ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL34_TOBAC (P41098) 60S ribosomal protein L34 175 8e-44
2RL34_PEA (P40590) 60S ribosomal protein L34 174 2e-43
3RL34_ARATH (Q42351) 60S ribosomal protein L34 169 4e-42
4RL34A_SCHPO (O42846) 60S ribosomal protein L34-A 102 9e-22
5RL34B_SCHPO (Q9URT8) 60S ribosomal protein L34-B (60S ribosomal ... 99 6e-21
6RL34_AEDTR (Q9NB34) 60S ribosomal protein L34 97 3e-20
7RL34_AEDAL (P45842) 60S ribosomal protein L34 (L31) 97 3e-20
8RL34A_YEAST (P87262) 60S ribosomal protein L34-A 89 6e-18
9RL34B_YEAST (P40525) 60S ribosomal protein L34-B 89 8e-18
10RL34_BRARE (Q7ZWJ7) 60S ribosomal protein L34 84 3e-16
11RL34_HUMAN (P49207) 60S ribosomal protein L34 83 6e-16
12RL34_MOUSE (Q9D1R9) 60S ribosomal protein L34 82 7e-16
13RL34_ICTPU (Q90YT5) 60S ribosomal protein L34 81 2e-15
14RL34_ENCCU (Q8SSA2) 60S ribosomal protein L34 69 1e-11
15RL34_PIG (Q29223) 60S ribosomal protein L34 66 6e-11
16RL34_RAT (P11250) 60S ribosomal protein L34 65 2e-10
17RL34_METJA (P54053) 50S ribosomal protein L34e 60 5e-09
18RL34_METTH (O26137) 50S ribosomal protein L34e 57 3e-08
19RL34_METKA (Q8TZB2) 50S ribosomal protein L34e 54 4e-07
20RL34_PYRAE (Q8ZTJ2) 50S ribosomal protein L34e 54 4e-07
21RL34_AERPE (P58026) 50S ribosomal protein L34e 51 2e-06
22RL34_PYRKO (Q5JJF7) 50S ribosomal protein L34e 49 1e-05
23RL34_PYRAB (Q9UZJ7) 50S ribosomal protein L34e 49 1e-05
24RL34_PYRHO (O74006) 50S ribosomal protein L34e 48 2e-05
25RL34_PYRFU (Q8U2L3) 50S ribosomal protein L34e 46 6e-05
26RL34_SULSO (Q97ZQ6) 50S ribosomal protein L34e 33 0.40
27PMT4_YEAST (P46971) Dolichyl-phosphate-mannose--protein mannosyl... 30 3.3
28CRTC_DICDI (Q23858) Calreticulin precursor 30 5.7
29C1QA_RAT (P31720) Complement C1q subcomponent subunit A precursor 29 7.5
30KSGA_THET8 (Q5SM60) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 9.7

>RL34_TOBAC (P41098) 60S ribosomal protein L34|
          Length = 120

 Score =  175 bits (443), Expect = 8e-44
 Identities = 85/92 (92%), Positives = 88/92 (95%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           RLTYRKRHSYATKSNQ RVVKTPGG+L+YQ TKKRASGPKCPVTGK+IQGIPHLRPTEYK
Sbjct: 4   RLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYK 63

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
           RSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 64  RSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95



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>RL34_PEA (P40590) 60S ribosomal protein L34|
          Length = 120

 Score =  174 bits (440), Expect = 2e-43
 Identities = 85/92 (92%), Positives = 88/92 (95%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           RLTYR+RHSYATKSNQ RVVKTPGG+LVYQ TKKRASGPKCPVTGK+IQGIPHLRPTEYK
Sbjct: 4   RLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYK 63

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
           RSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 64  RSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95



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>RL34_ARATH (Q42351) 60S ribosomal protein L34|
          Length = 120

 Score =  169 bits (429), Expect = 4e-42
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           RL YR RHSYATKSNQ R+VKTPGG+LVYQ TKKRASGPKCPVTGK+IQGIPHLRP+EYK
Sbjct: 4   RLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYK 63

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
           RSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 64  RSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95



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>RL34A_SCHPO (O42846) 60S ribosomal protein L34-A|
          Length = 112

 Score =  102 bits (253), Expect = 9e-22
 Identities = 49/92 (53%), Positives = 68/92 (73%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           R+TYR+R +Y T+SN+TR++KTPG  + Y + KK  + P+C  TG  +QGIP LRP E+ 
Sbjct: 4   RVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF- 62

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
            +RLS N++TV R YGG LS  AV++RI+RAF
Sbjct: 63  -ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93



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>RL34B_SCHPO (Q9URT8) 60S ribosomal protein L34-B (60S ribosomal protein L34-2)|
          Length = 111

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 48/92 (52%), Positives = 67/92 (72%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           R+TYR+R +Y T+SN+TR++KTPG  + Y + KK  + P+C  TG  +QGIP LRP E+ 
Sbjct: 4   RVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF- 62

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
            +RLS N++ V R YGG LS  AV++RI+RAF
Sbjct: 63  -ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93



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>RL34_AEDTR (Q9NB34) 60S ribosomal protein L34|
          Length = 138

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 64/92 (69%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           RLT R+R SY TKSN+ RVV+TPGGRLVY Y KK+ + PKC    +K+ GI   RP+E  
Sbjct: 3   RLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE-- 60

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
           R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct: 61  RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92



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>RL34_AEDAL (P45842) 60S ribosomal protein L34 (L31)|
          Length = 129

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 64/92 (69%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           RLT R+R SY TKSN+ RVV+TPGGRLVY Y KK+ + PKC    +K+ GI   RP+E  
Sbjct: 3   RLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE-- 60

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
           R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct: 61  RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92



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>RL34A_YEAST (P87262) 60S ribosomal protein L34-A|
          Length = 121

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 46/92 (50%), Positives = 63/92 (68%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           R+T+R+R+ Y T+SN+ +VVKTPGG L  Q+ KK A+ PKC   G  +QGI  LRP +Y 
Sbjct: 4   RVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY- 62

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
            + +S+  +TV+R YGG      V+ERIIRAF
Sbjct: 63  -ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93



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>RL34B_YEAST (P40525) 60S ribosomal protein L34-B|
          Length = 121

 Score = 89.0 bits (219), Expect = 8e-18
 Identities = 45/92 (48%), Positives = 63/92 (68%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 364
           R+T+R+R+ Y T+SN+ +VVKTPGG L  Q+ KK A+ PKC   G  +QGI  LRP +Y 
Sbjct: 4   RVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY- 62

Query: 363 RSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
            + +S+  +TV+R YGG      V+ERI+RAF
Sbjct: 63  -ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93



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>RL34_BRARE (Q7ZWJ7) 60S ribosomal protein L34|
          Length = 116

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+R SY T SN+TR+ +TPG R+VY YTKK    PK  C +   +++GI  +RP  
Sbjct: 3   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVRPQV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 63  L--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94



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>RL34_HUMAN (P49207) 60S ribosomal protein L34|
          Length = 116

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+R SY T SN+TR+ +TPG R+VY YTKK    PK  C V   +++G+  +RP  
Sbjct: 3   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 63  L--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94



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>RL34_MOUSE (Q9D1R9) 60S ribosomal protein L34|
          Length = 116

 Score = 82.4 bits (202), Expect = 7e-16
 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+R SY T SN+TR+ +TPG R+VY YTKK    PK  C V   +++G+  +RP  
Sbjct: 3   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 63  L--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAF 94



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>RL34_ICTPU (Q90YT5) 60S ribosomal protein L34|
          Length = 116

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+  SY T SN+TR+ +TPG R+VY YTKK    PK  C +   +++GI  +RP  
Sbjct: 3   RLTYRRTVSYNTTSNKTRLSRTPGNRIVYLYTKKTGKAPKSACGICPGRLRGIRAVRPQV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V+R YGG +    VR+RI RAF
Sbjct: 63  L--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94



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>RL34_ENCCU (Q8SSA2) 60S ribosomal protein L34|
          Length = 110

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -2

Query: 528 KRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLS 349
           K  +Y T+SN+ R V+TP G+LV +  KK +   +C      +  I  +RP E+ R ++S
Sbjct: 8   KGATYKTRSNRRRKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAEFSRQKVS 67

Query: 348 RNRRTVNRPYGGVLSGPAVRERIIRAF 268
             R  VNRPYG    G  VRE+II AF
Sbjct: 68  ARR--VNRPYGATTCGRCVREKIISAF 92



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>RL34_PIG (Q29223) 60S ribosomal protein L34|
          Length = 116

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+R SY T SN+TR+ +TPG R+VY YTKK    PK  C V   +++G+  +RP  
Sbjct: 3   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V            VR+R  RAF
Sbjct: 63  L--MRLSKTKKHVQPGLWWFHVAKCVRDRXKRAF 94



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>RL34_RAT (P11250) 60S ribosomal protein L34|
          Length = 116

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = -2

Query: 543 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLRPTE 370
           RLTYR+R SY T SN+TR+ +TPG R+VY YTKK    PK  C V   +++G+  +RP  
Sbjct: 3   RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVLPGRLRGVVAVRPKV 62

Query: 369 YKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 268
               RLS+ ++ V +    +       +RI RAF
Sbjct: 63  L--MRLSKTKKHVQQGLWWLHVRQVCPDRIKRAF 94



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>RL34_METJA (P54053) 50S ribosomal protein L34e|
          Length = 89

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 27/81 (33%), Positives = 48/81 (59%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S +    +TPGGR+V  Y +++   PKC + G ++ G+P  RP E +  +L +++R
Sbjct: 6   YRSRSYRRIYRRTPGGRIVIHYKRRKPGKPKCAICGAELHGVPRGRPVEIR--KLPKSQR 63

Query: 336 TVNRPYGGVLSGPAVRERIIR 274
              RPYGG L    ++  +I+
Sbjct: 64  RPERPYGGYLCPRCLKRLMIQ 84



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>RL34_METTH (O26137) 50S ribosomal protein L34e|
          Length = 88

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 29/77 (37%), Positives = 43/77 (55%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S +    KTPGGR V  Y +K+ S   C   GK + G+P  RP  Y+  +LS++++
Sbjct: 6   YRSRSYKRIFKKTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRP--YEIRKLSKSKK 63

Query: 336 TVNRPYGGVLSGPAVRE 286
             NRPYGG       R+
Sbjct: 64  RPNRPYGGYYCSSCARK 80



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>RL34_METKA (Q8TZB2) 50S ribosomal protein L34e|
          Length = 113

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 28/79 (35%), Positives = 43/79 (54%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S +    +TPGGR V  + KK  + PKC   G+++ G+   R  E K +   + ++
Sbjct: 6   YRSRSCRRVYKRTPGGRTVIHFEKKIPNWPKCGACGRRLNGVMRGRNVELKNA--PKTQK 63

Query: 336 TVNRPYGGVLSGPAVRERI 280
             NRPYGGVL     R+ I
Sbjct: 64  RPNRPYGGVLCPECARKLI 82



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>RL34_PYRAE (Q8ZTJ2) 50S ribosomal protein L34e|
          Length = 84

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 31/74 (41%), Positives = 39/74 (52%)
 Frame = -2

Query: 525 RHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSR 346
           R +Y ++S +   VKTPGGR V  Y K+    PKCP+TG  I G+        K  R   
Sbjct: 3   RPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKCPITGLPIGGM------NKKVYRFGI 56

Query: 345 NRRTVNRPYGGVLS 304
             R  +RPYGGV S
Sbjct: 57  KIRAPSRPYGGVYS 70



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>RL34_AERPE (P58026) 50S ribosomal protein L34e|
          Length = 95

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 25/71 (35%), Positives = 37/71 (52%)
 Frame = -2

Query: 483 KTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 304
           +TPGG  V  Y +++    +C   G+ + G+P  RP   +  RLS+  +   RPYGGVL 
Sbjct: 22  RTPGGSTVVHYERRKPGPARCARCGRPLGGVPRGRPPRVR--RLSKTAKRPERPYGGVLC 79

Query: 303 GPAVRERIIRA 271
              + E I  A
Sbjct: 80  STCLAEMIFEA 90



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>RL34_PYRKO (Q5JJF7) 50S ribosomal protein L34e|
          Length = 90

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/82 (26%), Positives = 47/82 (57%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S + + V+TPGGR V  + +++     C + G+ + G+P  RP+E +  +L + ++
Sbjct: 5   YRSRSWRRKYVRTPGGRTVIHFERRKPKVAHCAMCGRPLNGVPRGRPSELR--KLPKTKK 62

Query: 336 TVNRPYGGVLSGPAVRERIIRA 271
              RPY  +   P+   ++++A
Sbjct: 63  RPERPYPNLC--PSCMRKVMKA 82



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>RL34_PYRAB (Q9UZJ7) 50S ribosomal protein L34e|
          Length = 91

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 39/66 (59%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S + + V+TPGGR+V  + +++     C + G+ + GIP  RP E +  +L + ++
Sbjct: 5   YRSRSWRRKYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMR--KLPKTKK 62

Query: 336 TVNRPY 319
              RPY
Sbjct: 63  RPERPY 68



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>RL34_PYRHO (O74006) 50S ribosomal protein L34e|
          Length = 91

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S + + V+TPGGR+V  + +K+     C + G+ + GIP  RP E ++   ++ R 
Sbjct: 5   YRSRSWRRKYVRTPGGRVVVHFERKKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKKRP 64

Query: 336 TVNRPY 319
               PY
Sbjct: 65  ERPMPY 70



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>RL34_PYRFU (Q8U2L3) 50S ribosomal protein L34e|
          Length = 89

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/65 (32%), Positives = 38/65 (58%)
 Frame = -2

Query: 516 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 337
           Y ++S + + V+TPGGR+V  + +K+     C + G+ + GIP  RP E +  +L + ++
Sbjct: 5   YRSRSWRRKYVRTPGGRVVIHFERKKPKIAHCAMCGRPLNGIPRGRPVEMR--KLPKTKK 62

Query: 336 TVNRP 322
              RP
Sbjct: 63  RPERP 67



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>RL34_SULSO (Q97ZQ6) 50S ribosomal protein L34e|
          Length = 88

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = -2

Query: 525 RHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSR 346
           R +  ++S +   VK P G+ V  Y +KR     C +  K + G+     T +   + S+
Sbjct: 3   RPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGV----KTNFLH-KYSK 57

Query: 345 NRRTVNRPYGGVLSGPAVRERI 280
           + +   RP+GG L    + + I
Sbjct: 58  SEKRPERPFGGYLCSSCLTQLI 79



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>PMT4_YEAST (P46971) Dolichyl-phosphate-mannose--protein mannosyltransferase 4|
           (EC 2.4.1.109)
          Length = 762

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 365 LYSVGLRCGIPWIFFPVTGHFGPLARFLVYWYTSLPPGVLTTRVWFDL 508
           ++ V + C + W F     +F PL    VY   SL P  + +R WFD+
Sbjct: 717 VFLVCVSCAVAWFFV----YFSPL----VYGDVSLSPSEVVSREWFDI 756



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>CRTC_DICDI (Q23858) Calreticulin precursor|
          Length = 424

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 442 AGEWAKMPGYREEDPRNSTPEAY*VQEVQIVKEPEDCKPS 323
           A +W  +P  + +DP+ S P  +   +V+ + +PED KP+
Sbjct: 197 ADDWELLPSKQIKDPKQSKPVDW--VDVKEIDDPEDVKPA 234



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>C1QA_RAT (P31720) Complement C1q subcomponent subunit A precursor|
          Length = 245

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 346 P*QSGPLVLSRPQVWNSLDLLPGNRAFWPTRPLFGVLVHKPPTWG 480
           P  +GPL  S PQ    +   PGN    P RP F  +   PPT+G
Sbjct: 85  PGPTGPLGNSGPQGLKGVKGNPGNIRDQP-RPAFSAIRQNPPTYG 128



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>KSGA_THET8 (Q5SM60) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 271

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 400 DLLPGNRAFWPTRPLFGVLVHKPPTWGLDDASLVRL 507
           DL PG  AF+P   ++  LV   PT  LDD  L RL
Sbjct: 178 DLPPG--AFFPPPKVWSSLVRLTPTGALDDPGLFRL 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,413,851
Number of Sequences: 219361
Number of extensions: 1398680
Number of successful extensions: 3783
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3767
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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