ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB109201.1| Oryza sativa (japonica cultivar-group) OsRFC5 mR... 577 e-161
2ref|XM_469953.1| Oryza sativa (japonica cultivar-group), mRNA 569 e-159
3dbj|AK103751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
4dbj|AK059559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
5gb|AY105201.1| Zea mays PCO093185 mRNA sequence 442 e-121
6gb|BT017250.1| Zea mays clone EL01N0307D02.c mRNA sequence 426 e-116
7gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 135 2e-28
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 2e-28
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
10gb|AY110675.1| Zea mays CL31457_1 mRNA sequence 105 2e-19
11gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bi... 96 2e-16
12gb|AY559232.1| Zea mays isolate mon00212 Ac insertion site 90 1e-14
13ref|XM_796686.1| PREDICTED: Strongylocentrotus purpuratus simila... 64 6e-07
14ref|XM_774819.1| PREDICTED: Strongylocentrotus purpuratus simila... 64 6e-07
15gb|BT014244.1| Lycopersicon esculentum clone 133445R, mRNA sequence 54 6e-04
16ref|NM_122656.3| Arabidopsis thaliana DNA binding / nucleoside-t... 46 0.15
17gb|AY091236.1| Arabidopsis thaliana putative replication factor ... 46 0.15
18gb|AY074381.1| Arabidopsis thaliana putative replication factor ... 46 0.15
19emb|BX832152.1|CNS0A1N0 Arabidopsis thaliana Full-length cDNA Co... 46 0.15
20emb|BX831280.1|CNS09YRN Arabidopsis thaliana Full-length cDNA Co... 46 0.15
21gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana... 46 0.15
22ref|XM_778423.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 44 0.59
23gb|AC122058.4| Mus musculus BAC clone RP24-468G7 from chromosome... 42 2.3
24ref|XM_722985.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 2.3
25emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chr... 42 2.3
26gb|AE014177.1| Mus musculus piebald deletion region section 5 of... 42 2.3
27gb|AC151910.4| Mus musculus BAC clone RP23-67A17 from 14, comple... 42 2.3
28emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chr... 42 2.3
29gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ... 40 9.2
30ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8... 40 9.2
31ref|NM_026342.1| Mus musculus RIKEN cDNA 1810073G14 gene (181007... 40 9.2
32gb|BC019518.1| Mus musculus RIKEN cDNA 1810073G14 gene, mRNA (cD... 40 9.2
33emb|Z74029.1|CEC45B11 Caenorhabditis elegans Cosmid C45B11, comp... 40 9.2
34ref|XM_663272.1| Cryptosporidium hominis TU502 Golgi reassembly ... 40 9.2
35emb|AL731576.9| Human DNA sequence from clone RP11-178G16 on chr... 40 9.2
36emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chr... 40 9.2
37emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 40 9.2
38emb|CR859371.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1729 (from cl... 40 9.2
39emb|BX936343.9| Zebrafish DNA sequence from clone CH211-51C14 in... 40 9.2
40emb|CR615605.1| full-length cDNA clone CS0DK011YL11 of HeLa cell... 40 9.2
41dbj|AK055524.1| Homo sapiens cDNA FLJ30962 fis, clone HCASM2000560 40 9.2
42emb|CR593339.1| full-length cDNA clone CS0DK005YF08 of HeLa cell... 40 9.2
43dbj|AK149763.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.2
44emb|CR406153.1| Gallus gallus finished cDNA, clone ChEST851b23 40 9.2
45ref|NM_073410.2| Caenorhabditis elegans C45B11.2 (C45B11.2) mRNA... 40 9.2
46dbj|AK076316.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 9.2
47dbj|AK018570.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 9.2
48dbj|AK007968.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 9.2
49gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, compl... 40 9.2
50gb|AC138956.3| Homo sapiens chromosome 5 clone RP11-843P14, comp... 40 9.2
51emb|BX950459.1| Gallus gallus finished cDNA, clone ChEST911a20 40 9.2
52gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, comple... 40 9.2
53ref|XM_220442.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 9.2
54emb|AL953899.7| Zebrafish DNA sequence from clone CH211-233N24, ... 40 9.2
55emb|BX005484.7| Zebrafish DNA sequence from clone DKEY-25G12, co... 40 9.2
56emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 i... 40 9.2
57gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromo... 40 9.2
58emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 ma... 40 9.2
59gb|BC002999.1| Homo sapiens BRCA1/BRCA2-containing complex, subu... 40 9.2
60gb|BC006540.2| Homo sapiens BRCA1/BRCA2-containing complex, subu... 40 9.2
61emb|AL928673.4| Mouse DNA sequence from clone RP23-139B13 on chr... 40 9.2
62emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2... 40 9.2
63ref|NM_001018055.1| Homo sapiens chromosome X open reading frame... 40 9.2
64ref|NM_024332.2| Homo sapiens chromosome X open reading frame 53... 40 9.2 
>dbj|AB109201.1| Oryza sativa (japonica cultivar-group) OsRFC5 mRNA for replication
            factor C 38 kDa subunit, complete cds
          Length = 1327

 Score =  577 bits (291), Expect = e-161
 Identities = 450/503 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  tccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggccttggac 227
            |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1137 tccttgtagatgctcatgaacttggcgacgaaagcttctaggtgaaaaatggccttggac 1078

                                                                        
Query: 228  ccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttcaaatca 287
            ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 1077 ccaagacgcatcttgtgttcatagtgtgcagcccagtgacaaatttcatgtttcaagtca 1018

                                                                        
Query: 288  gagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggtgggata 347
            |||||||| ||||||| |||||| |  ||||||||||| |||||||||||||||||||||
Sbjct: 1017 gagtctaatttcttcagtaactccgccaacaacttctttaagatgctttcaggtgggata 958

                                                                        
Query: 348  caattcacaagtaactcgtagaatttctggcgtacagaatatagccttttagggctttgt 407
            |||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||||||
Sbjct: 957  caattcacaagtaattcgtagaacttctggcgcacagcaaatagccttttagggctttgt 898

                                                                        
Query: 408  tcactcaagatttcagttgctatttcagacacatactgctcccagtcaagaggaggcgcc 467
            ||  ||| ||| |||| ||||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 897  tctttcatgatatcagctgctatttctgacacatattgctcccagtcaagaggaggtgct 838

                                                                        
Query: 468  acttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataatattgct 527
            |||||||||| || |||||| ||||||||||||||||| |||||||| || | ||| |||
Sbjct: 837  acttgatttgatgtaaatgggtattgctggactttgcaggtctcaaaaaacagtatcgct 778

                                                                        
Query: 528  cgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatggaagttgc 587
            || |||| ||| ||||| ||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 777  cgtctcaggttacggttcgattgtgctgctatcctagcagcaaatccaaatggaagctgc 718

                                                                        
Query: 588  agattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgtaggtgca 647
            ||||| ||||||||||||||||| ||||  ||||| || ||||| |||||  | ||||||
Sbjct: 717  agattttctttcttcccaatgaactccagaacttggacgatctggtcttcactgggtgca 658

                                   
Query: 648  ttcactcgcacattcaagcaacg 670
            |||||||||||||||||||||||
Sbjct: 657  ttcactcgcacattcaagcaacg 635
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>ref|XM_469953.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1326

 Score =  569 bits (287), Expect = e-159
 Identities = 449/503 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  tccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggccttggac 227
            |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1136 tccttgtagatgctcatgaacttggcgacgaaagcttctaggtgaaaaatggccttggac 1077

                                                                        
Query: 228  ccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttcaaatca 287
            ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 1076 ccaagacgcatcttgtgttcatagtgtgcagcccagtgacaaatttcatgtttcaagtca 1017

                                                                        
Query: 288  gagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggtgggata 347
            |||||||| ||||||| |||||| |  ||||||||||| |||||||||||||||||||||
Sbjct: 1016 gagtctaatttcttcagtaactccgccaacaacttctttaagatgctttcaggtgggata 957

                                                                        
Query: 348  caattcacaagtaactcgtagaatttctggcgtacagaatatagccttttagggctttgt 407
            |||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||||||
Sbjct: 956  caattcacaagtaattcgtagaacttctggcgcacagcaaatagccttttagggctttgt 897

                                                                        
Query: 408  tcactcaagatttcagttgctatttcagacacatactgctcccagtcaagaggaggcgcc 467
            ||  ||| ||| |||| ||||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 896  tctttcatgatatcagctgctatttctgacacatattgctcccagtcaagaggaggtgct 837

                                                                        
Query: 468  acttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataatattgct 527
            |||||||||| || |||||| ||||||||||||||||| |||||||| || | ||| |||
Sbjct: 836  acttgatttgatgtaaatgggtattgctggactttgcaggtctcaaaaaacagtatcgct 777

                                                                        
Query: 528  cgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatggaagttgc 587
            || |||| ||| ||||| ||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 776  cgtctcaggttacggttcgattgtgctgctatcctagcagcaaatccaaatggaagctgc 717

                                                                        
Query: 588  agattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgtaggtgca 647
            ||||| ||||||||||||||||| ||||  ||||| || ||||| |||||  | ||||||
Sbjct: 716  agattttctttcttcccaatgaactccagaacttggacgatctggtcttcactgggtgca 657

                                   
Query: 648  ttcactcgcacattcaagcaacg 670
            ||||||||||| |||||||||||
Sbjct: 656  ttcactcgcacgttcaagcaacg 634
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>dbj|AK103751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033142O15, full
            insert sequence
          Length = 1327

 Score =  569 bits (287), Expect = e-159
 Identities = 449/503 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  tccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggccttggac 227
            |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1137 tccttgtagatgctcatgaacttggcgacgaaagcttctaggtgaaaaatggccttggac 1078

                                                                        
Query: 228  ccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttcaaatca 287
            ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 1077 ccaagacgcatcttgtgttcatagtgtgcagcccagtgacaaatttcatgtttcaagtca 1018

                                                                        
Query: 288  gagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggtgggata 347
            |||||||| ||||||| |||||| |  ||||||||||| |||||||||||||||||||||
Sbjct: 1017 gagtctaatttcttcagtaactccgccaacaacttctttaagatgctttcaggtgggata 958

                                                                        
Query: 348  caattcacaagtaactcgtagaatttctggcgtacagaatatagccttttagggctttgt 407
            |||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||||||
Sbjct: 957  caattcacaagtaattcgtagaacttctggcgcacagcaaatagccttttagggctttgt 898

                                                                        
Query: 408  tcactcaagatttcagttgctatttcagacacatactgctcccagtcaagaggaggcgcc 467
            ||  ||| ||| |||| ||||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 897  tctttcatgatatcagctgctatttctgacacatattgctcccagtcaagaggaggtgct 838

                                                                        
Query: 468  acttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataatattgct 527
            |||||||||| || |||||| ||||||||||||||||| |||||||| || | ||| |||
Sbjct: 837  acttgatttgatgtaaatgggtattgctggactttgcaggtctcaaaaaacagtatcgct 778

                                                                        
Query: 528  cgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatggaagttgc 587
            || |||| ||| ||||| ||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 777  cgtctcaggttacggttcgattgtgctgctatcctagcagcaaatccaaatggaagctgc 718

                                                                        
Query: 588  agattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgtaggtgca 647
            ||||| ||||||||||||||||| ||||  ||||| || ||||| |||||  | ||||||
Sbjct: 717  agattttctttcttcccaatgaactccagaacttggacgatctggtcttcactgggtgca 658

                                   
Query: 648  ttcactcgcacattcaagcaacg 670
            ||||||||||| |||||||||||
Sbjct: 657  ttcactcgcacgttcaagcaacg 635
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>dbj|AK059559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G11, full
            insert sequence
          Length = 1257

 Score =  569 bits (287), Expect = e-159
 Identities = 449/503 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  tccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggccttggac 227
            |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1070 tccttgtagatgctcatgaacttggcgacgaaagcttctaggtgaaaaatggccttggac 1011

                                                                        
Query: 228  ccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttcaaatca 287
            ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 1010 ccaagacgcatcttgtgttcatagtgtgcagcccagtgacaaatttcatgtttcaagtca 951

                                                                        
Query: 288  gagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggtgggata 347
            |||||||| ||||||| |||||| |  ||||||||||| |||||||||||||||||||||
Sbjct: 950  gagtctaatttcttcagtaactccgccaacaacttctttaagatgctttcaggtgggata 891

                                                                        
Query: 348  caattcacaagtaactcgtagaatttctggcgtacagaatatagccttttagggctttgt 407
            |||||||||||||| |||||||| |||||||| |||| | ||||||||||||||||||||
Sbjct: 890  caattcacaagtaattcgtagaacttctggcgcacagcaaatagccttttagggctttgt 831

                                                                        
Query: 408  tcactcaagatttcagttgctatttcagacacatactgctcccagtcaagaggaggcgcc 467
            ||  ||| ||| |||| ||||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 830  tctttcatgatatcagctgctatttctgacacatattgctcccagtcaagaggaggtgct 771

                                                                        
Query: 468  acttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataatattgct 527
            |||||||||| || |||||| ||||||||||||||||| |||||||| || | ||| |||
Sbjct: 770  acttgatttgatgtaaatgggtattgctggactttgcaggtctcaaaaaacagtatcgct 711

                                                                        
Query: 528  cgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatggaagttgc 587
            || |||| ||| ||||| ||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 710  cgtctcaggttacggttcgattgtgctgctatcctagcagcaaatccaaatggaagctgc 651

                                                                        
Query: 588  agattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgtaggtgca 647
            ||||| ||||||||||||||||| ||||  ||||| || ||||| |||||  | ||||||
Sbjct: 650  agattttctttcttcccaatgaactccagaacttggacgatctggtcttcactgggtgca 591

                                   
Query: 648  ttcactcgcacattcaagcaacg 670
            ||||||||||| |||||||||||
Sbjct: 590  ttcactcgcacgttcaagcaacg 568
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>gb|AY105201.1| Zea mays PCO093185 mRNA sequence
          Length = 1261

 Score =  442 bits (223), Expect = e-121
 Identities = 439/511 (85%)
 Strand = Plus / Minus

                                                                       
Query: 162 aggaactccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggcc 221
           |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 716 aggaactccttgtaaacgctcatgaacttggccacgaaagcttctagatgaaaaatagcc 657

                                                                       
Query: 222 ttggacccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttc 281
           || || || || ||||||||||||||||| ||||| ||||||||||| |  ||||| |||
Sbjct: 656 tttgatccgaggcgcatcttgtgttcataatgtgcggcccagtgacagatctcatgtttc 597

                                                                       
Query: 282 aaatcagagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggt 341
           | ||| |  ||||||||| ||| ||| || |  |||||||||||||| ||  |||| |||
Sbjct: 596 agatccgcatctaacttcctcagtaattctgccaacaacttcttcaaaatagtttcgggt 537

                                                                       
Query: 342 gggatacaattcacaagtaactcgtagaatttctggcgtacagaatatagccttttaggg 401
           ||||||||||| || ||||| || ||||||||||||||||||| | ||||||||||||||
Sbjct: 536 gggatacaattgacgagtaattcatagaatttctggcgtacagcaaatagccttttaggg 477

                                                                       
Query: 402 ctttgttcactcaagatttcagttgctatttcagacacatactgctcccagtcaagagga 461
           ||||||||  | |  || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 476 ctttgttctgtaagtatatcagttgctatttcagacacatattgctcccagtcaagagga 417

                                                                       
Query: 462 ggcgccacttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataat 521
           |||||||||||||||| || |||||||||||| || |||||||| |||||||| || |  
Sbjct: 416 ggcgccacttgatttgatgtaaatggatattgttgcactttgcaagtctcaaaaaacaga 357

                                                                       
Query: 522 attgctcgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatgga 581
           ||||| ||||| |  || ||||||||||| || || || |||||||||||||||  ||||
Sbjct: 356 attgcccgcctaagattacggtttgattgtgcggcgatacgagcagcaaatccagctgga 297

                                                                       
Query: 582 agttgcagattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgta 641
           || |||||||| ||||||||||||||||| || |  ||||| ||||||||||||||  | 
Sbjct: 296 agatgcagattttctttcttcccaatgaactctagaacttggacaatctgatcttcgctg 237

                                          
Query: 642 ggtgcattcactcgcacattcaagcaacggg 672
           |||||||| ||||||||||| ||||||||||
Sbjct: 236 ggtgcatttactcgcacatttaagcaacggg 206
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>gb|BT017250.1| Zea mays clone EL01N0307D02.c mRNA sequence
          Length = 1558

 Score =  426 bits (215), Expect = e-116
 Identities = 437/511 (85%)
 Strand = Plus / Minus

                                                                        
Query: 162  aggaactccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggcc 221
            |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1226 aggaactccttgtaaacgctcatgaacttggccacgaaagcttctagatgaaaaatagcc 1167

                                                                        
Query: 222  ttggacccaagtcgcatcttgtgttcatagtgtgcagcccagtgacaaacttcatgcttc 281
            || || || || ||||||||||||||||| ||||| ||||||||||| |  ||||| |||
Sbjct: 1166 tttgatccgaggcgcatcttgtgttcataatgtgcggcccagtgacagatctcatgtttc 1107

                                                                        
Query: 282  aaatcagagtctaacttcttcattaactcggttaacaacttcttcaagatgctttcaggt 341
            | ||| |  ||||||||| ||| ||| || |  |||||||||||||| || ||||| |||
Sbjct: 1106 agatccgcatctaacttcctcagtaattctgccaacaacttcttcaaaatactttcgggt 1047

                                                                        
Query: 342  gggatacaattcacaagtaactcgtagaatttctggcgtacagaatatagccttttaggg 401
            ||||||||||| || ||||| || ||||||||||||||||||| | ||||||||||||||
Sbjct: 1046 gggatacaattgacgagtaattcatagaatttctggcgtacagcaaatagccttttaggg 987

                                                                        
Query: 402  ctttgttcactcaagatttcagttgctatttcagacacatactgctcccagtcaagagga 461
            ||||||||  | |  || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 986  ctttgttctgtaagtatatcagttgctatttcagacacatattgctcccagtcaagagga 927

                                                                        
Query: 462  ggcgccacttgatttgctgaaaatggatattgctggactttgcatgtctcaaagaataat 521
            |||||||||||||||| || |||||||||||| || ||||   | |||||||| || |  
Sbjct: 926  ggcgccacttgatttgatgtaaatggatattgttgcacttgcaaagtctcaaaaaacaga 867

                                                                        
Query: 522  attgctcgcctcaagttgcggtttgattgagctgctatccgagcagcaaatccaaatgga 581
            ||||| ||||| |  || ||||||||||| || || || |||||||||||||||  ||||
Sbjct: 866  attgcccgcctaagattacggtttgattgtgcggcgatacgagcagcaaatccagctgga 807

                                                                        
Query: 582  agttgcagattctctttcttcccaatgaattccaatacttgtacaatctgatcttctgta 641
            || |||||||| ||||||||||||||||| || |  ||||| ||||||||||||||  | 
Sbjct: 806  agatgcagattttctttcttcccaatgaactctagaacttggacaatctgatcttcgctg 747

                                           
Query: 642  ggtgcattcactcgcacattcaagcaacggg 672
            |||||||| ||||||||||| ||||||||||
Sbjct: 746  ggtgcatttactcgcacatttaagcaacggg 716
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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                         
Query: 492   tgctggactttgcatgtctcaaagaataatattgctcgcctcaagttgcggtttgattga 551
             |||||||||||||| |||||||| || | ||| ||||| |||| ||| ||||| ||||| 
Sbjct: 81912 tgctggactttgcaggtctcaaaaaacagtatcgctcgtctcaggttacggttcgattgt 81853

                                                                         
Query: 552   gctgctatccgagcagcaaatccaaatggaagttgcagattctctttcttcccaatgaat 611
             |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 81852 gctgctatcctagcagcaaatccaaatggaagctgcagattttctttcttcccaatgaac 81793

                 
Query: 612   tcca 615
             ||||
Sbjct: 81792 tcca 81789



 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                         
Query: 392   ccttttagggctttgttcactcaagatttcagttgctatttcagacacatactgctccca 451
             ||||||||||||||||||  ||| ||| |||| ||||||||| |||||||| ||||||||
Sbjct: 82130 ccttttagggctttgttctttcatgatatcagctgctatttctgacacatattgctccca 82071

                                                 
Query: 452   gtcaagaggaggcgccacttgatttgctgaaaatgg 487
             |||||||||||| || |||||||||| || ||||||
Sbjct: 82070 gtcaagaggaggtgctacttgatttgatgtaaatgg 82035



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                         
Query: 327   aagatgctttcaggtgggatacaattcacaagtaactcgtagaatttctggcgtacagaa 386
             ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |
Sbjct: 82368 aagatgctttcaggtgggatacaattcacaagtaattcgtagaacttctggcgcacagca 82309

                     
Query: 387   tatagcct 394
              |||||||
Sbjct: 82308 aatagcct 82301



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                         
Query: 247   catagtgtgcagcccagtgacaaacttcatgcttcaaatcagagtctaacttcttcatta 306
             |||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||
Sbjct: 82532 catagtgtgcagcccagtgacaaatttcatgtttcaagtcagagtctaatttcttcagta 82473

                               
Query: 307   actcggttaacaacttct 324
             |||| |  ||||||||||
Sbjct: 82472 actccgccaacaacttct 82455



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 210   tgaaaaatggccttggacccaagtcgcatcttgtgttc 247
             ||||||||||||||||||||||| ||||||||||||||
Sbjct: 82809 tgaaaaatggccttggacccaagacgcatcttgtgttc 82772



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 168   tccttgtaaatgctcatgaacttggccacgaaagct 203
             |||||||| ||||||||||||||||| |||||||||
Sbjct: 82961 tccttgtagatgctcatgaacttggcgacgaaagct 82926



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 642   ggtgcattcactcgcacattcaagcaacg 670
             ||||||||||||||||| |||||||||||
Sbjct: 81364 ggtgcattcactcgcacgttcaagcaacg 81336
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/124 (88%)
 Strand = Plus / Plus

                                                                            
Query: 492      tgctggactttgcatgtctcaaagaataatattgctcgcctcaagttgcggtttgattga 551
                |||||||||||||| |||||||| || | ||| ||||| |||| ||| ||||| ||||| 
Sbjct: 32661995 tgctggactttgcaggtctcaaaaaacagtatcgctcgtctcaggttacggttcgattgt 32662054

                                                                            
Query: 552      gctgctatccgagcagcaaatccaaatggaagttgcagattctctttcttcccaatgaat 611
                |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 32662055 gctgctatcctagcagcaaatccaaatggaagctgcagattttctttcttcccaatgaac 32662114

                    
Query: 612      tcca 615
                ||||
Sbjct: 32662115 tcca 32662118



 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                            
Query: 392      ccttttagggctttgttcactcaagatttcagttgctatttcagacacatactgctccca 451
                ||||||||||||||||||  ||| ||| |||| ||||||||| |||||||| ||||||||
Sbjct: 32661777 ccttttagggctttgttctttcatgatatcagctgctatttctgacacatattgctccca 32661836

                                                    
Query: 452      gtcaagaggaggcgccacttgatttgctgaaaatgg 487
                |||||||||||| || |||||||||| || ||||||
Sbjct: 32661837 gtcaagaggaggtgctacttgatttgatgtaaatgg 32661872



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                            
Query: 327      aagatgctttcaggtgggatacaattcacaagtaactcgtagaatttctggcgtacagaa 386
                ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |
Sbjct: 32661539 aagatgctttcaggtgggatacaattcacaagtaattcgtagaacttctggcgcacagca 32661598

                        
Query: 387      tatagcct 394
                 |||||||
Sbjct: 32661599 aatagcct 32661606



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                            
Query: 247      catagtgtgcagcccagtgacaaacttcatgcttcaaatcagagtctaacttcttcatta 306
                |||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||
Sbjct: 32661375 catagtgtgcagcccagtgacaaatttcatgtttcaagtcagagtctaatttcttcagta 32661434

                                  
Query: 307      actcggttaacaacttct 324
                |||| |  ||||||||||
Sbjct: 32661435 actccgccaacaacttct 32661452



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 210      tgaaaaatggccttggacccaagtcgcatcttgtgttc 247
                ||||||||||||||||||||||| ||||||||||||||
Sbjct: 32661098 tgaaaaatggccttggacccaagacgcatcttgtgttc 32661135



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 168      tccttgtaaatgctcatgaacttggccacgaaagct 203
                |||||||| ||||||||||||||||| |||||||||
Sbjct: 32660946 tccttgtagatgctcatgaacttggcgacgaaagct 32660981



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 642      ggtgcattcactcgcacattcaagcaacg 670
                ||||||||||||||||| |||||||||||
Sbjct: 32662543 ggtgcattcactcgcacgttcaagcaacg 32662571
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 2e-28
 Identities = 110/124 (88%)
 Strand = Plus / Plus

                                                                            
Query: 492      tgctggactttgcatgtctcaaagaataatattgctcgcctcaagttgcggtttgattga 551
                |||||||||||||| |||||||| || | ||| ||||| |||| ||| ||||| ||||| 
Sbjct: 32752505 tgctggactttgcaggtctcaaaaaacagtatcgctcgtctcaggttacggttcgattgt 32752564

                                                                            
Query: 552      gctgctatccgagcagcaaatccaaatggaagttgcagattctctttcttcccaatgaat 611
                |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 32752565 gctgctatcctagcagcaaatccaaatggaagctgcagattttctttcttcccaatgaac 32752624

                    
Query: 612      tcca 615
                ||||
Sbjct: 32752625 tcca 32752628



 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                            
Query: 392      ccttttagggctttgttcactcaagatttcagttgctatttcagacacatactgctccca 451
                ||||||||||||||||||  ||| ||| |||| ||||||||| |||||||| ||||||||
Sbjct: 32752287 ccttttagggctttgttctttcatgatatcagctgctatttctgacacatattgctccca 32752346

                                                    
Query: 452      gtcaagaggaggcgccacttgatttgctgaaaatgg 487
                |||||||||||| || |||||||||| || ||||||
Sbjct: 32752347 gtcaagaggaggtgctacttgatttgatgtaaatgg 32752382



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                            
Query: 327      aagatgctttcaggtgggatacaattcacaagtaactcgtagaatttctggcgtacagaa 386
                ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |
Sbjct: 32752049 aagatgctttcaggtgggatacaattcacaagtaattcgtagaacttctggcgcacagca 32752108

                        
Query: 387      tatagcct 394
                 |||||||
Sbjct: 32752109 aatagcct 32752116



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                            
Query: 247      catagtgtgcagcccagtgacaaacttcatgcttcaaatcagagtctaacttcttcatta 306
                |||||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||
Sbjct: 32751885 catagtgtgcagcccagtgacaaatttcatgtttcaagtcagagtctaatttcttcagta 32751944

                                  
Query: 307      actcggttaacaacttct 324
                |||| |  ||||||||||
Sbjct: 32751945 actccgccaacaacttct 32751962



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 210      tgaaaaatggccttggacccaagtcgcatcttgtgttc 247
                ||||||||||||||||||||||| ||||||||||||||
Sbjct: 32751608 tgaaaaatggccttggacccaagacgcatcttgtgttc 32751645



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 168      tccttgtaaatgctcatgaacttggccacgaaagct 203
                |||||||| ||||||||||||||||| |||||||||
Sbjct: 32751456 tccttgtagatgctcatgaacttggcgacgaaagct 32751491



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 642      ggtgcattcactcgcacattcaagcaacg 670
                ||||||||||||||||| |||||||||||
Sbjct: 32753053 ggtgcattcactcgcacgttcaagcaacg 32753081
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>gb|AY110675.1| Zea mays CL31457_1 mRNA sequence
          Length = 880

 Score =  105 bits (53), Expect = 2e-19
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 540 cggtttgattgagctgctatccgagcagcaaatccaaatggaagttgcagattctctttc 599
           ||||||||||| ||||| || |||||||||||||||  ||||||   ||| || ||||||
Sbjct: 806 cggtttgattgtgctgcgatacgagcagcaaatccagctggaagaatcaggttttctttc 747

                                                                       
Query: 600 ttcccaatgaattccaatacttgtacaatctgatcttctgtaggtgcattcactcgcaca 659
           |||||||||||||| |  ||||| ||||||||||||||  | ||||| || |||||||||
Sbjct: 746 ttcccaatgaattctagaacttggacaatctgatcttcactgggtgcgtttactcgcaca 687

                        
Query: 660 ttcaagcaacggg 672
           || ||||||||||
Sbjct: 686 tttaagcaacggg 674
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>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete
             sequence
          Length = 50000

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 392   ccttttagggctttgttcactcaagatttcagttgctatttcagacacatactgctccca 451
             ||||||||||||||||||  |||  || || || |||||||||||||| || ||||||||
Sbjct: 40057 ccttttagggctttgttctgtcagtatatccgtggctatttcagacacgtattgctccca 39998

                                                 
Query: 452   gtcaagaggaggcgccacttgatttgctgaaaatgg 487
              ||||||||||||||||||||||||| || ||||||
Sbjct: 39997 atcaagaggaggcgccacttgatttgatgtaaatgg 39962



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 135   ggttttcctcaaccaaatgcagcacaaaggaactccttgtaaatgctcatgaacttggcc 194
             |||||| |||||||||||| |||    |||||||||||||||||||||||||||||||||
Sbjct: 41551 ggttttgctcaaccaaatgtagccaccaggaactccttgtaaatgctcatgaacttggcc 41492

                      
Query: 195   acgaaagct 203
             |||||||||
Sbjct: 41491 acgaaagct 41483



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                         
Query: 498   actttgcatgtctcaaagaataatattgctcgcctcaagttgcggtttgattgagctgct 557
             |||||||| |||||||| || | ||| || || ||||  || ||||||||||| ||||| 
Sbjct: 39830 actttgcaagtctcaaaaaacagtatagcacgtctcagattacggtttgattgtgctgcg 39771

                                                                         
Query: 558   atccgagcagcaaatccaaatggaagttgcagattctctttcttcccaatgaattccaat 617
             || |||||||||||||||  ||||||   ||| || |||||||||||||||||||| |  
Sbjct: 39770 atacgagcagcaaatccagctggaagaatcaggttttctttcttcccaatgaattctaga 39711

                           
Query: 618   acttgtacaatctg 631
             ||||| ||||||||
Sbjct: 39710 acttggacaatctg 39697



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 323   cttcaagatgctttcaggtgggatacaattcacaagtaactcgtagaatttctggcgtac 382
             |||||| || ||||| |||||||||||||| || ||||| || |||||||||||||||||
Sbjct: 40909 cttcaaaatactttcgggtgggatacaattgacgagtaattcatagaatttctggcgtac 40850

              
Query: 383   a 383
             |
Sbjct: 40849 a 40849



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 202   cttccagatgaaaaatggccttggacccaagtcgcatcttgtg 244
             |||||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 41288 cttccagatgaaaaatagcctttgatccaaggcgcatcttgtg 41246



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 629   ctgatcttctgtaggtgcattcactcgcacattcaagcaacggg 672
             |||||||||  | ||||| || ||||||||||| ||||||||||
Sbjct: 39173 ctgatcttcactgggtgcgtttactcgcacatttaagcaacggg 39130
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>gb|AY559232.1| Zea mays isolate mon00212 Ac insertion site
          Length = 661

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 135 ggttttcctcaaccaaatgcagcacaaaggaactccttgtaaatgctcatgaacttggcc 194
           |||||| |||||||||||| |||    |||||||||||||||||||||||||||||||||
Sbjct: 166 ggttttgctcaaccaaatgtagccaccaggaactccttgtaaatgctcatgaacttggcc 225

                    
Query: 195 acgaaagct 203
           |||||||||
Sbjct: 226 acgaaagct 234



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 202 cttccagatgaaaaatggccttggacccaagtcgcatcttgtg 244
           |||||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 429 cttccagatgaaaaatagcctttgatccaaggcgcatcttgtg 471
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>ref|XM_796686.1| PREDICTED: Strongylocentrotus purpuratus similar to Activator 1 38
            kDa subunit (Replication factor C 38 kDa subunit) (A1 38
            kDa subunit) (RF-C 38 kDa subunit) (RFC38) (Replication
            factor C subunit 3), transcript variant 2 (LOC576419),
            mRNA
          Length = 1378

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 161  aaggaactccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggc 220
            |||||||  |||||| |||||||| |||||||| ||||| |||||||||||| | |||||
Sbjct: 1083 aaggaacctcttgtagatgctcataaacttggcaacgaatgcttccagatgatagatggc 1024

                
Query: 221  cttg 224
            ||||
Sbjct: 1023 cttg 1020
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>ref|XM_774819.1| PREDICTED: Strongylocentrotus purpuratus similar to Activator 1 38
            kDa subunit (Replication factor C 38 kDa subunit) (A1 38
            kDa subunit) (RF-C 38 kDa subunit) (RFC38) (Replication
            factor C subunit 3), transcript variant 1 (LOC576419),
            mRNA
          Length = 1394

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 161  aaggaactccttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggc 220
            |||||||  |||||| |||||||| |||||||| ||||| |||||||||||| | |||||
Sbjct: 1099 aaggaacctcttgtagatgctcataaacttggcaacgaatgcttccagatgatagatggc 1040

                
Query: 221  cttg 224
            ||||
Sbjct: 1039 cttg 1036
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>gb|BT014244.1| Lycopersicon esculentum clone 133445R, mRNA sequence
          Length = 1328

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 170  cttgtaaatgctcatgaacttggccacgaaagcttccagatgaaaaatggccttggaccc 229
            |||||| ||||||||||| |||||||| || ||||| |||||||| || |||||    ||
Sbjct: 1119 cttgtagatgctcatgaatttggccacaaatgcttcgagatgaaatatagccttctgtcc 1060

                                               
Query: 230  aagtcgcatcttgtgttcatagtgtgcagcccagt 264
            ||| |||||| | || ||||| || ||||||||||
Sbjct: 1059 aagacgcatcctatgctcataatgagcagcccagt 1025
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>ref|NM_122656.3| Arabidopsis thaliana DNA binding / nucleoside-triphosphatase/
           nucleotide binding AT5G27740 mRNA, complete cds
          Length = 1351

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 394 ttttagggctttgttcactcaagatttcagttgctatttcagacacatact 444
           ||||||||||||||||  |||  || ||||||||||||||||  |||||||
Sbjct: 905 ttttagggctttgttctttcatcatgtcagttgctatttcagcaacatact 855
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>gb|AY091236.1| Arabidopsis thaliana putative replication factor C (At5g27740)
           mRNA, complete cds
          Length = 1096

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 394 ttttagggctttgttcactcaagatttcagttgctatttcagacacatact 444
           ||||||||||||||||  |||  || ||||||||||||||||  |||||||
Sbjct: 814 ttttagggctttgttctttcatcatgtcagttgctatttcagcaacatact 764
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>gb|AY074381.1| Arabidopsis thaliana putative replication factor C (At5g27740)
           mRNA, complete cds
          Length = 1356

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 394 ttttagggctttgttcactcaagatttcagttgctatttcagacacatact 444
           ||||||||||||||||  |||  || ||||||||||||||||  |||||||
Sbjct: 905 ttttagggctttgttctttcatcatgtcagttgctatttcagcaacatact 855
to top
>emb|BX832152.1|CNS0A1N0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH55ZC02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1328

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 171  ttgtaaatgctcatgaacttggccacgaaagcttc 205
            ||||| |||||||||||||||||||| || |||||
Sbjct: 1114 ttgtatatgctcatgaacttggccacaaatgcttc 1080
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>emb|BX831280.1|CNS09YRN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS74ZF05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 394 ttttagggctttgttcactcaagatttcagttgctatttcagacacatact 444
           ||||||||||||||||  |||  || ||||||||||||||||  |||||||
Sbjct: 901 ttttagggctttgttctttcatcatgtcagttgctatttcagcaacatact 851
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>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome
             V, complete sequence
          Length = 93672

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 394   ttttagggctttgttcactcaagatttcagttgctatttcagacacatact 444
             ||||||||||||||||  |||  || ||||||||||||||||  |||||||
Sbjct: 46457 ttttagggctttgttctttcatcatgtcagttgctatttcagcaacatact 46407
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>ref|XM_778423.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC578239 (LOC578239), mRNA
          Length = 2328

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 265  gacaaacttcatgcttcaaatc 286
            ||||||||||||||||||||||
Sbjct: 2218 gacaaacttcatgcttcaaatc 2197
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>gb|AC122058.4| Mus musculus BAC clone RP24-468G7 from chromosome 14, complete sequence
          Length = 143331

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 580   gaagttgcagattctctttct 600
             |||||||||||||||||||||
Sbjct: 87456 gaagttgcagattctctttct 87436
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>ref|XM_722985.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07252)
           partial mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 404 ttgttcactcaagatttcagttgct 428
           |||||||||||| ||||||||||||
Sbjct: 765 ttgttcactcaatatttcagttgct 741
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>emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 134028

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 591    ttctctttcttcccaatgaat 611
              |||||||||||||||||||||
Sbjct: 115251 ttctctttcttcccaatgaat 115271
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>gb|AE014177.1| Mus musculus piebald deletion region section 5 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 580    gaagttgcagattctctttct 600
              |||||||||||||||||||||
Sbjct: 322618 gaagttgcagattctctttct 322598
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>gb|AC151910.4| Mus musculus BAC clone RP23-67A17 from 14, complete sequence
          Length = 207254

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 580   gaagttgcagattctctttct 600
             |||||||||||||||||||||
Sbjct: 22882 gaagttgcagattctctttct 22862
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>emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chromosome 1, complete
             sequence
          Length = 173053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   caagtcgcatcttgtgttcat 249
             |||||||||||||||||||||
Sbjct: 45291 caagtcgcatcttgtgttcat 45311
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>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence
          Length = 193057

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 475    ttgctgaaaatggatattgctggacttt 502
              ||||||||||||||||||| || |||||
Sbjct: 123865 ttgctgaaaatggatattggtgtacttt 123838
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>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X
          Length = 652898

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    cagcacaaaggaactccttg 173
              ||||||||||||||||||||
Sbjct: 287608 cagcacaaaggaactccttg 287589
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>ref|NM_026342.1| Mus musculus RIKEN cDNA 1810073G14 gene (1810073G14Rik), mRNA
          Length = 2553

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 577 ttcttcccaatgaattccaa 558
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>gb|BC019518.1| Mus musculus RIKEN cDNA 1810073G14 gene, mRNA (cDNA clone MGC:28706
           IMAGE:4456429), complete cds
          Length = 1768

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 582 ttcttcccaatgaattccaa 563
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>emb|Z74029.1|CEC45B11 Caenorhabditis elegans Cosmid C45B11, complete sequence
          Length = 15489

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  agatttcagttgctatttca 434
            ||||||||||||||||||||
Sbjct: 8705 agatttcagttgctatttca 8686
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>ref|XM_663272.1| Cryptosporidium hominis TU502 Golgi reassembly stacking protein 2,
           possibly N-myristoylated (53.7 kD) (4I879) (Chro.70047)
           partial mRNA
          Length = 2202

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 596 tttcttcccaatgaattccaatac 619
           ||||||||||||||| ||||||||
Sbjct: 469 tttcttcccaatgaactccaatac 446
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>emb|AL731576.9| Human DNA sequence from clone RP11-178G16 on chromosome 10 Contains the
             3' end of the VCL gene for vinculin, a novel gene, the
             AP3M1 gene for adaptor-related protein complex 3 mu 1
             subunit, the 5' end of the ADK gene for adenosine kinase
             and two CpG islands, complete sequence
          Length = 104656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aacacccacacatcagacca 65
             ||||||||||||||||||||
Sbjct: 33987 aacacccacacatcagacca 33968
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>emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chromosome X Contains the
             3' end of a novel gene (C6.1A) and a phosphatidylinositol
             binding clathrin assembly protein (PICALM) pseudogene,
             complete sequence
          Length = 74649

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   cagcacaaaggaactccttg 173
             ||||||||||||||||||||
Sbjct: 66917 cagcacaaaggaactccttg 66936
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    ttcttcccaatgaattccaa 616
              ||||||||||||||||||||
Sbjct: 157032 ttcttcccaatgaattccaa 157051
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>emb|CR859371.1| Pongo pygmaeus mRNA; cDNA DKFZp459H1729 (from clone DKFZp459H1729)
          Length = 2652

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2461 cagcacaaaggaactccttg 2442
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>emb|BX936343.9| Zebrafish DNA sequence from clone CH211-51C14 in linkage group 3,
             complete sequence
          Length = 160177

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 563   agcagcaaatccaaatggaa 582
             ||||||||||||||||||||
Sbjct: 72788 agcagcaaatccaaatggaa 72807
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>emb|CR615605.1| full-length cDNA clone CS0DK011YL11 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 2694

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2559 cagcacaaaggaactccttg 2540
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>dbj|AK055524.1| Homo sapiens cDNA FLJ30962 fis, clone HCASM2000560
          Length = 2643

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   aacacccacacatcagacca 65
            ||||||||||||||||||||
Sbjct: 1163 aacacccacacatcagacca 1182
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>emb|CR593339.1| full-length cDNA clone CS0DK005YF08 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 1477 cagcacaaaggaactccttg 1458
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>dbj|AK149763.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530015H09 product:hypothetical
           protein, full insert sequence
          Length = 2554

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 579 ttcttcccaatgaattccaa 560
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>emb|CR406153.1| Gallus gallus finished cDNA, clone ChEST851b23
          Length = 983

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 tcttgcagcagcaaacatcc 125
           ||||||||||||||||||||
Sbjct: 662 tcttgcagcagcaaacatcc 643
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>ref|NM_073410.2| Caenorhabditis elegans C45B11.2 (C45B11.2) mRNA, complete cds
          Length = 2073

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  agatttcagttgctatttca 434
            ||||||||||||||||||||
Sbjct: 1768 agatttcagttgctatttca 1749
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>dbj|AK076316.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732415O18 product:hypothetical protein,
           full insert sequence
          Length = 2553

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 575 ttcttcccaatgaattccaa 556
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>dbj|AK018570.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030624B09 product:hypothetical protein,
           full insert sequence
          Length = 2553

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 577 ttcttcccaatgaattccaa 558
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>dbj|AK007968.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810073G14 product:hypothetical
           protein, full insert sequence
          Length = 1748

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 578 ttcttcccaatgaattccaa 559
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>gb|AC139493.3| Homo sapiens chromosome 5 clone RP11-844P9, complete sequence
          Length = 173607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    cagcacaaaggaactccttg 173
              ||||||||||||||||||||
Sbjct: 158388 cagcacaaaggaactccttg 158369
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>gb|AC138956.3| Homo sapiens chromosome 5 clone RP11-843P14, complete sequence
          Length = 175357

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    cagcacaaaggaactccttg 173
              ||||||||||||||||||||
Sbjct: 114527 cagcacaaaggaactccttg 114546
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>emb|BX950459.1| Gallus gallus finished cDNA, clone ChEST911a20
          Length = 1851

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  tcttgcagcagcaaacatcc 125
            ||||||||||||||||||||
Sbjct: 1531 tcttgcagcagcaaacatcc 1512
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>gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, complete sequence
          Length = 199684

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    atacagaatgtaaacacccacaca 57
             ||||||||||||||||| ||||||
Sbjct: 77860 atacagaatgtaaacacacacaca 77883
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>ref|XM_220442.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 9030624B09
           (predicted) (LOC303155), mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 ttcttcccaatgaattccaa 616
           ||||||||||||||||||||
Sbjct: 601 ttcttcccaatgaattccaa 582
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>emb|AL953899.7| Zebrafish DNA sequence from clone CH211-233N24, complete sequence
          Length = 169796

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   tccgtatgctctggttttcc 142
             ||||||||||||||||||||
Sbjct: 78779 tccgtatgctctggttttcc 78798
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>emb|BX005484.7| Zebrafish DNA sequence from clone DKEY-25G12, complete sequence
          Length = 212049

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tccgtatgctctggttttcc 142
              ||||||||||||||||||||
Sbjct: 112912 tccgtatgctctggttttcc 112931
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>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18,
             complete sequence
          Length = 195621

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   gatttcagttgctatttcag 435
             ||||||||||||||||||||
Sbjct: 10813 gatttcagttgctatttcag 10794
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>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete
              sequence
          Length = 173847

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    cagcacaaaggaactccttg 173
              ||||||||||||||||||||
Sbjct: 105696 cagcacaaaggaactccttg 105677
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>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete
             sequence
          Length = 117521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   cagcacaaaggaactccttg 173
             ||||||||||||||||||||
Sbjct: 24076 cagcacaaaggaactccttg 24057
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>gb|BC002999.1| Homo sapiens BRCA1/BRCA2-containing complex, subunit 3, transcript
            variant 1, mRNA (cDNA clone MGC:3961 IMAGE:2821917),
            complete cds
          Length = 2846

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2650 cagcacaaaggaactccttg 2631
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>gb|BC006540.2| Homo sapiens BRCA1/BRCA2-containing complex, subunit 3, transcript
            variant 1, mRNA (cDNA clone MGC:2329 IMAGE:2821917),
            complete cds
          Length = 2846

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2650 cagcacaaaggaactccttg 2631
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>emb|AL928673.4| Mouse DNA sequence from clone RP23-139B13 on chromosome 4, complete
             sequence
          Length = 71090

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   acttcttcaagatgctttca 338
             ||||||||||||||||||||
Sbjct: 65763 acttcttcaagatgctttca 65744
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>emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2300N4 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 118332

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tacagaatgtaaacacccac 54
             ||||||||||||||||||||
Sbjct: 52560 tacagaatgtaaacacccac 52541
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>ref|NM_001018055.1| Homo sapiens chromosome X open reading frame 53 (CXorf53), transcript
            variant 2, mRNA
          Length = 2839

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2666 cagcacaaaggaactccttg 2647
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>ref|NM_024332.2| Homo sapiens chromosome X open reading frame 53 (CXorf53), transcript
            variant 1, mRNA
          Length = 2937

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cagcacaaaggaactccttg 173
            ||||||||||||||||||||
Sbjct: 2741 cagcacaaaggaactccttg 2722


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,406,441
Number of Sequences: 3902068
Number of extensions: 6406441
Number of successful extensions: 130223
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130019
Number of HSP's gapped (non-prelim): 198
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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