| Clone Name | rbags36b24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HEM1_METTH (O27093) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR) | 31 | 0.97 | 2 | MDR17_ARATH (Q9M1Q9) Multidrug resistance protein 17 (P-glycopro... | 28 | 4.8 | 3 | YLS2_CAEEL (P34387) Hypothetical protein F09G8.2 precursor (EC 3... | 28 | 6.3 | 4 | O5AP2_HUMAN (Q8NGF4) Olfactory receptor 5AP2 | 28 | 8.2 |
|---|
>HEM1_METTH (O27093) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 402 Score = 30.8 bits (68), Expect = 0.97 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = -1 Query: 214 NERSYKRQSHHKAFRNKTXKNKDERSGLLKFFMRL*FCHVFHFILFSILQFTSVGN*SYI 35 N S +R+ +A N + G+++ R +FH I SI Q G+ ++ Sbjct: 332 NMESLRRREAERALNK--IMNSSDPEGVIEALSRSIVDKIFHDIAISIRQAAERGDEEFL 389 Query: 34 AVCKKLFH 11 ++C KLF+ Sbjct: 390 SMCAKLFN 397
>MDR17_ARATH (Q9M1Q9) Multidrug resistance protein 17 (P-glycoprotein 21)| Length = 1292 Score = 28.5 bits (62), Expect = 4.8 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -1 Query: 214 NERSYKRQSHHKAFRNKTXKNK---DERSGLLKFFMRL*FCHVFHFILFSILQFTSVGN 47 +E+ K +S K + KT KNK DE++ + F F F IL + +VGN Sbjct: 32 DEKELKTESDLKEEKKKTEKNKQEEDEKTKTVPFHKLFAFADSFDIILMILGTIGAVGN 90
>YLS2_CAEEL (P34387) Hypothetical protein F09G8.2 precursor (EC 3.1.-.-)| Length = 367 Score = 28.1 bits (61), Expect = 6.3 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 86 EMKNMTELQTHEKFQKSTPFIFVFXGFIPESFVVTLPLI 202 E++++TEL H K+ ++TP+I IPE + P + Sbjct: 156 EVQHLTELAEHWKYIQATPYII----NIPEKYATRFPTL 190
>O5AP2_HUMAN (Q8NGF4) Olfactory receptor 5AP2| Length = 316 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 104 LSCFSFHFVFNFTIHFGRKLIIHCSM*KVISYLC 3 LSC HF + F ++I C M +ISYLC Sbjct: 193 LSCSDTHFNGIVIMAFSSFIVISCVMIVLISYLC 226 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,221,847 Number of Sequences: 219361 Number of extensions: 441021 Number of successful extensions: 1008 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1000 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1007 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)