIKEDLWPNPLQ 348 Query: 338 YF 333 Y+ Sbjct: 349 YY 350
>TSYL3_HUMAN (Q9H489) Testis-specific Y-encoded-like protein 3 (TSPY-like 3)| Length = 355 Score = 68.6 bits (166), Expect = 2e-11 Identities = 41/122 (33%), Positives = 58/122 (47%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D+ M YL +G F NPYF+++ + K Y G AT I+ Sbjct: 214 DEDMLCYLMNLEVRELRHSRTGCKFKFRFWSNPYFQNKVIVKEYECRASGRVVSIATRIR 273 Query: 518 WKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLK 339 W G E + + + R SFF+WF+ SL + D VA+IIK+DLWPNPL+ Sbjct: 274 WHWGQEPPALVHRNRDTVR-----SFFSWFSQ---HSLPEA--DRVAQIIKDDLWPNPLQ 323 Query: 338 YF 333 Y+ Sbjct: 324 YY 325
>TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 414 Score = 65.9 bits (159), Expect = 1e-10 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D+ M +Y+ +G F NPYF + L K Y G +T I+ Sbjct: 272 DEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYERRSSGRVVSLSTPIR 331 Query: 518 WKEGMEINGNAIK-KKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPL 342 W G + + + ++G+ P SFF WF+D H L D +AEIIK +LWPNPL Sbjct: 332 WHRGQDPQAHIHRNREGNTIP----SFFNWFSD--HSLLEF---DRIAEIIKGELWPNPL 382 Query: 341 KYF 333 +Y+ Sbjct: 383 QYY 385
>TSYL4_MOUSE (Q8VD63) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 406 Score = 64.3 bits (155), Expect = 3e-10 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D+ M +Y+ G F NPYF + L K Y G +T I+ Sbjct: 264 DEDMMRYMINLEVEELKQPRVGCKFKFIFQSNPYFRNEGLVKEYERRSSGRVVSLSTPIR 323 Query: 518 WKEGMEINGNAIK-KKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPL 342 W G E + + ++G+ P SFF WF+D H L D +AEIIK +LW NPL Sbjct: 324 WHRGQEPQAHIHRNREGNTIP----SFFNWFSD--HSLLE---FDRIAEIIKGELWSNPL 374 Query: 341 KYF 333 +Y+ Sbjct: 375 QYY 377
>SPR2_CAEEL (Q18240) Suppressor of presenilin 2| Length = 312 Score = 57.4 bits (137), Expect = 4e-08 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Frame = -2 Query: 635 GYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPL 456 G+ I + F N YF + +TKSY + +T T I+WKE K P Sbjct: 120 GFKIIMTFDPNEYFTNEVITKSYHLQSESPST-EITEIEWKEN------------KKPPF 166 Query: 455 VEE-----SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 333 E+ +F W T + +L D DE+AE+IK+DL+ NPL+Y+ Sbjct: 167 PEDGDSAHTFLEWLT---YAALPDS--DEIAEVIKDDLYVNPLQYY 207
>TSPY1_HUMAN (Q01534) Testis-specific Y-encoded protein 1| Length = 308 Score = 55.1 bits (131), Expect = 2e-07 Identities = 34/122 (27%), Positives = 56/122 (45%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIK 519 D+ M Y+ I L F NPYF+++ +TK Y ++T I+ Sbjct: 177 DEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIE 236 Query: 518 WKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLK 339 W E+ A +++ L +FF WF+D +++AEI+ +DLW NPL+ Sbjct: 237 WYPDYEV--EAYRRRHHNSSL---NFFNWFSDHNFAG-----SNKIAEILCKDLWRNPLQ 286 Query: 338 YF 333 Y+ Sbjct: 287 YY 288
>ASP_PLAFS (P13825) Aspartic acid-rich protein precursor| Length = 253 Score = 52.8 bits (125), Expect = 1e-06 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 3/103 (2%) Frame = -2 Query: 632 YSITLNFSENP--YFEDRKLTKSYTFADDGTTTINATSIKWKEGME-INGNAIKKKGSKR 462 Y IT F E + E L K TF ++ + T IKWKEG I + Sbjct: 103 YKITFIFGEKAKEFMEPLTLVKHVTFDNNQEKVVECTRIKWKEGKNPIAAVTHNRSDLDN 162 Query: 461 PLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 333 + + S F WFT E + D V E+I+ ++W NPL Y+ Sbjct: 163 EIPKWSIFEWFTTDELQDKPD-----VGELIRREIWHNPLSYY 200
>TSPY1_RAT (Q9R1M3) Testis-specific Y-encoded protein 1 (rTSPY)| Length = 334 Score = 52.0 bits (123), Expect = 2e-06 Identities = 34/94 (36%), Positives = 50/94 (53%) Frame = -2 Query: 614 FSENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFT 435 FSENPYF + +TK Y + G ++++I+W G +G A + + R +FF Sbjct: 245 FSENPYFRNDIVTKDYQLSIIGYKESDSSTIEWI-GQAEHGYANCMQDTTRL----TFFN 299 Query: 434 WFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 333 W HK + +AEII +DLWPNPL Y+ Sbjct: 300 WLC--AHKFPGS---NRIAEIIMDDLWPNPLYYY 328
>TSPY1_BOVIN (O19110) Testis-specific Y-encoded protein 1 (bTSPY)| Length = 317 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/98 (27%), Positives = 43/98 (43%) Frame = -2 Query: 626 ITLNFSENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEE 447 + +F +NPYF + + K Y G +T + W E A ++ R L Sbjct: 219 LIFSFRDNPYFLNSVIIKEYYLDITGYRARRSTPVHWFWDFE--RGAPSRRRDTRSL--- 273 Query: 446 SFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYF 333 +F W + + +AEII ED+W +PLKY+ Sbjct: 274 NFLNWLSGHNGPE-----SNRIAEIISEDVWDDPLKYY 306
>YCO6_SCHPO (O59797) Putative nucleosome assembly protein C364.06| Length = 393 Score = 40.0 bits (92), Expect = 0.007 Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 29/130 (22%) Frame = -2 Query: 635 GYSITLNFSENPYFEDRKLTKSYTFADD-GTTTI------NATSIKWKEGMEINGNAIKK 477 G+ + F+ENP+F ++ LTK+Y + ++ G + + + WKE ++ + K Sbjct: 205 GFKLEFEFAENPFFTNKILTKTYYYMEESGPSNVFLYDHAEGDKVDWKENADLTVRTVTK 264 Query: 476 KGS----------KRPLVEESFFTWFTDTEHKSLADGVQD------------EVAEIIKE 363 K K + +SFF +F S D + ++ E KE Sbjct: 265 KQRNKNTKQTRVVKVSVPRDSFFNFFNPPTPPSEEDEESESPELDELLELDYQIGEDFKE 324 Query: 362 DLWPNPLKYF 333 L P +++F Sbjct: 325 KLIPRAVEWF 334
>NP1L1_HUMAN (P55209) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (hNRP) Length = 391 Score = 39.7 bits (91), Expect = 0.009 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 31/131 (23%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSY----------TFADDGTTTINAT--SIKWKEGMEINGN 489 + + +F N YF + LTK+Y F+ DG + T I WK+G + Sbjct: 212 FVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLK 271 Query: 488 AIKKK------GSKRPLVE----ESFFTWFTDTEHKSLADGVQD---------EVAEIIK 366 IKKK G+ R + + +SFF +F E D D E+ ++ Sbjct: 272 TIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLR 331 Query: 365 EDLWPNPLKYF 333 E + P + YF Sbjct: 332 ERIIPRSVLYF 342
>NP1L1_MOUSE (P28656) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (Brain protein DN38) Length = 391 Score = 39.3 bits (90), Expect = 0.012 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 31/131 (23%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSY----------TFADDGTTTINAT--SIKWKEGMEINGN 489 + + +F N YF + LTK+Y F+ DG + T I WK+G + Sbjct: 212 FVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLK 271 Query: 488 AIKKK------GSKRPLVE----ESFFTWFTDTEHKSLADGVQD---------EVAEIIK 366 IKKK G+ R + + +SFF +F E D D E+ ++ Sbjct: 272 TIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPENGDLDDDAEAILAADFEIGHFLR 331 Query: 365 EDLWPNPLKYF 333 E + P + YF Sbjct: 332 ERIIPRSVLYF 342
>NP1L1_RAT (Q9Z2G8) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) Length = 390 Score = 38.1 bits (87), Expect = 0.026 Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 31/131 (23%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSY----------TFADDGTTTINAT--SIKWKEGMEINGN 489 + + +F N YF + LTK+Y F+ DG + T I WK+G + Sbjct: 211 FILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLK 270 Query: 488 AIKKK------GSKRPLV----EESFFTWFTDTEHKSLADGVQD---------EVAEIIK 366 IKKK G+ R + + SFF +F E D D E+ ++ Sbjct: 271 TIKKKQKHKGRGTVRTVTKTVSKTSFFNFFAPPEVPENGDLDDDXEAILAADFEIGHFLR 330 Query: 365 EDLWPNPLKYF 333 E + P + YF Sbjct: 331 ERIIPRSVLYF 341
>NP1L2_MOUSE (P51860) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 36.2 bits (82), Expect = 0.098 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 22/105 (20%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSYTFADD----------GTTTINAT--SIKWKEGMEINGN 489 +++ +F N YF++ LTK+Y GT AT I W EG + Sbjct: 285 FTLEFHFKPNEYFKNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNVTLR 344 Query: 488 AIKKK------GSKRPLVE----ESFFTWFTDTEHKSLADGVQDE 384 IKKK G+ R + E +SFF +F+ SL GV+++ Sbjct: 345 TIKKKQRHRVWGTVRTVTEDFPKDSFFNFFS-PHGISLNGGVEND 388
>NP1L4_HUMAN (Q99733) Nucleosome assembly protein 1-like 4 (Nucleosome assembly| protein 2) (NAP2) Length = 375 Score = 36.2 bits (82), Expect = 0.098 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 32/132 (24%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSYT----------FADDGTTTINAT--SIKWKEGMEINGN 489 + + +F N YF + LTK+Y F+ +G ++ +I WK+G + Sbjct: 204 FVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVK 263 Query: 488 AIKKK------GSKRPLVE----ESFFTWFTDTEHKSLADGVQD----------EVAEII 369 IKKK G+ R + + ESFF +F + + + + E+ Sbjct: 264 TIKKKQKHKGRGTVRTITKQVPNESFFNFFNPLKASGDGESLDEDSEFTLASDFEIGHFF 323 Query: 368 KEDLWPNPLKYF 333 +E + P + YF Sbjct: 324 RERIVPRAVLYF 335
>NP1L2_HUMAN (Q9ULW6) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 33.9 bits (76), Expect = 0.49 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 22/91 (24%) Frame = -2 Query: 632 YSITLNFSENPYFEDRKLTKSYTFADD----------GTTTINAT--SIKWKEGMEINGN 489 +++ +F N YF++ LTK+Y GT +T I W EG + Sbjct: 285 FTLEFHFKPNEYFKNELLTKTYVLKSKLAYYDPHPYRGTAIEYSTGCEIDWNEGKNVTLK 344 Query: 488 AIKKK------GSKRPLVE----ESFFTWFT 426 IKKK G+ R + E +SFF +F+ Sbjct: 345 TIKKKQKHRIWGTIRTVTEDFPKDSFFNFFS 375
>YB31_SCHPO (P78920) Putative nucleosome assembly protein C2D10.11C| Length = 379 Score = 33.1 bits (74), Expect = 0.83 Identities = 14/49 (28%), Positives = 22/49 (44%) Frame = -2 Query: 698 DQKMFKYLEXXXXXXXXXXXSGYSITLNFSENPYFEDRKLTKSYTFADD 552 D+ + + L GY + F N YF ++ LTK+Y + DD Sbjct: 188 DENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDD 236
>YDT5_SCHPO (O14210) Hypothetical protein C6B12.05c in chromosome I| Length = 295 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/89 (26%), Positives = 38/89 (42%) Frame = -2 Query: 608 ENPYFEDRKLTKSYTFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWF 429 E+ ++ +L + +D T TS K NG A K+K S+R +V+E Sbjct: 73 ESAQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLE 132 Query: 428 TDTEHKSLADGVQDEVAEIIKEDLWPNPL 342 D E S +D +DL+ NP+ Sbjct: 133 GDEEDGSFSD----------LKDLYSNPM 151
>METK_PROMP (Q7V2Y8) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 413 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = -2 Query: 554 DGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFTDTEHKSLADGV--QDEV 381 DG T + SI +K+G+ ++ N I T+H + DG+ ++E+ Sbjct: 171 DGKTQV---SIDYKKGVPVSINTI-----------------LISTQHTAEIDGITNEEEI 210 Query: 380 AEIIKEDLWPN 348 + IKEDLW N Sbjct: 211 RQKIKEDLWIN 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,679,924 Number of Sequences: 219361 Number of extensions: 1421743 Number of successful extensions: 3551 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3441 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3525 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
