ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35m02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY090539.1| Deschampsia antarctica clone Dacor-1.8 pyruvate kinase-like mRNA, 3' UTR and partial cds Length = 1730 Score = 517 bits (261), Expect = e-143 Identities = 429/479 (89%), Gaps = 12/479 (2%) Strand = Plus / Minus Query: 56 cgtaagtttcagaattgtaacgcggatcctatgatggcacca---taggaaaaac-agct 111 |||| ||||||||||||||| ||||||||| || || ||||| ||||| ||| |||| Sbjct: 1627 cgtaggtttcagaattgtaaggcggatcctgtgttgacaccaccataggagaaaggagct 1568 Query: 112 cgttttgcaaaactatagatagaattatacatagccaccaagcatcgttttggcctagtc 171 ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 1567 cgtttagcaaaactatagg----attatacatagccaccaagcaacgttttggcctagtc 1512 Query: 172 aaaaatctggcaagccc-tgagcaaaggctaattttgcctagtcgtccagctcaatgatc 230 ||||||||||||| ||| ||| ||| ||||| | |||||||||||||||||||||||| Sbjct: 1511 aaaaatctggcaaacccatgaccaa-ggctagta--gcctagtcgtccagctcaatgatc 1455 Query: 231 ttcacgacagaggaatctcccactttctggcacacaacaacacggtcatgcgatttgatc 290 ||||| || |||||||| ||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 1454 ttcacaaccgaggaatcccccaccttctggcagacgacaacacggtcgtgcgatttgatc 1395 Query: 291 acaccggatgctttgccatggtcaagagcaaccttcaacacagattcatttgtagtacta 350 |||||||| | |||||| |||||||||||||||||||| || || ||||||||||| ||| Sbjct: 1394 acaccggacgttttgccgtggtcaagagcaaccttcaaaactgactcatttgtagtgcta 1335 Query: 351 gtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcctctaactatgagt 410 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1334 gtagattcagcagggtgacgtggatcggcaagcatgggaaagaggcctctaactatgagt 1275 Query: 411 gattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacga 470 |||||||||||||| ||||| || |||||||||||||||| ||| |||||||| |||||| Sbjct: 1274 gattgtcttgcttcgaatgcacccgtgaagctccacttcagttggtttgttttcagacga 1215 Query: 471 ggaatgacaacagacaggacaggcatggtgggcctgtacttggcaattagccttgcagc 529 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1214 ggaatgacaacagacagaacaggcattgtgggcctgtacttggcaattagccttgcagc 1156
>dbj|AK061668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F07, full insert sequence Length = 1971 Score = 383 bits (193), Expect = e-103 Identities = 286/317 (90%) Strand = Plus / Minus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 1703 tcgtccagctcaatgatcttcacaaccgaggaatcacccactttctggcagacaacaacg 1644 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1643 cgatcatgcgacttgatcacaccggaagctttgccatggtcaagagcaaccttcaaaact 1584 Query: 333 gattcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaag 392 || ||||| |||| || || |||||||| || || || |||||||||||||| |||||| Sbjct: 1583 gactcattggtagcgctggtcgattcagctggatggcgaggatcagcaagcatcggaaag 1524 Query: 393 aggcctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaat 452 || |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| | Sbjct: 1523 agacctctaactatgagtgattgtcttgcttcaaatgcgccagtgaaactccacctcagt 1464 Query: 453 tgatttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttg 512 || |||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1463 tggtttgttttcagacgaggaatgacaacagatagaacaggcatggtgggcctgtacttg 1404 Query: 513 gcaattagccttgcagc 529 |||||||| |||||||| Sbjct: 1403 gcaattagtcttgcagc 1387 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 |||||||||| ||||||||||||||| |||| Sbjct: 1855 atcctatgattacaccataggaaaaactgctc 1824
>dbj|AK099650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F07, full insert sequence Length = 1933 Score = 375 bits (189), Expect = e-100 Identities = 285/317 (89%) Strand = Plus / Minus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 1703 tcgtccagctcaatgatcttctcaaccgaggaatcacccactttctggcagacaacaacg 1644 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1643 cgatcatgcgacttgatcacaccggaagctttgccatggtcaagagcaaccttcaaaact 1584 Query: 333 gattcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaag 392 || ||||| |||| || || |||||||| || || || |||||||||||||| |||||| Sbjct: 1583 gactcattggtagcgctggtcgattcagctggatggcgaggatcagcaagcatcggaaag 1524 Query: 393 aggcctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaat 452 || |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| | Sbjct: 1523 agacctctaactatgagtgattgtcttgcttcaaatgcgccagtgaaactccacctcagt 1464 Query: 453 tgatttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttg 512 || |||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1463 tggtttgttttcagacgaggaatgacaacagatagaacaggcatggtgggcctgtacttg 1404 Query: 513 gcaattagccttgcagc 529 |||||||| |||||||| Sbjct: 1403 gcaattagtcttgcagc 1387 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 |||||||||| ||||||||||||||| |||| Sbjct: 1855 atcctatgattacaccataggaaaaactgctc 1824 Score = 40.1 bits (20), Expect = 7.2 Identities = 40/44 (90%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 142 atagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 1794 atagccaagaagcatcgtttttggcctagtc-aaaatctggcaa 1752
>gb|AY106025.1| Zea mays PCO073639 mRNA sequence Length = 2170 Score = 363 bits (183), Expect = 4e-97 Identities = 282/315 (89%) Strand = Plus / Minus Query: 216 tccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacgg 275 |||||||||||||||||||| ||||||||||| |||||||||||||| || || || ||| Sbjct: 1870 tccagctcaatgatcttcaccacagaggaatcacccactttctggcaaacgacgacgcgg 1811 Query: 276 tcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacacagat 335 || || || |||||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 1810 tcgtgggacttgatcacgcccgaggctttgccatggtcaagagcaaccttcaacacagac 1751 Query: 336 tcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagagg 395 |||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || |||||| Sbjct: 1750 tcatttgtagcactggtagattcagctgggtgtcgtggatcagcaagcatagggaagagg 1691 Query: 396 cctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattga 455 |||||||||||||||||||||||||| ||||| | |||||||| |||||| ||| ||| Sbjct: 1690 cctctaactatgagtgattgtcttgcctcaaaaacacctgtgaaactccacctcagttgg 1631 Query: 456 tttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggca 515 ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 1630 tttgtctttagacgaggaatgacaacagacaaaacaggcatgctgggcctgtacttagca 1571 Query: 516 attagccttgcagct 530 || |||||||||||| Sbjct: 1570 atgagccttgcagct 1556 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 ||||||||||| ||||||||||||||| |||| Sbjct: 2011 atcctatgatgtcaccataggaaaaactgctc 1980
>dbj|AK071391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098A04, full insert sequence Length = 1967 Score = 351 bits (177), Expect = 1e-93 Identities = 282/317 (88%) Strand = Plus / Minus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 1768 tcgtccagctcaatgatcttcacaaccgaggaatctcccaccttctggcagacaacaacg 1709 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| || |||||||| || |||| || |||||||||||||||||||| || Sbjct: 1708 cgatcatgcgactttatcacaccagaaactttaccgtggtcaagagcaaccttcaaaacg 1649 Query: 333 gattcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaag 392 ||||||||||||| | || |||||||| || || | |||||||||||||| |||||| Sbjct: 1648 gattcatttgtagcgttggttgattcagctggatgcctcggatcagcaagcatcggaaag 1589 Query: 393 aggcctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaat 452 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||| | Sbjct: 1588 aggcctctaactatgagcgattgtcttgcttcaaatgcgccagtgaaactccacctcagt 1529 Query: 453 tgatttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttg 512 |||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||| Sbjct: 1528 tgatttgtttttagacgaggaatgacaacagatagaacaggcatggttggcctatacttg 1469 Query: 513 gcaattagccttgcagc 529 ||||||||||||||||| Sbjct: 1468 gcaattagccttgcagc 1452 Score = 48.1 bits (24), Expect = 0.029 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 130 atagaattatacatagccaccaagcatcg-ttttggcctagtcaaaaatctggcaa 184 |||| |||||||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct: 1869 ataggattatacatagccaagaagcaacgtttttggcctagtc-aaaatctggcaa 1815
>gb|AY103673.1| Zea mays PCO073638 mRNA sequence Length = 2092 Score = 289 bits (146), Expect = 5e-75 Identities = 278/322 (86%) Strand = Plus / Minus Query: 208 cctagtcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaa 267 |||||||||||||||||||||||||||| || || ||||||||||| |||||||| || | Sbjct: 1838 cctagtcgtccagctcaatgatcttcacaaccgatgaatctcccaccttctggcaaacga 1779 Query: 268 caacacggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttca 327 ||||||||||||| || ||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 1778 caacacggtcatgggacttgatcacaccacatgccttgccatggtctagagcaaccttca 1719 Query: 328 acacagattcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgg 387 || || ||||||||| |||| || ||||| || || || || ||||| |||||||| | Sbjct: 1718 gaactgactcatttgtattactggttgattcggctggatgccgaggatctgcaagcatcg 1659 Query: 388 gaaagaggcctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccact 447 ||||||||||||||||||| || || |||||||| ||||| || || ||||| ||||| Sbjct: 1658 gaaagaggcctctaactatcagcgactgtcttgcctcaaaagcaccagtgaaactccatc 1599 Query: 448 tcaattgatttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgt 507 ||| ||| ||||| || |||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1598 tcagttggtttgtcttcagacgaggaatgacaacagaaagaacaggcatggtgggcctgt 1539 Query: 508 acttggcaattagccttgcagc 529 ||||||| || ||||||||||| Sbjct: 1538 acttggcgatgagccttgcagc 1517 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 tcctatgatggcaccataggaaaaa 106 |||||||||||||||||||| |||| Sbjct: 1949 tcctatgatggcaccatagggaaaa 1925
>gb|BT018685.1| Zea mays clone EL01N0512A04.d mRNA sequence Length = 2017 Score = 281 bits (142), Expect = 1e-72 Identities = 277/322 (86%) Strand = Plus / Minus Query: 208 cctagtcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaa 267 |||||||||||||||||||||||||||| || || ||||||||||| |||||||| || | Sbjct: 1746 cctagtcgtccagctcaatgatcttcacaaccgatgaatctcccaccttctggcaaacga 1687 Query: 268 caacacggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttca 327 ||||||||||||| || ||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 1686 caacacggtcatgggacttgatcacaccacatgccttgccatggtctagagcaaccttca 1627 Query: 328 acacagattcatttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgg 387 || || ||||||||| |||| || ||||| || || || || ||||| |||||||| | Sbjct: 1626 gaactgactcatttgtattactggttgattcggctggatgccgaggatctgcaagcatcg 1567 Query: 388 gaaagaggcctctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccact 447 |||||||||||||||||| || || |||||||| ||||| || || ||||| ||||| Sbjct: 1566 aaaagaggcctctaactatcagcgactgtcttgcctcaaaagcaccagtgaaactccatc 1507 Query: 448 tcaattgatttgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgt 507 ||| ||| ||||| || |||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1506 tcagttggtttgtcttcagacgaggaatgacaacagaaagaacaggcatggtgggcctgt 1447 Query: 508 acttggcaattagccttgcagc 529 ||||||| || ||||||||||| Sbjct: 1446 acttggcgatgagccttgcagc 1425 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 tcctatgatggcaccataggaaaaa 106 |||||||||||||||||||| |||| Sbjct: 1858 tcctatgatggcaccatagggaaaa 1834
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 2222333 tcgtccagctcaatgatcttcacaaccgaggaatcacccactttctggcagacaacaacg 2222392 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 2222393 cgatcatgcgacttgatcacaccggaagctttgccatggtcaagagcaaccttcaaaact 2222452 Query: 333 gattcatttgtag 345 || ||||| |||| Sbjct: 2222453 gactcattggtag 2222465 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||| |||||||| |||||||||||||||| Sbjct: 2222964 cttcaaatgcgccagtgaaactccacctcagttggtttgttttcagacgaggaatgacaa 2223023 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattag 520 |||| || |||||||||||||||||||||||||||||||| Sbjct: 2223024 cagatagaacaggcatggtgggcctgtacttggcaattag 2223063 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2222787 ggatcagcaagcatcggaaagagacctctaactatgagtgattgtcttgc 2222836 Score = 40.1 bits (20), Expect = 7.2 Identities = 40/44 (90%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 142 atagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 2222242 atagccaagaagcatcgtttttggcctagtc-aaaatctggcaa 2222284 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 |||||||||| ||||||||||||||| |||| Sbjct: 2222181 atcctatgattacaccataggaaaaactgctc 2222212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 2230114 tcgtccagctcaatgatcttcacaaccgaggaatcacccactttctggcagacaacaacg 2230173 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 2230174 cgatcatgcgacttgatcacaccggaagctttgccatggtcaagagcaaccttcaaaact 2230233 Query: 333 gattcatttgtag 345 || ||||| |||| Sbjct: 2230234 gactcattggtag 2230246 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||| |||||||| |||||||||||||||| Sbjct: 2230745 cttcaaatgcgccagtgaaactccacctcagttggtttgttttcagacgaggaatgacaa 2230804 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattag 520 |||| || |||||||||||||||||||||||||||||||| Sbjct: 2230805 cagatagaacaggcatggtgggcctgtacttggcaattag 2230844 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2230568 ggatcagcaagcatcggaaagagacctctaactatgagtgattgtcttgc 2230617 Score = 40.1 bits (20), Expect = 7.2 Identities = 40/44 (90%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 142 atagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 2230023 atagccaagaagcatcgtttttggcctagtc-aaaatctggcaa 2230065 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 |||||||||| ||||||||||||||| |||| Sbjct: 2229962 atcctatgattacaccataggaaaaactgctc 2229993
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 119027 tcgtccagctcaatgatcttcacaaccgaggaatcacccactttctggcagacaacaacg 119086 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 119087 cgatcatgcgacttgatcacaccggaagctttgccatggtcaagagcaaccttcaaaact 119146 Query: 333 gattcatttgtag 345 || ||||| |||| Sbjct: 119147 gactcattggtag 119159 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||| |||||||| |||||||||||||||| Sbjct: 119658 cttcaaatgcgccagtgaaactccacctcagttggtttgttttcagacgaggaatgacaa 119717 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattag 520 |||| || |||||||||||||||||||||||||||||||| Sbjct: 119718 cagatagaacaggcatggtgggcctgtacttggcaattag 119757 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 119481 ggatcagcaagcatcggaaagagacctctaactatgagtgattgtcttgc 119530 Score = 40.1 bits (20), Expect = 7.2 Identities = 40/44 (90%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 142 atagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 118936 atagccaagaagcatcgtttttggcctagtc-aaaatctggcaa 118978 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 81 atcctatgatggcaccataggaaaaacagctc 112 |||||||||| ||||||||||||||| |||| Sbjct: 118875 atcctatgattacaccataggaaaaactgctc 118906
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 2244797 tcgtccagctcaatgatcttcacaaccgaggaatctcccaccttctggcagacaacaacg 2244856 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| || |||||||| || |||| || |||||||||||||||||||| || Sbjct: 2244857 cgatcatgcgactttatcacaccagaaactttaccgtggtcaagagcaaccttcaaaacg 2244916 Query: 333 gattcatttgtag 345 ||||||||||||| Sbjct: 2244917 gattcatttgtag 2244929 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2245528 cttcaaatgcgccagtgaaactccacctcagttgatttgtttttagacgaggaatgacaa 2245587 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattagcct 523 |||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 2245588 cagatagaacaggcatggttggcctatacttggcaattagcct 2245630 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2245347 ggatcagcaagcatcggaaagaggcctctaactatgagcgattgtcttgc 2245396 Score = 48.1 bits (24), Expect = 0.029 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 130 atagaattatacatagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 |||| |||||||||||||| ||||| |||||| ||||||||| |||||||||||| Sbjct: 2244696 ataggattatacatagccaagaagcaacgtttttggcctagtc-aaaatctggcaa 2244750
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 2244741 tcgtccagctcaatgatcttcacaaccgaggaatctcccaccttctggcagacaacaacg 2244800 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| || |||||||| || |||| || |||||||||||||||||||| || Sbjct: 2244801 cgatcatgcgactttatcacaccagaaactttaccgtggtcaagagcaaccttcaaaacg 2244860 Query: 333 gattcatttgtag 345 ||||||||||||| Sbjct: 2244861 gattcatttgtag 2244873 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2245472 cttcaaatgcgccagtgaaactccacctcagttgatttgtttttagacgaggaatgacaa 2245531 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattagcct 523 |||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 2245532 cagatagaacaggcatggttggcctatacttggcaattagcct 2245574 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2245291 ggatcagcaagcatcggaaagaggcctctaactatgagcgattgtcttgc 2245340 Score = 48.1 bits (24), Expect = 0.029 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 130 atagaattatacatagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 |||| |||||||||||||| ||||| |||||| ||||||||| |||||||||||| Sbjct: 2244640 ataggattatacatagccaagaagcaacgtttttggcctagtc-aaaatctggcaa 2244694
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 145 bits (73), Expect = 2e-31 Identities = 118/133 (88%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 127021 tcgtccagctcaatgatcttcacaaccgaggaatctcccaccttctggcagacaacaacg 127080 Query: 273 cggtcatgcgatttgatcacaccggatgctttgccatggtcaagagcaaccttcaacaca 332 || |||||||| || |||||||| || |||| || |||||||||||||||||||| || Sbjct: 127081 cgatcatgcgactttatcacaccagaaactttaccgtggtcaagagcaaccttcaaaacg 127140 Query: 333 gattcatttgtag 345 ||||||||||||| Sbjct: 127141 gattcatttgtag 127153 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 421 cttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaa 480 ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 127752 cttcaaatgcgccagtgaaactccacctcagttgatttgtttttagacgaggaatgacaa 127811 Query: 481 cagacaggacaggcatggtgggcctgtacttggcaattagcct 523 |||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 127812 cagatagaacaggcatggttggcctatacttggcaattagcct 127854 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 127571 ggatcagcaagcatcggaaagaggcctctaactatgagcgattgtcttgc 127620 Score = 48.1 bits (24), Expect = 0.029 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Plus Query: 130 atagaattatacatagccaccaagcatcgtttt-ggcctagtcaaaaatctggcaa 184 |||| |||||||||||||| ||||| |||||| ||||||||| |||||||||||| Sbjct: 126920 ataggattatacatagccaagaagcaacgtttttggcctagtc-aaaatctggcaa 126974
>gb|AF401281.1| Deschampsia antarctica putative pyruvate kinase mRNA, partial cds Length = 291 Score = 133 bits (67), Expect = 6e-28 Identities = 120/134 (89%), Gaps = 4/134 (2%) Strand = Plus / Minus Query: 130 atagaattatacatagccaccaagcatcgttttggcctagtcaaaaatctggcaagccc- 188 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 248 ataggattatacatagccaccaagcaacgttttggcctagtcaaaaatctggcaaaccca 189 Query: 189 tgagcaaaggctaattttgcctagtcgtccagctcaatgatcttcacgacagaggaatct 248 ||| | ||||||| | ||||||||||||||||||||||||||||| || || |||||| Sbjct: 188 tga-ccaaggcta--gtagcctagtcgtccagctcaatgatcttcacaaccgatgaatct 132 Query: 249 cccactttctggca 262 ||||| |||||||| Sbjct: 131 cccaccttctggca 118
>ref|NM_115159.2| Arabidopsis thaliana pyruvate kinase AT3G52990 mRNA, complete cds Length = 2014 Score = 111 bits (56), Expect = 2e-21 Identities = 241/300 (80%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 1740 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 1681 Query: 279 tgcgatttgatcacaccgg-atgctttgccatggtcaagagcaaccttcaacacagattc 337 ||||| ||||| || || | |||||| |||||||| ||||||||||||| || || || Sbjct: 1680 tgcgacttgattactccagcatgcttc-ccatggtctagagcaaccttcaggactgactc 1622 Query: 338 atttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcc 397 ||||| | ||| |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 1621 gtttgtcgcacttgtagattccgcagggtgacgagggtcagcaagcatagggaagaggcc 1562 Query: 398 tctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatt 457 ||| || || ||||| || || || ||||| || || | |||||||| |||| |||||| Sbjct: 1561 tctgacaataagtgactgcctcgcctcaaaagctccactaaagctccatttcagttgatt 1502 Query: 458 tgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggcaat 517 ||| || | || |||||||||||||| | || ||||| || |||||||| |||||||| Sbjct: 1501 tgtcttaacccggggaatgacaacagaaataaccggcatcgttggcctgtatttggcaat 1442
>gb|BT001019.1| Arabidopsis thaliana At3g52990/F8J2_160 mRNA, complete cds Length = 1584 Score = 111 bits (56), Expect = 2e-21 Identities = 241/300 (80%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 1574 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 1515 Query: 279 tgcgatttgatcacaccgg-atgctttgccatggtcaagagcaaccttcaacacagattc 337 ||||| ||||| || || | |||||| |||||||| ||||||||||||| || || || Sbjct: 1514 tgcgacttgattactccagcatgcttc-ccatggtctagagcaaccttcaggactgactc 1456 Query: 338 atttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcc 397 ||||| | ||| |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 1455 gtttgtcgcacttgtagattccgcagggtgacgagggtcagcaagcatagggaagaggcc 1396 Query: 398 tctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatt 457 ||| || || ||||| || || || ||||| || || | |||||||| |||| |||||| Sbjct: 1395 tctgacaataagtgactgcctcgcctcaaaagctccactaaagctccatttcagttgatt 1336 Query: 458 tgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggcaat 517 ||| || | || |||||||||||||| | || ||||| || |||||||| |||||||| Sbjct: 1335 tgtcttaacccggggaatgacaacagaaataaccggcatcgttggcctgtatttggcaat 1276
>gb|BT000735.1| Arabidopsis thaliana clone RAFL09-23-L13 (R18372) putative pyruvate kinase (At3g52990) mRNA, complete cds Length = 1977 Score = 111 bits (56), Expect = 2e-21 Identities = 241/300 (80%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 1718 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 1659 Query: 279 tgcgatttgatcacaccgg-atgctttgccatggtcaagagcaaccttcaacacagattc 337 ||||| ||||| || || | |||||| |||||||| ||||||||||||| || || || Sbjct: 1658 tgcgacttgattactccagcatgcttc-ccatggtctagagcaaccttcaggactgactc 1600 Query: 338 atttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcc 397 ||||| | ||| |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 1599 gtttgtcgcacttgtagattccgcagggtgacgagggtcagcaagcatagggaagaggcc 1540 Query: 398 tctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatt 457 ||| || || ||||| || || || ||||| || || | |||||||| |||| |||||| Sbjct: 1539 tctgacaataagtgactgcctcgcctcaaaagctccactaaagctccatttcagttgatt 1480 Query: 458 tgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggcaat 517 ||| || | || |||||||||||||| | || ||||| || |||||||| |||||||| Sbjct: 1479 tgtcttaacccggggaatgacaacagaaataaccggcatcgttggcctgtatttggcaat 1420
>gb|AF367255.1|AF367255 Arabidopsis thaliana AT3g52990/F8J2_160 mRNA, complete cds Length = 1984 Score = 111 bits (56), Expect = 2e-21 Identities = 241/300 (80%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 1740 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 1681 Query: 279 tgcgatttgatcacaccgg-atgctttgccatggtcaagagcaaccttcaacacagattc 337 ||||| ||||| || || | |||||| |||||||| ||||||||||||| || || || Sbjct: 1680 tgcgacttgattactccagcatgcttc-ccatggtctagagcaaccttcaggactgactc 1622 Query: 338 atttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcc 397 ||||| | ||| |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 1621 gtttgtcgcacttgtagattccgcagggtgacgagggtcagcaagcatagggaagaggcc 1562 Query: 398 tctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatt 457 ||| || || ||||| || || || ||||| || || | |||||||| |||| |||||| Sbjct: 1561 tctgacaataagtgactgcctcgcctcaaaagctccactaaagctccatttcagttgatt 1502 Query: 458 tgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggcaat 517 ||| || | || |||||||||||||| | || ||||| || |||||||| |||||||| Sbjct: 1501 tgtcttaacccggggaatgacaacagaaataaccggcatcgttggcctgtatttggcaat 1442
>gb|AY084965.1| Arabidopsis thaliana clone 12298 mRNA, complete sequence Length = 1964 Score = 111 bits (56), Expect = 2e-21 Identities = 241/300 (80%), Gaps = 2/300 (0%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 1721 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 1662 Query: 279 tgcgatttgatcacaccgg-atgctttgccatggtcaagagcaaccttcaacacagattc 337 ||||| ||||| || || | |||||| |||||||| ||||||||||||| || || || Sbjct: 1661 tgcgacttgattactccagcatgcttc-ccatggtctagagcaaccttcaggactgactc 1603 Query: 338 atttgtagtactagtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcc 397 ||||| | ||| |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 1602 gtttgtcgcacttgtagattccgcagggtgacgagggtcagcaagcatagggaagaggcc 1543 Query: 398 tctaactatgagtgattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatt 457 ||| || || ||||| || || || ||||| || || | |||||||| |||| |||||| Sbjct: 1542 tctgacaataagtgactgcctcgcctcaaaagctccactaaagctccatttcagttgatt 1483 Query: 458 tgtttttagacgaggaatgacaacagacaggacaggcatggtgggcctgtacttggcaat 517 ||| || | || |||||||||||||| | || ||||| || |||||||| |||||||| Sbjct: 1482 tgtcttaacccggggaatgacaacagaaataaccggcatcgttggcctgtatttggcaat 1423
>gb|BT012845.1| Lycopersicon esculentum clone 113921R, mRNA sequence Length = 2018 Score = 99.6 bits (50), Expect = 9e-18 Identities = 194/242 (80%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 |||||| ||||||||||| || |||||||| || || ||||| || || || |||||||| Sbjct: 1657 atctccaactttctggcaaacgacaacacgatcgtgtgatttaataactcctgatgcttt 1598 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 ||||| |||||||||||||||| || || ||||| || | | || |||||||||| || Sbjct: 1597 tccatgatcaagagcaaccttcagtaccgactcattagttgcattattagattcagcagg 1538 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 || || |||||||| ||||| || || || |||| || || || ||||| ||||| || Sbjct: 1537 atgtcgaggatcagctagcattgggaaaagacctcggacaattagagattgccttgcctc 1478 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 |||||| || | || |||||||||| |||||| || || || |||||||||||||| || Sbjct: 1477 aaatgcaccgctaaaactccacttcagttgattagtcttgagtcgaggaatgacaaccga 1418 Query: 485 ca 486 || Sbjct: 1417 ca 1416
>ref|NM_129214.2| Arabidopsis thaliana pyruvate kinase AT2G36580 mRNA, complete cds Length = 2187 Score = 91.7 bits (46), Expect = 2e-15 Identities = 223/282 (79%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| | || Sbjct: 1679 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccggcttgctt 1620 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 |||||||| ||||| || || | || || |||||||| | ||| || ||||| || || Sbjct: 1619 cccatggtctagagccactttaagaaccgactcatttgttgcacttgttgattccgcagg 1560 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 |||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 1559 gtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgcctc 1500 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 ||| || || | ||||||||||||| |||||||| | || || |||||||||||||| Sbjct: 1499 aaaggctccgctaaagctccacttcagctgatttgtcgtaagtcggggaatgacaacaga 1440 Query: 485 caggacaggcatggtgggcctgtacttggcaattagccttgc 526 || || ||||| || || | ||| |||||||| | |||||| Sbjct: 1439 gagaacgggcatagttggacggtatttggcaatcaaccttgc 1398
>gb|BT000476.1| Arabidopsis thaliana putative pyruvate kinase (At2g36580/F1O11.21) mRNA, complete cds Length = 1584 Score = 91.7 bits (46), Expect = 2e-15 Identities = 223/282 (79%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| | || Sbjct: 1548 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccggcttgctt 1489 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 |||||||| ||||| || || | || || |||||||| | ||| || ||||| || || Sbjct: 1488 cccatggtctagagccactttaagaaccgactcatttgttgcacttgttgattccgcagg 1429 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 |||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 1428 gtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgcctc 1369 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 ||| || || | ||||||||||||| |||||||| | || || |||||||||||||| Sbjct: 1368 aaaggctccgctaaagctccacttcagctgatttgtcgtaagtcggggaatgacaacaga 1309 Query: 485 caggacaggcatggtgggcctgtacttggcaattagccttgc 526 || || ||||| || || | ||| |||||||| | |||||| Sbjct: 1308 gagaacgggcatagttggacggtatttggcaatcaaccttgc 1267
>gb|AY069894.1| Arabidopsis thaliana At2g36580/F1O11.21 mRNA, complete cds Length = 1963 Score = 91.7 bits (46), Expect = 2e-15 Identities = 223/282 (79%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| | || Sbjct: 1679 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccggcttgctt 1620 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 |||||||| ||||| || || | || || |||||||| | ||| || ||||| || || Sbjct: 1619 cccatggtctagagccactttaagaaccgactcatttgttgcacttgttgattccgcagg 1560 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 |||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 1559 gtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgcctc 1500 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 ||| || || | ||||||||||||| |||||||| | || || |||||||||||||| Sbjct: 1499 aaaggctccgctaaagctccacttcagctgatttgtcgtaagtcggggaatgacaacaga 1440 Query: 485 caggacaggcatggtgggcctgtacttggcaattagccttgc 526 || || ||||| || || | ||| |||||||| | |||||| Sbjct: 1439 gagaacgggcatagttggacggtatttggcaatcaaccttgc 1398
>emb|BX820123.1|CNS0A7Z8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1841 Score = 91.7 bits (46), Expect = 2e-15 Identities = 223/282 (79%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| | || Sbjct: 1587 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccggcttgctt 1528 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 |||||||| ||||| || || | || || |||||||| | ||| || ||||| || || Sbjct: 1527 cccatggtctagagccactttaagaaccgactcatttgttgcacttgttgattccgcagg 1468 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 |||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 1467 gtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgcctc 1408 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 ||| || || | ||||||||||||| |||||||| | || || |||||||||||||| Sbjct: 1407 aaaggctccgctaaagctccacttcagctgatttgtcgtaagtcggggaatgacaacaga 1348 Query: 485 caggacaggcatggtgggcctgtacttggcaattagccttgc 526 || || ||||| || || | ||| |||||||| | |||||| Sbjct: 1347 gagaacgggcatagttggacggtatttggcaatcaaccttgc 1306
>gb|BT013804.1| Lycopersicon esculentum clone 132725F, mRNA sequence Length = 1974 Score = 87.7 bits (44), Expect = 3e-14 Identities = 113/136 (83%) Strand = Plus / Minus Query: 351 gtagattcagcggggtgacgtggatcagcaagcatgggaaagaggcctctaactatgagt 410 ||||| ||||| || || || |||||||||||||| || || || || || || || || Sbjct: 1453 gtagactcagcaggatgtcgaggatcagcaagcattgggaaaagacccctcacaataaga 1394 Query: 411 gattgtcttgcttcaaatgcgcctgtgaagctccacttcaattgatttgtttttagacga 470 || || ||||| ||||||||||| || ||||||||||||||||||||||| || || ||| Sbjct: 1393 gactgccttgcctcaaatgcgccggtaaagctccacttcaattgatttgtcttcagtcga 1334 Query: 471 ggaatgacaacagaca 486 ||||| |||||||||| Sbjct: 1333 ggaattacaacagaca 1318
>gb|AY084900.1| Arabidopsis thaliana clone 120685 mRNA, complete sequence Length = 1937 Score = 83.8 bits (42), Expect = 5e-13 Identities = 222/282 (78%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccggatgcttt 304 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| | | Sbjct: 1673 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccggcttgctc 1614 Query: 305 gccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcggg 364 |||||||| ||||| || || | || || |||||||| | ||| || ||||| || || Sbjct: 1613 cccatggtctagagccactttaagaaccgactcatttgttgcacttgttgattccgcagg 1554 Query: 365 gtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttc 424 |||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| || Sbjct: 1553 gtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgcctc 1494 Query: 425 aaatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacaga 484 ||| || || | ||||||||||||| |||||||| | || || |||||||||||||| Sbjct: 1493 aaaggctccgctaaagctccacttcagctgatttgtcgtaagtcggggaatgacaacaga 1434 Query: 485 caggacaggcatggtgggcctgtacttggcaattagccttgc 526 || || ||||| || || | ||| |||||||| | |||||| Sbjct: 1433 gagaacgggcatagttggacggtatttggcaatcaaccttgc 1392
>gb|DQ019490.1| Lilium longiflorum clone LP31 unknown mRNA Length = 480 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 213 tcgtccagctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaaca 272 ||||| ||||| | ||||||||| || || | |||||||||||||||||| ||||||||| Sbjct: 278 tcgtcgagctcgaggatcttcactactgaagcatctcccactttctggcaaacaacaaca 219 Query: 273 cggtcatgcg 282 ||||| |||| Sbjct: 218 cggtcgtgcg 209 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 381 agcatgggaaagaggcctctaactatgagtgattgtcttgcttcaaatgcgcc 433 ||||||||||| || ||||| || || || |||||||| |||||||| ||||| Sbjct: 110 agcatgggaaatagtcctcttacaataagagattgtctagcttcaaaagcgcc 58
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 366 tgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 ||||| ||||||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 87199 tgacgaggatcagcaagcatgggaaagagacctcttacaataagtgattgccttgc 87144 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Minus Query: 254 tttctggcacacaacaacacggtcatgcgatttgatcacaccggatgctttgccatggtc 313 |||||| || |||||||||||||| || || || || || || ||||||| ||||| || Sbjct: 87589 tttctgacaaacaacaacacggtcgtgtgactttataactcccaatgcttttccatgatc 87530 Query: 314 aagagcaaccttcaacacagattcatttg 342 ||| |||||||| | | ||||||||||| Sbjct: 87529 aagggcaaccttaagaatagattcatttg 87501
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 366 tgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 ||||| ||||||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 32547 tgacgaggatcagcaagcatgggaaagagacctcttacaataagtgattgccttgc 32602 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Plus Query: 254 tttctggcacacaacaacacggtcatgcgatttgatcacaccggatgctttgccatggtc 313 |||||| || |||||||||||||| || || || || || || ||||||| ||||| || Sbjct: 32157 tttctgacaaacaacaacacggtcgtgtgactttataactcccaatgcttttccatgatc 32216 Query: 314 aagagcaaccttcaacacagattcatttg 342 ||| |||||||| | | ||||||||||| Sbjct: 32217 aagggcaaccttaagaatagattcatttg 32245
>emb|BX825591.1|CNS0A4Z9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1892 Score = 63.9 bits (32), Expect = 5e-07 Identities = 165/208 (79%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 306 ccatggtcaagagcaaccttcaacacagattcatttgtagtactagtagattcagcgggg 365 |||||||| ||||||||||||| || || || ||||| | ||| |||||||| || || Sbjct: 1621 ccatggtctagagcaaccttcaggactgactcgtttgtcgcacttgtagattccgcagg- 1563 Query: 366 tgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgcttca 425 ||||| || | ||||||||| || ||||||||||| || || ||||| || || || ||| Sbjct: 1562 tgacgagggttagcaagcatagggaagaggcctctgacaataagtgactgcctcgcctca 1503 Query: 426 aatgcgcctgtgaagctccacttcaattgatttgtttttagacgaggaatgacaacagac 485 || || || | |||||||| |||| ||||||||| || | || |||||||||||||| Sbjct: 1502 aaagctccactaaagctccatttcagttgatttgtcttaacccggggaatgacaacagaa 1443 Query: 486 aggacaggcatggtgggcctgtacttgg 513 | || ||||| || |||||||| |||| Sbjct: 1442 ataaccggcatcgttggcctgtatttgg 1415
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 52.0 bits (26), Expect = 0.002 Identities = 91/110 (82%), Gaps = 2/110 (1%) Strand = Plus / Minus Query: 219 agctcaatgatcttcacgacagaggaatctcccactttctggcacacaacaacacggtca 278 |||||||||||||| || ||||| | ||| || |||||||| ||||| || || | |||| Sbjct: 75607 agctcaatgatcttaaccacagatgcatcaccaactttctgacacaccactactctgtca 75548 Query: 279 tgcgatttgatcacacc-ggatgctttgccatggtcaagagcaaccttca 327 ||||| ||||| || || | |||| || |||||||| ||||||||||||| Sbjct: 75547 tgcgacttgattactccagcatgc-ttcccatggtctagagcaaccttca 75499 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 438 aagctccacttcaattgatttgtttttagacgaggaatgacaacagacaggacaggcatg 497 |||||||| |||| ||||||||| || | || |||||||||||||| | || ||||| Sbjct: 75150 aagctccatttcagttgatttgtcttaacccggggaatgacaacagaaataaccggcatc 75091 Query: 498 gtgggcctgtacttggcaat 517 || |||||||| |||||||| Sbjct: 75090 gttggcctgtatttggcaat 75071 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Minus Query: 363 gggtgacgtggatcagcaagcatgggaaagaggcctct 400 |||||||| || ||||||||||| || ||||||||||| Sbjct: 75310 gggtgacgagggtcagcaagcatagggaagaggcctct 75273
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete sequence Length = 104364 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 363 gggtgacgtggatcagcaagcatgggaaagaggcctctaactatgagtgattgtcttgc 421 |||||||| ||||||||||||||||| || || ||||| || || ||||| || ||||| Sbjct: 91538 gggtgacgaggatcagcaagcatggggaaaagacctctgacaataagtgactgccttgc 91480 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccgg 297 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| Sbjct: 91793 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccgg 91741 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 438 aagctccacttcaattgatttgtttttagacgaggaatgacaacagacaggacaggcatg 497 ||||||||||||| |||||||| | || || |||||||||||||| || || ||||| Sbjct: 91136 aagctccacttcagctgatttgtcgtaagtcggggaatgacaacagagagaacgggcata 91077 Query: 498 gtgggcctgtacttggcaat 517 || || | ||| |||||||| Sbjct: 91076 gttggacggtatttggcaat 91057
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 agattcatttgtagtactagta 353 |||||||||||||||||||||| Sbjct: 115879 agattcatttgtagtactagta 115858
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 agattcatttgtagtactagta 353 |||||||||||||||||||||| Sbjct: 19788612 agattcatttgtagtactagta 19788591
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 agattcatttgtagtactagta 353 |||||||||||||||||||||| Sbjct: 13052 agattcatttgtagtactagta 13031
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 agattcatttgtagtactagta 353 |||||||||||||||||||||| Sbjct: 134298 agattcatttgtagtactagta 134277
>ref|NM_129215.2| Arabidopsis thaliana ProT3 (PROLINE TRANSPORTER 3); amino acid permease AT2G36590 (ProT3) mRNA, complete cds Length = 1924 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 245 atctcccactttctggcacacaacaacacggtcatgcgatttgatcacaccgg 297 ||||||||||||||| || || ||||| | |||||| || |||||||| |||| Sbjct: 1858 atctcccactttctgacagaccacaactctgtcatgtgacttgatcactccgg 1910
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 492 ggcatggtgggcctgtacttggcaattagccttgcag 528 ||||||| ||||||||||| ||||| |||||||||| Sbjct: 11793226 ggcatggctggcctgtacttcgcaatgagccttgcag 11793262
>gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome 14, complete sequence Length = 204350 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 acttcaattgatttgttttta 465 ||||||||||||||||||||| Sbjct: 172144 acttcaattgatttgttttta 172124
>gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, complete sequence Length = 172160 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 tgcaaaactatagatagaatt 137 ||||||||||||||||||||| Sbjct: 64683 tgcaaaactatagatagaatt 64663
>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence Length = 135692 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 ttcaacacagattcatttgtagtac 348 |||||||||||||||||| |||||| Sbjct: 3965 ttcaacacagattcatttatagtac 3989
>gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, complete sequence Length = 101800 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 ttcaacacagattcatttgtagtac 348 |||||||||||||||||| |||||| Sbjct: 18482 ttcaacacagattcatttatagtac 18458
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 492 ggcatggtgggcctgtacttggcaattagccttgcag 528 ||||||| ||||||||||| ||||| |||||||||| Sbjct: 11789989 ggcatggctggcctgtacttcgcaatgagccttgcag 11790025
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 492 ggcatggtgggcctgtacttggcaattagccttgcag 528 ||||||| ||||||||||| ||||| |||||||||| Sbjct: 117427 ggcatggctggcctgtacttcgcaatgagccttgcag 117391
>gb|AC098718.5| Mus musculus BAC clone RP23-2K11 from chromosome 14, complete sequence Length = 199906 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 acttcaattgatttgttttta 465 ||||||||||||||||||||| Sbjct: 65619 acttcaattgatttgttttta 65639
>gb|BC045572.1| Homo sapiens hypothetical protein LOC152024, mRNA (cDNA clone IMAGE:4827576) Length = 2963 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 1510 ggatcagcaagcatgggaaa 1529
>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence Length = 162550 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 tcgttttggcctagtcaaaaatct 179 |||||||||||| ||||||||||| Sbjct: 118393 tcgttttggccttgtcaaaaatct 118370
>gb|BC033355.1| Homo sapiens hypothetical protein LOC152024, mRNA (cDNA clone IMAGE:4829078) Length = 2248 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 1525 ggatcagcaagcatgggaaa 1544
>emb|AL135788.11| Human DNA sequence from clone RP11-352G21 on chromosome 9p23-24.3, complete sequence Length = 96203 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ctttgccatggtcaagagca 320 |||||||||||||||||||| Sbjct: 87165 ctttgccatggtcaagagca 87184
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tcgtccagctcaatgatctt 232 |||||||||||||||||||| Sbjct: 279142 tcgtccagctcaatgatctt 279123
>gb|BC039347.1| Homo sapiens hypothetical protein LOC152024, mRNA (cDNA clone IMAGE:5269468) Length = 1722 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 1000 ggatcagcaagcatgggaaa 1019
>emb|AJ547634.1|PVU547634 Phaseolus vulgaris partial mRNA for carbonic anhydrase (ca gene) Length = 313 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aacctgaggacatatccata 47 |||||||||||||||||||| Sbjct: 224 aacctgaggacatatccata 243
>gb|AC098971.2| Homo sapiens chromosome 3 clone RP11-118N13, complete sequence Length = 175409 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 125351 ggatcagcaagcatgggaaa 125332
>ref|XM_944430.1| PREDICTED: Homo sapiens hypothetical protein LOC152024 (LOC152024), mRNA Length = 2955 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 1519 ggatcagcaagcatgggaaa 1538
>ref|XM_379183.2| PREDICTED: Homo sapiens hypothetical protein LOC152024 (LOC152024), mRNA Length = 2955 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 ggatcagcaagcatgggaaa 391 |||||||||||||||||||| Sbjct: 1519 ggatcagcaagcatgggaaa 1538
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 acaggacaggcatggtgggcctgt 507 |||| ||||||||||||||||||| Sbjct: 143949 acagaacaggcatggtgggcctgt 143926
>gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosome 17, complete sequence Length = 183626 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 tcgttttggcctagtcaaaaatct 179 |||||||||||| ||||||||||| Sbjct: 36742 tcgttttggccttgtcaaaaatct 36719
>gb|AC011747.8| Homo sapiens BAC clone RP11-434B12 from 2, complete sequence Length = 177433 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ggacaggcatggtgggcctg 506 |||||||||||||||||||| Sbjct: 51657 ggacaggcatggtgggcctg 51638
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cttcaattgatttgttttta 465 |||||||||||||||||||| Sbjct: 2212038 cttcaattgatttgttttta 2212019
>gb|U35047.1|EPIMRAT9 Rattus norvegicus epimorphin (Epim) gene, exon 9 and partial cds Length = 905 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 tgccatggtcaagagcaaccttca 327 ||||||||||||||||| |||||| Sbjct: 701 tgccatggtcaagagcatccttca 678
>gb|AC140470.3| Mus musculus BAC clone RP24-396I22 from 6, complete sequence Length = 166343 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cagacaggacaggcatggtg 500 |||||||||||||||||||| Sbjct: 137292 cagacaggacaggcatggtg 137273
>gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, complete sequence Length = 201210 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 acaggacaggcatggtgggcctgt 507 |||| ||||||||||||||||||| Sbjct: 153524 acagaacaggcatggtgggcctgt 153547
>gb|AC140270.3| Mus musculus BAC clone RP23-456C8 from 6, complete sequence Length = 162117 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cagacaggacaggcatggtg 500 |||||||||||||||||||| Sbjct: 51213 cagacaggacaggcatggtg 51194
>gb|M65127.1|UMPGEP10S1 Human snRNP E protein pseudogene 110, 5' end Length = 436 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ggacaggcatggtgggcctg 506 |||||||||||||||||||| Sbjct: 413 ggacaggcatggtgggcctg 394
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tcgtccagctcaatgatctt 232 |||||||||||||||||||| Sbjct: 43053 tcgtccagctcaatgatctt 43072 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,535,598 Number of Sequences: 3902068 Number of extensions: 4535598 Number of successful extensions: 81292 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80900 Number of HSP's gapped (non-prelim): 371 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
