>GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog|
          Length = 917

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +2

Query: 488 FRRTSWSWTLLLDRGRSIQYVVHGIFSQQCLEIL----VHKRYILQAARQTDVSVVNVKR 655
           F+R  WS   LL  G  +Q+  +GIFS + L+ L    +  RYIL A + ++    ++K+
Sbjct: 769 FQRQFWSSVKLL--GNFLQW--YGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIKK 824

Query: 656 DILLGDCFTRFWWI 697
              + +CF + W++
Sbjct: 825 AQNVINCFPKQWFM 838

>GCFC_MOUSE (P58501) GC-rich sequence DNA-binding factor homolog (Fragment)|
          Length = 855

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +2

Query: 488 FRRTSWSWTLLLDRGRSIQYVVHGIFSQQCLEIL----VHKRYILQAARQTDVSVVNVKR 655
           F+R  WS   LL  G  +Q+  +GIFS + L+ L    +  RYIL A + ++    ++++
Sbjct: 707 FQRQFWSSVKLL--GNFLQW--YGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIRK 762

Query: 656 DILLGDCFTRFWWI 697
              + +CF + W++
Sbjct: 763 AQNVINCFPKQWFV 776

>Y1336_AQUAE (O67355) UPF0103 protein aq_1336|
          Length = 374

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 128 GDSFTYLEPLTCSTPFLAVPILLFFCTFVLG 36
           GD F   +P+  S PF+A P LLF  + + G
Sbjct: 14  GDKFVVRDPVGISQPFIATPELLFLLSLMDG 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,581,602
Number of Sequences: 219361
Number of extensions: 1557940
Number of successful extensions: 4196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)