| Clone Name | rbags36b13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY589228.1| Poa compressa voucher PI 243216 clone 1 thioredoxin-like protein (Trx) gene, partial sequence Length = 531 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 catggcaacatgatgctcatc 144 ||||||||||||||||||||| Sbjct: 460 catggcaacatgatgctcatc 440
>ref|XM_414556.1| PREDICTED: Gallus gallus similar to Serine protease inhibitor Kazal-type 5 precursor (Lympho-epithelial Kazal-type related inhibitor) (LEKTI) (LOC416234), mRNA Length = 693 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 gagtggtgaagaagcaaac 46 ||||||||||||||||||| Sbjct: 342 gagtggtgaagaagcaaac 360
>emb|BX005426.16| Zebrafish DNA sequence from clone DKEY-1H24 in linkage group 1, complete sequence Length = 202018 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ttaccagaagcagggcatt 116 ||||||||||||||||||| Sbjct: 101328 ttaccagaagcagggcatt 101310
>gb|AC134149.2| Homo sapiens X BAC RP11-42N20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 78112 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 91 ctgcagattaccagaagcagggc 113 ||||||||||||||| ||||||| Sbjct: 10500 ctgcagattaccagatgcagggc 10478
>emb|AL139082.18| Human DNA sequence from clone RP11-248G5 on chromosome 13q14.3-21.1 Contains the 5' end of the ATP7B gene for ATPase, Cu++ transporting, beta polypeptide (Wilson disease), four novel genes, the NEK3 gene for NIMA (never in mitosis gene a)-related kinase 3, the 3' end of a novel gene and five CpG islands, complete sequence Length = 187691 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 aaactatacatatactagt 61 ||||||||||||||||||| Sbjct: 65699 aaactatacatatactagt 65717
>emb|BX640501.15| Zebrafish DNA sequence from clone CH211-117O11 in linkage group 10, complete sequence Length = 102141 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 84 ctcaagcctgcagattaccagaagcag 110 ||||||||||| |||||||||||||| Sbjct: 86599 ctcaagcctgctaattaccagaagcag 86625
>ref|XM_683796.1| PREDICTED: Danio rerio similar to Cholecystokinin type A receptor (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R) (LOC560392), mRNA Length = 1908 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ttaccagaagcagggcatt 116 ||||||||||||||||||| Sbjct: 240 ttaccagaagcagggcatt 258
>emb|AJ005762.1|PVA005762 Phaseolus vulgaris DNA for retrotransposon Tpv2-6 plus flanking host DNA Length = 5846 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 149 gattaaagcgattgaccgc 167 ||||||||||||||||||| Sbjct: 3389 gattaaagcgattgaccgc 3407
>emb|AL929045.7| Zebrafish DNA sequence from clone CH211-159J13, complete sequence Length = 167619 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ttaccagaagcagggcatt 116 ||||||||||||||||||| Sbjct: 75729 ttaccagaagcagggcatt 75747
>emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-16N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 145250 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 cagattaccagaagcaggg 112 ||||||||||||||||||| Sbjct: 45673 cagattaccagaagcaggg 45655 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,248,610 Number of Sequences: 3902068 Number of extensions: 1248610 Number of successful extensions: 79061 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79043 Number of HSP's gapped (non-prelim): 18 length of query: 178 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 156 effective length of database: 17,147,199,772 effective search space: 2674963164432 effective search space used: 2674963164432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)