| Clone Name | rbags35m04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RL31_NICGU (P46290) 60S ribosomal protein L31 | 35 | 0.055 | 2 | RL312_ARATH (P51420) 60S ribosomal protein L31-2 | 33 | 0.16 | 3 | RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1 | 33 | 0.21 | 4 | RL31_PICMA (O65071) 60S ribosomal protein L31 | 33 | 0.21 | 5 | RL31_PERFR (Q9M573) 60S ribosomal protein L31 | 30 | 2.3 |
|---|
>RL31_NICGU (P46290) 60S ribosomal protein L31| Length = 120 Score = 35.0 bits (79), Expect = 0.055 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -3 Query: 183 VPQEGLKGLGTKVVEDED 130 +P +GLKGLGTK++EDED Sbjct: 103 IPAKGLKGLGTKIIEDED 120
>RL312_ARATH (P51420) 60S ribosomal protein L31-2| Length = 119 Score = 33.5 bits (75), Expect = 0.16 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -3 Query: 183 VPQEGLKGLGTKVVEDED 130 +P EGL GLGTKV+E+ED Sbjct: 102 IPAEGLSGLGTKVIEEED 119
>RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1| Length = 119 Score = 33.1 bits (74), Expect = 0.21 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -3 Query: 183 VPQEGLKGLGTKVVEDED 130 +P EGL GLGTK++E+ED Sbjct: 102 IPAEGLSGLGTKIIEEED 119
>RL31_PICMA (O65071) 60S ribosomal protein L31| Length = 120 Score = 33.1 bits (74), Expect = 0.21 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -3 Query: 183 VPQEGLKGLGTKVVEDED 130 VP EGL GLGTK++E+ED Sbjct: 103 VPPEGLTGLGTKIIEEED 120
>RL31_PERFR (Q9M573) 60S ribosomal protein L31| Length = 121 Score = 29.6 bits (65), Expect = 2.3 Identities = 10/18 (55%), Positives = 17/18 (94%) Frame = -3 Query: 183 VPQEGLKGLGTKVVEDED 130 +P+ GLKGLGT+V+++E+ Sbjct: 104 IPEGGLKGLGTQVIDEEE 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,618,561 Number of Sequences: 219361 Number of extensions: 365356 Number of successful extensions: 686 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 686 length of database: 80,573,946 effective HSP length: 37 effective length of database: 72,457,589 effective search space used: 1738982136 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)