ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35i18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... 32 0.68
2KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2) 31 1.5
3KSR1_HUMAN (Q8IVT5) Kinase suppressor of ras-1 (Kinase suppresso... 31 1.5
4CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 30 2.6
5YNX5_CAEEL (P34578) Hypothetical protein T20G5.5 in chromosome III 30 2.6
6BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 28 7.6
7EPHA5_MOUSE (Q60629) Ephrin type-A receptor 5 precursor (EC 2.7.... 28 7.6
8GUN16_TRIHA (Q8J0I9) Endo-1,6-beta-D-glucanase BGN16.3 precursor... 28 7.6
9EPHA5_RAT (P54757) Ephrin type-A receptor 5 precursor (EC 2.7.10... 28 7.6
10KSR1_MOUSE (Q61097) Kinase suppressor of ras-1 (Kinase suppresso... 28 9.9
11MCRX_METTH (P21110) Methyl-coenzyme M reductase II alpha subunit... 28 9.9

>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 412 VSNIGLQCVEIDQKKRPSIETIVNMLNKLPVSEEVS 305
           ++ + L C+ ID K RP++  IV  + +L + +E S
Sbjct: 325 IAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEAS 360



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>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)|
          Length = 829

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -1

Query: 418 KHVSNIGLQCVEIDQKKRPSIETIVNMLNKLP 323
           K +S+I L C   +Q++RP+   +++ML KLP
Sbjct: 780 KEISDILLFCWAFEQEERPTFTKLMDMLEKLP 811



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>KSR1_HUMAN (Q8IVT5) Kinase suppressor of ras-1 (Kinase suppressor of ras)|
          Length = 921

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 418 KHVSNIGLQCVEIDQKKRPSIETIVNMLNKLP-VSEEVSH 302
           K VS I   C   D ++RPS   +++ML KLP ++  +SH
Sbjct: 848 KEVSEILSACWAFDLQERPSFSLLMDMLEKLPKLNRRLSH 887



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>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 415  HVSNIGLQCVEIDQKKRPSIETIVNMLNKLPVS 317
            HV  I + CVE +   RP++  +V+ML   P S
Sbjct: 941  HVFKIAMMCVEEEAAARPTMREVVHMLTNPPKS 973



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>YNX5_CAEEL (P34578) Hypothetical protein T20G5.5 in chromosome III|
          Length = 1234

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 235  LILFYFMLDISH*KVGSSVLTWNGRPPRSLEAYS 336
            L +F   L +SH  +    LTW+  PP SL+ +S
Sbjct: 1080 LTVFAITLGLSHTSISRLTLTWSKLPPASLKTFS 1113



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
            2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
            (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 403  IGLQCVEIDQKKRPSIETIVNMLNKLPVSEEVSHS 299
            I L+CV+    KRP++  +V  L +L  SE  SHS
Sbjct: 1104 IALRCVDDFPSKRPNMLQVVASLRELRGSENNSHS 1138



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>EPHA5_MOUSE (Q60629) Ephrin type-A receptor 5 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor EHK-1) (EPH homology
           kinase 1) (Brain-specific kinase) (CEK-7)
          Length = 877

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 397 LQCVEIDQKKRPSIETIVNMLNKL 326
           L C + D+  RP  + IVNML+KL
Sbjct: 751 LDCWQKDRNSRPKFDEIVNMLDKL 774



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>GUN16_TRIHA (Q8J0I9) Endo-1,6-beta-D-glucanase BGN16.3 precursor (EC 3.2.1.75)|
           (Beta-1,6-glucanase BGN16.3) (Glucan
           endo-1,6-beta-glucosidase BGN16.3)
          Length = 490

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +2

Query: 182 WIALLNANIWFHHPLS*H*SYFTLCWTSLTKKWEVLCSHGMGDL 313
           W  L N    FH+       Y T CWT  T  W    S  MG L
Sbjct: 320 WTVLTN----FHNSYPNTDQYMTECWTPSTGAWNQAASFTMGPL 359



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>EPHA5_RAT (P54757) Ephrin type-A receptor 5 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor EHK-1) (EPH homology
           kinase 1)
          Length = 1005

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 397 LQCVEIDQKKRPSIETIVNMLNKL 326
           L C + D+  RP  + IVNML+KL
Sbjct: 914 LDCWQKDRNSRPKFDDIVNMLDKL 937



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>KSR1_MOUSE (Q61097) Kinase suppressor of ras-1 (Kinase suppressor of ras)|
           (mKSR1) (Hb protein)
          Length = 873

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 418 KHVSNIGLQCVEIDQKKRPSIETIVNMLNKLP-VSEEVSH 302
           K V  I   C   D ++RPS   +++ML +LP ++  +SH
Sbjct: 800 KEVGEILSACWAFDLQERPSFSLLMDMLERLPKLNRRLSH 839



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>MCRX_METTH (P21110) Methyl-coenzyme M reductase II alpha subunit (EC 2.8.4.1)|
           (Coenzyme-B sulfoethylthiotransferase alpha) (MCR II
           alpha)
          Length = 553

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 407 KYWSTMCGD*SEEETFHRDHCQYAE*ASSERGGLPFH 297
           KY +  C    E+    ++  +YA+ A+ +RGG+PF+
Sbjct: 23  KYTNFYCFGGWEQSARKKEFTEYAKKAAEKRGGIPFY 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,099,053
Number of Sequences: 219361
Number of extensions: 1233034
Number of successful extensions: 2590
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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