| Clone Name | rbags35n11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104069.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G05, full insert sequence Length = 1843 Score = 565 bits (285), Expect = e-158 Identities = 465/525 (88%) Strand = Plus / Minus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1742 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1683 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || | |||||||||||||||| Sbjct: 1682 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1623 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 1622 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1563 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 1562 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1503 Query: 437 tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496 ||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 1502 tggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1443 Query: 497 ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1442 ccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1383 Query: 557 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1382 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1323 Query: 617 aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676 |||| ||||||||||| || || || || |||||||||||||||||||| || ||||| Sbjct: 1322 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1263 Query: 677 ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1262 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1218
>dbj|AK069876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036K08, full insert sequence Length = 1993 Score = 565 bits (285), Expect = e-158 Identities = 465/525 (88%) Strand = Plus / Minus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1883 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1824 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || | |||||||||||||||| Sbjct: 1823 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1764 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 1763 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1704 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 1703 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1644 Query: 437 tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496 ||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 1643 tggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1584 Query: 497 ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1583 ccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1524 Query: 557 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1523 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1464 Query: 617 aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676 |||| ||||||||||| || || || || |||||||||||||||||||| || ||||| Sbjct: 1463 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1404 Query: 677 ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1403 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1359
>dbj|AK065350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012O13, full insert sequence Length = 2141 Score = 549 bits (277), Expect = e-153 Identities = 463/525 (88%) Strand = Plus / Minus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 1741 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 1682 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || | |||||||||||||||| Sbjct: 1681 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 1622 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 1621 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 1562 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 1561 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 1502 Query: 437 tggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcc 496 |||||| |||||||||| ||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 1501 tggatccgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaactcc 1442 Query: 497 ccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgaggaca 556 | |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1441 ctttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgaggaca 1382 Query: 557 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttggtg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1381 tcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttagtg 1322 Query: 617 aacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaacaat 676 |||| ||||||||||| || || || || |||||||||||||||||||| || ||||| Sbjct: 1321 aaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaacaac 1262 Query: 677 ccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1261 ccattgaatgctggaacaaagtatattccacctgaatcctgcaca 1217
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 410 bits (207), Expect = e-111 Identities = 267/287 (93%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 133811 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 133870 Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133871 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 133930 Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133931 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 133990 Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674 |||||| ||||||||||| || || || || |||||||||||||||||||| || |||| Sbjct: 133991 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 134050 Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 134051 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 134097 Score = 163 bits (82), Expect = 1e-36 Identities = 202/242 (83%) Strand = Plus / Plus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 132868 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 132927 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || | |||||||||||||||| Sbjct: 132928 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 132987 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 132988 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 133047 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 133048 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 133107 Query: 437 tg 438 || Sbjct: 133108 tg 133109
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 410 bits (207), Expect = e-111 Identities = 267/287 (93%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 32990949 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 32991008 Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 32991009 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 32991068 Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 32991069 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 32991128 Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674 |||||| ||||||||||| || || || || |||||||||||||||||||| || |||| Sbjct: 32991129 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 32991188 Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 32991189 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 32991235 Score = 163 bits (82), Expect = 1e-36 Identities = 202/242 (83%) Strand = Plus / Plus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 32990006 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 32990065 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || | |||||||||||||||| Sbjct: 32990066 ttcctcctgtgggcctcatccaatttcgggcggaagactctggtgttctccttgtgcaaa 32990125 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 32990126 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 32990185 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 32990186 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 32990245 Query: 437 tg 438 || Sbjct: 32990246 tg 32990247
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 410 bits (207), Expect = e-111 Identities = 267/287 (93%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 106878 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 106937 Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106938 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 106997 Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106998 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 107057 Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674 |||||| ||||||||||| || || || || |||||||||||||||||||| || |||| Sbjct: 107058 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 107117 Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 107118 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 107164 Score = 170 bits (86), Expect = 4e-39 Identities = 203/242 (83%) Strand = Plus / Plus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 105935 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 105994 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || || |||||||||||||||| Sbjct: 105995 ttcctcctgtgggcctcatccaatttcgggcggaagactgtggtgttctccttgtgcaaa 106054 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 106055 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 106114 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 106115 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 106174 Query: 437 tg 438 || Sbjct: 106175 tg 106176
>emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0821G03, complete sequence Length = 75285 Score = 410 bits (207), Expect = e-111 Identities = 267/287 (93%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 28354 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 28413 Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28414 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 28473 Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 28474 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 28533 Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674 |||||| ||||||||||| || || || || |||||||||||||||||||| || |||| Sbjct: 28534 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 28593 Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 28594 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 28640 Score = 170 bits (86), Expect = 4e-39 Identities = 203/242 (83%) Strand = Plus / Plus Query: 197 agagaaaggtcagccaggtcaaatgatctcgaaaccgccttgtaccaggagtctcctctt 256 |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 27411 agagaaaggtcagccaaatcaaatgatcttgaaacggccttgtaccaggagtctgctctc 27470 Query: 257 ttcttcctgtgtgcatcgtctaacttggggcggaacaccgttgtgttctccttgtgcagg 316 ||| ||||||| || || || || || |||||||| || || |||||||||||||||| Sbjct: 27471 ttcctcctgtgggcctcatccaatttcgggcggaagactgtggtgttctccttgtgcaaa 27530 Query: 317 cctgcgaatatttcctccttcgtccagactccggcagctaaccctgctgcgtatgcggcc 376 || ||||| |||| ||||||| ||||||||| ||||||| || ||||| || || || Sbjct: 27531 ccagcgaaaatttgttccttcgaccagactccaacagctaatccagctgcatacgcagct 27590 Query: 377 ccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcc 436 || ||||| |||||||| ||||| || || ||||||||||||||||||| ||||||||| Sbjct: 27591 ccaagggcagttgtctcgatgtcagcaggtctgacaacagggctacccaataaatcagcc 27650 Query: 437 tg 438 || Sbjct: 27651 tg 27652
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 410 bits (207), Expect = e-111 Identities = 267/287 (93%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 ||||||||||||||||||| ||||| |||||||||||||||||||| || |||| ||||| Sbjct: 530 cctggatctgcatgagaagattgttgacagtagcaccaccatcaacgcgcagcaggaact 589 Query: 495 ccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggagctgagga 554 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 590 ccccttctgcactcttcacttctcctgcctccccagcatccttgtgcatggagctgagga 649 Query: 555 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttgg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 650 catcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgttag 709 Query: 615 tgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaaca 674 |||||| ||||||||||| || || || || |||||||||||||||||||| || |||| Sbjct: 710 tgaaccgtgtgattcctatacatatgcctcttgcatcatccctccaccatggtgcaaaca 769 Query: 675 atccattgaatgctggcacaaagtatatgccacctgaatcctgcaca 721 | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 770 acccattgaatgctggaacaaagtatattccacctgaatcctgcaca 816
>gb|AY105707.1| Zea mays PCO095943 mRNA sequence Length = 491 Score = 379 bits (191), Expect = e-102 Identities = 308/347 (88%) Strand = Plus / Minus Query: 368 tatgcggccccgagggccgttgtctcaatgtcggctggcctgacaacagggctacccagc 427 ||||| || |||||||| || ||||| ||||| ||||| |||||||||||||| || | Sbjct: 475 tatgcagctccgagggctgtggtctctatgtcagctggtctgacaacagggctgcctaat 416 Query: 428 aaatcagcctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagc 487 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| | Sbjct: 415 aaatcagcctggatctgcattagaagattattaacagtagcaccaccatcaacacgcaat 356 Query: 488 aagaactccccttctgcactcttgacttctcctgcctccccagcatccttatgcatggag 547 |||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 355 aagaactctccttctgcgctctttacttctcctgcctctccagcatccttgtgcatggag 296 Query: 548 ctgaggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgcccc 607 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 295 ctgaggacatcattcacctgaaaacacatactctcgagcactgctcgagaaatgtgcccc 236 Query: 608 ttgttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggc 667 || || |||||||| |||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 235 ttatttgtgaaccttgtgattccgatgcaaattcccctcgcatcatctctccaccatggt 176 Query: 668 gcgaacaatccattgaatgctggcacaaagtatatgccacctgaatc 714 || ||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct: 175 gcaaacaacccattaaatgctggcacaaagtacactccacctgaatc 129
>gb|AY496707.1| Pandanus amaryllifolius glycerol kinase (GK) mRNA, complete cds Length = 1596 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Minus Query: 531 catccttatgcatggagctgaggacatcattcacctgaaagcacatactctcgagcactg 590 ||||||| ||||| ||| |||| ||||| |||||||| |||||||| ||||| ||||||| Sbjct: 1258 catccttgtgcattgagttgagcacatctttcacctggaagcacatgctctctagcactg 1199 Query: 591 ctcgagcaatgtgccccttgttggtgaacctcgtgattcctatgcagatccccctagcat 650 ||||||| |||||||||||||| |||||||||||||| || | || | ||||| |||| Sbjct: 1198 ctcgagcgatgtgccccttgtttgtgaacctcgtgatacccaaacacaccccccgtgcat 1139 Query: 651 catccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699 | || | |||||| || || |||| ||||||||||||||||||||||| Sbjct: 1138 cctcacgccaccaaggtgcaaacagcccattgaatgctggcacaaagta 1090 Score = 127 bits (64), Expect = 5e-26 Identities = 139/164 (84%) Strand = Plus / Minus Query: 338 gtccagactccggcagctaaccctgctgcgtatgcggccccgagggccgttgtctcaatg 397 ||||| ||||||| |||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct: 1451 gtccaaactccggtagctaatccagctgcatatgctgcaccaagggctgtagtctcaatg 1392 Query: 398 tcggctggcctgacaacagggctacccagcaaatcagcctggatctgcatgagaaggttg 457 ||||| || || ||||| || ||||||| || ||||||||| |||||||| ||||| ||| Sbjct: 1391 tcggcaggtctcacaactggactacccaacagatcagcctgaatctgcatcagaagattg 1332 Query: 458 ttaacagtagcaccaccatcaacacgtagcaagaactccccttc 501 |||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1331 ttaacagtggcacccccatcaacacgaagcaaaaactcgccttc 1288
>ref|NM_106694.2| Arabidopsis thaliana NHO1; carbohydrate kinase AT1G80460 (NHO1) transcript variant AT1G80460.1 mRNA, complete cds Length = 1761 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 386 gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445 |||||||| ||||| ||||||| || || || || |||| || ||||||||| |||||| Sbjct: 1373 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 1314 Query: 446 atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500 || |||||||||||| | || |||||||||||||| | |||||||||||||||| Sbjct: 1313 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 1259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 1208 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1149 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 1148 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1089 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 1088 aacaagccgttgaacgctggcacaaagta 1060
>gb|AY234854.1| Arabidopsis thaliana glycerol kinase (GLR1) mRNA, complete cds Length = 1766 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 386 gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445 |||||||| ||||| ||||||| || || || || |||| || ||||||||| |||||| Sbjct: 1417 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 1358 Query: 446 atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500 || |||||||||||| | || |||||||||||||| | |||||||||||||||| Sbjct: 1357 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 1303 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 1252 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1193 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 1192 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1133 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 1132 aacaagccgttgaacgctggcacaaagta 1104
>emb|BX813805.1|CNS0ADJ7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 931 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 386 gttgtctcaatgtcggctggcctgacaacagggctacccagcaaatcagcctggatctgc 445 |||||||| ||||| ||||||| || || || || |||| || ||||||||| |||||| Sbjct: 586 gttgtctctatgtccactggcctcaccaccggacttcccatcagatcagcctgaatctgc 527 Query: 446 atgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaactcccctt 500 || |||||||||||| | || |||||||||||||| | |||||||||||||||| Sbjct: 526 atcagaaggttgttagctgtggcaccaccatcaactctgagcaagaactcccctt 472 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 421 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 362 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 361 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 302 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 301 aacaagccgttgaacgctggcacaaagta 273
>ref|NM_001036230.1| Arabidopsis thaliana NHO1; carbohydrate kinase AT1G80460 (NHO1) transcript variant AT1G80460.2 mRNA, complete cds Length = 1914 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 1458 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 1399 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 1398 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 1339 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 1338 aacaagccgttgaacgctggcacaaagta 1310
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 74942 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 75001 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 75002 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 75061 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 75062 aacaagccgttgaacgctggcacaaagta 75090 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 |||| |||||||| |||||||||||| | || |||||||||||||| | |||||||||| Sbjct: 74826 cctgaatctgcatcagaaggttgttagctgtggcaccaccatcaactctgagcaagaact 74885 Query: 495 cccctt 500 |||||| Sbjct: 74886 cccctt 74891
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 551 aggacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttg 610 ||||| || |||||||| || ||||| ||||| ||||| || ||||||||||| |||| Sbjct: 71208 aggacgtctttcacctggaaacacatgctctccagcacagcccgagcaatgtgagacttg 71149 Query: 611 ttggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcg 670 |||||||||||||||||||| ||||| | || | || || || |||||||| || || Sbjct: 71148 ttggtgaacctcgtgattccaatgcacacaccacgtgcgtcttctctccaccaaggagca 71089 Query: 671 aacaatccattgaatgctggcacaaagta 699 ||||| || ||||| |||||||||||||| Sbjct: 71088 aacaagccgttgaacgctggcacaaagta 71060 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 435 cctggatctgcatgagaaggttgttaacagtagcaccaccatcaacacgtagcaagaact 494 |||| |||||||| |||||||||||| | || |||||||||||||| | |||||||||| Sbjct: 71324 cctgaatctgcatcagaaggttgttagctgtggcaccaccatcaactctgagcaagaact 71265 Query: 495 cccctt 500 |||||| Sbjct: 71264 cccctt 71259
>gb|AY492004.1| Glycine max glycerol kinase (GK) mRNA, complete cds Length = 1560 Score = 61.9 bits (31), Expect = 3e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 553 gacatcattcacctgaaagcacatactctcgagcactgctcgagcaatgtgccccttgtt 612 |||||| ||||| || || ||||| ||||| ||||| ||||| |||||||| |||||| | Sbjct: 1206 gacatctttcacttggaaacacatgctctcaagcacagctcgggcaatgtgacccttgct 1147 Query: 613 ggtgaacctcgtgattcctatgcagatccccctagcatcatccctccaccatggcgcgaa 672 || ||||| || ||||| || || | ||| | |||||| || | ||||||||| || || Sbjct: 1146 tgtaaaccttgttattccaatacaaaccccgcgagcatcctcacgccaccatggggcaaa 1087 Query: 673 caatccattgaatgctggcacaaagta 699 ||||||||| || || || |||||||| Sbjct: 1086 caatccattaaaagcaggaacaaagta 1060
>gb|AE010293.1| Pyrococcus furiosus DSM 3638, section 168 of 173 of the complete genome Length = 9294 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 430 atcagcctggatctgcatgagaaggttgttaacagtagcaccaccatc 477 ||||||||||| ||||||||| | |||||||||||| || |||||||| Sbjct: 4504 atcagcctggaactgcatgaggaagttgttaacagtggctccaccatc 4457
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 452 aggttgttaacagtagcaccaccatcaac 480 |||||||||||||| |||||||||||||| Sbjct: 22591 aggttgttaacagttgcaccaccatcaac 22563 Score = 44.1 bits (22), Expect = 0.63 Identities = 46/54 (85%) Strand = Plus / Minus Query: 646 agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699 ||||||||| | |||||| || || |||||||||||||| || || |||||||| Sbjct: 22406 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 22353
>gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete sequence Length = 110520 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 452 aggttgttaacagtagcaccaccatcaac 480 |||||||||||||| |||||||||||||| Sbjct: 100223 aggttgttaacagttgcaccaccatcaac 100195 Score = 44.1 bits (22), Expect = 0.63 Identities = 46/54 (85%) Strand = Plus / Minus Query: 646 agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699 ||||||||| | |||||| || || |||||||||||||| || || |||||||| Sbjct: 100038 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 99985
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 44.1 bits (22), Expect = 0.63 Identities = 46/54 (85%) Strand = Plus / Plus Query: 646 agcatcatccctccaccatggcgcgaacaatccattgaatgctggcacaaagta 699 ||||||||| | |||||| || || |||||||||||||| || || |||||||| Sbjct: 104611 agcatcatcacgccaccacggagcaaacaatccattgaaggcaggaacaaagta 104664
>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete sequence Length = 208029 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 ctgacaacagggctacccagc 427 ||||||||||||||||||||| Sbjct: 34536 ctgacaacagggctacccagc 34516
>gb|AF091512.1| Homo sapiens familial mediterranean fever locus genomic sequence Length = 87258 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 aggagtctcctcttttcttcc 263 ||||||||||||||||||||| Sbjct: 28078 aggagtctcctcttttcttcc 28098
>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence Length = 218508 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 gccccgagggccgttgtctca 394 ||||||||||||||||||||| Sbjct: 45020 gccccgagggccgttgtctca 45040
>gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174199 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 gccccgagggccgttgtctca 394 ||||||||||||||||||||| Sbjct: 50188 gccccgagggccgttgtctca 50168
>gb|AY113241.1| Drosophila melanogaster AT11581 full insert cDNA Length = 800 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 aaagccaaagaagaatcgcac 98 ||||||||||||||||||||| Sbjct: 646 aaagccaaagaagaatcgcac 626
>ref|NM_136881.3| Drosophila melanogaster CG13186-RA (CG13186), mRNA Length = 782 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 aaagccaaagaagaatcgcac 98 ||||||||||||||||||||| Sbjct: 646 aaagccaaagaagaatcgcac 626
>gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR04E21, complete sequence Length = 173613 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 aaagccaaagaagaatcgcac 98 ||||||||||||||||||||| Sbjct: 75365 aaagccaaagaagaatcgcac 75345
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence Length = 180354 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 aggagtctcctcttttcttcc 263 ||||||||||||||||||||| Sbjct: 174367 aggagtctcctcttttcttcc 174387
>gb|AC104084.5| Homo sapiens BAC clone RP11-601I8 from 2, complete sequence Length = 109138 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 ctcctgcctccccagcatcct 536 ||||||||||||||||||||| Sbjct: 100334 ctcctgcctccccagcatcct 100354
>gb|AC079609.4| Homo sapiens BAC clone RP11-105K1 from 2, complete sequence Length = 25769 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tgtacaacacaccgtttattc 127 ||||||||||||||||||||| Sbjct: 8490 tgtacaacacaccgtttattc 8510
>gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27 of 73 of the complete sequence Length = 292919 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 aaagccaaagaagaatcgcac 98 ||||||||||||||||||||| Sbjct: 86210 aaagccaaagaagaatcgcac 86190
>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 187696 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ctgacaacagggctacccagc 427 ||||||||||||||||||||| Sbjct: 91844 ctgacaacagggctacccagc 91864
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 aggagtctcctcttttcttcc 263 ||||||||||||||||||||| Sbjct: 122074 aggagtctcctcttttcttcc 122094
>gb|AC145923.3| Pan troglodytes BAC clone RP43-10M24 from 7, complete sequence Length = 181799 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tttcctccttcgtccagact 346 |||||||||||||||||||| Sbjct: 131593 tttcctccttcgtccagact 131612
>gb|AC159829.10| Mus musculus 10 BAC RP23-269H11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189452 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 atctgcatgagaaggttgtt 459 |||||||||||||||||||| Sbjct: 38699 atctgcatgagaaggttgtt 38718
>gb|AC008283.3| Homo sapiens BAC clone RP11-575G1 from 7, complete sequence Length = 57287 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tttcctccttcgtccagact 346 |||||||||||||||||||| Sbjct: 40739 tttcctccttcgtccagact 40758
>ref|XM_750961.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g17200) partial mRNA Length = 2982 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagaagaatcgcaccgaaat 104 |||||||||||||||||||| Sbjct: 1576 aagaagaatcgcaccgaaat 1595
>emb|AL645924.13| Human DNA sequence from clone RP11-503N18 on chromosome 4, complete sequence Length = 168683 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cttctcctgcctccccagca 532 |||||||||||||||||||| Sbjct: 72912 cttctcctgcctccccagca 72893
>emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chromosome X Contains the CDX4 gene for caudal type homeo box transcription factor 4, a mortality factor 4 like 1 (MORF4L1) pseudogene, a mitogen-activated protein kinase kinase 4(LOC139201, MAP2K4) pseudogene and a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 188281 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 aaactagagagaaaggtcag 209 |||||||||||||||||||| Sbjct: 7521 aaactagagagaaaggtcag 7540
>emb|AL133343.23| Human DNA sequence from clone RP11-410N8 on chromosome 20 Contains the 5' end of two variants of the C20orf112 gene for a novel protein similar to nucleolar protein 4 (NOL4), three novel genes and a CpG island, complete sequence Length = 63609 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 cccagcaaatcagcctggat 441 |||||||||||||||||||| Sbjct: 8415 cccagcaaatcagcctggat 8396
>emb|AL627129.8| Zebrafish DNA sequence from clone RP71-1F1 in linkage group 24 Contains a novel gene for a protein similar to acyl-CoA thioester hydrolases, a novel gene similar to human SAT (spermidine/spermine N1-acetyltransferase), two novel genes, three novel genes for proteins similar to arylamine N-acetyltransferases, a novel gene similar to human ASP (AKAP-associated sperm protein), the 3' part of the dap1a gene for death associated protein 1a and a CpG island, complete sequence Length = 141894 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tcctcttttcttcctgtgtg 269 |||||||||||||||||||| Sbjct: 26059 tcctcttttcttcctgtgtg 26040
>emb|BX294145.1| Pirellula sp. strain 1 complete genome; segment 13/24 Length = 300350 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 653 tccctccaccatggcgcgaacaat 676 |||||||||||| ||||||||||| Sbjct: 236659 tccctccaccatcgcgcgaacaat 236682
>gb|AC109927.4| Homo sapiens BAC clone RP11-577B7 from 4, complete sequence Length = 112364 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 488 aagaactccccttctgcactcttgactt 515 ||||| |||||||||||||| ||||||| Sbjct: 64485 aagaattccccttctgcacttttgactt 64512
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 aaactagagagaaaggtcag 209 |||||||||||||||||||| Sbjct: 128919 aaactagagagaaaggtcag 128938
>emb|BX321912.5| Zebrafish DNA sequence from clone DKEYP-32H12 in linkage group 11, complete sequence Length = 157289 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 acaaactggtccaatttacg 172 |||||||||||||||||||| Sbjct: 104271 acaaactggtccaatttacg 104252
>gb|AC151737.3| Pan troglodytes BAC clone RP43-70B8 from chromosome 7, complete sequence Length = 212458 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tttcctccttcgtccagact 346 |||||||||||||||||||| Sbjct: 19250 tttcctccttcgtccagact 19231
>gb|AC110077.5| Homo sapiens BAC clone RP11-331L12 from 2, complete sequence Length = 18483 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 aaactagagagaaaggtcag 209 |||||||||||||||||||| Sbjct: 17058 aaactagagagaaaggtcag 17077
>gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, complete sequence Length = 167647 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cagccaggtcaaatgatctc 226 |||||||||||||||||||| Sbjct: 27730 cagccaggtcaaatgatctc 27749
>gb|AC068120.6| Homo sapiens BAC clone RP11-12E9 from 2, complete sequence Length = 104268 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 aaactagagagaaaggtcag 209 |||||||||||||||||||| Sbjct: 575 aaactagagagaaaggtcag 594
>emb|Z68755.1|HSL118D5A Human DNA sequence from clone LA04NC01-118D5 on chromosome 4, complete sequence Length = 13094 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cttctcctgcctccccagca 532 |||||||||||||||||||| Sbjct: 10261 cttctcctgcctccccagca 10242
>emb|AM157709.1| Hipposideros cervinus microsatellite DNA, locus Hce07 Length = 1055 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 catccttatgcatggagctg 550 |||||||||||||||||||| Sbjct: 566 catccttatgcatggagctg 585
>gb|AC164414.5| Mus musculus chromosome 1, clone RP24-75E15, complete sequence Length = 213369 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cagccaggtcaaatgatctc 226 |||||||||||||||||||| Sbjct: 6265 cagccaggtcaaatgatctc 6246
>emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-365N19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159602 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 ggctggcctgacaacagggc 419 |||||||||||||||||||| Sbjct: 110037 ggctggcctgacaacagggc 110018 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,546,895 Number of Sequences: 3902068 Number of extensions: 6546895 Number of successful extensions: 117052 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116885 Number of HSP's gapped (non-prelim): 166 length of query: 722 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 699 effective length of database: 17,143,297,704 effective search space: 11983165095096 effective search space used: 11983165095096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)