>ref|NM_191702.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1467

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 161  tgggaggcatnacgactgtaaaactgatcaagggttttcgccggtatacggnggagcagc 220
            |||||||||| ||| || ||| |||| |||||||||||||| ||||||||| | ||||||
Sbjct: 1463 tgggaggcatcacggctataatactggtcaagggttttcgctggtatacggtgaagcagc 1404

                                             
Query: 221  tcgcgggggaagatgcngagtagggtccaggcg 253
            || ||||| |||||||  ||||| | |||||||
Sbjct: 1403 tctcggggaaagatgcgcagtagtgaccaggcg 1371

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                            
Query: 161      tgggaggcatnacgactgtaaaactgatcaagggttttcgccggtatacggnggagcagc 220
                |||||||||| ||| || ||| |||| |||||||||||||| ||||||||| | ||||||
Sbjct: 29535333 tgggaggcatcacggctataatactggtcaagggttttcgctggtatacggtgaagcagc 29535274

                                                 
Query: 221      tcgcgggggaagatgcngagtagggtccaggcg 253
                || ||||| |||||||  ||||| | |||||||
Sbjct: 29535273 tctcggggaaagatgcgcagtagtgaccaggcg 29535241

>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1142C05
          Length = 151457

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 161  tgggaggcatnacgactgtaaaactgatcaagggttttcgccggtatacggnggagcagc 220
            |||||||||| ||| || ||| |||| |||||||||||||| ||||||||| | ||||||
Sbjct: 5153 tgggaggcatcacggctataatactggtcaagggttttcgctggtatacggtgaagcagc 5094

                                             
Query: 221  tcgcgggggaagatgcngagtagggtccaggcg 253
            || ||||| |||||||  ||||| | |||||||
Sbjct: 5093 tctcggggaaagatgcgcagtagtgaccaggcg 5061

>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0456F08
          Length = 156850

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                          
Query: 161    tgggaggcatnacgactgtaaaactgatcaagggttttcgccggtatacggnggagcagc 220
              |||||||||| ||| || ||| |||| |||||||||||||| ||||||||| | ||||||
Sbjct: 101607 tgggaggcatcacggctataatactggtcaagggttttcgctggtatacggtgaagcagc 101548

                                               
Query: 221    tcgcgggggaagatgcngagtagggtccaggcg 253
              || ||||| |||||||  ||||| | |||||||
Sbjct: 101547 tctcggggaaagatgcgcagtagtgaccaggcg 101515

>ref|NM_120012.3| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
            phosphorylative mechanism / hydrogen-transporting ATP
            synthase, rotational mechanism /> AT4G38510 transcript
            variant AT4G38510.1 mRNA, complete cds
          Length = 2347

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1497 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1438

              
Query: 233  at 234
            ||
Sbjct: 1437 at 1436

>ref|NM_001036731.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
            phosphorylative mechanism / hydrogen-transporting ATP
            synthase, rotational mechanism /> AT4G38510 transcript
            variant AT4G38510.4 mRNA, complete cds
          Length = 2386

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1536 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1477

              
Query: 233  at 234
            ||
Sbjct: 1476 at 1475

>ref|NM_202978.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
            phosphorylative mechanism / hydrogen-transporting ATP
            synthase, rotational mechanism /> AT4G38510 transcript
            variant AT4G38510.2 mRNA, complete cds
          Length = 2377

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1527 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1468

              
Query: 233  at 234
            ||
Sbjct: 1467 at 1466

>ref|NM_001036730.1| Arabidopsis thaliana ATP binding / hydrogen-exporting ATPase,
            phosphorylative mechanism / hydrogen-transporting ATP
            synthase, rotational mechanism /> AT4G38510 transcript
            variant AT4G38510.3 mRNA, complete cds
          Length = 2485

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1635 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1576

              
Query: 233  at 234
            ||
Sbjct: 1575 at 1574

>ref|NM_120011.2| Arabidopsis thaliana unknown protein AT4G38500 mRNA, complete cds
          Length = 2818

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 2640 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 2699

              
Query: 233  at 234
            ||
Sbjct: 2700 at 2701

>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                          
Query: 173    cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
              ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 120113 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 120172

                
Query: 233    at 234
              ||
Sbjct: 120173 at 120174

>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22I13 (ESSA project)
          Length = 93760

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 173   cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
             ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 79155 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 79214

               
Query: 233   at 234
             ||
Sbjct: 79215 at 79216

>gb|AY090334.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1167

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1151 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1092

              
Query: 233  at 234
            ||
Sbjct: 1091 at 1090

>gb|AY059167.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1464

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1448 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1389

              
Query: 233  at 234
            ||
Sbjct: 1388 at 1387

>dbj|AK222158.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit B2,
           complete cds, clone: RAFL23-16-B12
          Length = 1201

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 173 cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
           ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 857 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 798

             
Query: 233 at 234
           ||
Sbjct: 797 at 796

>gb|AY045609.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1829

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1494 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1435

              
Query: 233  at 234
            ||
Sbjct: 1434 at 1433

>gb|AY039518.1| Arabidopsis thaliana AT4g38510/F20M13_70 mRNA, complete cds
          Length = 1862

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 1527 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 1468

              
Query: 233  at 234
            ||
Sbjct: 1467 at 1466

>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 173   cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
             ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 45414 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 45355

               
Query: 233   at 234
             ||
Sbjct: 45354 at 45353

>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 173   cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
             ||||||||||||||||||||||||||||| ||||||||| | || | ||| |||||||||
Sbjct: 21054 cgactgtaaaactgatcaagggttttcgcgggtatacggtgaagtaactcacgggggaag 21113

               
Query: 233   at 234
             ||
Sbjct: 21114 at 21115

>dbj|AK103899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150J04, full
            insert sequence
          Length = 1893

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                        
Query: 161  tgggaggcatnacgactgtaaaactgatcaagggttttcgccggtatacggnggagcagc 220
            |||||||||| ||| || ||| |||| |||||||||||||| ||||||||| | ||||||
Sbjct: 1560 tgggaggcatcacggctataatactggtcaagggttttcgctggtatacggtgaagcagc 1501

                                             
Query: 221  tcgcgggggaagatgcngagtagggtccaggcg 253
            || ||| | |||||||  ||||| | |||||||
Sbjct: 1500 tctcggtgaaagatgcgcagtagtgaccaggcg 1468

>gb|L11862.1|BLYVATP57A Hordeum vulgare vacuolar ATPase B subunit isoform mRNA, complete cds
          Length = 1923

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 197  ttcgccggtatacggnggagcagctcgcgggggaagatgc 236
            ||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 1506 ttcgcggggatacggtggagcagctcgcgagggaagatgc 1467

>gb|AF026212.1| Caenorhabditis elegans cosmid F52G3, complete sequence
          Length = 42696

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 9     ctgaaaaaataattgaagttttg 31
             |||||||||||||||||||||||
Sbjct: 13923 ctgaaaaaataattgaagttttg 13945

>emb|AJ438590.1|MCR438590 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit B
            (vha-B gene)
          Length = 1962

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 173  cgactgtaaaactgatcaagggttttcgccggtatacggnggagcagctcgcgggggaag 232
            ||||||||| | || || ||||| || || || |||||| |||| ||||| |||||||||
Sbjct: 1524 cgactgtaatattggtcgagggtctttgcaggaatacggtggagaagctcacgggggaag 1465

                             
Query: 233  atgcngagtagggtcca 249
            || | ||| ||||||||
Sbjct: 1464 attctgaggagggtcca 1448

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 5       ctttctgaaaaaataattgaag 26
               ||||||||||||||||||||||
Sbjct: 1120364 ctttctgaaaaaataattgaag 1120343

>emb|AL353897.7| Human DNA sequence from clone RP5-859D17 on chromosome 11p13-14.3
             Contains ESTs, STSs and GSSs, complete sequence
          Length = 109891

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     tgttctttctgaaaaaataattgaa 25
             ||||||||| |||||||||||||||
Sbjct: 99591 tgttctttcggaaaaaataattgaa 99615

>gb|AC090124.6| Homo sapiens chromosome 11, clone RP11-460B17, complete sequence
          Length = 161935

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     tgttctttctgaaaaaataattgaa 25
             ||||||||| |||||||||||||||
Sbjct: 58529 tgttctttcggaaaaaataattgaa 58553

>ref|XM_633641.1| Dictyostelium discoideum hypothetical protein (DDB0218571), partial
           mRNA
          Length = 948

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  acaaatttttacaaaaaatt 62
           ||||||||||||||||||||
Sbjct: 351 acaaatttttacaaaaaatt 370

>gb|AC136471.1| Solanum demissum chromosome 11 BAC PGEC561 genomic sequence, complete
             sequence
          Length = 123428

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 2     gttctttctgaaaaaataattgaagttttgct 33
             |||||||| |||||||| || |||||||||||
Sbjct: 88890 gttctttcagaaaaaatgatagaagttttgct 88859

>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence
          Length = 215238

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     acaaatttttacaaaaaatt 62
              ||||||||||||||||||||
Sbjct: 110112 acaaatttttacaaaaaatt 110093

>gb|AC146247.3| Pan troglodytes BAC clone RP43-27N23 from 7, complete sequence
          Length = 157530

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   acaacaatcaattcccatga 138
             ||||||||||||||||||||
Sbjct: 71930 acaacaatcaattcccatga 71949

>gb|AC124522.4| Mus musculus BAC clone RP23-397A19 from chromosome 10, complete sequence
          Length = 196485

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      tgttctttctgaaaaaataa 20
              ||||||||||||||||||||
Sbjct: 129651 tgttctttctgaaaaaataa 129632

>gb|AC096562.1| Homo sapiens BAC clone RP11-261E4 from 7, complete sequence
          Length = 138224

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   acaacaatcaattcccatga 138
             ||||||||||||||||||||
Sbjct: 70059 acaacaatcaattcccatga 70078

>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence
          Length = 146189

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ataattgaagttttgctaat 36
             ||||||||||||||||||||
Sbjct: 61188 ataattgaagttttgctaat 61207

>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence
          Length = 92738

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aaaataattgaagttttgct 33
             ||||||||||||||||||||
Sbjct: 16074 aaaataattgaagttttgct 16055

>gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, complete sequence
          Length = 158750

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      ttctgaaaaaataattgaagtttt 30
              ||||| ||||||||||||||||||
Sbjct: 125485 ttctggaaaaataattgaagtttt 125462

>gb|AC026003.10| Homo sapiens chromosome 18, clone RP11-715P20, complete sequence
          Length = 178733

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      ttctgaaaaaataattgaagtttt 30
              ||||| ||||||||||||||||||
Sbjct: 178520 ttctggaaaaataattgaagtttt 178543

>emb|AL732577.5| Zebrafish DNA sequence from clone RP71-1M10, complete sequence
          Length = 107508

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ataacacaatatatattaac 88
             ||||||||||||||||||||
Sbjct: 65051 ataacacaatatatattaac 65032

>emb|AL117693.5|CNS01DRO Human chromosome 14 DNA sequence BAC R-562L8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 179598

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aaatttttacaaaaaattgg 64
             ||||||||||||||||||||
Sbjct: 42927 aaatttttacaaaaaattgg 42908


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,087,683
Number of Sequences: 3902068
Number of extensions: 3087683
Number of successful extensions: 65482
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65378
Number of HSP's gapped (non-prelim): 104
length of query: 253
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 231
effective length of database: 17,147,199,772
effective search space: 3961003147332
effective search space used: 3961003147332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)