ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35m13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds Length = 564 Score = 581 bits (293), Expect = e-163 Identities = 305/309 (98%) Strand = Plus / Minus Query: 249 aaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctct 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 aaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctct 502 Query: 309 tgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaa 368 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 501 tgcttcttcggtcggatgagggaactcaatctttctgtccaggcgaccagaacggagtaa 442 Query: 369 agcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcact 428 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 agcaggatcgagaatatctgcacgattggttgcagctatcacctttatcctctcatcact 382 Query: 429 gctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 322 Query: 489 actaacttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 548 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 actcacttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 262 Query: 549 gcagggggc 557 ||||||||| Sbjct: 261 gcagggggc 253
>dbj|AK103936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G01, full insert sequence Length = 1450 Score = 484 bits (244), Expect = e-133 Identities = 424/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1344 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1285 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1284 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1225 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1224 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1165 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1164 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1105 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1104 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1045 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1044 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 985 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 984 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 925 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 924 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 865 Query: 553 gggg 556 |||| Sbjct: 864 gggg 861
>dbj|AK067051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093O11, full insert sequence Length = 1397 Score = 484 bits (244), Expect = e-133 Identities = 424/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1231 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1172 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1171 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1112 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1111 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1052 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1051 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 992 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 991 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 932 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 931 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 872 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 871 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 812 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 811 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 752 Query: 553 gggg 556 |||| Sbjct: 751 gggg 748
>dbj|AK062185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E03, full insert sequence Length = 1497 Score = 484 bits (244), Expect = e-133 Identities = 424/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1331 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1272 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1271 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1212 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1211 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1152 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1151 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattccagctcgtgct 1092 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1091 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1032 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1031 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 972 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 971 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 912 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 911 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 852 Query: 553 gggg 556 |||| Sbjct: 851 gggg 848
>dbj|D17788.1|RICHTNP1 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1473 Score = 484 bits (244), Expect = e-133 Identities = 424/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1314 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1255 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1254 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1195 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1194 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1135 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1134 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1075 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1074 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1015 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1014 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 955 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 954 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 895 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 894 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 835 Query: 553 gggg 556 |||| Sbjct: 834 gggg 831
>dbj|AB037155.1| Oryza sativa (japonica cultivar-group) OsRPT5a mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5a, complete cds Length = 1510 Score = 484 bits (244), Expect = e-133 Identities = 424/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1315 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1256 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1255 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1196 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1195 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1136 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1135 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1076 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1075 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1016 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1015 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 956 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 955 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 896 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 895 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 836 Query: 553 gggg 556 |||| Sbjct: 835 gggg 832
>dbj|AK101474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040L18, full insert sequence Length = 1520 Score = 476 bits (240), Expect = e-131 Identities = 423/484 (87%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1358 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1299 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1298 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1239 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1238 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1179 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1178 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1119 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1118 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1059 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || || ||| | |||||||||||||||||||||||||| ||||| || Sbjct: 1058 ggatcaagaatgtccgcgcgactagttgcagctatcacctttatcctctcgtcactactg 999 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 998 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 939 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 938 acttcactatcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcag 879 Query: 553 gggg 556 |||| Sbjct: 878 gggg 875
>gb|BT016782.1| Zea mays clone Contig615 mRNA sequence Length = 1660 Score = 456 bits (230), Expect = e-125 Identities = 419/482 (86%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| |||||||||||||||||||||||||| ||||||||||| || || || |||||| Sbjct: 1439 gcgtagtaattcaagctggacttcttctttgcctgcacttggatgatcccctcgttgaaa 1380 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || || ||| | |||||||||||||| | |||||||| ||||||||||| || || ||| Sbjct: 1379 tcctcgtgggtaacctctgtagcatctcggcgtagagcgagcatgccagcctctacgcaa 1320 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| ||||| || |||||||||||||| |||||||| |||| ||| ||||||||| Sbjct: 1319 acagcctttagctgagcgccattgaaatcatcggttgaacgcgccaactcttcaaagttg 1260 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 ||||| |||| || ||||| || || ||||| || |||| || | |||||||||||| Sbjct: 1259 acatctggattcacattcattttcctcgagtggatctgcaggattctagctcttgcttcc 1200 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || | |||||||||||||||||||| |||||||| |||||||| | | | ||||||| Sbjct: 1199 tctgatggatgagggaactcaatcttacggtccagacgaccagatctcatcagagcagga 1140 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1139 tcaagaatatcagcacgatttgttgcagctatcacctttatcctctcatcgctgctaaat 1080 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| |||||||||||||| |||||||| || | |||||||||||| || ||||||||| Sbjct: 1079 ccatcaagctgattcagcaattccaacattgtcctttgcacttctctatcgccactaact 1020 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcagggg 555 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||| Sbjct: 1019 tcactgtcaaaacgctttgttccaatggcatcaatttcatcaataaagatgatgcacggg 960 Query: 556 gc 557 || Sbjct: 959 gc 958
>gb|AY105910.1| Zea mays PCO106969 mRNA sequence Length = 1671 Score = 456 bits (230), Expect = e-125 Identities = 419/482 (86%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| |||||||||||||||||||||||||| ||||||||||| || || || |||||| Sbjct: 1397 gcgtagtaattcaagctggacttcttctttgcctgcacttggatgatcccctcgttgaaa 1338 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || || ||| | |||||||||||||| | |||||||| ||||||||||| || || ||| Sbjct: 1337 tcctcgtgggtaacctctgtagcatctcggcgtagagcgagcatgccagcctctacgcaa 1278 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| ||||| || |||||||||||||| |||||||| |||| ||| ||||||||| Sbjct: 1277 acagcctttagctgagcgccattgaaatcatcggttgaacgcgccaactcttcaaagttg 1218 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 ||||| |||| || ||||| || || ||||| || |||| || | |||||||||||| Sbjct: 1217 acatctggattcacattcattttcctcgagtggatctgcaggattctagctcttgcttcc 1158 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || | |||||||||||||||||||| |||||||| |||||||| | | | ||||||| Sbjct: 1157 tctgatggatgagggaactcaatcttccggtccagacgaccagatctcatcagagcagga 1098 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1097 tcaagaatatcagcacgatttgttgcagctatcacctttatcctctcatcgctgctaaat 1038 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| |||||||| |||||||| || | |||||||||||| |||||||||||| Sbjct: 1037 ccatcaagctggttcagcaattccaacattgtcctttgcacttctctatcaccactaact 978 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcagggg 555 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||| Sbjct: 977 tcactgtcaaaacgctttgttccaatggcatcaatttcatcaataaagatgatgcacggg 918 Query: 556 gc 557 || Sbjct: 917 gc 916
>dbj|AB071016.1| Oryza sativa (japonica cultivar-group) OsRPT5b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5b, partial cds Length = 758 Score = 400 bits (202), Expect = e-108 Identities = 412/482 (85%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 584 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 525 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 || || ||||| |||||||||||||||| | ||| || |||||||| |||||||| ||| Sbjct: 524 aagtcctcatgagtcacctctgtagcatctcgccgcagtgcaagcataccagcttcgaca 465 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 |||||||| ||||| || || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 464 caaacagctttcagttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaa 405 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 || ||||| || | ||| ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 404 ttcacatctgggtttacattcatttttcttgagtgaatttgcaagattctagctcttgct 345 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | |||||||| ||||||||||||||||||| |||||||| || | |||||| Sbjct: 344 tcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcgcatcaaagca 285 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| ||| Sbjct: 284 ggatcaagaatgtcagcacgattcgttgccgctatgacctttatccgctcgtcactacta 225 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||| || || |||||||| ||||||||||| | || |||||||||||||||||| Sbjct: 224 aatccatcgagttggttcagcaattccaacatagtcctctgaacttctctgtcaccacta 165 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 || ||||||||||| | ||| || ||||| ||||||||||||||||| |||||||||||| Sbjct: 164 acctcactgtcaaacctcttagtcccaatggcatcaatctcatcaatgaaaatgatgcag 105 Query: 553 gg 554 || Sbjct: 104 gg 103
>dbj|AK065612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026E01, full insert sequence Length = 1571 Score = 392 bits (198), Expect = e-106 Identities = 411/482 (85%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 1378 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 1319 Query: 133 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 192 || || ||||| |||||||||||||||| | ||| || |||||||| |||||||| ||| Sbjct: 1318 aagtcctcatgagtcacctctgtagcatctcgccgcagtgcaagcataccagcttcgaca 1259 Query: 193 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 252 |||||||| |||| || || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1258 caaacagctctcagttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaa 1199 Query: 253 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 312 || ||||| || | ||| ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 1198 ttcacatctgggtttacattcatttttcttgagtgaatttgcaagattctagctcttgct 1139 Query: 313 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 372 ||||| | |||||||| ||||||||||||||||||| |||||||| || | |||||| Sbjct: 1138 tcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcgcatcaaagca 1079 Query: 373 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 432 ||||||||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| ||| Sbjct: 1078 ggatcaagaatgtcagcacgattcgttgccgctatgacctttatccgctcgtcactacta 1019 Query: 433 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 492 |||||||| || || |||||||| ||||||||||| | || |||||||||||||||||| Sbjct: 1018 aatccatcgagttggttcagcaattccaacatagtcctctgaacttctctgtcaccacta 959 Query: 493 acttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcag 552 || ||||||||||| | ||| || ||||| ||||||||||||||||| |||||||||||| Sbjct: 958 acctcactgtcaaacctcttagtcccaatggcatcaatctcatcaatgaaaatgatgcag 899 Query: 553 gg 554 || Sbjct: 898 gg 897
>gb|AY112136.1| Zea mays CL34715_1 mRNA sequence Length = 730 Score = 299 bits (151), Expect = 5e-78 Identities = 352/419 (84%) Strand = Plus / Plus Query: 124 ccttcattgaaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgcca 183 |||||||||||||| || | | |||||||||||||||| |||||| |||||||| ||| Sbjct: 229 ccttcattgaaatcctcgggagttacctctgtagcatcccgccgtagggcaagcatacca 288 Query: 184 gcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagc 243 ||||| |||||||| ||||| |||||||| || ||||| ||||||||||| ||||||| Sbjct: 289 gcttctacacaaactgcctttagctgtgctccgttgaagtcatcagttgagcgagccaat 348 Query: 244 tcctcaaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccga 303 || ||||||||||||||||||| ||| ||||| || ||||| || |||||||| || | | Sbjct: 349 tcttcaaagttgacatcaggatttacattcattttccttgaatggatttgcaagattcta 408 Query: 304 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacgg 363 |||||||||||||| | || ||||||||||||||||||||||||| || ||||| || Sbjct: 409 gctcttgcttcttcggatgggtgagggaactcaatctttcggtccaaccgtccagatcgc 468 Query: 364 agtaaagcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctca 423 | | |||||| ||||| || || ||||| || ||||||||||| |||||||| |||||| Sbjct: 469 atcagagcagggtcaaggatgtcagcacggttagttgcagctatgacctttattctctca 528 Query: 424 tcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctg 483 || ||||| |||||||| || ||||||| || |||||||| || || || |||||||| Sbjct: 529 tcgctgctgaatccatccagttgattcaataattccaacattgtccgctgaacttctcta 588 Query: 484 tcaccactaacttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaa 542 ||||| ||||||||||| |||||||| || || ||||| ||||| |||||||||||||| Sbjct: 589 tcaccgctaacttcactatcaaaacgtttggtgccaatggcatctatctcatcaataaa 647
>dbj|D88663.1| Brassica campestris mRNA for Tat binding protein 1, complete cds Length = 1433 Score = 248 bits (125), Expect = 2e-62 Identities = 386/473 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1330 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1271 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| |||||||||| ||||| | || ||||| | ||| ||||| || ||||| Sbjct: 1270 tcctcatggttcacctctgtggcatcacgacgaagagctaacataccagcctctacacat 1211 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || ||||| || ||||||||||||||||| ||||| | || ||||||||||||||| Sbjct: 1210 actgctttcagttgagcaccattgaaatcatctgttgatctcgcaagctcctcaaagttg 1151 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| || |||||||| || || || | |||||||||||| Sbjct: 1150 acgtctgggtggacattcatcttcctcgagtgaatctgtaagattctggctcttgcttct 1091 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || ||||| |||||||||||||| | ||| || ||||||||||| | | || || Sbjct: 1090 tctgttggatgtgggaactcaatcttcctgtctagccgaccagaacgcataagtgccggg 1031 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || ||||||||||| || || || ||||| |||||||| || | |||||| || || ||| Sbjct: 1030 tccagaatatctgctcggttagtggcagcaatcaccttaatacgctcatcgctactgaat 971 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| || |||| |||||||||||| | |||||||| ||||| || || ||| Sbjct: 970 ccatcaagctggttaagcagctccaacatagtcctctgcacttccctgtctccgcttact 911 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 548 |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 910 tcactgtcaaaacgctttgtaccaattgcatcgatctcatctataaagatgat 858
>ref|NM_111426.2| Arabidopsis thaliana RPT5A; ATPase/ calmodulin binding AT3G05530 (RPT5A) mRNA, complete cds Length = 1621 Score = 224 bits (113), Expect = 2e-55 Identities = 374/461 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1379 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1320 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1319 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1260 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1259 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1200 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1199 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1140 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1139 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1080 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1079 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1020 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1019 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 960 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 959 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 919
>gb|AY062705.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530; F22F7.1) mRNA, complete cds Length = 1520 Score = 224 bits (113), Expect = 2e-55 Identities = 374/461 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1378 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1319 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1318 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1259 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1258 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1199 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1198 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1139 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1138 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1079 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1078 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1019 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1018 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 959 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 958 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 918
>emb|BX842123.1|CNS09YBF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 224 bits (113), Expect = 2e-55 Identities = 374/461 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1335 gcgtagtagttcaagcttgcattcttcttggcctggacttggatgataccttcattgaag 1276 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1275 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1216 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1215 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1156 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1155 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1096 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1095 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1036 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1035 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 976 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 975 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 916 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 915 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 875
>gb|AF123394.1|AF123394 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (RPT5a) mRNA, complete cds Length = 1390 Score = 224 bits (113), Expect = 2e-55 Identities = 374/461 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1307 gcgtagtagttcaagcttgctttcttcttggcctgaacttggatgataccttcattgaag 1248 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1247 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1188 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1187 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1128 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1127 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1068 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1067 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1008 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1007 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 948 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 947 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 888 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 887 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 847
>gb|BT000140.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530) mRNA, complete cds Length = 1351 Score = 222 bits (112), Expect = 9e-55 Identities = 367/452 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1271 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1212 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1211 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1152 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1151 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1092 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1091 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1032 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1031 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 972 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 971 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 912 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 911 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 852 Query: 496 tcactgtcaaaacgctttgttccaattgcatc 527 |||||||| ||||||||||| ||||| ||||| Sbjct: 851 tcactgtcgaaacgctttgtaccaatggcatc 820
>emb|BX823732.1|CNS0A5FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 216 bits (109), Expect = 6e-53 Identities = 373/461 (80%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1346 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1287 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1286 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1227 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || ||||||| |||||| ||||| || || ||||||||||||||| Sbjct: 1226 actgctttcagctgagctccattgagatcatctgttgatcgtgcaagctcctcaaagttg 1167 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1166 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1107 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1106 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1047 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1046 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 987 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 986 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 927 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 926 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 886
>gb|DQ226970.1| Boechera divaricarpa isolate AD-26SProt mRNA sequence Length = 501 Score = 212 bits (107), Expect = 9e-52 Identities = 341/419 (81%) Strand = Plus / Plus Query: 97 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacctctgta 156 |||||||| || || |||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 83 ttcttcttggcctggacttggatgataccttcattgaagtcttcatggctcacctctgtg 142 Query: 157 gcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcacca 216 ||||| | || ||||| | ||||||||| || ||||| || || |||||||| || ||| Sbjct: 143 gcatcacggcgaagagctaacatgccagcctctacacacactgctttcagctgagctcca 202 Query: 217 ttgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttcatc 276 ||||||||||| ||||| | || ||||||||||||||||| || || | || |||||| Sbjct: 203 ttgaaatcatctgttgatcttgcaagctcctcaaagttgacgtctgggttgacattcatc 262 Query: 277 tttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaactca 336 || || |||||||| ||||| || | || ||||||||||| || || || |||||||| Sbjct: 263 ttcctcgagtgaatctgcaagattctggcccttgcttcttctgttgggtgtgggaactcg 322 Query: 337 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatctgcacgattg 396 ||||||| ||| || ||||||||||| | | || || || |||||||||||||| || Sbjct: 323 atctttctgtctagtcgaccagaacgcatgagtgctgggtccagaatatctgcacggtta 382 Query: 397 gttgcagctatcacctttatcctctcatcactgctaaatccatctagctgattcagcaac 456 || || || |||||||| || | ||||| || || ||||| || || ||||| |||||| Sbjct: 383 gtggctgcaatcaccttaatacgttcatcgctactgaatccgtcgagttgattgagcaac 442 Query: 457 tccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaacgctttgt 515 ||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 443 tccaacatagttctctgcacttccctgtctccgctgacttcactgtcaaaacgctttgt 501
>gb|DQ226751.1| Boechera divaricarpa isolate SLW-A-E11 mRNA sequence Length = 501 Score = 212 bits (107), Expect = 9e-52 Identities = 341/419 (81%) Strand = Plus / Plus Query: 97 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacctctgta 156 |||||||| || || |||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 83 ttcttcttggcctggacttggatgataccttcattgaagtcttcatggctcacctctgtg 142 Query: 157 gcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcacca 216 ||||| | || ||||| | ||||||||| || ||||| || || |||||||| || ||| Sbjct: 143 gcatcacggcgaagagctaacatgccagcctctacacacactgctttcagctgagctcca 202 Query: 217 ttgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttcatc 276 ||||||||||| ||||| | || ||||||||||||||||| || || | || |||||| Sbjct: 203 ttgaaatcatctgttgatcttgcaagctcctcaaagttgacgtctgggttgacattcatc 262 Query: 277 tttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaactca 336 || || |||||||| ||||| || | || ||||||||||| || || || |||||||| Sbjct: 263 ttcctcgagtgaatctgcaagattctggcccttgcttcttctgttgggtgtgggaactcg 322 Query: 337 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatctgcacgattg 396 ||||||| ||| || ||||||||||| | | || || || |||||||||||||| || Sbjct: 323 atctttctgtctagtcgaccagaacgcatgagtgctgggtccagaatatctgcacggtta 382 Query: 397 gttgcagctatcacctttatcctctcatcactgctaaatccatctagctgattcagcaac 456 || || || |||||||| || | ||||| || || ||||| || || ||||| |||||| Sbjct: 383 gtggctgcaatcaccttaatacgttcatcgctactgaatccgtcgagttgattgagcaac 442 Query: 457 tccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaacgctttgt 515 ||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 443 tccaacatagttctctgcacttccctgtctccgctgacttcactgtcaaaacgctttgt 501
>emb|BX823750.1|CNS0A4NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1371 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1312 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1311 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1252 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || ||||||| |||||| ||||| || || ||||||||| ||||| Sbjct: 1251 actgctttcagctgagctccattgagatcatctgttgatcgtgcaagctcctcagagttg 1192 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1191 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1132 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1131 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1072 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1071 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1012 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1011 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 952 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| | ||||||||| ||||| ||||| || ||||| Sbjct: 951 tcactgtcgagacgctttgtaccaatggcatcgatttcatc 911
>gb|AF081573.1|AF081573 Arabidopsis thaliana 19S proteasome regulatory complex subunit S6A mRNA, complete cds Length = 1275 Score = 200 bits (101), Expect = 3e-48 Identities = 371/461 (80%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1271 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1212 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1211 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1152 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || |||||||| || |||| ||||||||| || || || || ||||||||||||| | Sbjct: 1151 actgctttcagctgagctccatggaaatcatctgtggatcgtgcaagctcctcaaagtgg 1092 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1091 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1032 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1031 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 972 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 971 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 912 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 911 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 852 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 851 tcactgtcgaaacgctttgtaccaatggcatcgatttcatc 811
>emb|X74426.1|LEMA1 L.esculentum LeMA-1 mRNA for putatve Mg-dependent ATPase 1 Length = 1611 Score = 182 bits (92), Expect = 8e-43 Identities = 371/464 (79%) Strand = Plus / Minus Query: 88 aagctggacttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatc 147 ||||||| |||||||| ||||| ||||| || || ||||||||||| |||||||| | Sbjct: 1294 aagctggctttcttcttggcttgaacttgaatgataccttcattgaagtcttcatgagtt 1235 Query: 148 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 207 ||||| || ||||| | || || || |||||||| || || ||||| ||||| |||| | Sbjct: 1234 acctcagtggcatcgcgacggagtgctagcatgcctgcctcaacacatacagctttcaac 1175 Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 ||||| ||||| |||||||| || || ||||||| || |||||||| ||||| || | Sbjct: 1174 tgtgccccattaaaatcatctgtcgaccgagccaattcttcaaagttaacatctgggttg 1115 Query: 268 acgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatga 327 || ||||||||||| || || || |||| |||||||| || ||||| || || || || Sbjct: 1114 acattcatctttctggaatggatctgcaggatccgagccctggcttcctctgtggggtgg 1055 Query: 328 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatct 387 ||||| || || || || |||| |||||||| || | ||||||||||| | |||||| Sbjct: 1054 gggaattcgattttacgatccaaacgaccagatcgcatcaaagcaggatccaaaatatca 995 Query: 388 gcacgattggttgcagctatcacctttatcctctcatcactgctaaatccatctagctga 447 || | || ||||| ||||||||||| |||| ||||| |||||||| ||||| ||||| Sbjct: 994 gctctgtttgttgctgctatcaccttaatccgatcatcgctgctaaaaccatcgagctgg 935 Query: 448 ttcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaa 507 || || |||||||||||||||||||| || |||| || ||||||||||| || |||||| Sbjct: 934 ttaagtaactccaacatagttcgttggacctctcgatccccactaacttcgctatcaaaa 875 Query: 508 cgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||| || || |||||||| |||||||| ||||| ||||| Sbjct: 874 cgctttgtgcctatagcatcaatttcatcaatgaaaattatgca 831
>ref|NM_100781.3| Arabidopsis thaliana ATPase/ calmodulin binding AT1G09100 mRNA, complete cds Length = 1474 Score = 153 bits (77), Expect = 7e-34 Identities = 365/461 (79%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1324 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1265 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1264 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1205 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1204 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1145 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1144 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1085 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1084 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 1025 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 1024 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 965 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 964 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 905 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 || || |||||||||||||| || ||||| ||||||||||| Sbjct: 904 tcgctatcaaaacgctttgtccctattgcgtcaatctcatc 864
>gb|AY124813.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1272 Score = 153 bits (77), Expect = 7e-34 Identities = 365/461 (79%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1268 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1209 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1208 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1149 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1148 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1089 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1088 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1029 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1028 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 969 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 968 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 909 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 908 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 849 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 || || |||||||||||||| || ||||| ||||||||||| Sbjct: 848 tcgctatcaaaacgctttgtccctattgcgtcaatctcatc 808
>gb|AF412095.1|AF412095 Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1448 Score = 153 bits (77), Expect = 7e-34 Identities = 365/461 (79%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1297 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1238 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1237 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1178 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1177 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1118 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1117 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1058 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1057 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 998 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 997 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 938 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 937 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 878 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 || || |||||||||||||| || ||||| ||||||||||| Sbjct: 877 tcgctatcaaaacgctttgtccctattgcgtcaatctcatc 837
>gb|AY050423.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1415 Score = 153 bits (77), Expect = 7e-34 Identities = 365/461 (79%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1297 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1238 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1237 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1178 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1177 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1118 Query: 256 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 315 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1117 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1058 Query: 316 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 375 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1057 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 998 Query: 376 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 435 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 997 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 938 Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 495 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 937 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 878 Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 || || |||||||||||||| || ||||| ||||||||||| Sbjct: 877 tcgctatcaaaacgctttgtccctattgcgtcaatctcatc 837
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 409 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 468 |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| || Sbjct: 34285785 acctttatcctctcgtcactactgaatccatctagctgattcagcaactccaacattgtg 34285844 Query: 469 cgttgcacttctctgtcaccactaacttcactgt 502 || ||||||||||||||||||||||||||||||| Sbjct: 34285845 cgctgcacttctctgtcaccactaacttcactgt 34285878 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 148 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 207 |||||||||||||| | ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 34285149 acctctgtagcatctcggcgtagggcaagcatgcctgcttctacacaaacggccttcagt 34285208 Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 |||||||||||||| || || || || || |||| ||| ||||||||||||||||| | | Sbjct: 34285209 tgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaagttgacatcagggttt 34285268 Query: 268 acgttcatctttcttga 284 || ||||| |||||||| Sbjct: 34285269 acattcatttttcttga 34285285 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 291 ttgcaaaatccgagctcttgcttcttccgtcggatgagggaactcaatctttcggtccag 350 ||||||||| | ||||| ||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 34285424 ttgcaaaattctagctcgtgcttcttcggatggatgagggaactcaatttttcggtccag 34285483 Query: 351 gcgaccagaacggagtaaagcaggatcaagaatatctgcacgattggttgcagctatcac 410 | |||||| | | ||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 34285484 cctaccagacctcatcaaagcaggatcaagaatgtccgcgcgattagttgcagctatcac 34285543 Query: 411 ct 412 || Sbjct: 34285544 ct 34285545 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggggg 556 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 34285965 tcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcaggggg 34286019 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 34284734 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 34284793 Query: 133 aaatc 137 ||||| Sbjct: 34284794 aaatc 34284798
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 409 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 468 |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| || Sbjct: 121058 acctttatcctctcgtcactactgaatccatctagctgattcagcaactccaacattgtg 121117 Query: 469 cgttgcacttctctgtcaccactaacttcactgt 502 || ||||||||||||||||||||||||||||||| Sbjct: 121118 cgctgcacttctctgtcaccactaacttcactgt 121151 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 148 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 207 |||||||||||||| | ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 120422 acctctgtagcatctcggcgtagggcaagcatgcctgcttctacacaaacggccttcagt 120481 Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 |||||||||||||| || || || || || |||| ||| ||||||||||||||||| | | Sbjct: 120482 tgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaagttgacatcagggttt 120541 Query: 268 acgttcatctttcttga 284 || ||||| |||||||| Sbjct: 120542 acattcatttttcttga 120558 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 291 ttgcaaaatccgagctcttgcttcttccgtcggatgagggaactcaatctttcggtccag 350 ||||||||| | ||||| ||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 120697 ttgcaaaattctagctcgtgcttcttcggatggatgagggaactcaatttttcggtccag 120756 Query: 351 gcgaccagaacggagtaaagcaggatcaagaatatctgcacgattggttgcagctatcac 410 | |||||| | | ||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 120757 cctaccagacctcatcaaagcaggatcaagaatgtccgcgcgattagttgcagctatcac 120816 Query: 411 ct 412 || Sbjct: 120817 ct 120818 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggggg 556 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 121238 tcaaaacgctttgttccaattgcgtcaatttcatcaataaaaatgatgcaggggg 121292 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 120007 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 120066 Query: 133 aaatc 137 ||||| Sbjct: 120067 aaatc 120071
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 147 cacctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcag 206 ||||||||||||||| | ||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 3692521 cacctctgtagcatctcgccgcagtgcaagcataccagcttcgacacaaacagctttcag 3692462 Query: 207 ctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatg 266 || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| || | Sbjct: 3692461 ttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaattcacatctgggtt 3692402 Query: 267 tacgttcatctttcttgagtgaat 290 ||| ||||| |||||||||||||| Sbjct: 3692401 tacattcatttttcttgagtgaat 3692378 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 303 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| | |||||||| ||||||||||||||||||| |||||||| || Sbjct: 3692262 agctcttgcttcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcg 3692203 Query: 363 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 412 | ||||||||||||||||| || |||||||| ||||| ||||| |||| Sbjct: 3692202 catcaaagcaggatcaagaatgtcagcacgattcgttgccgctatgacct 3692153 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 409 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 468 |||||||||| ||| ||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 3691829 acctttatccgctcgtcactactaaatccatcgagttggttcagcaattccaacatagtc 3691770 Query: 469 cgttgcacttctctgtcaccactaacttcactgtca 504 | || |||||||||||||||||||| ||||||||| Sbjct: 3691769 ctctgaacttctctgtcaccactaacctcactgtca 3691734 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 499 ctgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggg 554 |||||||| | ||| || ||||| ||||||||||||||||| |||||||||||||| Sbjct: 3691602 ctgtcaaacctcttagtcccaatggcatcaatctcatcaatgaaaatgatgcaggg 3691547 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 3693141 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 3693082 Query: 133 aaatcttcatg 143 || || ||||| Sbjct: 3693081 aagtcctcatg 3693071
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 147 cacctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcag 206 ||||||||||||||| | ||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 86749 cacctctgtagcatctcgccgcagtgcaagcataccagcttcgacacaaacagctttcag 86690 Query: 207 ctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatg 266 || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| || | Sbjct: 86689 ttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaattcacatctgggtt 86630 Query: 267 tacgttcatctttcttgagtgaat 290 ||| ||||| |||||||||||||| Sbjct: 86629 tacattcatttttcttgagtgaat 86606 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 303 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| | |||||||| ||||||||||||||||||| |||||||| || Sbjct: 86490 agctcttgcttcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcg 86431 Query: 363 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 412 | ||||||||||||||||| || |||||||| ||||| ||||| |||| Sbjct: 86430 catcaaagcaggatcaagaatgtcagcacgattcgttgccgctatgacct 86381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 409 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 468 |||||||||| ||| ||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 86057 acctttatccgctcgtcactactaaatccatcgagttggttcagcaattccaacatagtc 85998 Query: 469 cgttgcacttctctgtcaccactaacttcactgtca 504 | || |||||||||||||||||||| ||||||||| Sbjct: 85997 ctctgaacttctctgtcaccactaacctcactgtca 85962 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 499 ctgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggg 554 |||||||| | ||| || ||||| ||||||||||||||||| |||||||||||||| Sbjct: 85830 ctgtcaaacctcttagtcccaatggcatcaatctcatcaatgaaaatgatgcaggg 85775 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 73 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 132 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 87369 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 87310 Query: 133 aaatcttcatg 143 || || ||||| Sbjct: 87309 aagtcctcatg 87299
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 303 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 5832 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 5891 Query: 363 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 412 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 5892 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 5941 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 177 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 236 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 5620 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 5679 Query: 237 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 284 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 5680 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 5727 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 421 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 6259 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 6318 Query: 481 ctgtcaccactaacttcactg 501 ||||| ||||| ||||||||| Sbjct: 6319 ctgtccccactcacttcactg 6339 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||||||||| ||||||||||| || ||||| ||||| || ||||| Sbjct: 6508 tcaaaacgctttgtaccaattgcatcgatttcatctataaatataatgca 6557
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 303 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 20433 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 20374 Query: 363 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 412 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 20373 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 20324 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 177 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 236 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 20645 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 20586 Query: 237 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 284 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 20585 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 20538 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 421 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 20006 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 19947 Query: 481 ctgtcaccactaacttcactg 501 ||||| ||||| ||||||||| Sbjct: 19946 ctgtccccactcacttcactg 19926 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||||||||| ||||||||||| || ||||| ||||| || ||||| Sbjct: 19757 tcaaaacgctttgtaccaattgcatcgatttcatctataaatataatgca 19708
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 303 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 30692 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 30633 Query: 363 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 412 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 30632 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 30583 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 177 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 236 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 30904 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 30845 Query: 237 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 284 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 30844 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 30797 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 421 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 30265 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 30206 Query: 481 ctgtcaccactaacttcactg 501 ||||| ||||| ||||||||| Sbjct: 30205 ctgtccccactcacttcactg 30185 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||||||||| ||||||||||| || ||||| ||||| || ||||| Sbjct: 30016 tcaaaacgctttgtaccaattgcatcgatttcatctataaatataatgca 29967
>dbj|D78490.1| Brassica rapa mRNA for human immunodeficiency virus Tat binding protein 1, partial cds Length = 308 Score = 105 bits (53), Expect = 2e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 205 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 146 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| |||||||||| ||||| | || ||||| | ||| ||||| || ||||| Sbjct: 145 tcctcatggttcacctctgtggcatcacgacgaagagctaacataccagcctctacacat 86 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || ||||| || ||||||||||||||||| ||||| | || ||||||||||||||| Sbjct: 85 actgctttcagttgagcaccattgaaatcatctgttgatctcgcaagctcctcaaagttg 26 Query: 256 acatcaggatgtacgttcatctttc 280 || || || || || |||||||||| Sbjct: 25 acgtctgggtggacattcatctttc 1
>emb|BX815750.1|CNS0AAOB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || || ||||||||| Sbjct: 1324 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccgtcattgaaa 1265 Query: 136 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 195 || |||||| ||||||| || ||||| | || || |||||||| || ||||| ||||| Sbjct: 1264 tcctcatggttcacctcagttgcatcgcggcgcagggcaagcatacccgcttcaacacac 1205 Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1204 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1145 Query: 256 ac 257 || Sbjct: 1144 ac 1143 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 370 gcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactg 429 |||||||| || ||||| |||||||| || || || || ||||| || | ||||| ||| Sbjct: 1030 gcaggatctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctg 971 Query: 430 ctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacca 489 || |||||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||| Sbjct: 970 ctgaatccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctcca 911 Query: 490 ctaacttcactgtcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||| || |||||||||||||| || ||||| ||||||||||| Sbjct: 910 ctaacttcgctatcaaaacgctttgtccctattgcgtcaatctcatc 864
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 148 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 207 |||||||| ||||| | || ||||| | |||||| || || ||||| || || |||||| Sbjct: 15025 acctctgtggcatcacggcgaagagctaacatgcctgcctctacacacactgctttcagc 15084 Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 || || |||||||||||||| ||||| || || ||||||||||||||||| || || || Sbjct: 15085 tgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttgacgtctgggtgg 15144 Query: 268 acgttcatctttcttgagtgaat 290 || |||||||| ||||||||||| Sbjct: 15145 acattcatcttccttgagtgaat 15167 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 14854 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 14913 Query: 136 tcttcatggatcacct 151 ||||||||| |||||| Sbjct: 14914 tcttcatggttcacct 14929 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 445 tgattcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgt 502 ||||| ||||||||||||||||| | |||||||| ||||| || || |||||||||| Sbjct: 15502 tgattgagcaactccaacatagtcctctgcacttccctgtctccgctgacttcactgt 15559 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 304 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 ||||| |||||||| || || || |||||||||||||||| ||| | ||||||||||| Sbjct: 15267 gctctcgcttcttcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacg 15325
>ref|XM_471556.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 322 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 381 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 845 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 786 Query: 382 atatctgcacgattggttgcagctatcacctttatcctctcat 424 | |||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 785 acttctggccgattagttgcagctattacctttatactctcat 743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 971 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 912 Query: 256 acatcagg 263 |||||||| Sbjct: 911 acatcagg 904 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 515 ttccaattgcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 661 ttccaattgcatcaatttcatcaatgaaaataatgcatggggc 619
>dbj|AK071386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092N19, full insert sequence Length = 1482 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 322 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 381 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 968 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 909 Query: 382 atatctgcacgattggttgcagctatcacctttatcctctcat 424 | |||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 908 acttctggccgattagttgcagctattacctttatactctcat 866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 1094 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 1035 Query: 256 acatcagg 263 |||||||| Sbjct: 1034 acatcagg 1027 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 515 ttccaattgcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 784 ttccaattgcatcaatttcatcaatgaaaataatgcatggggc 742
>dbj|AB044593.1| Brassica rapa BrTBP gene for Tat binding protein like protein, complete cds Length = 4780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 148 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 207 |||||||| ||||| | || ||||| | ||||||||| || ||||| || || ||||| Sbjct: 3831 acctctgtggcatcacggcgaagagctaacatgccagcctctacacatactgctttcagt 3772 Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 || || |||||||||||||| || || | || ||||||||||||||||| || || ||| Sbjct: 3771 tgagcgccattgaaatcatctgtcgatcttgcaagctcctcaaagttgacgtctgggtgt 3712 Query: 268 acgttcatctttcttgagtg 287 || |||||||| || ||||| Sbjct: 3711 acattcatcttcctcgagtg 3692 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 407 tcacctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatag 466 ||||||| || | |||||| || || |||||||| |||||||| || | ||||||||||| Sbjct: 3397 tcaccttaatacgctcatcgctactgaatccatcaagctgattaagtagctccaacatag 3338 Query: 467 ttcgttgcacttctctgtcaccactaacttcactg 501 | | |||||||| ||||| ||||| ||||||||| Sbjct: 3337 tcctctgcacttccctgtctccacttacttcactg 3303 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 304 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 362 |||||||||||||| || ||||| |||||||||||||| | ||| | ||||||||||| Sbjct: 3602 gctcttgcttcttctgttggatgtgggaactcaatcttcctgtctaatcgaccagaacg 3544 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 499 ctgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||||||||| || ||||| ||||| || |||||||| || |||||||| Sbjct: 3234 ctgtcaaaacgcttggtaccaatggcatcgatttcatcaatgaagatgatgca 3182 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 97 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacct 151 |||||||| || || |||||||| || ||||||||||| || |||||| |||||| Sbjct: 3976 ttcttcttggcctggacttggatgataccttcattgaagtcctcatggttcacct 3922
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 515 ttccaattgcatcaatctcatcaataaaaatgatgcaggg 554 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 899756 ttccaattgcatcaatttcatctataaaaatgatgcaggg 899795
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 6509 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 6450 Query: 136 tcttcatggatcacct 151 || |||||| |||||| Sbjct: 6449 tcctcatggttcacct 6434 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 172 gcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagtt 231 |||||||| || ||||| ||||| || || || || || || |||||||||||||| ||| Sbjct: 6334 gcaagcatacccgcttcaacacacactgctttgagttgagctccattgaaatcatccgtt 6275 Query: 232 gaacgagccagctcctcaaagttgac 257 || ||||| ||||| ||||| ||||| Sbjct: 6274 gaccgagcaagctcttcaaaattgac 6249 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatc 536 |||||||||||||| || ||||| ||||||||||| Sbjct: 5666 tcaaaacgctttgtccctattgcgtcaatctcatc 5632 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Minus Query: 421 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 ||||| ||||| |||||||| ||||| || |||| ||||||||| || | ||| || || Sbjct: 5824 tcatcgctgctgaatccatcaagctggttgagcagctccaacattgtcctttgtacctca 5765 Query: 481 ctgtcaccactaacttcactgt 502 | ||| ||||||||||| |||| Sbjct: 5764 cggtctccactaacttcgctgt 5743
>ref|XM_633525.1| Dictyostelium discoideum hypothetical protein (DDB0186002), partial mRNA Length = 1266 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 445 tgattcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtca 504 ||||| || ||||| ||||| || |||||||| ||||| ||||||||||| ||||| || Sbjct: 893 tgattgagtaactctaacattgtacgttgcacctctctatcaccactaacctcactatcg 834 Query: 505 aaacgctttgttccaattgcatcaatctcatcaataaa 542 ||||| || || ||||| ||||| | ||||||||||| Sbjct: 833 aaacgtttggtaccaatagcatcgagttcatcaataaa 796
>gb|AY108940.1| Zea mays PCO101909 mRNA sequence Length = 961 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||||||||||||||||| |||||||||||||| Sbjct: 352 ccatctagctgattcagcagctccaacatagttc 319
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||||||||||||||||| |||||||||||||| Sbjct: 621 ccatctagctgattcagcagctccaacatagttc 588 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| || ||||||||||||||||| Sbjct: 547 ctttgttccaacagcgtcaatctcatcaataaa 515
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 448 ttcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaa 507 |||| |||||||||||| || | |||||||| ||||||||||| || |||||||| Sbjct: 451221 ttcaacaactccaacattgtcctctgcacttccctgtcaccacttttatcgctgtcaaac 451162 Query: 508 cgctttgttccaattgcatcaatctcatcaataaaaatgat 548 | |||||||||||| ||||| | ||| || ||||||||||| Sbjct: 451161 ctctttgttccaatcgcatccaactcgtcgataaaaatgat 451121 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 177 catgccagcttccacacaaacagccttca 205 |||||| ||||| |||||||||||||||| Sbjct: 451612 catgcccgcttcaacacaaacagccttca 451584
>ref|XM_568336.1| Cryptococcus neoformans var. neoformans JEC21 endopeptidase (CNM01550) partial mRNA Length = 1487 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 448 ttcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaa 507 |||| |||||||||||| || | |||||||| ||||||||||| || |||||||| Sbjct: 1050 ttcaacaactccaacattgtcctctgcacttccctgtcaccacttttatcgctgtcaaac 991 Query: 508 cgctttgttccaattgcatcaatctcatcaataaaaatgat 548 | |||||||||||| ||||| | ||| || ||||||||||| Sbjct: 990 ctctttgttccaatcgcatccaactcgtcgataaaaatgat 950 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 177 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 236 |||||| ||||| |||||||||||||||| || ||||| || | ||| || ||||| | Sbjct: 1318 catgcccgcttcaacacaaacagccttcaattgcgcaccgttcatatcctctgttgatct 1259 Query: 237 agccagctcctcaaagttgac 257 ||||| |||||||||||||| Sbjct: 1258 agccaattcctcaaagttgac 1238
>gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:64535 IMAGE:6878698), complete cds Length = 1595 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 |||||| |||||||||||||||||||||||||| Sbjct: 910 ctttgtaccaattgcatcaatctcatcaataaa 878
>gb|AF281342.1| Oncorhynchus mykiss TAT-binding protein 1 mRNA, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 273 ||||||||||||||||| | | ||||||||||| ||||||||||||| |||||| Sbjct: 479 ccattgaaatcatcagtgcacctggccagctcctcgtagttgacatcagggctgacgttc 420 Query: 274 atctttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaac 333 ||||| | ||||||||| |||| || || |||| |||||| || | || |||||| Sbjct: 419 atcttgcgtgagtgaatctgcatgatgcgggctcgtgcttcctcattaggcattgggaac 360 Query: 334 tcaatctttcggtccaggcgaccagaacg 362 |||||||| |||||||| || |||||||| Sbjct: 359 tcaatcttacggtccagacgtccagaacg 331
>emb|CT032307.1| Platynereis dumerilii EST IB0AAA41AA12EM1 Length = 921 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 495 ttcactgtcaaaacgctttgttccaattgcatcaatctcatcaat 539 ||||||||||||||| ||||||||||| ||||| | ||||||||| Sbjct: 898 ttcactgtcaaaacgttttgttccaatagcatctaactcatcaat 854
>gb|AY750868.1| Toxoptera citricida putative 26S protease regulatory subunit 6A mRNA, complete cds Length = 1296 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 171 agcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagt 230 ||||| ||| |||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1197 agcaatcataccagcttcaacacaaacagccttgcattgtgcaccattaaaatcatcagt 1138 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Minus Query: 501 gtcaaaacgctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| ||||| ||||| ||||| | |||||||||||| Sbjct: 870 gtcaaaacgttttgtaccaatagcatccagctcatcaataaa 829
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 130391 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 130450 Query: 256 acatcagg 263 |||||||| Sbjct: 130451 acatcagg 130458 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 515 ttccaattgcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 132197 ttccaattgcatcaatttcatcaatgaaaataatgcatggggc 132239 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 322 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 381 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 130629 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 130688 Query: 382 atatctgcacgattggttgcagctatcacct 412 | |||| ||||| ||||||||||| |||| Sbjct: 130689 acttctggccgattagttgcagctattacct 130719
>emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576 Length = 35566 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaat 545 |||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 17946 tcaaaacgctttgtagcaatagcatcaatttcatcaataaaaat 17989
>ref|NM_001023428.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC576.10c), partial mRNA Length = 1170 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 502 tcaaaacgctttgttccaattgcatcaatctcatcaataaaaat 545 |||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 734 tcaaaacgctttgtagcaatagcatcaatttcatcaataaaaat 691
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 196 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 255 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 12305507 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 12305566 Query: 256 acatcagg 263 |||||||| Sbjct: 12305567 acatcagg 12305574 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 515 ttccaattgcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 12307313 ttccaattgcatcaatttcatcaatgaaaataatgcatggggc 12307355 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 322 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 381 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 12305745 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 12305804 Query: 382 atatctgcacgattggttgcagctatcacct 412 | |||| ||||| ||||||||||| |||| Sbjct: 12305805 acttctggccgattagttgcagctattacct 12305835
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299, complete sequence Length = 109465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 76 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 135 ||||||||||| | ||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 62273 gcgtaataatttaggcttgctttcttctttgcttggacttgaatgatgcctttattgaag 62214 Query: 136 tcttcatggatcacct 151 || |||||| |||||| Sbjct: 62213 tcctcatggttcacct 62198
>ref|XM_462104.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G13893g) partial mRNA Length = 1284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 457 tccaacatagttcgttgcacttctctgtcaccact 491 ||||||||||||| ||| ||||||||||||||||| Sbjct: 896 tccaacatagttctttgtacttctctgtcaccact 862
>ref|XM_745273.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit Rpt5 (Afu1g06170) partial mRNA Length = 1395 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 164 tccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaat 223 |||| ||||||| ||| || ||||||||||| || ||||||||||| |||||| ||| | Sbjct: 1300 tccggagagcaatcataccggcttccacacagacggccttcagctgcgcaccaccgaact 1241 Query: 224 catcagt 230 ||||||| Sbjct: 1240 catcagt 1234 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 326 gagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaag 380 ||||||| || ||||| |||||||| ||||| |||||||| | |||||||||||| Sbjct: 1138 gagggaattcgatcttgcggtccagtcgaccggaacggagcagagcaggatcaag 1084
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 457 tccaacatagttcgttgcacttctctgtcaccact 491 ||||||||||||| ||| ||||||||||||||||| Sbjct: 1070718 tccaacatagttctttgtacttctctgtcaccact 1070752 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 ||||||||||||| ||||| ||||||||||| Sbjct: 363840 caattgcatcaatttcatctataaaaatgat 363870
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||||||||||||||||| ||| |||||||| Sbjct: 111950 gcatcaatctcatcaataaaaacgatacagggggc 111984 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaa 542 |||||||||||||||||||| Sbjct: 1915017 gcatcaatctcatcaataaa 1915036
>gb|AF117339.1|AF117339 Nicotiana tabacum FtsH-like protein Pftf precursor (Pftf) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2346 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 367 aaagcaggatcaagaatatctgcacgattggttgc 401 ||||||| |||||||||||||||||||||||||| Sbjct: 1235 aaagcagagtcaagaatatctgcacgattggttgc 1201
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 |||||||||||| |||||||||||||||||| Sbjct: 818 caattgcatcaacctcatcaataaaaatgat 788
>gb|BC062019.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:72399 IMAGE:5620971), complete cds Length = 1630 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 273 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1325 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1266 Query: 274 atctttcttgagtg 287 ||||| | |||||| Sbjct: 1265 atcttccgtgagtg 1252
>ref|XM_391773.1| Gibberella zeae PH-1 conserved hypothetical protein (FG11597.1) partial mRNA Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 337 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaa 382 ||||| ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 1115 atcttgcggtcgagtcgaccagaacggagcaaagcaggatcgagaa 1070
>ref|XM_739971.1| Plasmodium chabaudi chabaudi 26S protease subunit regulatory subunit 6a (PC000285.05.0) partial mRNA Length = 1356 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 208 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 267 ||||||||||| ||||| ||||| || | ||||| || ||||| || ||||| |||| Sbjct: 1220 tgtgcaccattaaaatcgtcagtagatctagccaattcttcaaaattaacatctttatgt 1161 Query: 268 acgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttcttc 317 || ||||| |||||||| || ||||| ||||| | |||||||| |||||| Sbjct: 1160 acattcatttttcttgaatgtatttgtaaaattctagctcttgattcttc 1111
>gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete sequence Length = 114945 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 517 ccaattgcatcaatctcatcaataaa 542 |||||||||||||||||||||||||| Sbjct: 102520 ccaattgcatcaatctcatcaataaa 102545
>ref|XM_777098.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) (LOC576830), mRNA Length = 1164 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 181 ccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagcc 240 |||||||| |||||||| || || ||| || |||||||| ||||| || ||||||| Sbjct: 935 ccagcttctacacaaactgctttacactgagctccattgaagtcatctgtacaacgagct 876 Query: 241 agctcctcaaagttgacatcag 262 |||||||||||||| ||||||| Sbjct: 875 agctcctcaaagtttacatcag 854
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgat 548 |||||||||||||||||||||||||| Sbjct: 258762 gcatcaatctcatcaataaaaatgat 258737
>ref|XM_628150.1| Cryptosporidium parvum Iowa II predicted AFG1 ATpase family AAA ATpase (cgd1_3360), partial mRNA Length = 2160 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 507 acgctttgttccaattgcatcaatctcatcaataaaaa 544 ||||||| |||||| ||||||||| ||||||||||||| Sbjct: 1101 acgctttcttccaactgcatcaatttcatcaataaaaa 1064
>ref|NM_031595.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA Length = 1627 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 273 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1415 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1356 Query: 274 atctttcttgagtg 287 ||||| | |||||| Sbjct: 1355 atcttccgtgagtg 1342
>gb|AF220406.1|AF220406 Vitis riparia 26S proteasome regulatory ATPase subunit S10b (Rev136-3) mRNA, complete cds Length = 680 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatgcaggg 554 ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 469 ccaatggcatcaatctcatccataaaaatgatacaggg 432
>gb|AY902337.1| Mus musculus strain CAST/EiJ proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3) gene, complete cds Length = 1426 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 187 tccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcc 246 |||||||| |||||||| ||| || |||||||| |||||||| | ||||||||||| Sbjct: 1292 tccacacacacagccttgcactgggctccattgaagtcatcagtgcaccgagccagctct 1233 Query: 247 tcaaagttgacatcagga 264 ||| |||| ||||||||| Sbjct: 1232 tcatagttcacatcagga 1215
>gb|U77918.1|RNU77918 Rattus norvegicus spermatogenic cell/sperm-associated Tat-binding protein homolog Sata mRNA, complete cds Length = 1627 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 273 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1415 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1356 Query: 274 atctttcttgagtg 287 ||||| | |||||| Sbjct: 1355 atcttccgtgagtg 1342
>gb|AF397903.1| Pisum sativum AAA-metalloprotease FtsH (FTSH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2637 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 |||||||||||||||||||||||||| Sbjct: 1357 ccaattgcatcaatctcatcaataaa 1332
>dbj|D83522.1|RATTBP1E Rat liver mRNA for proteasomal ATPase (TBP1), complete cds Length = 1459 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 273 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1289 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1230 Query: 274 atctttcttgagtg 287 ||||| | |||||| Sbjct: 1229 atcttccgtgagtg 1216
>ref|NM_125854.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT5G64580 mRNA, complete cds Length = 2758 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 515 ttccaattgcatcaatctcatcaat 539 ||||||||||||||||||||||||| Sbjct: 1264 ttccaattgcatcaatctcatcaat 1240
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 181 ccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttga 233 |||||||| ||||||||||| || | |||||| ||||| ||||| |||||||| Sbjct: 158684 ccagcttcaacacaaacagcttttaactgtgctccattaaaatcgtcagttga 158632 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 495 ttcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaat 545 |||||||||||| | ||||||||||| ||||| | |||||||||||||| Sbjct: 158370 ttcactgtcaaatctttttgttccaatagcatctaattcatcaataaaaat 158320
>ref|XM_444885.1| Candida glabrata CBS138 hypothetical protein (CAGL0A02750g) partial mRNA Length = 1290 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 456 ctccaacatagttcgttgcacttctctgtcacc 488 |||||||||||||| |||||||||||| ||||| Sbjct: 906 ctccaacatagttctttgcacttctctatcacc 874
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 456 ctccaacatagttcgttgcacttctctgtcacc 488 |||||||||||||| |||||||||||| ||||| Sbjct: 288683 ctccaacatagttctttgcacttctctatcacc 288651
>emb|AL116376.1|CNS01D4W Botrytis cinerea strain T4 cDNA library Length = 540 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 328 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatct 387 |||||||||||||||| ||||| ||||| | ||| ||||||||||| || ||| |||| Sbjct: 75 gggaactcaatctttctatccagacgaccgggacgaagtaaagcagggtcgagagtatca 16 Query: 388 gcacg 392 ||||| Sbjct: 15 gcacg 11
>ref|XM_392722.2| PREDICTED: Apis mellifera similar to GA10280-PA (LOC409198), mRNA Length = 1683 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 430 ctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctct 482 ||||||||||||| ||||| | || ||||||||||| |||||||||||||| Sbjct: 1053 ctaaatccatctaattgatttaataattccaacatagtacgttgcacttctct 1001
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3 Length = 82188 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 515 ttccaattgcatcaatctcatcaat 539 ||||||||||||||||||||||||| Sbjct: 38812 ttccaattgcatcaatctcatcaat 38836
>emb|CR942586.2| Xenopus tropicalis finished cDNA, clone TGas066b09 Length = 1561 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 |||||| ||||| |||||||||||||||||||| Sbjct: 881 ctttgtaccaatcgcatcaatctcatcaataaa 849
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgcaggg 554 |||||||||||||||||||||| |||||||| Sbjct: 180810 gcatcaatctcatcaataaaaacaatgcaggg 180779
>ref|XM_524821.1| PREDICTED: Pan troglodytes similar to protease (prosome, macropain) 26S subunit, ATPase 1 (LOC469437), mRNA Length = 930 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||| ||||||||||| Sbjct: 527 tttgttccaatggcatcaatttcatcaataaa 496
>ref|XM_381781.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01605.1) partial mRNA Length = 1170 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttcgttgcacttc 479 ||||| ||||| ||||||||||||| ||| ||||| |||||||| Sbjct: 794 ccatcaagctggttcagcaactccagcatggttcgctgcacttc 751
>gb|BC060064.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone IMAGE:6418748), containing frame-shift errors Length = 2887 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1230 cgctttctgccaattgcatcaatctcatcaat 1199
>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence Length = 201185 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 38250 cgctttctgccaattgcatcaatctcatcaat 38281
>emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chromosome 1 Contains a proteasome (prosome, macropain) 26S subunit ATPase 1 (PSMC10 pseudogene, complete sequence Length = 96028 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 511 tttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||| ||||||||||| Sbjct: 24634 tttgttccaatggcatcaatttcatcaataaa 24665
>ref|NM_001015906.2| Xenopus tropicalis AFG3(ATPase family gene 3)-like 1 (yeast) (afg3l1), mRNA Length = 2845 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||| | |||| ||||||||||||||||||||| | |||||| Sbjct: 1236 cgctttctgccaactgcatcaatctcatcaataaacaagatgca 1193
>gb|BC056978.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone MGC:66836 IMAGE:6821746), complete cds Length = 4243 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1230 cgctttctgccaattgcatcaatctcatcaat 1199
>dbj|AK159647.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420027B15 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2983 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1235 cgctttctgccaattgcatcaatctcatcaat 1204
>dbj|AK168244.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730071E11 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2386 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1245 cgctttctgccaattgcatcaatctcatcaat 1214
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgcaggg 554 |||||||| |||||||||||||| |||||||| Sbjct: 270630 gcatcaatttcatcaataaaaataatgcaggg 270599
>dbj|AK167964.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730043J12 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 2503 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1246 cgctttctgccaattgcatcaatctcatcaat 1215
>gb|AF329695.1|AF329695 Mus musculus ATP-dependent zinc metalloprotease (Afg3l1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2479 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1212 cgctttctgccaattgcatcaatctcatcaat 1181
>dbj|AK006708.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700047G05 product:AFG3(ATPase family gene 3)-like 1 (yeast), full insert sequence Length = 1800 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 562 cgctttctgccaattgcatcaatctcatcaat 531
>gb|AC141881.4| Mus musculus BAC clone RP24-226C9 from chromosome 8, complete sequence Length = 142803 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 130759 cgctttctgccaattgcatcaatctcatcaat 130790
>gb|BC043320.1| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast), mRNA (cDNA clone IMAGE:5365107), containing frame-shift errors Length = 1760 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 93 cgctttctgccaattgcatcaatctcatcaat 62
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgatgc 550 |||||||| ||||||||||||||||||| Sbjct: 387908 gcatcaatttcatcaataaaaatgatgc 387935
>emb|CR926435.2| Xenopus tropicalis finished cDNA, clone TTpA010o23 Length = 2845 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaataaaaatgatgca 551 |||||| | |||| ||||||||||||||||||||| | |||||| Sbjct: 1236 cgctttctgccaactgcatcaatctcatcaataaacaagatgca 1193
>dbj|AK117044.1| Ciona intestinalis cDNA, clone:cits021n05, full insert sequence Length = 1493 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 516 tccaattgcatcaatctcatcaataaaaatgatgca 551 ||||||||||||||||||||| || || |||||||| Sbjct: 738 tccaattgcatcaatctcatccatgaatatgatgca 703
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgc 550 |||||||| ||||||||||||||||||| Sbjct: 1128470 gcatcaatttcatcaataaaaatgatgc 1128443
>gb|U59452.1|HPU59452 Helicobacter pylori HpFtsH (ftsH) gene, complete cds Length = 2100 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgc 550 |||||||| ||||||||||||||||||| Sbjct: 860 gcatcaatttcatcaataaaaatgatgc 833
>ref|NM_054070.2| Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA Length = 4243 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 508 cgctttgttccaattgcatcaatctcatcaat 539 |||||| | ||||||||||||||||||||||| Sbjct: 1230 cgctttctgccaattgcatcaatctcatcaat 1199
>gb|U97567.1|HPU97567 Helicobacter pylori sress responsive operon containing: chemotaxis response regulator (cheY), heat shock and methylase homolog (hsm), FtsH (ftsH), phosphatidyltransferase homolog (ptr), copper transporter ATPase (copA) and heavy metal-binding homolog (copP) genes, complete cds Length = 7157 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgc 550 |||||||| ||||||||||||||||||| Sbjct: 2397 gcatcaatttcatcaataaaaatgatgc 2370
>gb|U61844.1|BFU61844 Bacillus firmus hypoxanthine-guanine phosphoribosyltransferase (HGPRT) and cell division protein (FtsH) genes, complete cds Length = 3098 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 522 tgcatcaatctcatcaataaaaatgatgcagggggc 557 ||||||||||||||||||||| ||||| || ||||| Sbjct: 1558 tgcatcaatctcatcaataaagatgatacatggggc 1523
>ref|NM_001002064.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3 (psmc3), mRNA Length = 1657 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggg 554 ||||||||||| ||||| || ||||| ||||| | ||||||||| || |||||| |||| Sbjct: 955 tcactgtcaaagcgcttggtgccaatagcatccaactcatcaatgaagatgatggaggg 897 Score = 40.1 bits (20), Expect = 7.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatca 261 |||||||| |||||||| | || ||||| ||||||||||| |||||| Sbjct: 1237 ccattgaagtcatcagtacatcgtgccagttcctcaaagttcacatca 1190 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 327 agggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| || ||||| ||||| ||||| Sbjct: 1124 agggaactcaatcttacgatccagacgacctgaacg 1089
>ref|XM_631330.1| Dictyostelium discoideum HIV1 TAT-binding protein (DDB0191435), partial mRNA Length = 1212 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 |||| |||||||| ||||||||||||||||| Sbjct: 766 caatagcatcaatttcatcaataaaaatgat 736
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaat 545 ||||||||||||||||||||||| Sbjct: 1023559 gcatcaatctcatcaataaaaat 1023581
>ref|XM_467061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaat 545 ||||||||||||||||||||||| Sbjct: 617 gcatcaatctcatcaataaaaat 595
>ref|XM_467060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3060 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaat 545 ||||||||||||||||||||||| Sbjct: 1543 gcatcaatctcatcaataaaaat 1521
>gb|BC005783.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:12017 IMAGE:3603053), complete cds Length = 1534 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1308 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1258
>gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds Length = 483 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatgca 551 ||||||||||| |||||||| || ||||||||||| Sbjct: 82 ccaattgcatcgatctcatccatgaaaatgatgca 48
>ref|XM_461726.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G04763g) partial mRNA Length = 1251 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 ||||||||||||| ||||| ||||||||||| Sbjct: 796 caattgcatcaatttcatctataaaaatgat 766
>ref|NM_008948.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA Length = 1569 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1313
>ref|XM_710241.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19_5793), mRNA Length = 1236 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 |||||||||| || ||||||||||||||||| Sbjct: 781 caattgcatctatttcatcaataaaaatgat 751
>ref|XM_710176.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt3p (CaO19.13215), mRNA Length = 1236 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 |||||||||| || ||||||||||||||||| Sbjct: 781 caattgcatctatttcatcaataaaaatgat 751
>ref|XM_643135.1| Entamoeba histolytica HM-1:IMSS 26s protease regulatory subunit (507.t00004) partial mRNA Length = 864 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaat 545 ||||| ||||||||||| || |||||||||||||| Sbjct: 737 tttgtaccaattgcatctatttcatcaataaaaat 703
>ref|XM_644083.1| Entamoeba histolytica HM-1:IMSS 26S protease regulatory subunit (335.t00007) partial mRNA Length = 1269 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaat 545 ||||| ||||||||||| || |||||||||||||| Sbjct: 830 tttgtaccaattgcatctatttcatcaataaaaat 796
>gb|BC054164.1| Xenopus laevis proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:64280 IMAGE:6873792), complete cds Length = 1454 Score = 46.1 bits (23), Expect = 0.12 Identities = 77/95 (81%) Strand = Plus / Minus Query: 169 agagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatca 228 ||||||| ||| || |||||||||||||| || || ||| || ||||||||||| || Sbjct: 1241 agagcaatcattccggcttccacacaaactgctttgcactgagcgccattgaaatcgtcg 1182 Query: 229 gttgaacgagccagctcctcaaagttgacatcagg 263 || | ||||||||||||||| | || |||||||| Sbjct: 1181 gtacagcgagccagctcctcataattcacatcagg 1147 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 548 ||||||||||| | ||||| ||||| ||||||| |||||||| |||||||| Sbjct: 914 tcactgtcaaatctttttgtgccaatagcatcaagttcatcaatgaaaatgat 862
>ref|XM_652007.1| Entamoeba histolytica HM-1:IMSS 26S protease regulatory subunit (4.t00010) partial mRNA Length = 1269 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaat 545 ||||| ||||||||||| || |||||||||||||| Sbjct: 830 tttgtaccaattgcatctatttcatcaataaaaat 796
>gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, complete sequence Length = 134049 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 511 tttgttccaattgcatcaatctcatcaataaaaatgatg 549 ||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 75753 tttgtcccaattgcgtcaatttcatcaataaacatgatg 75791
>emb|AJ012165.1|CAN012165 Capsicum annuum mRNA for chloroplast protease (CACP)from the AAA atpase family Length = 2233 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 agaatatctgcacgattggttgc 401 ||||||||||||||||||||||| Sbjct: 1170 agaatatctgcacgattggttgc 1148
>gb|AC108510.3| Homo sapiens chromosome 7 clone RP11-98O9, complete sequence Length = 74746 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaatgatg 549 ||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 41755 tttgtcccaattgcgtcaatttcatcaataaacatgatg 41717
>emb|Z29366.1|SPMTS2MR S.pombe(972) mts2 mRNA for 26S protease subunit Length = 1518 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 506 aacgctttgttccaattgcatcaatctcatcaataaaaa 544 |||||||||| || || |||||||| ||||||||||||| Sbjct: 950 aacgctttgtacctatagcatcaatttcatcaataaaaa 912
>emb|AL121863.1|SPBC4 S.pombe chromosome II cosmid c4 Length = 16037 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 506 aacgctttgttccaattgcatcaatctcatcaataaaaa 544 |||||||||| || || |||||||| ||||||||||||| Sbjct: 14313 aacgctttgtacctatagcatcaatttcatcaataaaaa 14351
>gb|DQ407622.1| Physarum polycephalum CRAC-like protein mRNA, partial cds Length = 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 325 tgagggaactcaatctttcggtccagg 351 ||||||||||| ||||||||||||||| Sbjct: 102 tgagggaactccatctttcggtccagg 76
>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region associated with genomic hypomethylation, clone: O17 Length = 1085 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 520 attgcatcaatctcatcaataaaaatgatgcaggg 554 ||||||||||||||||| ||||| || |||||||| Sbjct: 641 attgcatcaatctcatccataaagattatgcaggg 675
>dbj|AK152018.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830045E17 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1370 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1158 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1108
>dbj|AK151370.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028L03 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1352 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1139 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1089
>dbj|AK168616.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920038K15 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1349 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1139 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1089
>dbj|AK168263.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730073O13 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1298 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1088 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1038
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 512 ttgttccaattgcatcaatctcatcaataaa 542 ||||||| ||||||||||||||||| ||||| Sbjct: 1170963 ttgttccgattgcatcaatctcatcgataaa 1170993
>dbj|AK167061.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029C15 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1364 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1314
>dbj|AK167002.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027D13 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1573 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1367 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1317
>ref|NM_001021391.1| Schizosaccharomyces pombe 972h- 19S proteasome regulatory protein (SPBC4.07c), partial mRNA Length = 1347 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 506 aacgctttgttccaattgcatcaatctcatcaataaaaa 544 |||||||||| || || |||||||| ||||||||||||| Sbjct: 901 aacgctttgtacctatagcatcaatttcatcaataaaaa 863
>dbj|AK002542.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011H11 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1353 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1140 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1090
>dbj|AK083043.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530037H08 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1822 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1381 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1331
>dbj|AB040858.2| Mus musculus TBP1/PSMC3 gene for proteasomal ATPase, complete cds Length = 2669 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 2363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 2313
>ref|XM_341714.2| PREDICTED: Rattus norvegicus AFG3(ATPase family gene 3)-like 1 (yeast) (predicted) (Afg3l1_predicted), mRNA Length = 2605 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaat 539 ||||||||||||||||||||||| Sbjct: 1221 ccaattgcatcaatctcatcaat 1199
>gb|AF270040.1|AF270040 Staphylococcus epidermidis strain SR1 clone step.1043e03 genomic sequence Length = 3246 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||| ||||||||||||||||| || ||||| Sbjct: 2394 gcatcaatttcatcaataaaaatgatacatggggc 2428
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 520 attgcatcaatctcatcaataaa 542 ||||||||||||||||||||||| Sbjct: 1600217 attgcatcaatctcatcaataaa 1600239 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaa 542 ||||||||||||||||||||||| Sbjct: 612065 attgcatcaatctcatcaataaa 612043
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||| ||||||||||||||||| || ||||| Sbjct: 141474 gcatcaatttcatcaataaaaatgatacatggggc 141440
>emb|X80755.1|CAPFTF C.annuum mRNA for PFTF (plastid fusion and/or translation factor Length = 2197 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 379 agaatatctgcacgattggttgc 401 ||||||||||||||||||||||| Sbjct: 1148 agaatatctgcacgattggttgc 1126
>dbj|AK069509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020K03, full insert sequence Length = 3059 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaat 545 ||||||||||||||||||||||| Sbjct: 1543 gcatcaatctcatcaataaaaat 1521
>gb|BC071390.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone MGC:86713 IMAGE:6896890), complete cds Length = 1657 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatgcaggg 554 ||||||||||| ||||| || ||||| ||||| | ||||||||| || |||||| |||| Sbjct: 955 tcactgtcaaagcgcttggtgccaatagcatccaactcatcaatgaagatgatggaggg 897 Score = 40.1 bits (20), Expect = 7.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatca 261 |||||||| |||||||| | || ||||| ||||||||||| |||||| Sbjct: 1237 ccattgaagtcatcagtacatcgtgccagttcctcaaagttcacatca 1190 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 327 agggaactcaatctttcggtccaggcgaccagaacg 362 ||||||||||||||| || ||||| ||||| ||||| Sbjct: 1124 agggaactcaatcttacgatccagacgacctgaacg 1089
>dbj|AK058221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G01, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaat 545 ||||||||||||||||||||||| Sbjct: 617 gcatcaatctcatcaataaaaat 595
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgatgcagggggc 557 |||||||| ||||||||||||||||| || ||||| Sbjct: 2346389 gcatcaatttcatcaataaaaatgatacatggggc 2346423
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 515 ttccaattgcatcaatctcatcaataaaaat 545 ||||||| |||||||| |||||||||||||| Sbjct: 800977 ttccaatggcatcaatttcatcaataaaaat 801007 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tgcatcaatctcatcaataaaaat 545 |||||||||||| ||||||||||| Sbjct: 856303 tgcatcaatctcgtcaataaaaat 856326
>emb|AL691439.8| Mouse DNA sequence from clone RP23-263H8 on chromosome 2, complete sequence Length = 30770 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 10711 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 10661
>gb|L16578.1|DDITATBPA Dictyostelium discoideum HIV1 TAT-binding protein homologous protein mRNA, complete cds Length = 1383 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaatgat 548 |||| |||||||| ||||||||||||||||| Sbjct: 936 caatagcatcaatttcatcaataaaaatgat 906
>dbj|D49686.1| Mus musculus mRNA for Tat binding protein-1, complete cds Length = 1569 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 214 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 264 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1313
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 |||||||||||||| ||||||||||| Sbjct: 147603 ccaattgcatcaatttcatcaataaa 147578
>ref|XM_457903.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C05654g) partial mRNA Length = 1302 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 457 tccaacatagttcgttgcacttctctgtcaccac 490 ||||||||||||| ||| |||||||| ||||||| Sbjct: 911 tccaacatagttctttggacttctctttcaccac 878
>gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subunit RPT4a-like protein mRNA, complete cds Length = 1567 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatgcaggg 554 ||||||||||| |||||||| || || ||||||||||| Sbjct: 800 ccaattgcatctatctcatccatgaatatgatgcaggg 763
>gb|AY574576.1| Cricetulus griseus ATPase 3 mRNA, partial cds Length = 461 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 gggaactcaatctttcggtccaggcg 353 |||||||||||||| ||||||||||| Sbjct: 134 gggaactcaatcttgcggtccaggcg 109
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 10437293 ccatccagctgattaagcaactccaacatggttc 10437260 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| | |||||||||||| |||||||| Sbjct: 10437086 ctttgttccgactgcatcaatctcgtcaataaa 10437054
>emb|AJ635223.1| Pisum sativum mRNA for ftsH-like protease (ftsh4 gene) Length = 2683 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 1287 ccaatagcatcaatctcatcaataaa 1262
>ref|XM_537239.2| PREDICTED: Canis familiaris similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC480117), mRNA Length = 2868 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 519 aattgcatcaatctcatcaataaaaa 544 |||||||||||| ||||||||||||| Sbjct: 1308 aattgcatcaatttcatcaataaaaa 1283
>emb|CR932959.2| Medicago truncatula chromosome 5 clone mte1-55f11, COMPLETE SEQUENCE Length = 102868 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 70166 ccaatagcatcaatctcatcaataaa 70191
>ref|XM_760724.1| Theileria parva strain Muguga chromosome 1 26S proteasome subunit (TP01_0290) partial mRNA Length = 1423 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgatg 549 ||||||||||| | ||| || ||||| ||||| |||||||| || ||||||||| Sbjct: 984 tcactgtcaaatctcttcgtaccaatcgcatctatctcatctatgaaaatgatg 931
>ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit 4 protein (PY00768) partial mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaa 544 ||||| |||| ||||||||| ||||||||||||| Sbjct: 899 tttgtaccaactgcatcaatttcatcaataaaaa 866
>ref|XM_947738.1| Theileria annulata strain Ankara 26S proteasome ATPase subunit (TA09310) partial mRNA Length = 1347 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| Sbjct: 893 ccaattgcatctatctcatcaataaa 868
>emb|CR682051.1|CNS0FP7Z Tetraodon nigroviridis full-length cDNA Length = 1401 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cgagccagctcctcaaagttgacatc 260 ||||||||||||||| |||||||||| Sbjct: 1122 cgagccagctcctcatagttgacatc 1097
>ref|XM_736668.1| Plasmodium chabaudi chabaudi 26S proteasome regulatory subunit 4 (PC000434.02.0) partial mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 511 tttgttccaattgcatcaatctcatcaataaaaa 544 ||||| |||| ||||||||| ||||||||||||| Sbjct: 437 tttgtaccaactgcatcaatttcatcaataaaaa 404
>emb|CR670119.1|CNS0FG19 Tetraodon nigroviridis full-length cDNA Length = 1359 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cgagccagctcctcaaagttgacatc 260 ||||||||||||||| |||||||||| Sbjct: 1103 cgagccagctcctcatagttgacatc 1078
>emb|CR637742.2|CNS0ER1W Tetraodon nigroviridis full-length cDNA Length = 1397 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cgagccagctcctcaaagttgacatc 260 ||||||||||||||| |||||||||| Sbjct: 1132 cgagccagctcctcatagttgacatc 1107
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 30005 ccaatagcatcaatctcatcaataaa 29980 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||||| |||||||||||||||||| Sbjct: 20459 ccaattgaatcaatctcatcaataaa 20484
>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence Length = 83007 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 68816 ccaatagcatcaatctcatcaataaa 68791
>ref|XM_791137.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5289-PA (LOC591581), mRNA Length = 1396 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaat 539 |||||||||||| ||||| ||||||||||| Sbjct: 952 ctttgttccaatagcatcgatctcatcaat 923
>ref|XM_502605.1| Yarrowia lipolytica CLIB122, YALI0D09119g predicted mRNA Length = 1242 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gagggaactcaatctttcggtc 347 |||||||||||||||||||||| Sbjct: 988 gagggaactcaatctttcggtc 967
>ref|XM_502714.1| Yarrowia lipolytica CLIB122, YALI0D11770g predicted mRNA Length = 1215 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 328 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 377 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 950 gggaactcgatctttcggtccagtcgaccgggacgcagcagagcaggatc 901
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 93846 ccatccagctgattaagcaactccaacatggttc 93813 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| | |||||||||||| |||||||| Sbjct: 93639 ctttgttccgactgcatcaatctcgtcaataaa 93607
>ref|XM_969766.1| PREDICTED: Tribolium castaneum similar to CG5289-PA (LOC663731), mRNA Length = 1377 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaa 544 |||||||||||||||||||||| Sbjct: 920 gcatcaatctcatcaataaaaa 899
>ref|XM_779058.1| PREDICTED: Strongylocentrotus purpuratus similar to for proteasomal ATPase (SUG1) (LOC578921), mRNA Length = 1244 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gagggaactcaatctttcggtc 347 |||||||||||||||||||||| Sbjct: 960 gagggaactcaatctttcggtc 939
>gb|AC124854.2| Homo sapiens chromosome 5 clone RP11-133F8, complete sequence Length = 149205 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ttaaacttattccaataaaaat 25 |||||||||||||||||||||| Sbjct: 87862 ttaaacttattccaataaaaat 87841
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 457 tccaacatagttcgttgcacttctctgtcaccac 490 ||||||||||||| ||| |||||||| ||||||| Sbjct: 465790 tccaacatagttctttggacttctctttcaccac 465823
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgat 548 |||||||||||||||||||| ||||| Sbjct: 52597 gcatcaatctcatcaataaagatgat 52622
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 tccaattgcatcaatctcatcaataaaaat 545 |||||||||||| ||||| ||||||||||| Sbjct: 194533 tccaattgcatctatctcgtcaataaaaat 194504
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 512 ttgttccaattgcatcaatctcatcaataaaaat 545 ||||||| ||||||||||| ||||| |||||||| Sbjct: 100006 ttgttcctattgcatcaatttcatccataaaaat 100039 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 516 tccaattgcatcaatctcatcaataaaaatgatgca 551 |||||||||||||| |||||| ||||| || ||||| Sbjct: 75431 tccaattgcatcaacctcatcgataaatataatgca 75396
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 328 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 377 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 1872819 gggaactcgatctttcggtccagacgacctggacgcagcagagcaggatc 1872770
>gb|AE010283.1| Pyrococcus furiosus DSM 3638, section 158 of 173 of the complete genome Length = 10991 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 caattgcatcaatctcatcaat 539 |||||||||||||||||||||| Sbjct: 2687 caattgcatcaatctcatcaat 2708
>ref|XM_625767.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase (cgd4_1730), partial mRNA Length = 2676 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 tccaattgcatcaatctcatcaataaaaat 545 ||||||||||||||| ||||||| |||||| Sbjct: 2013 tccaattgcatcaatttcatcaaaaaaaat 1984
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 10435394 ccatccagctgattaagcaactccaacatggttc 10435361 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| | |||||||||||| |||||||| Sbjct: 10435187 ctttgttccgactgcatcaatctcgtcaataaa 10435155
>gb|AY967593.1| Schmidtea mediterranea clone NBE.3.05B mRNA sequence Length = 999 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 tttgttccaattgcatcaatctcatcaataaaaa 544 |||||||||| |||||| || ||||||||||||| Sbjct: 491 tttgttccaactgcatcgatttcatcaataaaaa 524
>gb|AY032630.1| Oncorhynchus mykiss NADH dehydrogenase subunit 5 (ND5) and NADH dehydrogenase subunit 6 (ND6) genes, complete cds; tRNA-Glu gene, complete sequence; cytochrome b (Cytb) gene, complete cds; and tRNA-Thr and tRNA-Pro genes, complete sequence; mitochondrial genes for mitochondrial products Length = 4713 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cttctttgcttgcacttggata 120 |||||||||||||||||||||| Sbjct: 4309 cttctttgcttgcacttggata 4288
>dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasome AAA-ATPase subunit RPT4a, complete cds Length = 1484 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatgcaggg 554 ||||||||||| |||||||| || || ||||||||||| Sbjct: 788 ccaattgcatctatctcatccatgaatatgatgcaggg 751
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 1061 ccatccagctgattaagcaactccaacatggttc 1028 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| | |||||||||||| |||||||| Sbjct: 987 ctttgttccgactgcatcaatctcgtcaataaa 955
>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full insert sequence Length = 651 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 72 ccatccagctgattaagcaactccaacatggttc 39
>dbj|AK112581.1| Ciona intestinalis cDNA, clone:cicl061h02, full insert sequence Length = 1644 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 939 ccaatggcatcaatctcatcaataaa 914
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 525 atcaatctcatcaataaaaatgatgc 550 |||||||||||||||||||| ||||| Sbjct: 1670291 atcaatctcatcaataaaaacgatgc 1670266
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||| |||||||||||||||||||| Sbjct: 110765 ccaatagcatcaatctcatcaataaa 110740 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 ccaattgcatcaatctcatcaataaa 542 ||||||| |||||||||||||||||| Sbjct: 101219 ccaattgaatcaatctcatcaataaa 101244
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 328 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 377 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 1459650 gggaactcgatctttcggtccagtcgaccgggacgcagcagagcaggatc 1459699 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 gagggaactcaatctttcggtc 347 |||||||||||||||||||||| Sbjct: 1160145 gagggaactcaatctttcggtc 1160166
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactccaacatagttc 469 ||||| |||||||| |||||||||||||| |||| Sbjct: 1005 ccatccagctgattaagcaactccaacatggttc 972 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||| | |||||||||||| |||||||| Sbjct: 931 ctttgttccgactgcatcaatctcgtcaataaa 899
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgca 551 ||||||| ||||||||||||||| ||||| Sbjct: 828386 gcatcaagctcatcaataaaaataatgca 828358
>ref|XM_635235.1| Dictyostelium discoideum hypothetical protein (DDB0218364), partial mRNA Length = 2604 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaaaatgat 548 ||||||||||| ||||| ||||||||||| Sbjct: 962 attgcatcaatttcatcgataaaaatgat 934
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 523 gcatcaatctcatcaataaaaatgatgca 551 |||||||| |||||||||||||| ||||| Sbjct: 454709 gcatcaatttcatcaataaaaataatgca 454737
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 995 ctttgttccaacagcatcaatctcatcgataaa 963
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 994 ctttgttccaacagcatcaatctcatcgataaa 962
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 994 ctttgttccaacagcatcaatctcatcgataaa 962
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgcatcaatctcatcaataaa 542 ||||||||||||||||||||| Sbjct: 114050 tgcatcaatctcatcaataaa 114070
>ref|XM_419391.1| PREDICTED: Gallus gallus similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC421326), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaaaa 544 |||||||||||||||||||| |||| Sbjct: 1148 attgcatcaatctcatcaatgaaaa 1124
>ref|XM_954509.1| Neurospora crassa OR74A hypothetical protein (NCU02420.1) partial mRNA Length = 2493 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 tcaatctcatcaataaaaatgatgc 550 ||||||||||||| ||||||||||| Sbjct: 2030 tcaatctcatcaacaaaaatgatgc 2006
>ref|XM_331195.1| Neurospora crassa OR74A hypothetical protein (NCU02420.1) partial mRNA Length = 2493 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 526 tcaatctcatcaataaaaatgatgc 550 ||||||||||||| ||||||||||| Sbjct: 2030 tcaatctcatcaacaaaaatgatgc 2006
>gb|AC102127.11| Mus musculus chromosome 1, clone RP23-202A19, complete sequence Length = 196674 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 436 ccatctagctgattcagcaactcca 460 ||||||||||||||||| ||||||| Sbjct: 59745 ccatctagctgattcagtaactcca 59721
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 atcaatctcatcaataaaaat 545 ||||||||||||||||||||| Sbjct: 2038125 atcaatctcatcaataaaaat 2038145
>ref|XM_823362.1| Trypanosoma brucei TREU927 proteasome regulatory ATPase subunit 2 (Tb11.02.1220) partial mRNA Length = 1314 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 ||||||||| || ||| | |||||||||||||| || || ||||||||| Sbjct: 948 aaatccatcgagttgagtgagcaactccaacatggtacgctgcacttct 900
>ref|XM_386992.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06816.1) partial mRNA Length = 2658 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatgcagggggc 557 ||||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 1520 ccaatggcatcaatctcgtcgataaagatgatgcaaggggc 1480
>gb|BC062817.1| Mus musculus cDNA clone IMAGE:1282081, partial cds Length = 493 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 catccctccgtagagcaagca 178 ||||||||||||||||||||| Sbjct: 187 catccctccgtagagcaagca 167
>ref|XM_807507.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508303.50) partial mRNA Length = 1020 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 526 tcaatctcatcaataaaaatgatgcaggg 554 |||||||| ||||||||||| |||||||| Sbjct: 572 tcaatctcgtcaataaaaataatgcaggg 544
>gb|BC046948.1| Xenopus laevis hypothetical protein MGC53343, mRNA (cDNA clone MGC:53343 IMAGE:5570999), complete cds Length = 3107 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 548 ||||||||||| | ||||| ||||| ||||||| |||||||| |||||||| Sbjct: 1071 tcactgtcaaacctttttgtgccaatagcatcaagttcatcaatgaaaatgat 1019 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 169 agagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatca 228 ||||||| ||| || |||||||| ||||| || || |||||| ||||||||||| || Sbjct: 1398 agagcaatcattccggcttccacgcaaactgctttgcactgtgcgccattgaaatcgtcg 1339 Query: 229 gttgaacgagccagctcctc 248 || ||||||| |||||||| Sbjct: 1338 gtacaacgagcaagctcctc 1319
>ref|XM_652237.1| Entamoeba histolytica HM-1:IMSS cell division cycle protein 48, putative (3.t00077) partial mRNA Length = 2385 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 atcaatctcatcaataaaaat 545 ||||||||||||||||||||| Sbjct: 885 atcaatctcatcaataaaaat 865
>ref|XM_720378.1| Plasmodium yoelii yoelii str. 17XNL cell division protein FtsH (PY05070) partial mRNA Length = 2604 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaaaa 544 ||||||||||| ||||||||||||| Sbjct: 803 attgcatcaatttcatcaataaaaa 779
>ref|XM_660385.1| Cryptosporidium hominis TU502 ATPases of the AAA+ class (Chro.40196) partial mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaat 545 |||||||||||||| ||||||| |||||| Sbjct: 233 ccaattgcatcaatttcatcaaaaaaaat 205
>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete sequence Length = 47909 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 436 ccatctagctgattcagcaactccaacat 464 ||||||| ||| ||||||||||||||||| Sbjct: 37371 ccatctaactggttcagcaactccaacat 37399
>ref|NM_010303.3| Mus musculus guanine nucleotide binding protein, alpha 13 (Gna13), mRNA Length = 6217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 catccctccgtagagcaagca 178 ||||||||||||||||||||| Sbjct: 5163 catccctccgtagagcaagca 5183
>gb|BC032937.1| Mus musculus, clone IMAGE:1379624, mRNA, partial cds Length = 1301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 catccctccgtagagcaagca 178 ||||||||||||||||||||| Sbjct: 247 catccctccgtagagcaagca 267
>emb|Y10461.1|XLTBP6 X.laevis TBP6 mRNA Length = 3496 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 496 tcactgtcaaaacgctttgttccaattgcatcaatctcatcaataaaaatgat 548 ||||||||||| | ||||| ||||| ||||||| |||||||| |||||||| Sbjct: 898 tcactgtcaaatctttttgtgccaatagcatcaagttcatcaatgaaaatgat 846
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaaaa 544 ||||| ||||||||||||||||||| Sbjct: 1839443 attgcgtcaatctcatcaataaaaa 1839419
>gb|BC085416.1| Danio rerio zgc:101696, mRNA (cDNA clone MGC:101696 IMAGE:7227634), complete cds Length = 2131 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tcaatctcatcaataaaaatg 546 ||||||||||||||||||||| Sbjct: 1092 tcaatctcatcaataaaaatg 1072
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 525 atcaatctcatcaataaaaatgatgcagggggc 557 ||||||||| || ||||||| |||||||||||| Sbjct: 4654801 atcaatctcgtcgataaaaacgatgcagggggc 4654833
>dbj|AB217916.1| Lycopersicon esculentum LeftsH6 mRNA for FtsH protease, complete cds Length = 2213 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 523 gcatcaatctcatcaataaaaatgatgca 551 |||||||| |||||||||||||| ||||| Sbjct: 1007 gcatcaatttcatcaataaaaattatgca 979
>gb|AC048352.18| Homo sapiens 12 BAC RP11-871F6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216792 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 517 ccaattgcatcaatctcatcaataaaaatgatg 549 ||||| |||||||| ||||||||||| |||||| Sbjct: 4171 ccaatggcatcaatttcatcaataaacatgatg 4203
>gb|AC108749.11| Homo sapiens 3 BAC RP11-288B15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170796 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 517 ccaattgcatcaatctcatcaataaaaatgatg 549 ||||| |||||||| ||||||||||| |||||| Sbjct: 113302 ccaatggcatcaatttcatcaataaacatgatg 113270
>gb|AF227500.1| Trypanosoma brucei proteasome regulatory ATPase subunit 2 (Rpt2) gene, complete cds Length = 1314 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttct 480 ||||||||| || ||| | |||||||||||||| || || ||||||||| Sbjct: 948 aaatccatcgagttgagtgagcaactccaacatggtacgctgcacttct 900
>gb|AE010209.1| Pyrococcus furiosus DSM 3638, section 84 of 173 of the complete genome Length = 12355 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 caattgcatcaatctcatcaataaa 542 ||||||||||||| ||||||||||| Sbjct: 4817 caattgcatcaatttcatcaataaa 4841
>dbj|AK164985.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130105C18 product:unclassifiable, full insert sequence Length = 3374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 catccctccgtagagcaagca 178 ||||||||||||||||||||| Sbjct: 2341 catccctccgtagagcaagca 2361
>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete sequence Length = 107886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 436 ccatctagctgattcagcaactccaacat 464 ||||||| ||| ||||||||||||||||| Sbjct: 8529 ccatctaactggttcagcaactccaacat 8557
>ref|NM_067790.2| Caenorhabditis elegans Y38F2AR.7 (Y38F2AR.7) mRNA, complete cds Length = 1307 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 attgcatcaatctcatcaataaaaatgat 548 ||||||||||| ||||||||| ||||||| Sbjct: 122 attgcatcaatttcatcaatataaatgat 94
>dbj|AK038290.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130093H20 product:unclassifiable, full insert sequence Length = 2489 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 catccctccgtagagcaagca 178 ||||||||||||||||||||| Sbjct: 2247 catccctccgtagagcaagca 2267
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 29383353 ctttgttccaacagcatcaatctcatcgataaa 29383385
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||| |||||| |||||||||||||| ||||| Sbjct: 72113 ctttgatccaatcgcatcaatctcatcgataaa 72145
>ref|NM_001007431.1| Danio rerio zgc:101696 (zgc:101696), mRNA Length = 2131 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tcaatctcatcaataaaaatg 546 ||||||||||||||||||||| Sbjct: 1092 tcaatctcatcaataaaaatg 1072
>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full insert sequence Length = 1599 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 994 ctttgttccaacagcatcaatctcatcgataaa 962
>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full insert sequence Length = 1597 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 995 ctttgttccaacagcatcaatctcatcgataaa 963
>gb|AC025715.3| Caenorhabditis elegans cosmid Y38F2AR, complete sequence Length = 97157 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 attgcatcaatctcatcaataaaaatgat 548 ||||||||||| ||||||||| ||||||| Sbjct: 10541 attgcatcaatttcatcaatataaatgat 10569
>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full insert sequence Length = 947 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 295 ctttgttccaacagcatcaatctcatcgataaa 263
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 46275 ctttgttccaacagcatcaatctcatcgataaa 46307
>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full insert sequence Length = 1615 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 ||||||||||| |||||||||||||| ||||| Sbjct: 994 ctttgttccaacagcatcaatctcatcgataaa 962
>gb|AY105318.1| Zea mays PCO073117 mRNA sequence Length = 866 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 510 ctttgttccaattgcatcaatctcatcaataaa 542 |||||| |||| |||||||||||||||||||| Sbjct: 111 ctttgtcccaacagcatcaatctcatcaataaa 79
>gb|AF125519.1|AF125519 Brachymystax lenok mitochondrial control region, complete sequence Length = 1089 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cttctttgcttgcacttggat 119 ||||||||||||||||||||| Sbjct: 590 cttctttgcttgcacttggat 570
>dbj|AP003785.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-7N14, complete sequences Length = 164354 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ttcttctttgcttgcacttgg 117 ||||||||||||||||||||| Sbjct: 103621 ttcttctttgcttgcacttgg 103641
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 attgcatcaatctcatcaataaaaatgat 548 ||||||||||| ||||||||||| ||||| Sbjct: 1377243 attgcatcaatttcatcaataaatatgat 1377271 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 518 caattgcatcaatctcatcaataaaaat 545 |||| |||||||| |||||||||||||| Sbjct: 1590088 caatagcatcaatttcatcaataaaaat 1590061
>emb|CT033586.1| Platynereis dumerilii EST IB0AAA17DA06EM1 Length = 885 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 857 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 801
>emb|CT033585.1| Platynereis dumerilii EST IB0AAA17DA06FM1 Length = 820 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 555 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 611
>emb|CT033497.1| Platynereis dumerilii EST IB0AAA19BC04FM1 Length = 808 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 569 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 625
>emb|CT033264.1| Platynereis dumerilii EST IB0AAA23DB12EM1 Length = 944 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Minus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 663 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 607
>emb|CT033263.1| Platynereis dumerilii EST IB0AAA23DB12FM1 Length = 852 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 432 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 488 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 558 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 614 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,144,693 Number of Sequences: 3902068 Number of extensions: 5144693 Number of successful extensions: 92992 Number of sequences better than 10.0: 374 Number of HSP's better than 10.0 without gapping: 374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91122 Number of HSP's gapped (non-prelim): 1844 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
