ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35l04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009220.1| Triticum aestivum clone wle1n.pk0074.a9:fis, full... 1001 0.0
2dbj|AK064992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
3dbj|AK063157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-104
4ref|NM_188480.1| Oryza sativa (japonica cultivar-group), predic... 383 e-103
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 268 3e-68
6dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 268 3e-68
7dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 268 3e-68
8dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 44 0.69
9gb|AC104536.2| Homo sapiens chromosome 19 clone LLNLR-308D7, com... 44 0.69
10gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, co... 44 0.69
11gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 44 0.69
12emb|Z46676.2|CEC08B11 Caenorhabditis elegans Cosmid C08B11, comp... 42 2.7
13gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, comple... 42 2.7
14gb|AC157917.4| Mus musculus chromosome 3, clone RP23-120L6, comp... 42 2.7
15gb|AC090333.5| Homo sapiens chromosome 18, clone RP11-843P6, com... 42 2.7
16gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, co... 42 2.7
17gb|AC161601.4| Mus musculus BAC clone RP23-333L19 from chromosom... 42 2.7
18gb|AC018731.5| Homo sapiens BAC clone RP11-52K24 from 2, complet... 42 2.7
19dbj|AP004959.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 2.7

>gb|BT009220.1| Triticum aestivum clone wle1n.pk0074.a9:fis, full insert mRNA
           sequence
          Length = 788

 Score = 1001 bits (505), Expect = 0.0
 Identities = 626/663 (94%), Gaps = 5/663 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aggtgagatt-ttcccggtcctagaatgtatcctgctatcaggttggttagtagcagtgc 62
           |||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 667 aggtgagattattccaagtcctagaacgtatcctgctatcaggttggttagtagcactgc 608

                                                                       
Query: 63  cacaatcttgtcagtcgaactgtaagatcaacctcgccaacagtccagcttcagtttgta 122
           |||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 607 cacaattttgtcagtccagctgtaagatcaacctcgccaacagtccagctccagtttgta 548

                                                                       
Query: 123 agtagtaacaacgaacttatgcacatggaatccttggtagggcatcaatatttaccatag 182
           ||| |||||   |||||  || | |||| ||||||||||||||| |||||||||||||| 
Sbjct: 547 agttgtaacgttgaactcgtggagatgggatccttggtagggcaacaatatttaccataa 488

                                                                       
Query: 183 tgggttaaatgtgggata-gaaaaatgagaaaggggcctaaactggttcgcatgctgaag 241
           |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||   |||
Sbjct: 487 tgggttaaatgtgggataagaatattgaggaaggggcctaaactggttcgcatg---aag 431

                                                                       
Query: 242 ttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttcaactc 301
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 430 ttcttatgaagcaaatggggatgattcttcaattgatttctggtctgtgggctttaactc 371

                                                                       
Query: 302 ccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttgttgtg 361
           ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 370 ccaattacgaaggctgccagttgccgaatcggactttgaaatgtacaaaaccttgttgtg 311

                                                                       
Query: 362 gaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagcttcaat 421
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaacctgtgaagtgtcttccggtgaccgacacttatatatgtaatccctgcagcttcaat 251

                                                                       
Query: 422 ctgactgtatagatgaacctcatttgtatcatctagtgcacttgtggactcgtccagtag 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctgactgtatagatgaacctcatttgtatcatctagtgcacttgtggactcgtccagtag 191

                                                                       
Query: 482 gaccagagttggttttgcgagtaacaaacgagcaaatgcaagacgctgttgctcccctag 541
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 190 gaccagagttggttttgcgagtaacaaccgagcaaatgcaagacgctgttgctcccctag 131

                                                                       
Query: 542 cgaaagaacactggcccaatcatggacagaatccatgccattgaaacgtggcagtatgta 601
            ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 130 ggaaagaacactagcccaatcatggacagaatccatgccattgaaacgtggtaatatgta 71

                                                                       
Query: 602 gcccagcctaacaacctcaagtactctgatcagttcatcagttgagggcatctcaggctt 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  gcccagcctaacaacctcaagtactctgatcagttcatcagttgagggcatctcaggctt 11

              
Query: 662 ggc 664
           |||
Sbjct: 10  ggc 8



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>dbj|AK064992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D15, full
            insert sequence
          Length = 2840

 Score =  394 bits (199), Expect = e-106
 Identities = 460/546 (84%), Gaps = 7/546 (1%)
 Strand = Plus / Minus

                                                                        
Query: 237  tgaagttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttc 296
            |||| |||||||||||| |||| |||||| |||||||| ||  |||| ||||||||||| 
Sbjct: 2418 tgaaattcttatgaagcaaatgaggatgactcttcaatcgacatctgttctgtgggcttt 2359

                                                                        
Query: 297  aactcccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttg 356
            |  | |||||||||  || ||| |   |  || | ||| |||||||||||||| ||||||
Sbjct: 2358 aggtaccaattacgtgggttgctatccgttgaatcggaatttgaaatgtacaagaccttg 2299

                                                                        
Query: 357  ttgtggaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagct 416
            ||||||||| |||| ||||||||||||||||| |  ||||| || |||||||||||||||
Sbjct: 2298 ttgtggaacttgtgcagtgttttccggtgaccaatgcttatgtaagtaatccctgcagct 2239

                                                                        
Query: 417  tcaatctgactgtatagatgaacctcatttgtatcatctagtgcacttgtggactcgtcc 476
            |||||||||||||||||||||  ||||||  ||||||||||||||||||||||||| || 
Sbjct: 2238 tcaatctgactgtatagatgacgctcattcatatcatctagtgcacttgtggactcatca 2179

                                                                        
Query: 477  agtaggaccagagttggttttgcgagtaacaaacgagcaaatgcaagacgctgttgctcc 536
            || ||||| | |||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2178 aggaggactaaagttggttttgcaagtaacaaccgagcaaatgcaagacgctgttgctcc 2119

                                                                        
Query: 537  cctagcgaaagaacactggcccaatcatggacagaatccatgccattgaaacgtggcagt 596
            || || || ||| | |||||||||||||| | ||||||||  ||||||||||| |||| |
Sbjct: 2118 cccagagagagagcgctggcccaatcatgcatagaatccaaaccattgaaacgaggcaat 2059

                                                                        
Query: 597  atgtagcccagcctaacaacctcaagtactctgatcagttcatcagttgagggcatctca 656
            || ||||| | | ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2058 atatagcctaacttaacagcctcaagtactctgatcagttcatcagttgtgggcatctca 1999

                                                                        
Query: 657  ggcttggcaccaactccatctgacatggaggcttcagatagaaaggaaagaggagctttg 716
            | ||||| |||||||||||||||  ||||| ||||      ||||| ||||||  || | 
Sbjct: 1998 gacttggaaccaactccatctgatgtggagacttc------aaaggtaagagggtctgta 1945

                                                                        
Query: 717  ctttgagcatcattagttggtgactgatgtatattttgcagtccatgtaggatagagcaa 776
            ||||||| ||||||| ||| ||| |||   | || || ||||||||||||||||||||||
Sbjct: 1944 ctttgaggatcattatttgatgaatgacaaacatctt-cagtccatgtaggatagagcaa 1886

                  
Query: 777  ttgctg 782
            ||||||
Sbjct: 1885 ttgctg 1880



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>dbj|AK063157.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C09, full
           insert sequence
          Length = 931

 Score =  389 bits (196), Expect = e-104
 Identities = 391/456 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 tgaagttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttc 296
           |||| |||||||||||| |||| |||||| |||||||| ||  |||| ||||||||||| 
Sbjct: 509 tgaaattcttatgaagcaaatgaggatgactcttcaatcgacatctgttctgtgggcttt 450

                                                                       
Query: 297 aactcccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttg 356
           |  | |||||||||  || ||| |   |  || | ||| |||||||||||||| ||||||
Sbjct: 449 aggtaccaattacgtgggttgctatccgttgaatcggaatttgaaatgtacaagaccttg 390

                                                                       
Query: 357 ttgtggaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagct 416
           ||||||||| |||| ||||||||||||||||| |  ||||| || |||||||||||||| 
Sbjct: 389 ttgtggaacttgtgcagtgttttccggtgaccaatgcttatgtaagtaatccctgcagcc 330

                                                                       
Query: 417 tcaatctgactgtatagatgaacctcatttgtatcatctagtgcacttgtggactcgtcc 476
           |||||||||||||||||||||  ||||||  ||||||||||||||||||||||||| || 
Sbjct: 329 tcaatctgactgtatagatgacgctcattcatatcatctagtgcacttgtggactcatca 270

                                                                       
Query: 477 agtaggaccagagttggttttgcgagtaacaaacgagcaaatgcaagacgctgttgctcc 536
           || ||||| | |||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 269 aggaggactaaagttggttttgcaagtaacaaccgagcaaatgcaagacgctgttgctcc 210

                                                                       
Query: 537 cctagcgaaagaacactggcccaatcatggacagaatccatgccattgaaacgtggcagt 596
           || || || ||||| |||||||||||||| | ||||||||  ||||||||||| |||| |
Sbjct: 209 cccagagagagaacgctggcccaatcatgcatagaatccaaaccattgaaacgaggcaat 150

                                                                       
Query: 597 atgtagcccagcctaacaacctcaagtactctgatcagttcatcagttgagggcatctca 656
           || ||||| | | ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 149 atatagcctaacttaacagcctcaagtactctgatcagttcatcagttgtgggcatctca 90

                                               
Query: 657 ggcttggcaccaactccatctgacatggaggcttca 692
           | ||||| |||||||||||||||  ||||| |||||
Sbjct: 89  gacttggaaccaactccatctgatgtggagacttca 54



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>ref|NM_188480.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1545

 Score =  383 bits (193), Expect = e-103
 Identities = 304/341 (89%)
 Strand = Plus / Minus

                                                                        
Query: 336  tttgaaatgtacaaaaccttgttgtggaacctgtgaagtgttttccggtgaccgacactt 395
            |||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |  |||
Sbjct: 1454 tttgaaatgtacaagaccttgttgtggaacttgtgcagtgttttccggtgaccaatgctt 1395

                                                                        
Query: 396  atatatgtaatccctgcagcttcaatctgactgtatagatgaacctcatttgtatcatct 455
            || || ||||||||||||||||||||||||||||||||||||  ||||||  ||||||||
Sbjct: 1394 atgtaagtaatccctgcagcttcaatctgactgtatagatgacgctcattcatatcatct 1335

                                                                        
Query: 456  agtgcacttgtggactcgtccagtaggaccagagttggttttgcgagtaacaaacgagca 515
            ||||||||||||||||| || || ||||| | |||||||||||| |||||||| ||||||
Sbjct: 1334 agtgcacttgtggactcatcaaggaggactaaagttggttttgcaagtaacaaccgagca 1275

                                                                        
Query: 516  aatgcaagacgctgttgctcccctagcgaaagaacactggcccaatcatggacagaatcc 575
            ||||||||||||||||||||||| || || ||||| |||||||||||||| | |||||||
Sbjct: 1274 aatgcaagacgctgttgctcccccagagagagaacgctggcccaatcatgcatagaatcc 1215

                                                                        
Query: 576  atgccattgaaacgtggcagtatgtagcccagcctaacaacctcaagtactctgatcagt 635
            |  ||||||||||| |||| ||| ||||| | | ||||| ||||||||||||||||||||
Sbjct: 1214 aaaccattgaaacgaggcaatatatagcctaacttaacagcctcaagtactctgatcagt 1155

                                                     
Query: 636  tcatcagttgagggcatctcaggcttggcaccaactccatc 676
            |||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 1154 tcatcagttgtgggcatctcagacttggaaccaactccatc 1114



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  268 bits (135), Expect = 3e-68
 Identities = 225/255 (88%)
 Strand = Plus / Plus

                                                                           
Query: 438     acctcatttgtatcatctagtgcacttgtggactcgtccagtaggaccagagttggtttt 497
               ||||||||  ||||||||||||||||||||||||| || || ||||| | ||||||||||
Sbjct: 6500608 acctcattcatatcatctagtgcacttgtggactcatcaaggaggactaaagttggtttt 6500667

                                                                           
Query: 498     gcgagtaacaaacgagcaaatgcaagacgctgttgctcccctagcgaaagaacactggcc 557
               || |||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 6500668 gcaagtaacaaccgagcaaatgcaagacgctgttgctcccccagagagagaacgctggcc 6500727

                                                                           
Query: 558     caatcatggacagaatccatgccattgaaacgtggcagtatgtagcccagcctaacaacc 617
               |||||||| | ||||||||  ||||||||||| |||| ||| ||||| | | ||||| ||
Sbjct: 6500728 caatcatgcatagaatccaaaccattgaaacgaggcaatatatagcctaacttaacagcc 6500787

                                                                           
Query: 618     tcaagtactctgatcagttcatcagttgagggcatctcaggcttggcaccaactccatct 677
               |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 6500788 tcaagtactctgatcagttcatcagttgtgggcatctcagacttggaaccaactccatct 6500847

                              
Query: 678     gacatggaggcttca 692
               ||  ||||| |||||
Sbjct: 6500848 gatgtggagacttca 6500862



 Score =  145 bits (73), Expect = 3e-31
 Identities = 169/201 (84%)
 Strand = Plus / Plus

                                                                           
Query: 237     tgaagttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttc 296
               |||| |||||||||||| |||| |||||| |||||||| ||  |||| ||||||||||| 
Sbjct: 6500131 tgaaattcttatgaagcaaatgaggatgactcttcaatcgacatctgttctgtgggcttt 6500190

                                                                           
Query: 297     aactcccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttg 356
               |  | |||||||||  || ||| |   |  || | ||| |||||||||||||| ||||||
Sbjct: 6500191 aggtaccaattacgtgggttgctatccgttgaatcggaatttgaaatgtacaagaccttg 6500250

                                                                           
Query: 357     ttgtggaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagct 416
               ||||||||| |||| ||||||||||||||||| |  ||||| || |||||||||||||||
Sbjct: 6500251 ttgtggaacttgtgcagtgttttccggtgaccaatgcttatgtaagtaatccctgcagct 6500310

                                    
Query: 417     tcaatctgactgtatagatga 437
               |||||||||||||||||||||
Sbjct: 6500311 tcaatctgactgtatagatga 6500331



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                           
Query: 755     cagtccatgtaggatagagcaattgctg 782
               ||||||||||||||||||||||||||||
Sbjct: 6501536 cagtccatgtaggatagagcaattgctg 6501563



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>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489G09
          Length = 148707

 Score =  268 bits (135), Expect = 3e-68
 Identities = 225/255 (88%)
 Strand = Plus / Plus

                                                                         
Query: 438   acctcatttgtatcatctagtgcacttgtggactcgtccagtaggaccagagttggtttt 497
             ||||||||  ||||||||||||||||||||||||| || || ||||| | ||||||||||
Sbjct: 68088 acctcattcatatcatctagtgcacttgtggactcatcaaggaggactaaagttggtttt 68147

                                                                         
Query: 498   gcgagtaacaaacgagcaaatgcaagacgctgttgctcccctagcgaaagaacactggcc 557
             || |||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 68148 gcaagtaacaaccgagcaaatgcaagacgctgttgctcccccagagagagaacgctggcc 68207

                                                                         
Query: 558   caatcatggacagaatccatgccattgaaacgtggcagtatgtagcccagcctaacaacc 617
             |||||||| | ||||||||  ||||||||||| |||| ||| ||||| | | ||||| ||
Sbjct: 68208 caatcatgcatagaatccaaaccattgaaacgaggcaatatatagcctaacttaacagcc 68267

                                                                         
Query: 618   tcaagtactctgatcagttcatcagttgagggcatctcaggcttggcaccaactccatct 677
             |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 68268 tcaagtactctgatcagttcatcagttgtgggcatctcagacttggaaccaactccatct 68327

                            
Query: 678   gacatggaggcttca 692
             ||  ||||| |||||
Sbjct: 68328 gatgtggagacttca 68342



 Score =  145 bits (73), Expect = 3e-31
 Identities = 169/201 (84%)
 Strand = Plus / Plus

                                                                         
Query: 237   tgaagttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttc 296
             |||| |||||||||||| |||| |||||| |||||||| ||  |||| ||||||||||| 
Sbjct: 67611 tgaaattcttatgaagcaaatgaggatgactcttcaatcgacatctgttctgtgggcttt 67670

                                                                         
Query: 297   aactcccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttg 356
             |  | |||||||||  || ||| |   |  || | ||| |||||||||||||| ||||||
Sbjct: 67671 aggtaccaattacgtgggttgctatccgttgaatcggaatttgaaatgtacaagaccttg 67730

                                                                         
Query: 357   ttgtggaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagct 416
             ||||||||| |||| ||||||||||||||||| |  ||||| || |||||||||||||||
Sbjct: 67731 ttgtggaacttgtgcagtgttttccggtgaccaatgcttatgtaagtaatccctgcagct 67790

                                  
Query: 417   tcaatctgactgtatagatga 437
             |||||||||||||||||||||
Sbjct: 67791 tcaatctgactgtatagatga 67811



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 755   cagtccatgtaggatagagcaattgctg 782
             ||||||||||||||||||||||||||||
Sbjct: 69016 cagtccatgtaggatagagcaattgctg 69043



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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0665D10
          Length = 134967

 Score =  268 bits (135), Expect = 3e-68
 Identities = 225/255 (88%)
 Strand = Plus / Plus

                                                                          
Query: 438    acctcatttgtatcatctagtgcacttgtggactcgtccagtaggaccagagttggtttt 497
              ||||||||  ||||||||||||||||||||||||| || || ||||| | ||||||||||
Sbjct: 123003 acctcattcatatcatctagtgcacttgtggactcatcaaggaggactaaagttggtttt 123062

                                                                          
Query: 498    gcgagtaacaaacgagcaaatgcaagacgctgttgctcccctagcgaaagaacactggcc 557
              || |||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 123063 gcaagtaacaaccgagcaaatgcaagacgctgttgctcccccagagagagaacgctggcc 123122

                                                                          
Query: 558    caatcatggacagaatccatgccattgaaacgtggcagtatgtagcccagcctaacaacc 617
              |||||||| | ||||||||  ||||||||||| |||| ||| ||||| | | ||||| ||
Sbjct: 123123 caatcatgcatagaatccaaaccattgaaacgaggcaatatatagcctaacttaacagcc 123182

                                                                          
Query: 618    tcaagtactctgatcagttcatcagttgagggcatctcaggcttggcaccaactccatct 677
              |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 123183 tcaagtactctgatcagttcatcagttgtgggcatctcagacttggaaccaactccatct 123242

                             
Query: 678    gacatggaggcttca 692
              ||  ||||| |||||
Sbjct: 123243 gatgtggagacttca 123257



 Score =  145 bits (73), Expect = 3e-31
 Identities = 169/201 (84%)
 Strand = Plus / Plus

                                                                          
Query: 237    tgaagttcttatgaagcgaatggggatgattcttcaattgatttctggtctgtgggcttc 296
              |||| |||||||||||| |||| |||||| |||||||| ||  |||| ||||||||||| 
Sbjct: 122526 tgaaattcttatgaagcaaatgaggatgactcttcaatcgacatctgttctgtgggcttt 122585

                                                                          
Query: 297    aactcccaattacgaaggctgccagttgccgagttggactttgaaatgtacaaaaccttg 356
              |  | |||||||||  || ||| |   |  || | ||| |||||||||||||| ||||||
Sbjct: 122586 aggtaccaattacgtgggttgctatccgttgaatcggaatttgaaatgtacaagaccttg 122645

                                                                          
Query: 357    ttgtggaacctgtgaagtgttttccggtgaccgacacttatatatgtaatccctgcagct 416
              ||||||||| |||| ||||||||||||||||| |  ||||| || |||||||||||||||
Sbjct: 122646 ttgtggaacttgtgcagtgttttccggtgaccaatgcttatgtaagtaatccctgcagct 122705

                                   
Query: 417    tcaatctgactgtatagatga 437
              |||||||||||||||||||||
Sbjct: 122706 tcaatctgactgtatagatga 122726



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                          
Query: 755    cagtccatgtaggatagagcaattgctg 782
              ||||||||||||||||||||||||||||
Sbjct: 123931 cagtccatgtaggatagagcaattgctg 123958



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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 378     ttccggtgaccgacacttatat 399
               ||||||||||||||||||||||
Sbjct: 1075526 ttccggtgaccgacacttatat 1075547



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>gb|AC104536.2| Homo sapiens chromosome 19 clone LLNLR-308D7, complete sequence
          Length = 38667

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 261  gatgattcttcaattgatttct 282
            ||||||||||||||||||||||
Sbjct: 4600 gatgattcttcaattgatttct 4621



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>gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, complete sequence
          Length = 200070

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 261    gatgattcttcaattgatttct 282
              ||||||||||||||||||||||
Sbjct: 181097 gatgattcttcaattgatttct 181118



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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    ttccggtgaccgacacttatat 399
              ||||||||||||||||||||||
Sbjct: 545353 ttccggtgaccgacacttatat 545332



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>emb|Z46676.2|CEC08B11 Caenorhabditis elegans Cosmid C08B11, complete sequence
          Length = 26322

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 691   cagatagaaaggaaagaggag 711
             |||||||||||||||||||||
Sbjct: 12084 cagatagaaaggaaagaggag 12104



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>gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, complete sequence
          Length = 176259

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 706   gaggagctttgctttgagcat 726
             |||||||||||||||||||||
Sbjct: 98467 gaggagctttgctttgagcat 98487



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>gb|AC157917.4| Mus musculus chromosome 3, clone RP23-120L6, complete sequence
          Length = 206959

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 706   gaggagctttgctttgagcat 726
             |||||||||||||||||||||
Sbjct: 55054 gaggagctttgctttgagcat 55074



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>gb|AC090333.5| Homo sapiens chromosome 18, clone RP11-843P6, complete sequence
          Length = 165344

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 194   tgggatagaaaaatgagaaaggggc 218
             ||||| |||||||||||||||||||
Sbjct: 93441 tgggagagaaaaatgagaaaggggc 93465



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>gb|AC009854.9| Homo sapiens chromosome 18, clone RP11-333A13, complete sequence
          Length = 207293

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 194   tgggatagaaaaatgagaaaggggc 218
             ||||| |||||||||||||||||||
Sbjct: 25127 tgggagagaaaaatgagaaaggggc 25103



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>gb|AC161601.4| Mus musculus BAC clone RP23-333L19 from chromosome 3, complete sequence
          Length = 200393

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 706    gaggagctttgctttgagcat 726
              |||||||||||||||||||||
Sbjct: 189332 gaggagctttgctttgagcat 189312



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>gb|AC018731.5| Homo sapiens BAC clone RP11-52K24 from 2, complete sequence
          Length = 140174

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   atagaaaaatgagaaaggggc 218
             |||||||||||||||||||||
Sbjct: 79491 atagaaaaatgagaaaggggc 79511



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>dbj|AP004959.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT21I12, TM0136,
             complete sequence
          Length = 81332

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   gggcctaaactggttcgcatg 235
             |||||||||||||||||||||
Sbjct: 77507 gggcctaaactggttcgcatg 77527


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,729,764
Number of Sequences: 3902068
Number of extensions: 6729764
Number of successful extensions: 119446
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119347
Number of HSP's gapped (non-prelim): 96
length of query: 784
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 761
effective length of database: 17,143,297,704
effective search space: 13046049552744
effective search space used: 13046049552744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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