ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags36a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483307.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
3dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
4dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
5dbj|AK065422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
6gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, com... 44 0.21
7emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on ch... 44 0.21
8emb|BX537282.9| Zebrafish DNA sequence from clone DKEY-90A24 in ... 44 0.21
9gb|AC105411.1| Homo sapiens chromosome 16 clone RP11-354A20, com... 44 0.21
10gb|AC150259.4| Aedes aegypti, clone XX-10B1, complete sequence 44 0.21
11gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, comp... 42 0.84
12gb|BC056736.1| Danio rerio prostaglandin-endoperoxide synthase 2... 42 0.84
13gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, com... 42 0.84
14emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chro... 42 0.84
15emb|BX571659.1| Wolinella succinogenes, complete genome; segment... 42 0.84
16emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 i... 42 0.84
17gb|BC063232.1| Danio rerio prostaglandin-endoperoxide synthase 2... 42 0.84
18dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02,... 42 0.84
19dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, c... 42 0.84
20emb|BX569799.6| Zebrafish DNA sequence from clone DKEY-10C21 in ... 42 0.84
21gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 0.84
22gb|AY028585.1| Danio rerio prostaglandin G/H synthase 2 (ptgs2) ... 42 0.84
23gb|AC087259.18| Homo sapiens 12p BAC RP11-387J7 (Roswell Park Ca... 42 0.84
24ref|NM_153657.1| Danio rerio prostaglandin-endoperoxide synthase... 42 0.84
25emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 i... 42 0.84
26emb|AJ544822.1|DRE544822 Danio rerio mRNA for interferon (ifn ge... 42 0.84
27emb|AJ544821.1|DRE544821 Danio rerio mRNA for interferon (ifn ge... 42 0.84
28emb|AJ544820.1|DRE544820 Danio rerio ifn gene for interferon, ex... 42 0.84
29emb|AL935199.4| Zebrafish DNA sequence from clone CH211-241L3, c... 42 0.84
30emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in l... 42 0.84
31emb|CR847994.10| Zebrafish DNA sequence from clone CH211-203H15 ... 42 0.84
32emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 i... 42 0.84
33emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in ... 42 0.84
34emb|BX005440.3| Zebrafish DNA sequence from clone DKEY-248K5, co... 42 0.84
35emb|AL929342.7| Zebrafish DNA sequence from clone DKEY-225K7, co... 42 0.84
36ref|NM_207640.1| Danio rerio interferon (ifn), mRNA 42 0.84
37gb|AC034265.9| Mus musculus chromosome 1, clone RP23-180K2, comp... 40 3.3
38gb|AF346403.1| Echinococcus granulosus genotype 4 mitochondrion,... 40 3.3
39gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome... 40 3.3
40emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chro... 40 3.3
41emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in l... 40 3.3
42emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 i... 40 3.3
43gb|AC104096.5| Mus musculus BAC clone RP24-370O22 from chromosom... 40 3.3
44gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome... 40 3.3
45gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, comple... 40 3.3
46gb|AC145784.1| Pan troglodytes BAC clone RP43-51D12 from 7, comp... 40 3.3
47emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chro... 40 3.3
48emb|AL031311.1|HS105D16 Human DNA sequence from clone RP6-105D16... 40 3.3
49emb|AL645790.8| Zebrafish DNA sequence from clone RP71-6L08 in l... 40 3.3
50gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosom... 40 3.3
51emb|AL645750.9| Zebrafish DNA sequence from clone RP71-22E02 in ... 40 3.3
52emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, ... 40 3.3
53emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone BACR19J1 40 3.3
54emb|CR457484.9| Zebrafish DNA sequence from clone CH211-132F3 in... 40 3.3
55gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell ... 40 3.3
56emb|BX510351.9| Zebrafish DNA sequence from clone DKEYP-89A3 in ... 40 3.3
57emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in... 40 3.3
58gb|AC091208.4| Drosophila melanogaster 3L BAC RP98-46N3 (Roswell... 40 3.3
59gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswel... 40 3.3
60dbj|AK140607.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 3.3
61gb|AC099332.2| Homo sapiens chromosome 3 clone RP11-256B12, comp... 40 3.3
62gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, co... 40 3.3
63gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22,... 40 3.3
64gb|AC024132.7| Homo sapiens BAC clone RP11-415C15 from 4, comple... 40 3.3
65emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in l... 40 3.3
66gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map ... 40 3.3
67gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosom... 40 3.3
68emb|BX511232.6| Zebrafish DNA sequence from clone CH211-11K18 in... 40 3.3
69emb|BX511219.7| Zebrafish DNA sequence from clone DKEYP-93A3, co... 40 3.3
70emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in l... 40 3.3
71emb|BX255947.6| Zebrafish DNA sequence from clone CH211-260D9 in... 40 3.3
72gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome... 40 3.3
73gb|BC048725.1| Mus musculus, clone IMAGE:6505521, mRNA 40 3.3
74emb|BX537347.12| Zebrafish DNA sequence from clone RP71-78P1 in ... 40 3.3
75emb|AL954168.6| Zebrafish DNA sequence from clone DKEY-3I24 in l... 40 3.3
76emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in ... 40 3.3
77emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chr... 40 3.3
78emb|AL935117.16| Zebrafish DNA sequence from clone CH211-197G22 ... 40 3.3
79dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 3.3
80emb|BX936454.25| Zebrafish DNA sequence from clone DKEY-29M11 in... 40 3.3
81emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 i... 40 3.3
82emb|BX510986.8| Zebrafish DNA sequence from clone CH211-173P18 i... 40 3.3
83emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in ... 40 3.3
84gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24 40 3.3
85gb|AE003564.3| Drosophila melanogaster chromosome 3L, section 21... 40 3.3
86gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 40 3.3
87emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 40 3.3
88emb|AL935281.7| Zebrafish DNA sequence from clone CH211-237G1, c... 40 3.3
89emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chr... 40 3.3 
>ref|XM_483307.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1731

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 212  tgtctatncggtcatgcttccttttgttgggtctggagaaaaagc 256
            ||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 1720 tgtctatccggtcatgctttcttttgttaggcctggagaaaaagc 1676
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 212      tgtctatncggtcatgcttccttttgttgggtctggagaaaaagc 256
                ||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 25371258 tgtctatccggtcatgctttcttttgttaggcctggagaaaaagc 25371302
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0711H09
          Length = 185858

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 212  tgtctatncggtcatgcttccttttgttgggtctggagaaaaagc 256
            ||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 2574 tgtctatccggtcatgctttcttttgttaggcctggagaaaaagc 2618
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016N23
          Length = 147336

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 212    tgtctatncggtcatgcttccttttgttgggtctggagaaaaagc 256
              ||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 146443 tgtctatccggtcatgctttcttttgttaggcctggagaaaaagc 146487
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>dbj|AK065422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013009P13, full
            insert sequence
          Length = 1811

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 212  tgtctatncggtcatgcttccttttgttgggtctggagaaaaagc 256
            ||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 1423 tgtctatccggtcatgctttcttttgttaggcctggagaaaaagc 1379
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>gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, complete sequence
          Length = 181387

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 63     aaaaaataaataaattacaaacgaca 88
              ||||||||||||||| ||||||||||
Sbjct: 164204 aaaaaataaataaataacaaacgaca 164179
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>emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on chromosome 9 Contains the
             UBAP gene for ubiquitin associated protein, the gene for a
             novel protein similar to kinesin-like proteins, the KIF24
             gene for kinesin family member 24 (FLJ10933), ribosomal
             protein S8 (RPS8) and L35A (RPL35A) pseudogenes, a serine
             (or cysteine) proteinase inhibitor (collagen binding
             protein 1) (SERPINH1) pseudogene, the 5' end of the NUDT2
             gene for nudix (nucleoside diphosphate linked moiety
             X)-type motif 2 and three CpG islands, complete sequence
          Length = 167998

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 61    ccaaaaaataaataaattacaa 82
             ||||||||||||||||||||||
Sbjct: 22710 ccaaaaaataaataaattacaa 22689
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>emb|BX537282.9| Zebrafish DNA sequence from clone DKEY-90A24 in linkage group 5,
            complete sequence
          Length = 124378

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 63   aaaaaataaataaattacaaac 84
            ||||||||||||||||||||||
Sbjct: 7345 aaaaaataaataaattacaaac 7324
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>gb|AC105411.1| Homo sapiens chromosome 16 clone RP11-354A20, complete sequence
          Length = 172797

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 63    aaaaaataaataaattacaaacgaca 88
             ||||||||||||||| ||||||||||
Sbjct: 15769 aaaaaataaataaataacaaacgaca 15744
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>gb|AC150259.4| Aedes aegypti, clone XX-10B1, complete sequence
          Length = 206579

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 127   tcatttcaccgcaaaattctct 148
             ||||||||||||||||||||||
Sbjct: 30419 tcatttcaccgcaaaattctct 30398
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>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence
          Length = 239600

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     aaaaaataaataaattacaaa 83
              |||||||||||||||||||||
Sbjct: 183191 aaaaaataaataaattacaaa 183171
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>gb|BC056736.1| Danio rerio prostaglandin-endoperoxide synthase 2, mRNA (cDNA clone
            MGC:66037 IMAGE:6794654), complete cds
          Length = 2147

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 1925 aaaaaataaataaattacaaa 1905
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>gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, complete sequence
          Length = 178935

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    ccaaaaaataaataaattaca 81
             |||||||||||||||||||||
Sbjct: 74459 ccaaaaaataaataaattaca 74479
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>emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chromosome 7, complete
             sequence
          Length = 178646

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    cccgccaaaaaataaataaat 77
             |||||||||||||||||||||
Sbjct: 54231 cccgccaaaaaataaataaat 54211
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>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7
          Length = 349970

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     aaaaaataaataaattacaaa 83
              |||||||||||||||||||||
Sbjct: 290866 aaaaaataaataaattacaaa 290846
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>emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 in linkage group 8,
             complete sequence
          Length = 91038

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 53722 aaaaaataaataaattacaaa 53742
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>gb|BC063232.1| Danio rerio prostaglandin-endoperoxide synthase 2, mRNA (cDNA clone
            MGC:77710 IMAGE:7000521), complete cds
          Length = 2126

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 1911 aaaaaataaataaattacaaa 1891
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>dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02, complete sequence
          Length = 162358

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    ccaaaaaataaataaattaca 81
             |||||||||||||||||||||
Sbjct: 74236 ccaaaaaataaataaattaca 74256
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>dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, complete sequences
          Length = 127252

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    ccaaaaaataaataaattaca 81
             |||||||||||||||||||||
Sbjct: 64511 ccaaaaaataaataaattaca 64531
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>emb|BX569799.6| Zebrafish DNA sequence from clone DKEY-10C21 in linkage group 24,
             complete sequence
          Length = 56631

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    caaaaaataaataaattacaa 82
             |||||||||||||||||||||
Sbjct: 19251 caaaaaataaataaattacaa 19231
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       ccaaaaaataaataaattaca 81
                |||||||||||||||||||||
Sbjct: 16618455 ccaaaaaataaataaattaca 16618435
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>gb|AY028585.1| Danio rerio prostaglandin G/H synthase 2 (ptgs2) mRNA, complete cds
          Length = 2150

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 1936 aaaaaataaataaattacaaa 1916
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>gb|AC087259.18| Homo sapiens 12p BAC RP11-387J7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 130000

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    ccaaaaaataaataaattaca 81
             |||||||||||||||||||||
Sbjct: 11925 ccaaaaaataaataaattaca 11905
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>ref|NM_153657.1| Danio rerio prostaglandin-endoperoxide synthase 2 (ptgs2), mRNA
          Length = 2150

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 1936 aaaaaataaataaattacaaa 1916
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>emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 in linkage group 1,
             complete sequence
          Length = 169067

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 38181 aaaaaataaataaattacaaa 38161
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>emb|AJ544822.1|DRE544822 Danio rerio mRNA for interferon (ifn gene), allele B
          Length = 736

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  ccaaaaaataaataaattaca 81
           |||||||||||||||||||||
Sbjct: 584 ccaaaaaataaataaattaca 604
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>emb|AJ544821.1|DRE544821 Danio rerio mRNA for interferon (ifn gene), allele A
          Length = 736

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  ccaaaaaataaataaattaca 81
           |||||||||||||||||||||
Sbjct: 584 ccaaaaaataaataaattaca 604
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>emb|AJ544820.1|DRE544820 Danio rerio ifn gene for interferon, exons 1-5
          Length = 5078

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   ccaaaaaataaataaattaca 81
            |||||||||||||||||||||
Sbjct: 4926 ccaaaaaataaataaattaca 4946
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>emb|AL935199.4| Zebrafish DNA sequence from clone CH211-241L3, complete sequence
          Length = 139520

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 74419 aaaaaataaataaattacaaa 74399
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>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10,
             complete sequence
          Length = 202134

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 65711 aaaaaataaataaattacaaa 65691
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>emb|CR847994.10| Zebrafish DNA sequence from clone CH211-203H15 in linkage group 4,
            complete sequence
          Length = 100991

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 988  aaaaaataaataaattacaaa 1008
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>emb|AL929171.9| Zebrafish DNA sequence from clone CH211-132P20 in linkage group 4,
            complete sequence
          Length = 176577

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 63   aaaaaataaataaattacaaa 83
            |||||||||||||||||||||
Sbjct: 1013 aaaaaataaataaattacaaa 993
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>emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in linkage group 5,
             complete sequence
          Length = 131912

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 31605 aaaaaataaataaattacaaa 31625
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>emb|BX005440.3| Zebrafish DNA sequence from clone DKEY-248K5, complete sequence
          Length = 166695

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 61   ccaaaaaataaataaattaca 81
            |||||||||||||||||||||
Sbjct: 2054 ccaaaaaataaataaattaca 2074
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>emb|AL929342.7| Zebrafish DNA sequence from clone DKEY-225K7, complete sequence
          Length = 117082

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    aaaaaataaataaattacaaa 83
             |||||||||||||||||||||
Sbjct: 58172 aaaaaataaataaattacaaa 58152
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>ref|NM_207640.1| Danio rerio interferon (ifn), mRNA
          Length = 694

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  ccaaaaaataaataaattaca 81
           |||||||||||||||||||||
Sbjct: 614 ccaaaaaataaataaattaca 634
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>gb|AC034265.9| Mus musculus chromosome 1, clone RP23-180K2, complete sequence
          Length = 218310

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 61     ccaaaaaataaataaattacaaacgaca 88
              ||||||||||||||||| ||||| ||||
Sbjct: 192535 ccaaaaaataaataaataacaaaggaca 192562
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>gb|AF346403.1| Echinococcus granulosus genotype 4 mitochondrion, complete genome
          Length = 13598

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 57   cccgccaaaaaataaataaattac 80
            ||||||||||||||||||| ||||
Sbjct: 3147 cccgccaaaaaataaataacttac 3124
to top
>gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome 14, complete sequence
          Length = 236917

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 69024 aaaaataaataaattacaaa 69005
to top
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete
             sequence
          Length = 202398

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 93484 aaaaaataaataaattacaa 93503
to top
>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11,
             complete sequence
          Length = 263287

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    ccgccaaaaaataaataaat 77
             ||||||||||||||||||||
Sbjct: 33942 ccgccaaaaaataaataaat 33923
to top
>emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 in linkage group 3,
             complete sequence
          Length = 200759

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 23719 aaaaataaataaattacaaa 23700
to top
>gb|AC104096.5| Mus musculus BAC clone RP24-370O22 from chromosome 8, complete sequence
          Length = 160450

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 63863 aaaaaataaataaattacaa 63844
to top
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence
          Length = 181261

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 34604 aaaaataaataaattacaaa 34623
to top
>gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, complete sequence
          Length = 166182

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 61    ccaaaaaataaataaattacaaacgaca 88
             ||||||||||||||||| ||||| ||||
Sbjct: 80041 ccaaaaaataaataaataacaaaggaca 80014
to top
>gb|AC145784.1| Pan troglodytes BAC clone RP43-51D12 from 7, complete sequence
          Length = 23736

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gccaaaaaataaataaatta 79
             ||||||||||||||||||||
Sbjct: 16811 gccaaaaaataaataaatta 16830
to top
>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains part
             of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM), complete sequence
          Length = 91827

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 68625 aaaaataaataaattacaaa 68606
to top
>emb|AL031311.1|HS105D16 Human DNA sequence from clone RP6-105D16 on chromosome Xp11.3-11.4
             Contains a  laminin receptor 1 (ribosomal protein SA
             67kDa) (LAMR1) pseudogene, complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    ccaaaaaataaataaattacaaac 84
             ||||||||||||||||||| ||||
Sbjct: 57264 ccaaaaaataaataaattaaaaac 57241
to top
>emb|AL645790.8| Zebrafish DNA sequence from clone RP71-6L08 in linkage group 23
             Contains the 3' part of a novel gene similar to CELSR
             (cadherin, EGF LAG seven-pass G-type receptor), part of a
             novel gene and a CpG island, complete sequence
          Length = 165257

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ccaaaaaataaataaattac 80
             ||||||||||||||||||||
Sbjct: 84338 ccaaaaaataaataaattac 84357
to top
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 163997 aaaaaataaataaattacaa 164016
to top
>emb|AL645750.9| Zebrafish DNA sequence from clone RP71-22E02 in linkage group 4
             Contains part of a novel gene similar to human CELSR1 (EGF
             LAG seven-pass G-type receptor 1 cadherin) and two CpG
             islands, complete sequence
          Length = 151797

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 83764 aaaaaataaataaattacaa 83783
to top
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
          Length = 199987

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     ttcccgccaaaaaataaata 74
              ||||||||||||||||||||
Sbjct: 135989 ttcccgccaaaaaataaata 136008
to top
>emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone BACR19J1
          Length = 95463

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    gccaaaaaataaataaatta 79
             ||||||||||||||||||||
Sbjct: 25644 gccaaaaaataaataaatta 25625
to top
>emb|CR457484.9| Zebrafish DNA sequence from clone CH211-132F3 in linkage group 18,
              complete sequence
          Length = 169672

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 139509 aaaaaataaataaattacaa 139528
to top
>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182490

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    gccaaaaaataaataaatta 79
             ||||||||||||||||||||
Sbjct: 37107 gccaaaaaataaataaatta 37088
to top
>emb|BX510351.9| Zebrafish DNA sequence from clone DKEYP-89A3 in linkage group 10,
             complete sequence
          Length = 102138

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 80191 aaaaaataaataaattacaa 80172
to top
>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5,
             complete sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 25976 aaaaaataaataaattacaa 25957
to top
>gb|AC091208.4| Drosophila melanogaster 3L BAC RP98-46N3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182705

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 28948 aaaaataaataaattacaaa 28929
to top
>gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 173386

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     aaaaataaataaattacaaa 83
              ||||||||||||||||||||
Sbjct: 120191 aaaaataaataaattacaaa 120172
to top
>dbj|AK140607.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930047J17 product:Warning:
            possibly chimeric clone, full insert sequence
          Length = 2192

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 61   ccaaaaaataaataaattacaaacgaca 88
            ||||||||||||||||| ||||| ||||
Sbjct: 2031 ccaaaaaataaataaataacaaaggaca 2058
to top
>gb|AC099332.2| Homo sapiens chromosome 3 clone RP11-256B12, complete sequence
          Length = 164268

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 68273 aaaaaataaataaattacaa 68254
to top
>gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, complete sequence
          Length = 175783

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     aaaaataaataaattacaaa 83
              ||||||||||||||||||||
Sbjct: 105829 aaaaataaataaattacaaa 105848
to top
>gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22, complete sequence
          Length = 123947

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gccaaaaaataaataaatta 79
              ||||||||||||||||||||
Sbjct: 103736 gccaaaaaataaataaatta 103717
to top
>gb|AC024132.7| Homo sapiens BAC clone RP11-415C15 from 4, complete sequence
          Length = 151552

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   aaaaataaataaattacaaa 83
            ||||||||||||||||||||
Sbjct: 7365 aaaaataaataaattacaaa 7346
to top
>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15, complete
              sequence
          Length = 152706

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 116171 aaaaaataaataaattacaa 116152
to top
>gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map 15q22, complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     gttcccgccaaaaaataaataaat 77
              |||||| |||||||||||||||||
Sbjct: 110228 gttccccccaaaaaataaataaat 110251
to top
>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete
             sequence
          Length = 195224

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 54295 aaaaataaataaattacaaa 54314
to top
>emb|BX511232.6| Zebrafish DNA sequence from clone CH211-11K18 in linkage group 3,
              complete sequence
          Length = 171843

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 112203 aaaaaataaataaattacaa 112222
to top
>emb|BX511219.7| Zebrafish DNA sequence from clone DKEYP-93A3, complete sequence
          Length = 201881

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ccgccaaaaaataaataaat 77
             ||||||||||||||||||||
Sbjct: 97700 ccgccaaaaaataaataaat 97719
to top
>emb|BX511005.6| Zebrafish DNA sequence from clone DKEY-72N1 in linkage group 5,
             complete sequence
          Length = 139111

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 73226 aaaaaataaataaattacaa 73207
to top
>emb|BX255947.6| Zebrafish DNA sequence from clone CH211-260D9 in linkage group 19,
            complete sequence
          Length = 147891

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   caaaaaataaataaattaca 81
            ||||||||||||||||||||
Sbjct: 1000 caaaaaataaataaattaca 1019
to top
>gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome 8, complete sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 138100 aaaaaataaataaattacaa 138119
to top
>gb|BC048725.1| Mus musculus, clone IMAGE:6505521, mRNA
          Length = 1251

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 61   ccaaaaaataaataaattacaaacgaca 88
            ||||||||||||||||| ||||| ||||
Sbjct: 1074 ccaaaaaataaataaataacaaaggaca 1101
to top
>emb|BX537347.12| Zebrafish DNA sequence from clone RP71-78P1 in linkage group 4,
             complete sequence
          Length = 197064

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 34332 aaaaaataaataaattacaa 34313
to top
>emb|AL954168.6| Zebrafish DNA sequence from clone DKEY-3I24 in linkage group 17,
             complete sequence
          Length = 205011

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    aaaataaataaattacaaac 84
             ||||||||||||||||||||
Sbjct: 32125 aaaataaataaattacaaac 32106
to top
>emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in linkage group 21,
             complete sequence
          Length = 211643

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaaataaataaattacaaa 83
             ||||||||||||||||||||
Sbjct: 84904 aaaaataaataaattacaaa 84885
to top
>emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chromosome X, complete
            sequence
          Length = 190219

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   aaaaataaataaattacaaa 83
            ||||||||||||||||||||
Sbjct: 6418 aaaaataaataaattacaaa 6399
to top
>emb|AL935117.16| Zebrafish DNA sequence from clone CH211-197G22 in linkage group 18,
              complete sequence
          Length = 213808

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 137840 aaaaaataaataaattacaa 137821
to top
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23
          Length = 77273

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 57552 aaaaaataaataaattacaa 57571
to top
>emb|BX936454.25| Zebrafish DNA sequence from clone DKEY-29M11 in linkage group 20,
              complete sequence
          Length = 225683

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     caaaaaataaataaattaca 81
              ||||||||||||||||||||
Sbjct: 185105 caaaaaataaataaattaca 185124
to top
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8,
              complete sequence
          Length = 169530

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aaaaaataaataaattacaa 82
              ||||||||||||||||||||
Sbjct: 153350 aaaaaataaataaattacaa 153331
to top
>emb|BX510986.8| Zebrafish DNA sequence from clone CH211-173P18 in linkage group 19,
             complete sequence
          Length = 157245

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 68030 aaaaaataaataaattacaa 68049
to top
>emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in linkage group 15,
             complete sequence
          Length = 177681

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aaaaaataaataaattacaa 82
             ||||||||||||||||||||
Sbjct: 34948 aaaaaataaataaattacaa 34967
to top
>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24
          Length = 122529

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ttcccgccaaaaaataaata 74
             ||||||||||||||||||||
Sbjct: 99880 ttcccgccaaaaaataaata 99861
to top
>gb|AE003564.3| Drosophila melanogaster chromosome 3L, section 21 of 83 of the complete
              sequence
          Length = 315944

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     aaaaataaataaattacaaa 83
              ||||||||||||||||||||
Sbjct: 100291 aaaaataaataaattacaaa 100272
to top
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
              sequence
          Length = 315092

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gccaaaaaataaataaatta 79
              ||||||||||||||||||||
Sbjct: 175112 gccaaaaaataaataaatta 175093
to top
>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
            complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aaaaaataaataaattacaa 82
            ||||||||||||||||||||
Sbjct: 9235 aaaaaataaataaattacaa 9254
to top
>emb|AL935281.7| Zebrafish DNA sequence from clone CH211-237G1, complete sequence
          Length = 149939

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   aaaaaataaataaattacaa 82
            ||||||||||||||||||||
Sbjct: 9494 aaaaaataaataaattacaa 9475
to top
>emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chromosome 2, complete
             sequence
          Length = 118787

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 233   ttttgttgggtctggagaaaaagc 256
             ||||||| ||||||||||||||||
Sbjct: 27837 ttttgttaggtctggagaaaaagc 27814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,596
Number of Sequences: 3902068
Number of extensions: 4349596
Number of successful extensions: 265467
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 264882
Number of HSP's gapped (non-prelim): 585
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top