ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35h11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC098735.4| Mus musculus BAC clone RP23-121P5 from 16, complete sequence Length = 189844 Score = 42.1 bits (21), Expect = 0.48 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gtgaagcaagcaagacaaaag 97 ||||||||||||||||||||| Sbjct: 170218 gtgaagcaagcaagacaaaag 170198
>gb|AC134900.5| Mus musculus BAC clone RP23-249B22 from 10, complete sequence Length = 213095 Score = 42.1 bits (21), Expect = 0.48 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 aagcaagacaaaagacaccgt 104 ||||||||||||||||||||| Sbjct: 85887 aagcaagacaaaagacaccgt 85867
>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence Length = 155999 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tgaagcaagcaagacaaaag 97 |||||||||||||||||||| Sbjct: 115319 tgaagcaagcaagacaaaag 115300
>gb|AC109200.13| Mus musculus chromosome 8, clone RP23-26G21, complete sequence Length = 162734 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 83134 gcaagacaaaagacaccgt 83152
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 150981 gcaagacaaaagacaccgt 150999
>gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, complete sequence Length = 185237 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 88209 gcaagacaaaagacaccgt 88191
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 185710 gcaagacaaaagacaccgt 185692
>gb|AC102414.8| Mus musculus chromosome 15, clone RP24-474D5, complete sequence Length = 159739 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 143626 gcaagacaaaagacaccgt 143608
>gb|AC165144.2| Mus musculus BAC clone RP24-441D9 from chromosome 14, complete sequence Length = 153364 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 10344 gcaagacaaaagacaccgt 10362
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 60334 gcaagacaaaagacaccgt 60352
>gb|AC153633.10| Mus musculus 6 BAC RP23-13K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216841 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 81221 gcaagacaaaagacaccgt 81203
>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence Length = 170041 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 60176 gcaagacaaaagacaccgt 60158
>gb|AC134426.20| Mus musculus chromosome 1, clone RP24-342A12, complete sequence Length = 196208 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 125751 gcaagacaaaagacaccgt 125769
>gb|AE008496.1| Streptococcus pneumoniae R6 section 112 of 184 of the complete genome Length = 10471 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 agcaagcaagacaaaagac 99 ||||||||||||||||||| Sbjct: 235 agcaagcaagacaaaagac 217
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence Length = 203838 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 197475 gcaagacaaaagacaccgt 197493
>gb|AC111116.13| Mus musculus chromosome 16, clone RP23-214I13, complete sequence Length = 173839 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 124069 gcaagacaaaagacaccgt 124051
>gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, complete sequence Length = 184088 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 38381 gcaagacaaaagacaccgt 38363
>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence Length = 192261 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 18421 gcaagacaaaagacaccgt 18439
>gb|AC147993.3| Mus musculus BAC clone RP24-343P7 from chromosome 9, complete sequence Length = 145230 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 63945 gcaagacaaaagacaccgt 63927
>gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, complete sequence Length = 160709 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 27181 gcaagacaaaagacaccgt 27199
>gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosome 12, complete sequence Length = 177652 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 22119 gcaagacaaaagacaccgt 22101
>gb|AC135108.3| Mus musculus BAC clone RP24-538P2 from chromosome 9, complete sequence Length = 137981 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aagcaagacaaaagacacc 102 ||||||||||||||||||| Sbjct: 48525 aagcaagacaaaagacacc 48507
>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence Length = 215151 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 127078 gcaagacaaaagacaccgt 127060
>gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosome 15, complete sequence Length = 205639 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 32145 gcaagacaaaagacaccgt 32163
>gb|AC165287.2| Mus musculus BAC clone RP24-230H12 from chromosome 14, complete sequence Length = 161004 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 65847 gcaagacaaaagacaccgt 65865
>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence Length = 186062 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 37181 gcaagacaaaagacaccgt 37199
>gb|AC139054.17| Mus musculus chromosome 15, clone RP23-14D20, complete sequence Length = 207292 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 158345 gcaagacaaaagacaccgt 158327
>gb|AC130540.4| Mus musculus BAC clone RP23-474I3 from chromosome 14, complete sequence Length = 201412 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 138505 gcaagacaaaagacaccgt 138487
>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete sequence Length = 166990 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 124552 gcaagacaaaagacaccgt 124534
>emb|CT010456.8| Mouse DNA sequence from clone RP23-96D14 on chromosome 12, complete sequence Length = 217223 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 36320 gcaagacaaaagacaccgt 36338
>emb|AL669916.7| Mouse DNA sequence from clone RP23-308N3 on chromosome 11, complete sequence Length = 123478 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 10187 gcaagacaaaagacaccgt 10169
>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence Length = 197050 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 tccatcaaccacagctgtg 30 ||||||||||||||||||| Sbjct: 27106 tccatcaaccacagctgtg 27088
>gb|AC130212.4| Mus musculus BAC clone RP23-461L3 from chromosome 15, complete sequence Length = 170741 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 96948 gcaagacaaaagacaccgt 96930
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 78705 gcaagacaaaagacaccgt 78687
>gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome 12, complete sequence Length = 190631 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 59934 gcaagacaaaagacaccgt 59952
>gb|AC122239.4| Mus musculus BAC clone RP23-143K14 from chromosome 8, complete sequence Length = 197109 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 173271 gcaagacaaaagacaccgt 173253
>gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosome 10, complete sequence Length = 154482 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 13215 gcaagacaaaagacaccgt 13233
>gb|AC124349.4| Mus musculus BAC clone RP24-463G19 from chromosome 12, complete sequence Length = 122944 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 74710 gcaagacaaaagacaccgt 74692 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 32099 gcaagacaaaagacaccgt 32117
>gb|AC122047.4| Mus musculus BAC clone RP24-456A9 from chromosome 2, complete sequence Length = 172110 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 aaccacagctgtgcttctg 36 ||||||||||||||||||| Sbjct: 81027 aaccacagctgtgcttctg 81045
>gb|AC127230.4| Mus musculus BAC clone RP24-553G19 from chromosome 14, complete sequence Length = 160625 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 32090 gcaagacaaaagacaccgt 32108
>gb|AC131729.3| Mus musculus BAC clone RP23-125B15 from 5, complete sequence Length = 209715 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 97467 gcaagacaaaagacaccgt 97485
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence Length = 193725 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 67467 gcaagacaaaagacaccgt 67449
>emb|CR974441.3| Mouse DNA sequence from clone RP23-271P7 on chromosome X, complete sequence Length = 199381 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 114848 gcaagacaaaagacaccgt 114866
>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence Length = 185938 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 44889 gcaagacaaaagacaccgt 44871 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 26248 gcaagacaaaagacaccgt 26230
>gb|AC102613.7| Mus musculus chromosome 1, clone RP23-418C16, complete sequence Length = 201275 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 20047 gcaagacaaaagacaccgt 20029
>gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, complete sequence Length = 168622 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 154090 gcaagacaaaagacaccgt 154072
>gb|AC166080.2| Mus musculus BAC clone RP23-3N5 from chromosome 14, complete sequence Length = 198220 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 163052 gcaagacaaaagacaccgt 163070
>emb|BX324174.5| Mouse DNA sequence from clone RP23-110D11 on chromosome X, complete sequence Length = 215075 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 63891 gcaagacaaaagacaccgt 63909
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 101908 gcaagacaaaagacaccgt 101926
>gb|AC162861.2| Mus musculus chromosome 1, clone RP23-236B21, complete sequence Length = 151717 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 90333 gcaagacaaaagacaccgt 90351
>gb|AC073553.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-270B12, complete sequence Length = 187523 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 118374 gcaagacaaaagacaccgt 118392
>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence Length = 200738 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 69554 gcaagacaaaagacaccgt 69572
>emb|AL627237.44| Mouse DNA sequence from clone RP23-269N23 on chromosome 11 Contains the gene for a novel protein similar to T-cell specific GTPase (Tgtp), two novel genes, the gene for a novel protein similar to proteasome (prosome, macropain) 28 subunit beta (Psme2), a poly(rC) binding protein 2 (Pcbp2) pseudogene and a novel genes, complete sequence Length = 89400 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 87225 gcaagacaaaagacaccgt 87243 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 15387 gcaagacaaaagacaccgt 15405
>emb|CR938728.5| Mouse DNA sequence from clone RP23-352D3 on chromosome X, complete sequence Length = 193559 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 62282 gcaagacaaaagacaccgt 62264
>emb|CR938726.3| Mouse DNA sequence from clone RP23-28J9 on chromosome X, complete sequence Length = 239405 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 185641 gcaagacaaaagacaccgt 185623
>emb|CR936341.4| Mouse DNA sequence from clone RP24-357L11 on chromosome X, complete sequence Length = 71804 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 50822 gcaagacaaaagacaccgt 50840
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 70445 gcaagacaaaagacaccgt 70463
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 167469 gcaagacaaaagacaccgt 167487
>emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chromosome X, complete sequence Length = 167868 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 131242 gcaagacaaaagacaccgt 131224
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 97795 gcaagacaaaagacaccgt 97777
>emb|AL929553.6| Mouse DNA sequence from clone RP24-316B1 on chromosome 4 Contains the 5' end of a variant of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 163370 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 135183 gcaagacaaaagacaccgt 135165
>emb|AL805943.6| Mouse DNA sequence from clone RP23-86O13 on chromosome 4 Contains a opsin 1 (cone pigments) (Opn1) pseudogene, complete sequence Length = 192561 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 126250 gcaagacaaaagacaccgt 126232
>emb|CR555303.7| Mouse DNA sequence from clone RP24-322L1 on chromosome X, complete sequence Length = 135280 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 65149 gcaagacaaaagacaccgt 65167
>gb|AC153013.3| Mus musculus BAC clone RP23-273N8 from chromosome 8, complete sequence Length = 196609 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 75927 gcaagacaaaagacaccgt 75909
>emb|CR589930.7| Mouse DNA sequence from clone RP23-224F19 on chromosome X, complete sequence Length = 79313 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 41299 gcaagacaaaagacaccgt 41281
>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence Length = 203628 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 106947 gcaagacaaaagacaccgt 106965
>emb|CR556711.3| Mouse DNA sequence from clone RP23-415J12 on chromosome X, complete sequence Length = 195389 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 162145 gcaagacaaaagacaccgt 162163
>emb|CR556703.5| Mouse DNA sequence from clone RP23-113H12 on chromosome X, complete sequence Length = 215182 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 210071 gcaagacaaaagacaccgt 210089
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 126210 gcaagacaaaagacaccgt 126228
>emb|CR524822.2| Mouse DNA sequence from clone WI1-1536G2 on chromosome X, complete sequence Length = 40056 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 21072 gcaagacaaaagacaccgt 21090
>emb|BX855608.7| Mouse DNA sequence from clone RP23-79C10 on chromosome X, complete sequence Length = 186950 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 158951 gcaagacaaaagacaccgt 158969
>gb|AC159982.4| Mus musculus chromosome 19, clone RP24-383P9, complete sequence Length = 198886 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 133113 gcaagacaaaagacaccgt 133095
>emb|BX294192.12| Mouse DNA sequence from clone RP23-98M14 on chromosome X, complete sequence Length = 211404 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 190389 gcaagacaaaagacaccgt 190407
>gb|AC159251.2| Mus musculus BAC clone RP24-113B8 from chromosome 12, complete sequence Length = 200896 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 181517 gcaagacaaaagacaccgt 181499 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 138909 gcaagacaaaagacaccgt 138927
>gb|AC140343.4| Mus musculus BAC clone RP24-263C12 from chromosome unknown, complete sequence Length = 159355 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 136075 gcaagacaaaagacaccgt 136057
>gb|AC152074.3| Mus musculus BAC clone RP24-549B12 from chromosome 7, complete sequence Length = 211098 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 78902 gcaagacaaaagacaccgt 78920
>emb|BX322626.9| Mouse DNA sequence from clone RP23-269P17 on chromosome X, complete sequence Length = 146807 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 5141 gcaagacaaaagacaccgt 5123
>emb|BX465214.7| Mouse DNA sequence from clone RP24-89M24 on chromosome X, complete sequence Length = 251075 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 25248 gcaagacaaaagacaccgt 25230
>emb|AL845281.5| Mouse DNA sequence from clone RP23-476B1 on chromosome 2, complete sequence Length = 195228 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 127024 gcaagacaaaagacaccgt 127006
>emb|BX901960.4| Mouse DNA sequence from clone RP24-116B15 on chromosome X, complete sequence Length = 185687 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 163163 gcaagacaaaagacaccgt 163145
>gb|AC159461.1| Mus musculus BAC clone RP23-273I10 from chromosome 13, complete sequence Length = 152402 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 44012 gcaagacaaaagacaccgt 43994
>gb|AC154539.3| Mus musculus BAC clone RP23-452F20 from chromosome 13, complete sequence Length = 176106 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 28312 gcaagacaaaagacaccgt 28294
>gb|AC156022.2| Mus musculus BAC clone RP23-201E13 from chromosome 5, complete sequence Length = 225445 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 19203 gcaagacaaaagacaccgt 19185
>emb|BX890588.3| Mouse DNA sequence from clone RP23-88C4 on chromosome X, complete sequence Length = 239548 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 207093 gcaagacaaaagacaccgt 207075
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 agcaagcaagacaaaagac 99 ||||||||||||||||||| Sbjct: 1306486 agcaagcaagacaaaagac 1306468
>gb|AC133512.5| Mus musculus BAC clone RP23-205B19 from chromosome unknown, complete sequence Length = 187276 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 11781 gcaagacaaaagacaccgt 11799
>emb|BX571729.9| Mouse DNA sequence from clone RP23-187P8 on chromosome X, complete sequence Length = 241971 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 146128 gcaagacaaaagacaccgt 146146
>emb|BX465222.9| Mouse DNA sequence from clone RP24-73A23 on chromosome X, complete sequence Length = 207803 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 90202 gcaagacaaaagacaccgt 90184
>emb|BX842675.2| Mouse DNA sequence from clone RP24-406D18 on chromosome X, complete sequence Length = 183602 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 96711 gcaagacaaaagacaccgt 96693
>emb|BX679662.5| Mouse DNA sequence from clone RP23-364B23 on chromosome 2, complete sequence Length = 59823 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 2176 gcaagacaaaagacaccgt 2158
>emb|AL772281.7| Mouse DNA sequence from clone RP23-138O20 on chromosome 4, complete sequence Length = 58409 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 29931 gcaagacaaaagacaccgt 29949
>emb|AL808014.8| Mouse DNA sequence from clone RP23-142A6 on chromosome X, complete sequence Length = 138307 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 14115 gcaagacaaaagacaccgt 14097
>emb|AL807388.8| Mouse DNA sequence from clone RP23-255K14 on chromosome X, complete sequence Length = 157955 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 78087 gcaagacaaaagacaccgt 78105
>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence Length = 175751 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 53378 gcaagacaaaagacaccgt 53360
>gb|AC148295.3| Mus musculus BAC clone RP24-346N5 from 3, complete sequence Length = 131133 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 21609 gcaagacaaaagacaccgt 21627
>gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198030 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 17057 gcaagacaaaagacaccgt 17075
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 77962 gcaagacaaaagacaccgt 77980
>gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, complete sequence Length = 179111 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 168940 gcaagacaaaagacaccgt 168922
>gb|AC101890.9| Mus musculus chromosome 1, clone RP23-467L1, complete sequence Length = 174897 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 116517 gcaagacaaaagacaccgt 116535
>emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on chromosome X, complete sequence Length = 160230 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 70422 gcaagacaaaagacaccgt 70440
>gb|AC165167.3| Mus musculus BAC clone RP23-27M6 from chromosome 17, complete sequence Length = 235787 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 13590 gcaagacaaaagacaccgt 13608
>gb|AC124990.16| Mus musculus chromosome 3, clone RP24-283J17, complete sequence Length = 190156 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 130299 gcaagacaaaagacaccgt 130317
>emb|BX001045.11| Mouse DNA sequence from clone RP23-474E2 on chromosome X, complete sequence Length = 133817 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 47707 gcaagacaaaagacaccgt 47725
>gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, complete sequence Length = 220538 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 22650 gcaagacaaaagacaccgt 22632
>emb|CR936447.12| Mouse DNA sequence from clone RP23-301E3 on chromosome X, complete sequence Length = 57069 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 34329 gcaagacaaaagacaccgt 34311
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 135898 gcaagacaaaagacaccgt 135880
>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence Length = 211504 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 71373 gcaagacaaaagacaccgt 71355
>emb|AL772306.10| Mouse DNA sequence from clone RP23-89L15 on chromosome 4, complete sequence Length = 210648 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 87329 gcaagacaaaagacaccgt 87347
>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence Length = 225611 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 137590 gcaagacaaaagacaccgt 137572
>gb|AC102467.6| Mus musculus chromosome 1, clone RP24-348G21, complete sequence Length = 167344 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 137544 gcaagacaaaagacaccgt 137562
>gb|AC161449.4| Mus musculus BAC clone RP24-124N18 from chromosome 13, complete sequence Length = 150173 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 136085 gcaagacaaaagacaccgt 136067
>gb|AC171405.1| Mus musculus BAC clone RP23-103K10 from chromosome 17, complete sequence Length = 181342 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 1503 gcaagacaaaagacaccgt 1485
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 110628 gcaagacaaaagacaccgt 110646
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete sequence Length = 243954 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 104194 gcaagacaaaagacaccgt 104176
>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence Length = 195319 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 54366 gcaagacaaaagacaccgt 54348
>gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, complete sequence Length = 183160 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 80210 gcaagacaaaagacaccgt 80228
>emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chromosome X, complete sequence Length = 188116 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 50739 gcaagacaaaagacaccgt 50721
>emb|AL672071.9| Mouse DNA sequence from clone RP23-367O24 on chromosome X, complete sequence Length = 199416 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 97653 gcaagacaaaagacaccgt 97671
>emb|AL844500.1|CNS08CAS Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 85K17 of library RPCI-23 from chromosome 11 of strain C57Bl/6 of Mus musculus (mouse) Length = 234746 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 138131 gcaagacaaaagacaccgt 138113
>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete sequence Length = 221319 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 67750 gcaagacaaaagacaccgt 67732
>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete sequence Length = 237318 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 140548 gcaagacaaaagacaccgt 140530
>emb|AL669900.15| Mouse DNA sequence from clone RP23-254J17 on chromosome X, complete sequence Length = 207870 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 gcaagacaaaagacaccgt 104 ||||||||||||||||||| Sbjct: 101790 gcaagacaaaagacaccgt 101808
>emb|AL928635.5| Mouse DNA sequence from clone RP23-410E7 on chromosome 2, complete sequence Length = 175392 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 aaccacagctgtgcttctg 36 ||||||||||||||||||| Sbjct: 143580 aaccacagctgtgcttctg 143562 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 831,533 Number of Sequences: 3902068 Number of extensions: 831533 Number of successful extensions: 77757 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77323 Number of HSP's gapped (non-prelim): 434 length of query: 156 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 134 effective length of database: 17,147,199,772 effective search space: 2297724769448 effective search space used: 2297724769448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
