ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35n11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK104069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 565 e-158
2dbj|AK069876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 565 e-158
3dbj|AK065350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
4emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4,... 410 e-111
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 410 e-111
6emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 410 e-111
7emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 410 e-111
8emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4,... 410 e-111
9gb|AY105707.1| Zea mays PCO095943 mRNA sequence 379 e-102
10gb|AY496707.1| Pandanus amaryllifolius glycerol kinase (GK) mRNA... 129 1e-26
11ref|NM_106694.2| Arabidopsis thaliana NHO1; carbohydrate kinase ... 86 2e-13
12gb|AY234854.1| Arabidopsis thaliana glycerol kinase (GLR1) mRNA,... 86 2e-13
13emb|BX813805.1|CNS0ADJ7 Arabidopsis thaliana Full-length cDNA Co... 86 2e-13
14ref|NM_001036230.1| Arabidopsis thaliana NHO1; carbohydrate kina... 82 3e-12
15gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I... 82 3e-12
16gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21... 82 3e-12
17gb|AY492004.1| Glycine max glycerol kinase (GK) mRNA, complete cds 62 3e-06
18gb|AE010293.1| Pyrococcus furiosus DSM 3638, section 168 of 173 ... 56 2e-04
19gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete se... 50 0.010
20gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete se... 50 0.010
21gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete se... 44 0.63
22gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 m... 42 2.5
23gb|AF091512.1| Homo sapiens familial mediterranean fever locus g... 42 2.5
24gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, co... 42 2.5
25gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Can... 42 2.5
26gb|AY113241.1| Drosophila melanogaster AT11581 full insert cDNA 42 2.5
27ref|NM_136881.3| Drosophila melanogaster CG13186-RA (CG13186), mRNA 42 2.5
28gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome 2R, r... 42 2.5
29gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, com... 42 2.5
30gb|AC104084.5| Homo sapiens BAC clone RP11-601I8 from 2, complet... 42 2.5
31gb|AC079609.4| Homo sapiens BAC clone RP11-105K1 from 2, complet... 42 2.5
32gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27... 42 2.5
33gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 m... 42 2.5
34emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence ... 42 2.5
35gb|AC145923.3| Pan troglodytes BAC clone RP43-10M24 from 7, comp... 40 9.9
36gb|AC159829.10| Mus musculus 10 BAC RP23-269H11 (Roswell Park Ca... 40 9.9
37gb|AC008283.3| Homo sapiens BAC clone RP11-575G1 from 7, complet... 40 9.9
38ref|XM_750961.1| Aspergillus fumigatus Af293 hypothetical protei... 40 9.9
39emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on ch... 40 9.9
40emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chr... 40 9.9
41emb|AL133343.23| Human DNA sequence from clone RP11-410N8 on chr... 40 9.9
42emb|AL627129.8| Zebrafish DNA sequence from clone RP71-1F1 in li... 40 9.9
43emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.9
44gb|AC109927.4| Homo sapiens BAC clone RP11-577B7 from 4, complet... 40 9.9
45gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer In... 40 9.9
46emb|BX321912.5| Zebrafish DNA sequence from clone DKEYP-32H12 in... 40 9.9
47gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromoso... 40 9.9
48gb|AC110077.5| Homo sapiens BAC clone RP11-331L12 from 2, comple... 40 9.9
49gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, co... 40 9.9
50gb|AC068120.6| Homo sapiens BAC clone RP11-12E9 from 2, complete... 40 9.9
51emb|Z68755.1|HSL118D5A Human DNA sequence from clone LA04NC01-11... 40 9.9
52emb|AM157709.1| Hipposideros cervinus microsatellite DNA, locus ... 40 9.9
53gb|AC164414.5| Mus musculus chromosome 1, clone RP24-75E15, comp... 40 9.9
54emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-3... 40 9.9

>dbj|AK104069.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G05, full
            insert sequence
          Length = 1843

 Score =  565 bits (285), Expect = e-158
 Identities = 465/525 (88%)
 Strand = Plus / Minus

                                                                        
Query: 197  agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
            ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 1742 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1683

                                                                        
Query: 257  ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
            ||| ||||||| || || || || || |||||||| ||  | ||||||||||||||||  
Sbjct: 1682 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1623

                                                                        
Query: 317  cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
            || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 1622 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1563

                                                                        
Query: 377  ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
            || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 1562 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1503

                                                                        
Query: 437  tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496
            ||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||||
Sbjct: 1502 tggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1443

                                                                        
Query: 497  ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1442 ccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1383

                                                                        
Query: 557  tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1382 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1323

                                                                        
Query: 617  aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676
            ||||  ||||||||||| || || || || |||||||||||||||||||| || ||||| 
Sbjct: 1322 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1263

                                                         
Query: 677  ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
            |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1262 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1218



to top

>dbj|AK069876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036K08, full
            insert sequence
          Length = 1993

 Score =  565 bits (285), Expect = e-158
 Identities = 465/525 (88%)
 Strand = Plus / Minus

                                                                        
Query: 197  agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
            ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 1883 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1824

                                                                        
Query: 257  ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
            ||| ||||||| || || || || || |||||||| ||  | ||||||||||||||||  
Sbjct: 1823 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1764

                                                                        
Query: 317  cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
            || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 1763 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1704

                                                                        
Query: 377  ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
            || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 1703 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1644

                                                                        
Query: 437  tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496
            ||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||||
Sbjct: 1643 tggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1584

                                                                        
Query: 497  ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1583 ccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1524

                                                                        
Query: 557  tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1523 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1464

                                                                        
Query: 617  aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676
            ||||  ||||||||||| || || || || |||||||||||||||||||| || ||||| 
Sbjct: 1463 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1404

                                                         
Query: 677  ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
            |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1403 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1359



to top

>dbj|AK065350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012O13, full
            insert sequence
          Length = 2141

 Score =  549 bits (277), Expect = e-153
 Identities = 463/525 (88%)
 Strand = Plus / Minus

                                                                        
Query: 197  agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
            ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 1741 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1682

                                                                        
Query: 257  ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
            ||| ||||||| || || || || || |||||||| ||  | ||||||||||||||||  
Sbjct: 1681 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1622

                                                                        
Query: 317  cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
            || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 1621 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1562

                                                                        
Query: 377  ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
            || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 1561 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1502

                                                                        
Query: 437  tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496
            |||||| |||||||||| ||||| |||||||||||||||||||| || |||| |||||||
Sbjct: 1501 tggatccgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1442

                                                                        
Query: 497  ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556
            | |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1441 ctttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1382

                                                                        
Query: 557  tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1381 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1322

                                                                        
Query: 617  aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676
            ||||  ||||||||||| || || || || |||||||||||||||||||| || ||||| 
Sbjct: 1321 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1262

                                                         
Query: 677  ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
            |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1261 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1217



to top

>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11,
              complete sequence
          Length = 134231

 Score =  410 bits (207), Expect = e-111
 Identities = 267/287 (93%)
 Strand = Plus / Plus

                                                                          
Query: 435    cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
              ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 133811 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 133870

                                                                          
Query: 495    ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554
              |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 133871 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 133930

                                                                          
Query: 555    catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 133931 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 133990

                                                                          
Query: 615    tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674
              ||||||  ||||||||||| || || || || |||||||||||||||||||| || ||||
Sbjct: 133991 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 134050

                                                             
Query: 675    atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
              | |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 134051 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 134097



 Score =  163 bits (82), Expect = 1e-36
 Identities = 202/242 (83%)
 Strand = Plus / Plus

                                                                          
Query: 197    agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
              ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 132868 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 132927

                                                                          
Query: 257    ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
              ||| ||||||| || || || || || |||||||| ||  | ||||||||||||||||  
Sbjct: 132928 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 132987

                                                                          
Query: 317    cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
              || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 132988 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 133047

                                                                          
Query: 377    ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
              || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 133048 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 133107

                
Query: 437    tg 438
              ||
Sbjct: 133108 tg 133109



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  410 bits (207), Expect = e-111
 Identities = 267/287 (93%)
 Strand = Plus / Plus

                                                                            
Query: 435      cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
                ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 32990949 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 32991008

                                                                            
Query: 495      ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554
                |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 32991009 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 32991068

                                                                            
Query: 555      catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 32991069 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 32991128

                                                                            
Query: 615      tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674
                ||||||  ||||||||||| || || || || |||||||||||||||||||| || ||||
Sbjct: 32991129 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 32991188

                                                               
Query: 675      atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
                | |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 32991189 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 32991235



 Score =  163 bits (82), Expect = 1e-36
 Identities = 202/242 (83%)
 Strand = Plus / Plus

                                                                            
Query: 197      agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
                ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 32990006 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 32990065

                                                                            
Query: 257      ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
                ||| ||||||| || || || || || |||||||| ||  | ||||||||||||||||  
Sbjct: 32990066 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 32990125

                                                                            
Query: 317      cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
                || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 32990126 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 32990185

                                                                            
Query: 377      ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
                || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 32990186 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 32990245

                  
Query: 437      tg 438
                ||
Sbjct: 32990246 tg 32990247



to top

>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete
              sequence
          Length = 123337

 Score =  410 bits (207), Expect = e-111
 Identities = 267/287 (93%)
 Strand = Plus / Plus

                                                                          
Query: 435    cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
              ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 106878 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 106937

                                                                          
Query: 495    ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554
              |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 106938 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 106997

                                                                          
Query: 555    catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 106998 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 107057

                                                                          
Query: 615    tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674
              ||||||  ||||||||||| || || || || |||||||||||||||||||| || ||||
Sbjct: 107058 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 107117

                                                             
Query: 675    atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
              | |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 107118 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 107164



 Score =  170 bits (86), Expect = 4e-39
 Identities = 203/242 (83%)
 Strand = Plus / Plus

                                                                          
Query: 197    agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
              ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 105935 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 105994

                                                                          
Query: 257    ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
              ||| ||||||| || || || || || |||||||| || || ||||||||||||||||  
Sbjct: 105995 ttcctcctgtgggcctcatccaatttcgggcggaagactgtggtgttctccttgtgcaaa 106054

                                                                          
Query: 317    cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
              || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 106055 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 106114

                                                                          
Query: 377    ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
              || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 106115 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 106174

                
Query: 437    tg 438
              ||
Sbjct: 106175 tg 106176



to top

>emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0821G03, complete
             sequence
          Length = 75285

 Score =  410 bits (207), Expect = e-111
 Identities = 267/287 (93%)
 Strand = Plus / Plus

                                                                         
Query: 435   cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
             ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 28354 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 28413

                                                                         
Query: 495   ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554
             |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 28414 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 28473

                                                                         
Query: 555   catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 28474 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 28533

                                                                         
Query: 615   tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674
             ||||||  ||||||||||| || || || || |||||||||||||||||||| || ||||
Sbjct: 28534 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 28593

                                                            
Query: 675   atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
             | |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 28594 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 28640



 Score =  170 bits (86), Expect = 4e-39
 Identities = 203/242 (83%)
 Strand = Plus / Plus

                                                                         
Query: 197   agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256
             ||||||||||||||||  ||||||||||| ||||| |||||||||||||||||| |||| 
Sbjct: 27411 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 27470

                                                                         
Query: 257   ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316
             ||| ||||||| || || || || || |||||||| || || ||||||||||||||||  
Sbjct: 27471 ttcctcctgtgggcctcatccaatttcgggcggaagactgtggtgttctccttgtgcaaa 27530

                                                                         
Query: 317   cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376
             || ||||| ||||  ||||||| |||||||||  ||||||| || ||||| || || || 
Sbjct: 27531 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 27590

                                                                         
Query: 377   ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436
             || ||||| |||||||| ||||| || || |||||||||||||||||||  |||||||||
Sbjct: 27591 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 27650

               
Query: 437   tg 438
             ||
Sbjct: 27651 tg 27652



to top

>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21,
           complete sequence
          Length = 140626

 Score =  410 bits (207), Expect = e-111
 Identities = 267/287 (93%)
 Strand = Plus / Plus

                                                                       
Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
           ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| |||||
Sbjct: 530 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 589

                                                                       
Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554
           |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 590 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 649

                                                                       
Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 650 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 709

                                                                       
Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674
           ||||||  ||||||||||| || || || || |||||||||||||||||||| || ||||
Sbjct: 710 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 769

                                                          
Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721
           | |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 770 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 816



to top

>gb|AY105707.1| Zea mays PCO095943 mRNA sequence
          Length = 491

 Score =  379 bits (191), Expect = e-102
 Identities = 308/347 (88%)
 Strand = Plus / Minus

                                                                       
Query: 368 tatgcggccccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagc 427
           ||||| || |||||||| || ||||| ||||| ||||| |||||||||||||| || |  
Sbjct: 475 tatgcagctccgagggctgtggtctctatgtcagctggtctgacaacagggctgcctaat 416

                                                                       
Query: 428 aaatcagcctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagc 487
           |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| |  
Sbjct: 415 aaatcagcctggatctgcattagaagattattaacagtagcaccaccatcaacacgcaat 356

                                                                       
Query: 488 aagaactccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggag 547
           |||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 355 aagaactctccttctgcgctctttacttctcctgcctctccagcatccttgtgcatggag 296

                                                                       
Query: 548 ctgaggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgcccc 607
           ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 295 ctgaggacatcattcacctgaaaacacatactctcgagcactgctcgagaaatgtgcccc 236

                                                                       
Query: 608 ttgttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggc 667
           || || |||||||| |||||||| ||||| || ||||| |||||||| ||||||||||| 
Sbjct: 235 ttatttgtgaaccttgtgattccgatgcaaattcccctcgcatcatctctccaccatggt 176

                                                          
Query: 668 gcgaacaatccattgaatgctggcacaaagtatatgccacctgaatc 714
           || ||||| ||||| ||||||||||||||||| |  |||||||||||
Sbjct: 175 gcaaacaacccattaaatgctggcacaaagtacactccacctgaatc 129



to top

>gb|AY496707.1| Pandanus amaryllifolius glycerol kinase (GK) mRNA, complete cds
          Length = 1596

 Score =  129 bits (65), Expect = 1e-26
 Identities = 143/169 (84%)
 Strand = Plus / Minus

                                                                        
Query: 531  catccttatgcatggagctgaggacatcattcacctgaaagcacatactctcgagcactg 590
            ||||||| ||||| ||| |||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 1258 catccttgtgcattgagttgagcacatctttcacctggaagcacatgctctctagcactg 1199

                                                                        
Query: 591  ctcgagcaatgtgccccttgttggtgaacctcgtgattcctatgcagatccccctagcat 650
            ||||||| |||||||||||||| |||||||||||||| || |  || | |||||  ||||
Sbjct: 1198 ctcgagcgatgtgccccttgtttgtgaacctcgtgatacccaaacacaccccccgtgcat 1139

                                                             
Query: 651  catccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699
            | || | |||||| || || ||||  |||||||||||||||||||||||
Sbjct: 1138 cctcacgccaccaaggtgcaaacagcccattgaatgctggcacaaagta 1090



 Score =  127 bits (64), Expect = 5e-26
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 338  gtccagactccggcagctaaccctgctgcgtatgcggccccgagggccgttgtctcaatg 397
            ||||| ||||||| |||||| || ||||| ||||| || || ||||| || |||||||||
Sbjct: 1451 gtccaaactccggtagctaatccagctgcatatgctgcaccaagggctgtagtctcaatg 1392

                                                                        
Query: 398  tcggctggcctgacaacagggctacccagcaaatcagcctggatctgcatgagaaggttg 457
            ||||| || || ||||| || ||||||| || ||||||||| |||||||| ||||| |||
Sbjct: 1391 tcggcaggtctcacaactggactacccaacagatcagcctgaatctgcatcagaagattg 1332

                                                        
Query: 458  ttaacagtagcaccaccatcaacacgtagcaagaactccccttc 501
            |||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1331 ttaacagtggcacccccatcaacacgaagcaaaaactcgccttc 1288



to top

>ref|NM_106694.2| Arabidopsis thaliana NHO1; carbohydrate kinase AT1G80460 (NHO1)
            transcript variant AT1G80460.1 mRNA, complete cds
          Length = 1761

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                        
Query: 386  gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445
            |||||||| |||||  ||||||| || || || || |||| || ||||||||| ||||||
Sbjct: 1373 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 1314

                                                                   
Query: 446  atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500
            || |||||||||||| | || |||||||||||||| |  ||||||||||||||||
Sbjct: 1313 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 1259



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 551  aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
            ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 1208 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1149

                                                                        
Query: 611  ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
            |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 1148 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1089

                                         
Query: 671  aacaatccattgaatgctggcacaaagta 699
            ||||| || ||||| ||||||||||||||
Sbjct: 1088 aacaagccgttgaacgctggcacaaagta 1060



to top

>gb|AY234854.1| Arabidopsis thaliana glycerol kinase (GLR1) mRNA, complete cds
          Length = 1766

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                        
Query: 386  gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445
            |||||||| |||||  ||||||| || || || || |||| || ||||||||| ||||||
Sbjct: 1417 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 1358

                                                                   
Query: 446  atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500
            || |||||||||||| | || |||||||||||||| |  ||||||||||||||||
Sbjct: 1357 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 1303



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 551  aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
            ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 1252 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1193

                                                                        
Query: 611  ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
            |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 1192 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1133

                                         
Query: 671  aacaatccattgaatgctggcacaaagta 699
            ||||| || ||||| ||||||||||||||
Sbjct: 1132 aacaagccgttgaacgctggcacaaagta 1104



to top

>emb|BX813805.1|CNS0ADJ7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZH07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 931

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                       
Query: 386 gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445
           |||||||| |||||  ||||||| || || || || |||| || ||||||||| ||||||
Sbjct: 586 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 527

                                                                  
Query: 446 atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500
           || |||||||||||| | || |||||||||||||| |  ||||||||||||||||
Sbjct: 526 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 472



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                       
Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
           ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 421 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 362

                                                                       
Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
           |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 361 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 302

                                        
Query: 671 aacaatccattgaatgctggcacaaagta 699
           ||||| || ||||| ||||||||||||||
Sbjct: 301 aacaagccgttgaacgctggcacaaagta 273



to top

>ref|NM_001036230.1| Arabidopsis thaliana NHO1; carbohydrate kinase AT1G80460 (NHO1)
            transcript variant AT1G80460.2 mRNA, complete cds
          Length = 1914

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 551  aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
            ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 1458 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1399

                                                                        
Query: 611  ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
            |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 1398 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1339

                                         
Query: 671  aacaatccattgaatgctggcacaaagta 699
            ||||| || ||||| ||||||||||||||
Sbjct: 1338 aacaagccgttgaacgctggcacaaagta 1310



to top

>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete
             sequence
          Length = 132990

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Plus

                                                                         
Query: 551   aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
             ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 74942 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 75001

                                                                         
Query: 611   ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
             |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 75002 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 75061

                                          
Query: 671   aacaatccattgaatgctggcacaaagta 699
             ||||| || ||||| ||||||||||||||
Sbjct: 75062 aacaagccgttgaacgctggcacaaagta 75090



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 435   cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
             |||| |||||||| |||||||||||| | || |||||||||||||| |  ||||||||||
Sbjct: 74826 cctgaatctgcatcagaaggttgttagctgtggcaccaccatcaactctgagcaagaact 74885

                   
Query: 495   cccctt 500
             ||||||
Sbjct: 74886 cccctt 74891



to top

>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete
             sequence
          Length = 89811

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                         
Query: 551   aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610
             ||||| || |||||||| || ||||| ||||| ||||| || |||||||||||   ||||
Sbjct: 71208 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 71149

                                                                         
Query: 611   ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670
             |||||||||||||||||||| ||||| |  || |  || || || |||||||| || || 
Sbjct: 71148 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 71089

                                          
Query: 671   aacaatccattgaatgctggcacaaagta 699
             ||||| || ||||| ||||||||||||||
Sbjct: 71088 aacaagccgttgaacgctggcacaaagta 71060



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 435   cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494
             |||| |||||||| |||||||||||| | || |||||||||||||| |  ||||||||||
Sbjct: 71324 cctgaatctgcatcagaaggttgttagctgtggcaccaccatcaactctgagcaagaact 71265

                   
Query: 495   cccctt 500
             ||||||
Sbjct: 71264 cccctt 71259



to top

>gb|AY492004.1| Glycine max glycerol kinase (GK) mRNA, complete cds
          Length = 1560

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 118/147 (80%)
 Strand = Plus / Minus

                                                                        
Query: 553  gacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgtt 612
            |||||| ||||| || || ||||| ||||| ||||| ||||| |||||||| |||||| |
Sbjct: 1206 gacatctttcacttggaaacacatgctctcaagcacagctcgggcaatgtgacccttgct 1147

                                                                        
Query: 613  ggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaa 672
             || ||||| || ||||| || || | ||| | |||||| || | ||||||||| || ||
Sbjct: 1146 tgtaaaccttgttattccaatacaaaccccgcgagcatcctcacgccaccatggggcaaa 1087

                                       
Query: 673  caatccattgaatgctggcacaaagta 699
            ||||||||| || || || ||||||||
Sbjct: 1086 caatccattaaaagcaggaacaaagta 1060



to top

>gb|AE010293.1| Pyrococcus furiosus DSM 3638, section 168 of 173 of the complete
            genome
          Length = 9294

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 430  atcagcctggatctgcatgagaaggttgttaacagtagcaccaccatc 477
            ||||||||||| ||||||||| | |||||||||||| || ||||||||
Sbjct: 4504 atcagcctggaactgcatgaggaagttgttaacagtggctccaccatc 4457



to top

>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence
          Length = 127018

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 452   aggttgttaacagtagcaccaccatcaac 480
             |||||||||||||| ||||||||||||||
Sbjct: 22591 aggttgttaacagttgcaccaccatcaac 22563



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 646   agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699
             ||||||||| | |||||| || || |||||||||||||| || || ||||||||
Sbjct: 22406 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 22353



to top

>gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete sequence
          Length = 110520

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 452    aggttgttaacagtagcaccaccatcaac 480
              |||||||||||||| ||||||||||||||
Sbjct: 100223 aggttgttaacagttgcaccaccatcaac 100195



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 646    agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699
              ||||||||| | |||||| || || |||||||||||||| || || ||||||||
Sbjct: 100038 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 99985



to top

>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence
          Length = 125303

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                    
Query: 646    agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699
              ||||||||| | |||||| || || |||||||||||||| || || ||||||||
Sbjct: 104611 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 104664



to top

>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete
             sequence
          Length = 208029

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   ctgacaacagggctacccagc 427
             |||||||||||||||||||||
Sbjct: 34536 ctgacaacagggctacccagc 34516



to top

>gb|AF091512.1| Homo sapiens familial mediterranean fever locus genomic sequence
          Length = 87258

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   aggagtctcctcttttcttcc 263
             |||||||||||||||||||||
Sbjct: 28078 aggagtctcctcttttcttcc 28098



to top

>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence
          Length = 218508

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 374   gccccgagggccgttgtctca 394
             |||||||||||||||||||||
Sbjct: 45020 gccccgagggccgttgtctca 45040



to top

>gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174199

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   gccccgagggccgttgtctca 394
             |||||||||||||||||||||
Sbjct: 50188 gccccgagggccgttgtctca 50168



to top

>gb|AY113241.1| Drosophila melanogaster AT11581 full insert cDNA
          Length = 800

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  aaagccaaagaagaatcgcac 98
           |||||||||||||||||||||
Sbjct: 646 aaagccaaagaagaatcgcac 626



to top

>ref|NM_136881.3| Drosophila melanogaster CG13186-RA (CG13186), mRNA
          Length = 782

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  aaagccaaagaagaatcgcac 98
           |||||||||||||||||||||
Sbjct: 646 aaagccaaagaagaatcgcac 626



to top

>gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
             BACR04E21, complete sequence
          Length = 173613

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    aaagccaaagaagaatcgcac 98
             |||||||||||||||||||||
Sbjct: 75365 aaagccaaagaagaatcgcac 75345



to top

>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence
          Length = 180354

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 243    aggagtctcctcttttcttcc 263
              |||||||||||||||||||||
Sbjct: 174367 aggagtctcctcttttcttcc 174387



to top

>gb|AC104084.5| Homo sapiens BAC clone RP11-601I8 from 2, complete sequence
          Length = 109138

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 516    ctcctgcctccccagcatcct 536
              |||||||||||||||||||||
Sbjct: 100334 ctcctgcctccccagcatcct 100354



to top

>gb|AC079609.4| Homo sapiens BAC clone RP11-105K1 from 2, complete sequence
          Length = 25769

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 107  tgtacaacacaccgtttattc 127
            |||||||||||||||||||||
Sbjct: 8490 tgtacaacacaccgtttattc 8510



to top

>gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27 of 73 of the complete
             sequence
          Length = 292919

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    aaagccaaagaagaatcgcac 98
             |||||||||||||||||||||
Sbjct: 86210 aaagccaaagaagaatcgcac 86190



to top

>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete
             sequence
          Length = 187696

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   ctgacaacagggctacccagc 427
             |||||||||||||||||||||
Sbjct: 91844 ctgacaacagggctacccagc 91864



to top

>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275,
              containing Familial Mediterranean Fever gene disease
          Length = 239566

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 243    aggagtctcctcttttcttcc 263
              |||||||||||||||||||||
Sbjct: 122074 aggagtctcctcttttcttcc 122094



to top

>gb|AC145923.3| Pan troglodytes BAC clone RP43-10M24 from 7, complete sequence
          Length = 181799

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tttcctccttcgtccagact 346
              ||||||||||||||||||||
Sbjct: 131593 tttcctccttcgtccagact 131612



to top

>gb|AC159829.10| Mus musculus 10 BAC RP23-269H11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 189452

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   atctgcatgagaaggttgtt 459
             ||||||||||||||||||||
Sbjct: 38699 atctgcatgagaaggttgtt 38718



to top

>gb|AC008283.3| Homo sapiens BAC clone RP11-575G1 from 7, complete sequence
          Length = 57287

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tttcctccttcgtccagact 346
             ||||||||||||||||||||
Sbjct: 40739 tttcctccttcgtccagact 40758



to top

>ref|XM_750961.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g17200) partial
            mRNA
          Length = 2982

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   aagaagaatcgcaccgaaat 104
            ||||||||||||||||||||
Sbjct: 1576 aagaagaatcgcaccgaaat 1595



to top

>emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on chromosome 4, complete
             sequence
          Length = 168683

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   cttctcctgcctccccagca 532
             ||||||||||||||||||||
Sbjct: 72912 cttctcctgcctccccagca 72893



to top

>emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chromosome X Contains the
            CDX4 gene for caudal type homeo box transcription factor
            4, a mortality factor 4 like 1 (MORF4L1) pseudogene, a
            mitogen-activated protein kinase kinase 4(LOC139201,
            MAP2K4) pseudogene and a ribosomal protein L7 (RPL7)
            pseudogene, complete sequence
          Length = 188281

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  aaactagagagaaaggtcag 209
            ||||||||||||||||||||
Sbjct: 7521 aaactagagagaaaggtcag 7540



to top

>emb|AL133343.23| Human DNA sequence from clone RP11-410N8 on chromosome 20 Contains
            the 5' end of two variants of the C20orf112 gene for a
            novel protein similar to nucleolar protein 4 (NOL4),
            three novel genes and a CpG island, complete sequence
          Length = 63609

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  cccagcaaatcagcctggat 441
            ||||||||||||||||||||
Sbjct: 8415 cccagcaaatcagcctggat 8396



to top

>emb|AL627129.8| Zebrafish DNA sequence from clone RP71-1F1 in linkage group 24 Contains
             a novel gene for a protein similar to acyl-CoA thioester
             hydrolases, a novel gene similar to human SAT
             (spermidine/spermine N1-acetyltransferase), two novel
             genes, three novel genes for proteins similar to arylamine
             N-acetyltransferases, a novel gene similar to human ASP
             (AKAP-associated sperm protein), the 3' part of the dap1a
             gene for death associated protein 1a and a CpG island,
             complete sequence
          Length = 141894

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tcctcttttcttcctgtgtg 269
             ||||||||||||||||||||
Sbjct: 26059 tcctcttttcttcctgtgtg 26040



to top

>emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment 13/24
          Length = 300350

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 653    tccctccaccatggcgcgaacaat 676
              |||||||||||| |||||||||||
Sbjct: 236659 tccctccaccatcgcgcgaacaat 236682



to top

>gb|AC109927.4| Homo sapiens BAC clone RP11-577B7 from 4, complete sequence
          Length = 112364

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 488   aagaactccccttctgcactcttgactt 515
             ||||| |||||||||||||| |||||||
Sbjct: 64485 aagaattccccttctgcacttttgactt 64512



to top

>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
              Library) complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    aaactagagagaaaggtcag 209
              ||||||||||||||||||||
Sbjct: 128919 aaactagagagaaaggtcag 128938



to top

>emb|BX321912.5| Zebrafish DNA sequence from clone DKEYP-32H12 in linkage group 11,
              complete sequence
          Length = 157289

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    acaaactggtccaatttacg 172
              ||||||||||||||||||||
Sbjct: 104271 acaaactggtccaatttacg 104252



to top

>gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromosome 7, complete
             sequence
          Length = 212458

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tttcctccttcgtccagact 346
             ||||||||||||||||||||
Sbjct: 19250 tttcctccttcgtccagact 19231



to top

>gb|AC110077.5| Homo sapiens BAC clone RP11-331L12 from 2, complete sequence
          Length = 18483

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   aaactagagagaaaggtcag 209
             ||||||||||||||||||||
Sbjct: 17058 aaactagagagaaaggtcag 17077



to top

>gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, complete sequence
          Length = 167647

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cagccaggtcaaatgatctc 226
             ||||||||||||||||||||
Sbjct: 27730 cagccaggtcaaatgatctc 27749



to top

>gb|AC068120.6| Homo sapiens BAC clone RP11-12E9 from 2, complete sequence
          Length = 104268

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 aaactagagagaaaggtcag 209
           ||||||||||||||||||||
Sbjct: 575 aaactagagagaaaggtcag 594



to top

>emb|Z68755.1|HSL118D5A Human DNA sequence from clone LA04NC01-118D5 on chromosome 4, complete
             sequence
          Length = 13094

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   cttctcctgcctccccagca 532
             ||||||||||||||||||||
Sbjct: 10261 cttctcctgcctccccagca 10242



to top

>emb|AM157709.1| Hipposideros cervinus microsatellite DNA, locus Hce07
          Length = 1055

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 531 catccttatgcatggagctg 550
           ||||||||||||||||||||
Sbjct: 566 catccttatgcatggagctg 585



to top

>gb|AC164414.5| Mus musculus chromosome 1, clone RP24-75E15, complete sequence
          Length = 213369

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  cagccaggtcaaatgatctc 226
            ||||||||||||||||||||
Sbjct: 6265 cagccaggtcaaatgatctc 6246



to top

>emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-365N19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159602

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    ggctggcctgacaacagggc 419
              ||||||||||||||||||||
Sbjct: 110037 ggctggcctgacaacagggc 110018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,546,895
Number of Sequences: 3902068
Number of extensions: 6546895
Number of successful extensions: 117052
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116885
Number of HSP's gapped (non-prelim): 166
length of query: 722
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 699
effective length of database: 17,143,297,704
effective search space: 11983165095096
effective search space used: 11983165095096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top