>NUOB_AQUAE (O67334) NADH-quinone oxidoreductase chain B (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain B) (NDH-1, chain B)
          Length = 179

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = -3

Query: 441 ASPKEAEGPPLLVKLRTDVNRVTPMVXTVLEKL--PRWCAPFGKSTS 307
           ASP++A+   +L+   T VN+V PM+  + +++  P+WC   G   S
Sbjct: 59  ASPRQAD---VLIVAGTVVNKVAPMLKLIWDQMPDPKWCISMGGCAS 102

>RA51B_MOUSE (O35719) DNA repair protein RAD51 homolog 2 (R51H2) (RAD51-like|
           protein 1)
          Length = 350

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 343 STLVCALRQVDISLHAGVPDRSSSQYLGDPHCVPQHFSLL 224
           ST +CAL   D +LH GVP  S ++  G P C    F ++
Sbjct: 84  STTLCAL---DEALHGGVPCGSLTEITGPPGCGKTQFCIM 120

>ACSA_BRAJA (Q89WV5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 648

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +2

Query: 23  PSYHSNPKFFDITQTVHSSHIFFTNGSPLRLTFRGGPVELKATNAMNLK 169
           P+Y  N +F+++    H  + F+T  + +R   +GG   +K T+  +L+
Sbjct: 331 PNYPDNSRFWNVIDK-HKVNTFYTAPTAIRALMQGGDEPVKKTSRASLR 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,935,353
Number of Sequences: 219361
Number of extensions: 1177658
Number of successful extensions: 2529
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)