ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 4e-08
2dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic D... 66 4e-08
3emb|AJ417520.1|OSA417520 Oryza sativa partial mRNA for ribosomal... 66 4e-08
4dbj|AK105284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 4e-08
5gb|BT017600.1| Zea mays clone EL01N0431G10.c mRNA sequence 52 6e-04
6gb|AF457941.1| Zea mays clone cho1c.pk002.n14, mRNA sequence 52 6e-04
7gb|AY109331.1| Zea mays CL253_2 mRNA sequence 52 6e-04
8ref|XM_467485.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
9gb|AY103830.2| Zea mays PCO109717 mRNA sequence 44 0.15
10gb|AC099062.2| Homo sapiens chromosome 1 clone RP5-1043L3, compl... 40 2.3
11gb|AC114486.2| Homo sapiens chromosome 1 clone RP11-371A23, comp... 40 2.3
12gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold 40 2.3
13gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, comple... 40 2.3
14gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosom... 40 2.3
15gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Canc... 40 2.3
16gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thali... 40 2.3
17emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chro... 40 2.3
18gb|AC113325.7| Mus musculus chromosome 1, clone RP23-453H23, com... 38 9.1
19gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 9.1
20gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 500... 38 9.1
21gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, com... 38 9.1
22gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, com... 38 9.1
23gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosom... 38 9.1
24gb|AC147784.3| Canis Familiaris, clone XX-25F3, complete sequence 38 9.1
25ref|XM_984929.1| PREDICTED: Mus musculus membrane-spanning 4-dom... 38 9.1
26ref|XM_355147.4| PREDICTED: Mus musculus membrane-spanning 4-dom... 38 9.1
27gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 m... 38 9.1
28emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in li... 38 9.1
29ref|XM_572961.1| Cryptococcus neoformans var. neoformans JEC21 s... 38 9.1
30emb|Z69884.1|CEF31F6 Caenorhabditis elegans Cosmid F31F6, comple... 38 9.1
31emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 i... 38 9.1
32emb|CR933817.15| Mouse DNA sequence from clone DN-246G6 on chrom... 38 9.1
33emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chr... 38 9.1
34emb|AL049825.18|HSJ662B22 Human DNA sequence from clone RP4-662B... 38 9.1
35emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on ch... 38 9.1
36ref|NM_137363.2| Drosophila melanogaster CG6550-RA (CG6550), mRNA 38 9.1
37gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, comple... 38 9.1
38gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54... 38 9.1
39gb|AY051634.1| Drosophila melanogaster GH28477 full length cDNA 38 9.1
40gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosom... 38 9.1
41gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, r... 38 9.1
42dbj|AK089722.1| Mus musculus activated spleen cDNA, RIKEN full-l... 38 9.1
43emb|AL110731.1|CNS018S4 Botrytis cinerea strain T4 cDNA library 38 9.1
44emb|AJ431185.1|ZMA431185 Zea mays prpl35-1 gene for putative pla... 38 9.1
45gb|AC091633.22| Homo sapiens 3 BAC RP11-506F8 (Roswell Park Canc... 38 9.1
46gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Can... 38 9.1
47gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome... 38 9.1
48emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in... 38 9.1
49gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47... 38 9.1
50dbj|D55682.1| Mus musculus DP1/TB2 gene, exon 38 9.1
51emb|AL953904.10| Zebrafish DNA sequence from clone CH211-266I6, ... 38 9.1
52gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, ... 38 9.1 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                         
Query: 26       atcatgaacagtagataacaataagctaaagcaagacttcccaacatgctctcagca 82
                ||||| ||||||||||||||| | ||||||||||||||||| ||  |||||||||||
Sbjct: 29814082 atcatcaacagtagataacaaaacgctaaagcaagacttccaaatttgctctcagca 29814138



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 125      gtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
                ||||| ||||||||||| ||||||||||| |||||||| || |||||
Sbjct: 29814197 gtttactcctcatcctcaacaaccttggttcccaaacccttgagacc 29814243
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>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2056_H01
          Length = 123428

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 26    atcatgaacagtagataacaataagctaaagcaagacttcccaacatgctctcagca 82
             ||||| ||||||||||||||| | ||||||||||||||||| ||  |||||||||||
Sbjct: 70427 atcatcaacagtagataacaaaacgctaaagcaagacttccaaatttgctctcagca 70483



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 125   gtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
             ||||| ||||||||||| ||||||||||| |||||||| || |||||
Sbjct: 70542 gtttactcctcatcctcaacaaccttggttcccaaacccttgagacc 70588
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>emb|AJ417520.1|OSA417520 Oryza sativa partial mRNA for ribosomal protein L31 (xd5 gene)
          Length = 325

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 26  atcatgaacagtagataacaataagctaaagcaagacttcccaacatgctctcagca 82
           ||||| ||||||||||||||| | ||||||||||||||||| ||  |||||||||||
Sbjct: 207 atcatcaacagtagataacaaaacgctaaagcaagacttccaaatttgctctcagca 151



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 125 gtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
           ||||| ||||||||||| ||||||||||| |||||||| || |||||
Sbjct: 92  gtttactcctcatcctcaacaaccttggttcccaaacccttgagacc 46
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>dbj|AK105284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-E05, full
            insert sequence
          Length = 2274

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 26   atcatgaacagtagataacaataagctaaagcaagacttcccaacatgctctcagca 82
            ||||| ||||||||||||||| | ||||||||||||||||| ||  |||||||||||
Sbjct: 1650 atcatcaacagtagataacaaaacgctaaagcaagacttccaaatttgctctcagca 1594



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 125  gtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
            ||||| ||||||||||| ||||||||||| |||||||| || |||||
Sbjct: 1535 gtttactcctcatcctcaacaaccttggttcccaaacccttgagacc 1489
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>gb|BT017600.1| Zea mays clone EL01N0431G10.c mRNA sequence
          Length = 533

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 137 tcctccacaaccttggtacccaaacc 162
           ||||||||||||||||||||||||||
Sbjct: 360 tcctccacaaccttggtacccaaacc 335
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>gb|AF457941.1| Zea mays clone cho1c.pk002.n14, mRNA sequence
          Length = 387

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 122 agggtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
           |||| ||| ||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 238 agggcttaatcctcatcctcaacaaccttagttcccaaacctttgagacc 189



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 34  cagtagataacaataagctaaagcaa 59
           ||||||||||||||||||| ||||||
Sbjct: 291 cagtagataacaataagctgaagcaa 266
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>gb|AY109331.1| Zea mays CL253_2 mRNA sequence
          Length = 2256

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 122 agggtttagtcctcatcctccacaaccttggtacccaaacctttaagacc 171
           |||| ||| ||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 212 agggcttaatcctcatcctcaacaaccttagttcccaaacctttgagacc 261



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 34  cagtagataacaataagctaaagcaa 59
           ||||||||||||||||||| ||||||
Sbjct: 159 cagtagataacaataagctcaagcaa 184
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>ref|XM_467485.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 372

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 131 tcctcatcctccacaaccttggtacccaaacctttaagacc 171
           ||||||||||| ||||||||||| |||||||| || |||||
Sbjct: 368 tcctcatcctcaacaaccttggttcccaaacccttgagacc 328
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>gb|AY103830.2| Zea mays PCO109717 mRNA sequence
          Length = 705

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 137 tcctccacaaccttggtaccca 158
           ||||||||||||||||||||||
Sbjct: 411 tcctccacaaccttggtaccca 390
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>gb|AC099062.2| Homo sapiens chromosome 1 clone RP5-1043L3, complete sequence
          Length = 101840

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 60   gacttcccaacatgctctcagcag 83
            |||||||||||||| |||||||||
Sbjct: 2525 gacttcccaacatggtctcagcag 2548
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>gb|AC114486.2| Homo sapiens chromosome 1 clone RP11-371A23, complete sequence
          Length = 179070

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     gttctaactgattgaaacaacaga 118
              ||||||||||||||| ||||||||
Sbjct: 168554 gttctaactgattgatacaacaga 168531
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>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold
          Length = 444202

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    ccaaacctttaagaccttcc 175
              ||||||||||||||||||||
Sbjct: 279933 ccaaacctttaagaccttcc 279952
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>gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, complete sequence
          Length = 98286

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    gacttcccaacatgctctcagcag 83
             |||||||||||||| |||||||||
Sbjct: 22959 gacttcccaacatggtctcagcag 22936
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>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete
             sequence
          Length = 181229

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aaagcaagacttcccaacatgctc 76
             |||||||||||||||| |||||||
Sbjct: 74384 aaagcaagacttcccagcatgctc 74407
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>gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 120070

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     taacaataagctaaagcaag 60
              ||||||||||||||||||||
Sbjct: 106677 taacaataagctaaagcaag 106658
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>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 36030

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   agatatgtattaagttctaactga 105
            |||||||| |||||||||||||||
Sbjct: 3812 agatatgttttaagttctaactga 3835
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>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
             sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    tcccaacatgctctcagcag 83
             ||||||||||||||||||||
Sbjct: 16921 tcccaacatgctctcagcag 16902
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>gb|AC113325.7| Mus musculus chromosome 1, clone RP23-453H23, complete sequence
          Length = 191225

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 156   ccaaacctttaagaccttc 174
             |||||||||||||||||||
Sbjct: 85259 ccaaacctttaagaccttc 85277
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
               sequence
          Length = 1178688

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 131     tcctcatcctccacaacct 149
               |||||||||||||||||||
Sbjct: 1103767 tcctcatcctccacaacct 1103785
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>gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 5002 (LBNL H102),
             complete sequence
          Length = 101615

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    tcccaacatgctctcagca 82
             |||||||||||||||||||
Sbjct: 86749 tcccaacatgctctcagca 86767
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>gb|AC099629.6| Mus musculus chromosome 15, clone RP24-86K17, complete sequence
          Length = 175809

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    agataacaataagctaaag 56
             |||||||||||||||||||
Sbjct: 68920 agataacaataagctaaag 68902
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>gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, complete sequence
          Length = 171422

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 42     aacaataagctaaagcaagactt 64
              |||||||| ||||||||||||||
Sbjct: 102924 aacaataacctaaagcaagactt 102946
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>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete sequence
          Length = 178560

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 131    tcctcatcctccacaacct 149
              |||||||||||||||||||
Sbjct: 109276 tcctcatcctccacaacct 109294
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>gb|AC147784.3| Canis Familiaris, clone XX-25F3, complete sequence
          Length = 176851

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 149    ttggtacccaaacctttaa 167
              |||||||||||||||||||
Sbjct: 142430 ttggtacccaaacctttaa 142448
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>ref|XM_984929.1| PREDICTED: Mus musculus membrane-spanning 4-domains, subfamily A,
           member 12 (LOC381213), mRNA
          Length = 825

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 131 tcctcatcctccacaacct 149
           |||||||||||||||||||
Sbjct: 108 tcctcatcctccacaacct 126
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>ref|XM_355147.4| PREDICTED: Mus musculus membrane-spanning 4-domains, subfamily A,
           member 12 (LOC381213), mRNA
          Length = 825

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 131 tcctcatcctccacaacct 149
           |||||||||||||||||||
Sbjct: 108 tcctcatcctccacaacct 126
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>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete
             sequence
          Length = 137003

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 81    cagatatgtattaagttctaact 103
             |||||||||||| ||||||||||
Sbjct: 91616 cagatatgtattgagttctaact 91594
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>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12, complete
              sequence
          Length = 218091

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     tgctctcagcagatatgta 90
              |||||||||||||||||||
Sbjct: 177830 tgctctcagcagatatgta 177812
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>ref|XM_572961.1| Cryptococcus neoformans var. neoformans JEC21 signal
           transduction-related protein (CNI04160) partial mRNA
          Length = 2971

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 131 tcctcatcctccacaacct 149
           |||||||||||||||||||
Sbjct: 422 tcctcatcctccacaacct 440
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>emb|Z69884.1|CEF31F6 Caenorhabditis elegans Cosmid F31F6, complete sequence
          Length = 36049

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    atgtattaagttctaactg 104
             |||||||||||||||||||
Sbjct: 25392 atgtattaagttctaactg 25410
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>emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 in linkage group 12,
            complete sequence
          Length = 156532

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   tgctctcagcagatatgta 90
            |||||||||||||||||||
Sbjct: 6675 tgctctcagcagatatgta 6693
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>emb|CR933817.15| Mouse DNA sequence from clone DN-246G6 on chromosome 11, complete
              sequence
          Length = 218726

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    gtacccaaacctttaagac 170
              |||||||||||||||||||
Sbjct: 152150 gtacccaaacctttaagac 152168
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>emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chromosome 13q22.1-31.1
             Contains the 3' end of the MCF2L gene for MCF.2 cell line
             derived transforming sequence-like, the F7 gene for
             coagulation factor VII (serum prothrombin conversion
             accelerator), the F10 gene for coagulation factor X, a
             lysyl-tRNA synthetase (KARS) pseudogene, the PROZ gene for
             protein Z, vitamin K-dependent plasma glycoprotein (PZ),
             the 3' end of a novel gene (FLJ11305) and six CpG islands,
             complete sequence
          Length = 132933

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 145   aaccttggtacccaaacct 163
             |||||||||||||||||||
Sbjct: 24636 aaccttggtacccaaacct 24654
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>emb|AL049825.18|HSJ662B22 Human DNA sequence from clone RP4-662B22 on chromosome 1p12-13.3
             Contains the 3' end of the NGFB gene for nerve growth
             factor (beta polypeptide) and the 5' end of a novel gene,
             complete sequence
          Length = 116521

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 77    tcagcagatatgtattaagttct 99
             |||||| ||||||||||||||||
Sbjct: 23806 tcagcaaatatgtattaagttct 23828
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>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the
              gene for a novel protein similar to ribosomal protein S8
              (Rps8) and a CpG island, complete sequence
          Length = 200125

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    gtacccaaacctttaagac 170
              |||||||||||||||||||
Sbjct: 174771 gtacccaaacctttaagac 174789
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>ref|NM_137363.2| Drosophila melanogaster CG6550-RA (CG6550), mRNA
          Length = 1757

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 53   aaagcaagacttcccaaca 71
            |||||||||||||||||||
Sbjct: 1686 aaagcaagacttcccaaca 1668
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>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence
          Length = 213167

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     tcccaacatgctctcagca 82
              |||||||||||||||||||
Sbjct: 174998 tcccaacatgctctcagca 174980
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>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone
              BACR28O12, complete sequence
          Length = 161244

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     aaagcaagacttcccaaca 71
              |||||||||||||||||||
Sbjct: 140224 aaagcaagacttcccaaca 140242
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>gb|AY051634.1| Drosophila melanogaster GH28477 full length cDNA
          Length = 1772

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 53   aaagcaagacttcccaaca 71
            |||||||||||||||||||
Sbjct: 1686 aaagcaagacttcccaaca 1668
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>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete sequence
          Length = 195224

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     ataagctaaagcaagactt 64
              |||||||||||||||||||
Sbjct: 158365 ataagctaaagcaagactt 158347
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>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone
             BACR21A09, complete sequence
          Length = 175506

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    aaagcaagacttcccaaca 71
             |||||||||||||||||||
Sbjct: 17225 aaagcaagacttcccaaca 17243
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>dbj|AK089722.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830010L24 product:unclassifiable, full
           insert sequence
          Length = 983

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 42  aacaataagctaaagcaagactt 64
           |||||||| ||||||||||||||
Sbjct: 912 aacaataacctaaagcaagactt 934
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>emb|AL110731.1|CNS018S4 Botrytis cinerea strain T4 cDNA library
          Length = 600

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 128 tagtcctcatcctccacaacctt 150
           ||||||||||||||| |||||||
Sbjct: 402 tagtcctcatcctcctcaacctt 380
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>emb|AJ431185.1|ZMA431185 Zea mays prpl35-1 gene for putative plastid ribosomal protein L35,
            exons 1-3, cultivar hybrid HD5xHD7
          Length = 5620

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 17   gtatggaacatcatgaaca 35
            |||||||||||||||||||
Sbjct: 4773 gtatggaacatcatgaaca 4755
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>gb|AC091633.22| Homo sapiens 3 BAC RP11-506F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153896

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     aagctaaagcaagacttcc 66
              |||||||||||||||||||
Sbjct: 105014 aagctaaagcaagacttcc 105032
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>gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171460

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    aagctaaagcaagacttcc 66
             |||||||||||||||||||
Sbjct: 53553 aagctaaagcaagacttcc 53571
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>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence
          Length = 172103

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    ataagctaaagcaagactt 64
             |||||||||||||||||||
Sbjct: 33076 ataagctaaagcaagactt 33058
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>emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in linkage group 20,
             complete sequence
          Length = 185926

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    taactgattgaaacaacag 117
             |||||||||||||||||||
Sbjct: 81790 taactgattgaaacaacag 81772
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>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete
              sequence
          Length = 290783

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     aaagcaagacttcccaaca 71
              |||||||||||||||||||
Sbjct: 160242 aaagcaagacttcccaaca 160260
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>dbj|D55682.1| Mus musculus DP1/TB2 gene, exon
          Length = 1298

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 90   attaagttctaactgattg 108
            |||||||||||||||||||
Sbjct: 1190 attaagttctaactgattg 1172
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>emb|AL953904.10| Zebrafish DNA sequence from clone CH211-266I6, complete sequence
          Length = 166088

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 134   tcatcctccacaaccttgg 152
             |||||||||||||||||||
Sbjct: 53665 tcatcctccacaaccttgg 53647
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>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
             sequence
          Length = 176773

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    attaagttctaactgattg 108
             |||||||||||||||||||
Sbjct: 67117 attaagttctaactgattg 67099


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,764,497
Number of Sequences: 3902068
Number of extensions: 1764497
Number of successful extensions: 123434
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123306
Number of HSP's gapped (non-prelim): 128
length of query: 185
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 163
effective length of database: 17,147,199,772
effective search space: 2794993562836
effective search space used: 2794993562836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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