Clone Information

BLAST Search Result

Clone Name	rbags35i06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_482488.1\| Oryza sativa (japonica cultivar-group), mRNA	289	6e-75
2	dbj\|AK066491.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	289	6e-75
3	dbj\|AK061889.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
4	gb\|BT016335.1\| Zea mays clone Contig168 mRNA sequence	246	7e-62
5	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	157	5e-35
6	dbj\|AP005734.4\| Oryza sativa (japonica cultivar-group) genomic D...	157	5e-35
7	dbj\|AP003898.3\| Oryza sativa (japonica cultivar-group) genomic D...	157	5e-35
8	gb\|AY112044.1\| Zea mays CL3079_1 mRNA sequence	119	1e-23
9	gb\|AC151762.1\| Ornithorhynchus anatinus chromosome UNK clone OAB...	42	2.2
10	emb\|AJ131517.1\|ATH131517 Arabidopsis thaliana MYB37 homologue ge...	42	2.2
11	dbj\|AB026660.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	2.2
12	dbj\|AP001485.5\| Homo sapiens genomic DNA, chromosome 11 clone:RP...	42	2.2
13	dbj\|AP001930.4\| Homo sapiens genomic DNA, chromosome 11q clone:R...	42	2.2
14	emb\|AL772292.10\| Mouse DNA sequence from clone RP23-109C16 on ch...	42	2.2
15	gb\|AE014843.1\| Plasmodium falciparum 3D7 chromosome 11 section 8...	40	8.6
16	gb\|BC077283.1\| Xenopus laevis F-box protein 7, mRNA (cDNA clone ...	40	8.6
17	gb\|AC153974.9\| Mus musculus 10 BAC RP24-462I5 (Roswell Park Canc...	40	8.6
18	gb\|AC120974.7\| Rattus norvegicus 11 BAC CH230-358O2 (Children's ...	40	8.6
19	gb\|AC120408.7\| Mus musculus chromosome 5, clone RP24-433N14, com...	40	8.6
20	ref\|XM_449815.1\| Candida glabrata CBS138 hypothetical protein (C...	40	8.6
21	gb\|BC091349.1\| Rattus norvegicus transmembrane protein 50B, mRNA...	40	8.6
22	gb\|AC129772.3\| Mus musculus BAC clone RP24-491D10 from chromosom...	40	8.6
23	ref\|NM_001025014.1\| Rattus norvegicus transmembrane protein 50B ...	40	8.6
24	gb\|AC122838.3\| Mus musculus BAC clone RP23-191E1 from 3, complet...	40	8.6
25	gb\|AY386837.1\| Ascaris suum AF17 B mRNA, 3' partial cds; alterna...	40	8.6
26	gb\|AC109213.6\| Mus musculus chromosome 16, clone RP23-345L20, co...	40	8.6
27	gb\|AC157761.6\| Mus musculus chromosome 5, clone RP23-446J15, com...	40	8.6
28	emb\|CR382378.12\| Zebrafish DNA sequence from clone DKEYP-40G12 i...	40	8.6
29	emb\|Z82975.1\|HS36J3 Human DNA sequence from clone RP1-36J3 on ch...	40	8.6
30	emb\|AL359545.12\| Human DNA sequence from clone RP13-42E14 on chr...	40	8.6
31	gb\|AF533892.1\| Mus musculus p63 (Trp63) gene, alternatively spli...	40	8.6
32	ref\|XM_787035.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.6
33	emb\|AL136085.12\| Human DNA sequence from clone RP11-185K11 on ch...	40	8.6
34	emb\|CR380959.1\| Candida glabrata strain CBS138 chromosome M comp...	40	8.6
35	gb\|AC090160.6\| Homo sapiens chromosome 11, clone RP11-413N10, co...	40	8.6
36	gb\|AC100875.3\| Homo sapiens chromosome 11, clone RP11-715M10, co...	40	8.6
37	dbj\|AB220585.1\| Cyprinus carpio csd mRNA for cysteine sulfinate ...	40	8.6
38	gb\|AC153549.5\| Mus musculus 10 BAC RP23-222O23 (Roswell Park Can...	40	8.6
39	gb\|AC007580.6\| Drosophila melanogaster, chromosome 2R, region 50...	40	8.6
40	emb\|BX511000.12\| Zebrafish DNA sequence from clone DKEY-217F4 in...	40	8.6
41	gb\|AC158646.2\| Mus musculus 10 BAC RP23-471J13 (Roswell Park Can...	40	8.6
42	gb\|AC007807.8\|AC007807 Drosophila melanogaster, chromosome 3R, r...	40	8.6
43	emb\|BX321869.7\| Zebrafish DNA sequence from clone CH211-265B24, ...	40	8.6
44	gb\|AY009095.1\| Escherichia coli strain E29101A CS7 fimbria major...	40	8.6
45	gb\|AC007824.5\|AC007824 Drosophila melanogaster, chromosome 3R, r...	40	8.6
46	gb\|AF183182.1\|AF183178S5 Drosophila melanogaster filamin isoform...	40	8.6
47	gb\|AC008067.3\| Homo sapiens BAC clone RP11-303I4 from 2, complet...	40	8.6
48	gb\|AC097458.2\| Homo sapiens BAC clone RP11-10N19 from 2, complet...	40	8.6
49	gb\|AC012150.16\|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell...	40	8.6
50	emb\|AL935025.11\| Zebrafish DNA sequence from clone CH211-160K2 i...	40	8.6
51	dbj\|BS000082.1\| Pan troglodytes chromosome 22 clone:RP43-097H18,...	40	8.6
52	emb\|AL713974.9\| Mouse DNA sequence from clone RP23-135I10 on chr...	40	8.6
53	emb\|AL671889.6\| Mouse DNA sequence from clone RP23-390M19 on chr...	40	8.6
54	emb\|X63411.1\|ECCS5FS E.coli gene for CS5 fimbrial subunit	40	8.6
55	emb\|AJ224079.2\|ECAJ4079 Escherichia coli colonization factor ant...	40	8.6
56	gb\|AC154480.2\| Mus musculus BAC clone RP24-135M1 from 13, comple...	40	8.6
57	emb\|AL844171.13\| Zebrafish DNA sequence from clone DKEY-237G17, ...	40	8.6
58	gb\|AE003813.3\| Drosophila melanogaster chromosome 2R, section 37...	40	8.6
59	gb\|AE003716.5\| Drosophila melanogaster chromosome 3R, section 54...	40	8.6
60	dbj\|AP001685.1\| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	8.6
61	gb\|AC105298.21\| Mus musculus strain C57BL/6J chromosome 5 clone ...	40	8.6
62	gb\|AE017332.1\| Mycoplasma hyopneumoniae 232, complete genome	40	8.6
63	gb\|AC132592.3\| Mus musculus BAC clone RP24-303I6 from 3, complet...	40	8.6
64	dbj\|AP000966.2\| Homo sapiens genomic DNA, chromosome 21q21.1-q21...	40	8.6

>ref|XM_482488.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1999

 Score =  289 bits (146), Expect = 6e-75
 Identities = 300/352 (85%)
 Strand = Plus / Minus

                                                                        
Query: 277  agtctgtagagaatgccccctcgcagtacctgttgctgaatttctcaacagctgtagatg 336
            |||||||||||||||| || || |||||||||||||| || ||||| |  || |||||||
Sbjct: 1663 agtctgtagagaatgctccttcacagtacctgttgctaaacttctcgatggcagtagatg 1604

                                                                        
Query: 337  cgtagagaagtgtttcgccgcccttctctatagccatatagagttcttttcctcgagaaa 396
            | || ||||||||||| ||  |||||||||  |||||||| |||||| ||||||| | ||
Sbjct: 1603 cataaagaagtgtttcaccagccttctctaacgccatataaagttctcttcctcgggtaa 1544

                                                                        
Query: 397  ttttagcaataatccatgcattatttttcgctctgatgcatacttcataatccttgtcat 456
             ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1543 ctttagcaatgacccatgcattatttttggctctgatgcatacttcaaaatccttgtcat 1484

                                                                        
Query: 457  gggtagggtcactcctcttagctcttgacttctcaagatctacttctcctcttagcctgt 516
            |   || ||||  |||||| || ||||||||||| | ||||| |||| ||||||| || |
Sbjct: 1483 gacaagagtcagacctcttggcccttgacttctccaaatctatttcttctcttagtctat 1424

                                                                        
Query: 517  tgagggcaagtagagaatcctttgacagggtgatgactttcccaggtggggaggctcttg 576
            | | || |||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 1423 tcaaggaaagtagagaatcctttgagagggtggtgactttcccaggtggggaggctcttg 1364

                                                                
Query: 577  atacttttctgtttggatcaaagagtatgtancggtntccaccaacatgata 628
            |||||||||| | ||||||||  |||| ||| || | |||||||||||||||
Sbjct: 1363 atacttttctatctggatcaacaagtaagtagcgatatccaccaacatgata 1312

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>dbj|AK066491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L23, full
            insert sequence
          Length = 1999

 Score =  289 bits (146), Expect = 6e-75
 Identities = 300/352 (85%)
 Strand = Plus / Minus

                                                                        
Query: 277  agtctgtagagaatgccccctcgcagtacctgttgctgaatttctcaacagctgtagatg 336
            |||||||||||||||| || || |||||||||||||| || ||||| |  || |||||||
Sbjct: 1663 agtctgtagagaatgctccttcacagtacctgttgctaaacttctcgatggcagtagatg 1604

                                                                        
Query: 337  cgtagagaagtgtttcgccgcccttctctatagccatatagagttcttttcctcgagaaa 396
            | || ||||||||||| ||  |||||||||  |||||||| |||||| ||||||| | ||
Sbjct: 1603 cataaagaagtgtttcaccagccttctctaacgccatataaagttctcttcctcgggtaa 1544

                                                                        
Query: 397  ttttagcaataatccatgcattatttttcgctctgatgcatacttcataatccttgtcat 456
             ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1543 ctttagcaatgacccatgcattatttttggctctgatgcatacttcaaaatccttgtcat 1484

                                                                        
Query: 457  gggtagggtcactcctcttagctcttgacttctcaagatctacttctcctcttagcctgt 516
            |   || ||||  |||||| || ||||||||||| | ||||| |||| ||||||| || |
Sbjct: 1483 gacaagagtcagacctcttggcccttgacttctccaaatctatttcttctcttagtctat 1424

                                                                        
Query: 517  tgagggcaagtagagaatcctttgacagggtgatgactttcccaggtggggaggctcttg 576
            | | || |||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 1423 tcaaggaaagtagagaatcctttgagagggtggtgactttcccaggtggggaggctcttg 1364

                                                                
Query: 577  atacttttctgtttggatcaaagagtatgtancggtntccaccaacatgata 628
            |||||||||| | ||||||||  |||| ||| || | |||||||||||||||
Sbjct: 1363 atacttttctatctggatcaacaagtaagtagcgatatccaccaacatgata 1312

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>dbj|AK061889.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G01, full
            insert sequence
          Length = 1373

 Score =  281 bits (142), Expect = 1e-72
 Identities = 299/352 (84%)
 Strand = Plus / Minus

                                                                        
Query: 277  agtctgtagagaatgccccctcgcagtacctgttgctgaatttctcaacagctgtagatg 336
            |||||||||||||||| || || |||||||||||||| || ||||| |  || |||||||
Sbjct: 1008 agtctgtagagaatgctccttcacagtacctgttgctaaacttctcgatggcagtagatg 949

                                                                        
Query: 337  cgtagagaagtgtttcgccgcccttctctatagccatatagagttcttttcctcgagaaa 396
            | || ||||||||||| ||  |||||||||  |||||||| |||||| ||||||| | ||
Sbjct: 948  cataaagaagtgtttcaccagccttctctaacgccatataaagttctcttcctcgggtaa 889

                                                                        
Query: 397  ttttagcaataatccatgcattatttttcgctctgatgcatacttcataatccttgtcat 456
             ||||||||| | ||||||||||||||| |||||||||||||||||  ||||||||||||
Sbjct: 888  ctttagcaatgacccatgcattatttttggctctgatgcatacttcgaaatccttgtcat 829

                                                                        
Query: 457  gggtagggtcactcctcttagctcttgacttctcaagatctacttctcctcttagcctgt 516
            |   || ||||  |||||| || ||||||||||| | ||||| |||| ||||||| || |
Sbjct: 828  gacaagagtcagacctcttggcccttgacttctccaaatctatttcttctcttagtctat 769

                                                                        
Query: 517  tgagggcaagtagagaatcctttgacagggtgatgactttcccaggtggggaggctcttg 576
            | | || |||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 768  tcaaggaaagtagagaatcctttgagagggtggtgactttcccaggtggggaggctcttg 709

                                                                
Query: 577  atacttttctgtttggatcaaagagtatgtancggtntccaccaacatgata 628
            |||||||||| | ||||||||  |||| ||| || | |||||||||||||||
Sbjct: 708  atacttttctatctggatcaacaagtaagtagcgatatccaccaacatgata 657

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>gb|BT016335.1| Zea mays clone Contig168 mRNA sequence
          Length = 1227

 Score =  246 bits (124), Expect = 7e-62
 Identities = 262/308 (85%)
 Strand = Plus / Minus

                                                                       
Query: 279 tctgtagagaatgccccctcgcagtacctgttgctgaatttctcaacagctgtagatgcg 338
           |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 858 tctgtagagaatgctccctcacagtacctgttgctgaatttctctacagctgtggatgca 799

                                                                       
Query: 339 tagagaagtgtttcgccgcccttctctatagccatatagagttcttttcctcgagaaatt 398
           || ||||| ||||| || ||||||| || |||||| || || ||  ||||| ||   |||
Sbjct: 798 tatagaagcgtttcaccacccttctgtagagccatgtaaagctcccttccttgactgatt 739

                                                                       
Query: 399 ttagcaataatccatgcattatttttcgctctgatgcatacttcataatccttgtcatgg 458
           |||||||||| ||| ||||| ||||| | |||||| ||||||||  ||||||| ||||| 
Sbjct: 738 ttagcaataacccacgcattgttttttgttctgatacatacttcgaaatccttatcatga 679

                                                                       
Query: 459 gtagggtcactcctcttagctcttgacttctcaagatctacttctcctcttagcctgttg 518
             |||||| |  |||||   |||||||||||| ||||||||||||  ||||||| |||||
Sbjct: 678 caagggtcgcctctcttgtatcttgacttctctagatctacttcttgtcttagcatgttg 619

                                                                       
Query: 519 agggcaagtagagaatcctttgacagggtgatgactttcccaggtggggaggctcttgat 578
           ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||
Sbjct: 618 agggcaagtagagaatcctttgctagggtggtgactttcccaggtggggaggctcttgat 559

                   
Query: 579 acttttct 586
           ||| ||||
Sbjct: 558 actcttct 551

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  157 bits (79), Expect = 5e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                            
Query: 303      tacctgttgctgaatttctcaacagctgtagatgcgtagagaagtgtttcgccgcccttc 362
                ||||||||||| || ||||| |  || |||||||| || ||||||||||| ||  |||||
Sbjct: 20549832 tacctgttgctaaacttctcgatggcagtagatgcataaagaagtgtttcaccagccttc 20549773

                                                                            
Query: 363      tctatagccatatagagttcttttcctcgagaaattttagcaataatccatgcattattt 422
                ||||  |||||||| |||||| ||||||| | || ||||||||| | |||||||||||||
Sbjct: 20549772 tctaacgccatataaagttctcttcctcgggtaactttagcaatgacccatgcattattt 20549713

                                                                            
Query: 423      ttcgctctgatgcatacttcataatccttgtcatgggtagggtcactcctcttagctctt 482
                || |||||||||||||||||| |||||||||||||   || ||||  |||||| || |||
Sbjct: 20549712 ttggctctgatgcatacttcaaaatccttgtcatgacaagagtcagacctcttggccctt 20549653

                                                                       
Query: 483      gacttctcaagatctacttctcctcttagcctgttgagggcaagtagagaatcct 537
                |||||||| | ||||| |||| ||||||| || || | || ||||||||||||||
Sbjct: 20549652 gacttctccaaatctatttcttctcttagtctattcaaggaaagtagagaatcct 20549598



 Score =  111 bits (56), Expect = 3e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                            
Query: 535      cctttgacagggtgatgactttcccaggtggggaggctcttgatacttttctgtttggat 594
                ||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 20549315 cctttgagagggtggtgactttcccaggtggggaggctcttgatacttttctatctggat 20549256

                                                  
Query: 595      caaagagtatgtancggtntccaccaacatgata 628
                |||  |||| ||| || | |||||||||||||||
Sbjct: 20549255 caacaagtaagtagcgatatccaccaacatgata 20549222



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 277      agtctgtagagaatgccccctcgcagtacctg 308
                |||||||||||||||| || || |||||||||
Sbjct: 20550276 agtctgtagagaatgctccttcacagtacctg 20550245

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>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0032E15
          Length = 120419

 Score =  157 bits (79), Expect = 5e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                         
Query: 303   tacctgttgctgaatttctcaacagctgtagatgcgtagagaagtgtttcgccgcccttc 362
             ||||||||||| || ||||| |  || |||||||| || ||||||||||| ||  |||||
Sbjct: 53793 tacctgttgctaaacttctcgatggcagtagatgcataaagaagtgtttcaccagccttc 53734

                                                                         
Query: 363   tctatagccatatagagttcttttcctcgagaaattttagcaataatccatgcattattt 422
             ||||  |||||||| |||||| ||||||| | || ||||||||| | |||||||||||||
Sbjct: 53733 tctaacgccatataaagttctcttcctcgggtaactttagcaatgacccatgcattattt 53674

                                                                         
Query: 423   ttcgctctgatgcatacttcataatccttgtcatgggtagggtcactcctcttagctctt 482
             || |||||||||||||||||| |||||||||||||   || ||||  |||||| || |||
Sbjct: 53673 ttggctctgatgcatacttcaaaatccttgtcatgacaagagtcagacctcttggccctt 53614

                                                                    
Query: 483   gacttctcaagatctacttctcctcttagcctgttgagggcaagtagagaatcct 537
             |||||||| | ||||| |||| ||||||| || || | || ||||||||||||||
Sbjct: 53613 gacttctccaaatctatttcttctcttagtctattcaaggaaagtagagaatcct 53559



 Score =  111 bits (56), Expect = 3e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 535   cctttgacagggtgatgactttcccaggtggggaggctcttgatacttttctgtttggat 594
             ||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 53276 cctttgagagggtggtgactttcccaggtggggaggctcttgatacttttctatctggat 53217

                                               
Query: 595   caaagagtatgtancggtntccaccaacatgata 628
             |||  |||| ||| || | |||||||||||||||
Sbjct: 53216 caacaagtaagtagcgatatccaccaacatgata 53183



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 277   agtctgtagagaatgccccctcgcagtacctg 308
             |||||||||||||||| || || |||||||||
Sbjct: 54237 agtctgtagagaatgctccttcacagtacctg 54206

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>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1663_D06
          Length = 139103

 Score =  157 bits (79), Expect = 5e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                         
Query: 303   tacctgttgctgaatttctcaacagctgtagatgcgtagagaagtgtttcgccgcccttc 362
             ||||||||||| || ||||| |  || |||||||| || ||||||||||| ||  |||||
Sbjct: 24204 tacctgttgctaaacttctcgatggcagtagatgcataaagaagtgtttcaccagccttc 24145

                                                                         
Query: 363   tctatagccatatagagttcttttcctcgagaaattttagcaataatccatgcattattt 422
             ||||  |||||||| |||||| ||||||| | || ||||||||| | |||||||||||||
Sbjct: 24144 tctaacgccatataaagttctcttcctcgggtaactttagcaatgacccatgcattattt 24085

                                                                         
Query: 423   ttcgctctgatgcatacttcataatccttgtcatgggtagggtcactcctcttagctctt 482
             || |||||||||||||||||| |||||||||||||   || ||||  |||||| || |||
Sbjct: 24084 ttggctctgatgcatacttcaaaatccttgtcatgacaagagtcagacctcttggccctt 24025

                                                                    
Query: 483   gacttctcaagatctacttctcctcttagcctgttgagggcaagtagagaatcct 537
             |||||||| | ||||| |||| ||||||| || || | || ||||||||||||||
Sbjct: 24024 gacttctccaaatctatttcttctcttagtctattcaaggaaagtagagaatcct 23970



 Score =  111 bits (56), Expect = 3e-21
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 535   cctttgacagggtgatgactttcccaggtggggaggctcttgatacttttctgtttggat 594
             ||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 23687 cctttgagagggtggtgactttcccaggtggggaggctcttgatacttttctatctggat 23628

                                               
Query: 595   caaagagtatgtancggtntccaccaacatgata 628
             |||  |||| ||| || | |||||||||||||||
Sbjct: 23627 caacaagtaagtagcgatatccaccaacatgata 23594



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 277   agtctgtagagaatgccccctcgcagtacctg 308
             |||||||||||||||| || || |||||||||
Sbjct: 24648 agtctgtagagaatgctccttcacagtacctg 24617

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>gb|AY112044.1| Zea mays CL3079_1 mRNA sequence
          Length = 692

 Score =  119 bits (60), Expect = 1e-23
 Identities = 210/262 (80%)
 Strand = Plus / Plus

                                                                       
Query: 279 tctgtagagaatgccccctcgcagtacctgttgctgaatttctcaacagctgtagatgcg 338
           |||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||| 
Sbjct: 347 tctgtagagaatgctccctcacagtacctgttgctgaatttctctacagctggggatgca 406

                                                                       
Query: 339 tagagaagtgtttcgccgcccttctctatagccatatagagttcttttcctcgagaaatt 398
           || ||||| ||||| || |||||||||| |||||| || || ||  ||||| ||   |||
Sbjct: 407 tatagaagcgtttcaccacccttctctagagccatgtaaagctcccttccttgactgatt 466

                                                                       
Query: 399 ttagcaataatccatgcattatttttcgctctgatgcatacttcataatccttgtcatgg 458
           |||||||||| ||| |||||       | |||||| ||||||||  ||||||| ||||| 
Sbjct: 467 ttagcaataacccacgcattgnnnnnngttctgatacatacttcgaaatccttatcatga 526

                                                                       
Query: 459 gtagggtcactcctcttagctcttgacttctcaagatctacttctcctcttagcctgttg 518
             |||||| |  |||||   |||||||||||| ||||||||||||   |||||| || ||
Sbjct: 527 caagggtcgcctctcttgtatcttgacttctctagatctacttcttgccttagcatggtg 586

                                 
Query: 519 agggcaagtagagaatcctttg 540
           |||||||| ||| || ||||||
Sbjct: 587 agggcaagaagaaaaccctttg 608

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>gb|AC151762.1| Ornithorhynchus anatinus chromosome UNK clone OABb-451A1, complete
             sequence
          Length = 160077

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 121   gcattatttttattccaaagggcat 145
             ||||||||||| |||||||||||||
Sbjct: 88956 gcattattttttttccaaagggcat 88932

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>emb|AJ131517.1|ATH131517 Arabidopsis thaliana MYB37 homologue gene and ORF1
          Length = 19132

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 32   agaaatgagttgttgttttcc 52
            |||||||||||||||||||||
Sbjct: 2857 agaaatgagttgttgttttcc 2877

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>dbj|AB026660.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T20O7
          Length = 18446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 32   agaaatgagttgttgttttcc 52
            |||||||||||||||||||||
Sbjct: 2249 agaaatgagttgttgttttcc 2269

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>dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-681H10, complete
              sequence
          Length = 158577

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 124    ttatttttattccaaagggca 144
              |||||||||||||||||||||
Sbjct: 144863 ttatttttattccaaagggca 144843

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>dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-669L23, complete
             sequences
          Length = 167117

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   ttatttttattccaaagggca 144
             |||||||||||||||||||||
Sbjct: 15903 ttatttttattccaaagggca 15883

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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
              sequence
          Length = 201671

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     tgttgttttccaaaaaacata 62
              |||||||||||||||||||||
Sbjct: 117715 tgttgttttccaaaaaacata 117695

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>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
             sequence
          Length = 271546

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaaatagaaatgagcatgtt 81
             ||||||||||||||||||||
Sbjct: 47126 aaaatagaaatgagcatgtt 47145

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>gb|BC077283.1| Xenopus laevis F-box protein 7, mRNA (cDNA clone MGC:80085
            IMAGE:4930573), complete cds
          Length = 2160

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   aaaacataaaatagaaatga 74
            ||||||||||||||||||||
Sbjct: 1930 aaaacataaaatagaaatga 1949

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>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162977

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    cttttctgtttggatcaaag 599
              ||||||||||||||||||||
Sbjct: 101893 cttttctgtttggatcaaag 101912

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>gb|AC120974.7| Rattus norvegicus 11 BAC CH230-358O2 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 198650

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tagaaatgagttgttgtttt 50
              ||||||||||||||||||||
Sbjct: 126818 tagaaatgagttgttgtttt 126799

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>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence
          Length = 178077

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   ggctcttgatacttttctgt 588
             ||||||||||||||||||||
Sbjct: 53191 ggctcttgatacttttctgt 53172

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>ref|XM_449815.1| Candida glabrata CBS138 hypothetical protein (CAGL0M10769g) partial
            mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  cccaggtggggaggctcttg 576
            ||||||||||||||||||||
Sbjct: 1194 cccaggtggggaggctcttg 1213

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>gb|BC091349.1| Rattus norvegicus transmembrane protein 50B, mRNA (cDNA clone
            MGC:109374 IMAGE:7316764), complete cds
          Length = 2289

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   tagaaatgagttgttgtttt 50
            ||||||||||||||||||||
Sbjct: 1058 tagaaatgagttgttgtttt 1077

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>gb|AC129772.3| Mus musculus BAC clone RP24-491D10 from chromosome 10, complete
             sequence
          Length = 160317

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aaaaaacataaaatagaaat 72
             ||||||||||||||||||||
Sbjct: 36644 aaaaaacataaaatagaaat 36625

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>ref|NM_001025014.1| Rattus norvegicus transmembrane protein 50B (Tmem50b), mRNA
          Length = 2289

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   tagaaatgagttgttgtttt 50
            ||||||||||||||||||||
Sbjct: 1058 tagaaatgagttgttgtttt 1077

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>gb|AC122838.3| Mus musculus BAC clone RP23-191E1 from 3, complete sequence
          Length = 196023

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ttgttgttttccaaaaaaca 60
             ||||||||||||||||||||
Sbjct: 19437 ttgttgttttccaaaaaaca 19418

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>gb|AY386837.1| Ascaris suum AF17 B mRNA, 3' partial cds; alternatively spliced
          Length = 738

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  aaaatagaaatgagcatgtt 81
           ||||||||||||||||||||
Sbjct: 518 aaaatagaaatgagcatgtt 537

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>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence
          Length = 244558

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   cttctcctcttagcctgttg 518
             ||||||||||||||||||||
Sbjct: 45534 cttctcctcttagcctgttg 45515

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>gb|AC157761.6| Mus musculus chromosome 5, clone RP23-446J15, complete sequence
          Length = 177868

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 569   ggctcttgatacttttctgt 588
             ||||||||||||||||||||
Sbjct: 71281 ggctcttgatacttttctgt 71300

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>emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 in linkage group 7,
             complete sequence
          Length = 198471

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   ttgctgaatttctcaacagctgta 332
             ||||||||||| ||||||||||||
Sbjct: 22612 ttgctgaatttttcaacagctgta 22589

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>emb|Z82975.1|HS36J3 Human DNA sequence from clone RP1-36J3 on chromosome X Contains a CpG
             island, complete sequence
          Length = 105580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    caaaaaacataaaatagaaa 71
             ||||||||||||||||||||
Sbjct: 19072 caaaaaacataaaatagaaa 19053

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>emb|AL359545.12| Human DNA sequence from clone RP13-42E14 on chromosome Xq13.1-13.3
             Contains the 3' end of the ABCB7 gene for ATP-binding
             cassette sub-family B (MDR/TAP) member 7, complete
             sequence
          Length = 127243

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 54    aaaaacataaaatagaaatgagcatgtt 81
             |||||||||||||| |||||| ||||||
Sbjct: 95959 aaaaacataaaataaaaatgaccatgtt 95986

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>gb|AF533892.1| Mus musculus p63 (Trp63) gene, alternatively spliced, complete cds
          Length = 208158

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    cttctcctcttagcctgttg 518
              ||||||||||||||||||||
Sbjct: 172889 cttctcctcttagcctgttg 172870

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>ref|XM_787035.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA repair
            protein RAD50 (mRad50) (LOC587300), mRNA
          Length = 3747

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  aggtaagggagtgatccagt 227
            ||||||||||||||||||||
Sbjct: 2462 aggtaagggagtgatccagt 2443

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>emb|AL136085.12| Human DNA sequence from clone RP11-185K11 on chromosome 10 Contains
             part of the NRG3 gene for neuregulin 3, complete sequence
          Length = 48760

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 588   tttggatcaaagagtatgta 607
             ||||||||||||||||||||
Sbjct: 38701 tttggatcaaagagtatgta 38720

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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 557     cccaggtggggaggctcttg 576
               ||||||||||||||||||||
Sbjct: 1075240 cccaggtggggaggctcttg 1075259

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>gb|AC090160.6| Homo sapiens chromosome 11, clone RP11-413N10, complete sequence
          Length = 170008

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tctgtagagaatgccccctc 298
              ||||||||||||||||||||
Sbjct: 166372 tctgtagagaatgccccctc 166391

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>gb|AC100875.3| Homo sapiens chromosome 11, clone RP11-715M10, complete sequence
          Length = 195097

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tctgtagagaatgccccctc 298
             ||||||||||||||||||||
Sbjct: 78913 tctgtagagaatgccccctc 78894

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>dbj|AB220585.1| Cyprinus carpio csd mRNA for cysteine sulfinate decarboxylase,
           complete cds
          Length = 2567

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  tgttttccaaaaaacataaa 64
           ||||||||||||||||||||
Sbjct: 944 tgttttccaaaaaacataaa 963

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>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    cttttctgtttggatcaaag 599
              ||||||||||||||||||||
Sbjct: 202053 cttttctgtttggatcaaag 202034

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>gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone
             BACR07P02, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aaaaaacataaaatagaaatgagc 76
             |||||||| |||||||||||||||
Sbjct: 87208 aaaaaacaaaaaatagaaatgagc 87231

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>emb|BX511000.12| Zebrafish DNA sequence from clone DKEY-217F4 in linkage group 2,
             complete sequence
          Length = 191671

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    caaaaaacataaaatagaaa 71
             ||||||||||||||||||||
Sbjct: 61888 caaaaaacataaaatagaaa 61907

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>gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 167591

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     aaaaaacataaaatagaaat 72
              ||||||||||||||||||||
Sbjct: 138414 aaaaaacataaaatagaaat 138395

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>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone
             BACR01E04, complete sequence
          Length = 172674

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   gttcttttcctcgagaaatt 398
             ||||||||||||||||||||
Sbjct: 80457 gttcttttcctcgagaaatt 80476

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>emb|BX321869.7| Zebrafish DNA sequence from clone CH211-265B24, complete sequence
          Length = 146012

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   ttgctgaatttctcaacagctgta 332
             ||||||||||| ||||||||||||
Sbjct: 52207 ttgctgaatttttcaacagctgta 52184

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>gb|AY009095.1| Escherichia coli strain E29101A CS7 fimbria major subunit CsvA
           precursor (csvA) gene, complete cds; and YaaA precursor
           (yaaA) gene, partial cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 tctgcattatttttattccaaagg 141
           |||||||||||||||| |||||||
Sbjct: 756 tctgcattatttttataccaaagg 779

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>gb|AC007824.5|AC007824 Drosophila melanogaster, chromosome 3R, region 89E-90A, BAC clone
             BACR02L16, complete sequence
          Length = 190866

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   gttcttttcctcgagaaatt 398
             ||||||||||||||||||||
Sbjct: 20987 gttcttttcctcgagaaatt 21006

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>gb|AF183182.1|AF183178S5 Drosophila melanogaster filamin isoforms A and B (Filamin) gene,
           exons 13 through 17, alternatively spliced, complete cds
          Length = 4514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 gttcttttcctcgagaaatt 398
           ||||||||||||||||||||
Sbjct: 665 gttcttttcctcgagaaatt 646

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>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence
          Length = 151242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    aaaaaacataaaatagaaat 72
             ||||||||||||||||||||
Sbjct: 96365 aaaaaacataaaatagaaat 96384

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>gb|AC097458.2| Homo sapiens BAC clone RP11-10N19 from 2, complete sequence
          Length = 104229

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 54    aaaaacataaaatagaaatgagcatgtt 81
             ||||| |||||||| |||||||||||||
Sbjct: 88929 aaaaaaataaaataaaaatgagcatgtt 88956

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>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 227305

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aaacataaaatagaaatgag 75
              ||||||||||||||||||||
Sbjct: 224451 aaacataaaatagaaatgag 224470

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>emb|AL935025.11| Zebrafish DNA sequence from clone CH211-160K2 in linkage group 16,
              complete sequence
          Length = 147313

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    cctgctctgcattattttta 132
              ||||||||||||||||||||
Sbjct: 117011 cctgctctgcattattttta 116992

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>dbj|BS000082.1| Pan troglodytes chromosome 22 clone:RP43-097H18, map 22, complete
             sequences
          Length = 176268

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ataaaatagaaatgagcatg 79
             ||||||||||||||||||||
Sbjct: 16300 ataaaatagaaatgagcatg 16281

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>emb|AL713974.9| Mouse DNA sequence from clone RP23-135I10 on chromosome X, complete
              sequence
          Length = 191603

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     tccaaaaaacataaaatagaaatg 73
              |||||||||||||||| |||||||
Sbjct: 173886 tccaaaaaacataaaaaagaaatg 173909

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>emb|AL671889.6| Mouse DNA sequence from clone RP23-390M19 on chromosome X, complete
              sequence
          Length = 195748

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 485    cttctcaagatctacttctcctct 508
              |||| |||||||||||||||||||
Sbjct: 112697 cttcccaagatctacttctcctct 112674

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>emb|X63411.1|ECCS5FS E.coli gene for CS5 fimbrial subunit
          Length = 948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 tctgcattatttttattccaaagg 141
           |||||||||||||||| |||||||
Sbjct: 663 tctgcattatttttataccaaagg 686

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>emb|AJ224079.2|ECAJ4079 Escherichia coli colonization factor antigen CFA/IV (PCF8775), CS5
            fimbrial region: complete cds
          Length = 9935

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 118  tctgcattatttttattccaaagg 141
            |||||||||||||||| |||||||
Sbjct: 2039 tctgcattatttttataccaaagg 2062

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>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence
          Length = 171846

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   tcctgctctgcattatttttattc 135
             |||||||||| |||||||||||||
Sbjct: 52300 tcctgctctgaattatttttattc 52323

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>emb|AL844171.13| Zebrafish DNA sequence from clone DKEY-237G17, complete sequence
          Length = 172321

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   cctgctctgcattattttta 132
             ||||||||||||||||||||
Sbjct: 33551 cctgctctgcattattttta 33532

to top

>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
             sequence
          Length = 266851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aaaaaacataaaatagaaatgagc 76
             |||||||| |||||||||||||||
Sbjct: 57220 aaaaaacaaaaaatagaaatgagc 57243

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>gb|AE003716.5| Drosophila melanogaster chromosome 3R, section 54 of 118 of the
             complete sequence
          Length = 220035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   gttcttttcctcgagaaatt 398
             ||||||||||||||||||||
Sbjct: 67032 gttcttttcctcgagaaatt 67051

to top

>dbj|AP001685.1| Homo sapiens genomic DNA, chromosome 21q, section 29/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     ataaaatagaaatgagcatg 79
              ||||||||||||||||||||
Sbjct: 156205 ataaaatagaaatgagcatg 156186

to top

>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete
              sequence
          Length = 258789

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    ggctcttgatacttttctgt 588
              ||||||||||||||||||||
Sbjct: 257038 ggctcttgatacttttctgt 257057

to top

>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tccaaaaaacataaaataga 69
              ||||||||||||||||||||
Sbjct: 660039 tccaaaaaacataaaataga 660020

to top

>gb|AC132592.3| Mus musculus BAC clone RP24-303I6 from 3, complete sequence
          Length = 174752

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgttgttttccaaaaaaca 60
             ||||||||||||||||||||
Sbjct: 84733 ttgttgttttccaaaaaaca 84752

to top

>dbj|AP000966.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B876D15,
             LL56-APP region, complete sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ataaaatagaaatgagcatg 79
             ||||||||||||||||||||
Sbjct: 20577 ataaaatagaaatgagcatg 20558


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,430,560
Number of Sequences: 3902068
Number of extensions: 6430560
Number of successful extensions: 126363
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126148
Number of HSP's gapped (non-prelim): 206
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result