ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags35g18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
2dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
3dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
4dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 2e-29
5dbj|D29698.1|RICYK10 Oryza sativa mRNA, partial homologous to c... 131 1e-27
6dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 5e-27
7gb|AY103824.1| Zea mays PCO135715 mRNA sequence 98 2e-17
8gb|AY109572.1| Zea mays CL1008_1 mRNA sequence 80 4e-12
9ref|XM_468113.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
10ref|XM_468112.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
11ref|XM_507011.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 2e-11
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
13dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
14dbj|AK119213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
15dbj|AK073762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
16dbj|AK060474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
17gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence 56 6e-05
18gb|M87646.1|SPICPN10X Spinach chaperonin 10 (CPN10) mRNA, comple... 52 0.001
19gb|AC165975.4| Mus musculus BAC clone RP23-3L23 from chromosome ... 42 0.94
20gb|AY373585.1| Homo sapiens myeloid/lymphoid or mixed-lineage le... 42 0.94
21ref|NM_005933.2| Homo sapiens myeloid/lymphoid or mixed-lineage ... 42 0.94
22emb|Z69780.1|HSALL1X37 H.sapiens ALL-1 gene exon 37 42 0.94
23dbj|AP001267.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 0.94
24dbj|D90041.1|HUMAACTA2 Homo sapiens mRNA for arylamine N-acetylt... 42 0.94
25dbj|AB209508.1| Homo sapiens mRNA for myeloid/lymphoid or mixed-... 42 0.94
26gb|L04731.1|HUMTRLALL1 Homo sapiens translocation T(4:11) of ALL... 42 0.94
27gb|AC149090.2| Mus musculus BAC clone RP24-130G10 from chromosom... 40 3.7
28gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 3.7
29gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 40 3.7
30emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chr... 40 3.7
31ref|NM_001031051.1| Gallus gallus similar to hypothetical protei... 40 3.7
32emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chr... 40 3.7
33emb|AJ719771.1| Gallus gallus mRNA for hypothetical protein, clo... 40 3.7
34gb|AC147984.3| Mus musculus BAC clone RP24-402A9 from chromosome... 40 3.7
35ref|XM_573464.1| PREDICTED: Rattus norvegicus similar to complem... 40 3.7
36gb|AF436847.2| Rattus norvegicus complement factor H-related pro... 40 3.7
37dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 3.7
38gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 3.7
39emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on ch... 40 3.7
40emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on ch... 40 3.7 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                           
Query: 173     cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
               |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 4964203 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 4964144

                                                    
Query: 233     cgccgcctgcgtacttggagtacagcacagtgctgcc 269
               | | |||||||||||||||||||| ||||||||||||
Sbjct: 4964143 cactgcctgcgtacttggagtacatcacagtgctgcc 4964107



 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                           
Query: 173     cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
               |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 4949083 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 4949024

                                                    
Query: 233     cgccgcctgcgtacttggagtacagcacagtgctgcc 269
               | | |||||||||||||||||||| ||||||||||||
Sbjct: 4949023 cactgcctgcgtacttggagtacatcacagtgctgcc 4948987
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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1172G12
          Length = 171974

 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                        
Query: 173  cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
            |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 6317 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 6258

                                                 
Query: 233  cgccgcctgcgtacttggagtacagcacagtgctgcc 269
            | | |||||||||||||||||||| ||||||||||||
Sbjct: 6257 cactgcctgcgtacttggagtacatcacagtgctgcc 6221
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>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E04
          Length = 170701

 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                          
Query: 173    cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
              |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 151686 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 151627

                                                   
Query: 233    cgccgcctgcgtacttggagtacagcacagtgctgcc 269
              | | |||||||||||||||||||| ||||||||||||
Sbjct: 151626 cactgcctgcgtacttggagtacatcacagtgctgcc 151590



 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                          
Query: 173    cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
              |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 136566 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 136507

                                                   
Query: 233    cgccgcctgcgtacttggagtacagcacagtgctgcc 269
              | | |||||||||||||||||||| ||||||||||||
Sbjct: 136506 cactgcctgcgtacttggagtacatcacagtgctgcc 136470
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>dbj|AK104352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G10, full
           insert sequence
          Length = 1129

 Score =  137 bits (69), Expect = 2e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 926 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 867

                                                
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcc 269
           | | |||||||||||||||||||| ||||||||||||
Sbjct: 866 cactgcctgcgtacttggagtacatcacagtgctgcc 830
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>dbj|D29698.1|RICYK10 Oryza sativa mRNA, partial  homologous to chaperonin 10 gene
          Length = 319

 Score =  131 bits (66), Expect = 1e-27
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           |||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||
Sbjct: 125 cagccatcacatctgatactctcaagacaatgtagttggtgccatcagctcccttgaact 66

                                                
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcc 269
           | | |||||| ||||||||||||| ||||||||||||
Sbjct: 65  cactgcctgcntacttggagtacatcacagtgctgcc 29
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>dbj|AK065072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K09, full
           insert sequence
          Length = 1130

 Score =  129 bits (65), Expect = 5e-27
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           |||||||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||
Sbjct: 927 cagccatcacatctgatactctcaagacaatgtagttggcgccatcagctcccttgaact 868

                                                
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcc 269
           | | |||||||||||||||||||| ||||||||||||
Sbjct: 867 cactgcctgcgtacttggagtacatcacagtgctgcc 831
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>gb|AY103824.1| Zea mays PCO135715 mRNA sequence
          Length = 1388

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 85/97 (87%)
 Strand = Plus / Minus

                                                                        
Query: 173  cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
            ||||||||||||| ||| |||||||||||||||||   |||||||| | |||||||||||
Sbjct: 1023 cagccatcacatccgacgctctcaacacaatgtaggccgtgccatccgcgcccttgaact 964

                                                 
Query: 233  cgccgcctgcgtacttggagtacagcacagtgctgcc 269
            | |  ||||| ||||||||||||||||| ||||||||
Sbjct: 963  cactccctgcatacttggagtacagcactgtgctgcc 927
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>gb|AY109572.1| Zea mays CL1008_1 mRNA sequence
          Length = 1955

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  gccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaactcg 234
            ||||||| ||| ||| | |||| ||| |||||||| ||||| || | |||||||||||||
Sbjct: 1728 gccatcagatccgacgccctcagcacgatgtagttcgtgccgtcggcgcccttgaactcg 1669

                                            
Query: 235  ccgcctgcgtacttggagtacagcacagtgct 266
            | ||| ||||||||||||||||| ||||||||
Sbjct: 1668 ctgccggcgtacttggagtacaggacagtgct 1637
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>ref|XM_468113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1056

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 860 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 801

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 800 cgctgccagcatatttggaatatagaacagtgctgcctg 762
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>ref|XM_468112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 877

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 678 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 619

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 618 cgctgccagcatatttggaatatagaacagtgctgcctg 580
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>ref|XM_507011.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1369_G08.10-2
           mRNA
          Length = 1111

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 859 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 800

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 799 cgctgccagcatatttggaatatagaacagtgctgcctg 761
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                            
Query: 173      cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
                ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 33133527 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 33133586

                                                       
Query: 233      cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
                ||| ||| || || ||||| || || |||||||||||||
Sbjct: 33133587 cgctgccagcatatttggaatatagaacagtgctgcctg 33133625
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                         
Query: 173   cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
             ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 49187 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 49246

                                                    
Query: 233   cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
             ||| ||| || || ||||| || || |||||||||||||
Sbjct: 49247 cgctgccagcatatttggaatatagaacagtgctgcctg 49285
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>dbj|AK119213.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E07, full
           insert sequence
          Length = 877

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 678 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 619

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 618 cgctgccagcatatttggaatatagaacagtgctgcctg 580
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>dbj|AK073762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067L06, full
           insert sequence
          Length = 1111

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 859 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 800

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 799 cgctgccagcatatttggaatatagaacagtgctgcctg 761
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>dbj|AK060474.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F02, full
           insert sequence
          Length = 1056

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 cagccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaact 232
           ||||||| | ||||||||| | |||||| |||||| | |||||||||| |||||||||||
Sbjct: 860 cagccattagatctgacacccgcaacactatgtagctcgtgccatcagagcccttgaact 801

                                                  
Query: 233 cgccgcctgcgtacttggagtacagcacagtgctgcctg 271
           ||| ||| || || ||||| || || |||||||||||||
Sbjct: 800 cgctgccagcatatttggaatatagaacagtgctgcctg 762
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>gb|BT018159.1| Zea mays clone EL01N0556C01.c mRNA sequence
          Length = 974

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 175 gccatcacatctgacactctcaacacaatgtagttggtgccatcagtgcccttgaactcg 234
           ||||||| ||| ||| | |||| ||| |||||||| ||||| || |  ||||||||||| 
Sbjct: 775 gccatcatatccgacgccctcagcactatgtagttcgtgccgtctgcccccttgaactct 716

                                           
Query: 235 ccgcctgcgtacttggagtacagcacagtgct 266
           | ||| ||||||||||||||||| ||| ||||
Sbjct: 715 ctgccggcgtacttggagtacaggacactgct 684
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>gb|M87646.1|SPICPN10X Spinach chaperonin 10 (CPN10) mRNA, complete cds
          Length = 881

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 163 taagagagctcagccatcacatctgacactctcaacacaatgtagt 208
           ||||| ||| ||||||||||||| || ||||||||||| |||||||
Sbjct: 815 taagaaagcacagccatcacatccgatactctcaacaccatgtagt 770
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>gb|AC165975.4| Mus musculus BAC clone RP23-3L23 from chromosome 5, complete sequence
          Length = 259091

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    gaaacaaagtaacaaactcca 158
              |||||||||||||||||||||
Sbjct: 106781 gaaacaaagtaacaaactcca 106801
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>gb|AY373585.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax
             homolog, Drosophila) (MLL) gene, complete cds
          Length = 89753

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   taagagagctcagccatcaca 183
             |||||||||||||||||||||
Sbjct: 87911 taagagagctcagccatcaca 87891
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>ref|NM_005933.2| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax
             homolog, Drosophila) (MLL), mRNA
          Length = 14982

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   taagagagctcagccatcaca 183
             |||||||||||||||||||||
Sbjct: 12071 taagagagctcagccatcaca 12051
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>emb|Z69780.1|HSALL1X37 H.sapiens ALL-1 gene exon 37
          Length = 4080

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 163 taagagagctcagccatcaca 183
           |||||||||||||||||||||
Sbjct: 444 taagagagctcagccatcaca 424
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>dbj|AP001267.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-770J1, complete
              sequence
          Length = 194310

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    taagagagctcagccatcaca 183
              |||||||||||||||||||||
Sbjct: 147748 taagagagctcagccatcaca 147728
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>dbj|D90041.1|HUMAACTA2 Homo sapiens mRNA for arylamine N-acetyltransferase, complete cds
          Length = 1319

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 199 acaatgtagttggtgccatca 219
           |||||||||||||||||||||
Sbjct: 508 acaatgtagttggtgccatca 488
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>dbj|AB209508.1| Homo sapiens mRNA for myeloid/lymphoid or mixed-lineage leukemia
            (trithorax homolog, Drosophila) variant protein
          Length = 11222

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  taagagagctcagccatcaca 183
            |||||||||||||||||||||
Sbjct: 9615 taagagagctcagccatcaca 9595
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>gb|L04731.1|HUMTRLALL1 Homo sapiens translocation T(4:11) of ALL-1 gene to chromosome 4
          Length = 14255

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   taagagagctcagccatcaca 183
             |||||||||||||||||||||
Sbjct: 11871 taagagagctcagccatcaca 11851
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>gb|AC149090.2| Mus musculus BAC clone RP24-130G10 from chromosome Y, complete sequence
          Length = 114452

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   aactgaaacaaagtaacaaa 153
             ||||||||||||||||||||
Sbjct: 38116 aactgaaacaaagtaacaaa 38097
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     gcgtacttggagtacagcac 260
               ||||||||||||||||||||
Sbjct: 4522058 gcgtacttggagtacagcac 4522077
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
             complete sequence
          Length = 140064

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tgaaacaaagtaacaaactc 156
             ||||||||||||||||||||
Sbjct: 79459 tgaaacaaagtaacaaactc 79440
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>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains a
             novel gene and a protein tyrosine phosphatase non-receptor
             type 11 (Nooan syndrome) (PTPN11) pseudogene, complete
             sequence
          Length = 115224

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   tgaactcaaaactgaaacaa 144
             ||||||||||||||||||||
Sbjct: 55373 tgaactcaaaactgaaacaa 55392
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>ref|NM_001031051.1| Gallus gallus similar to hypothetical protein MGC29875; novel
            putative protein similar to YIL091C yeast hypothetical 84
            kD protein from SGA1-KTR7 (LOC421384), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 242  cgtacttggagtacagcacagtgc 265
            ||||||||||||| ||||||||||
Sbjct: 2239 cgtacttggagtagagcacagtgc 2216
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>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four
             novel genes, an eukaryotic translation elongation factor 2
             (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma
             virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene,
             the Eif4enif1 gene for eukaryotic translation initiation
             factor 4E nuclear import factor 1, the  Drg1 gene for
             developmentally regulated GTP binding protein 1, the
             Zfp278 gene for zinc finger protein 278, the 3' end of the
             Limk2 gene LIM motif-containing protein kinase 2 and five
             CpG islands, complete sequence
          Length = 214546

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aactgaaacaaagtaacaaa 153
             ||||||||||||||||||||
Sbjct: 12499 aactgaaacaaagtaacaaa 12518
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>emb|AJ719771.1| Gallus gallus mRNA for hypothetical protein, clone 6f17
          Length = 2980

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 242  cgtacttggagtacagcacagtgc 265
            ||||||||||||| ||||||||||
Sbjct: 2239 cgtacttggagtagagcacagtgc 2216
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>gb|AC147984.3| Mus musculus BAC clone RP24-402A9 from chromosome y, complete sequence
          Length = 164496

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aactgaaacaaagtaacaaa 153
              ||||||||||||||||||||
Sbjct: 134284 aactgaaacaaagtaacaaa 134303
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>ref|XM_573464.1| PREDICTED: Rattus norvegicus similar to complement factor H-related
            protein (LOC498241), mRNA
          Length = 2715

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   aattctataaccatctgaaa 72
            ||||||||||||||||||||
Sbjct: 2689 aattctataaccatctgaaa 2670
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>gb|AF436847.2| Rattus norvegicus complement factor H-related protein mRNA, complete
            cds
          Length = 2729

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   aattctataaccatctgaaa 72
            ||||||||||||||||||||
Sbjct: 2689 aattctataaccatctgaaa 2670
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 241     gcgtacttggagtacagcac 260
               ||||||||||||||||||||
Sbjct: 4418997 gcgtacttggagtacagcac 4418978
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      cagcaatctcacccctgatg 111
               ||||||||||||||||||||
Sbjct: 1740200 cagcaatctcacccctgatg 1740181
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>emb|AL672147.10| Mouse DNA sequence from clone RP23-434N14 on chromosome X, complete
              sequence
          Length = 192252

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aaacaaagtaacaaactcca 158
              ||||||||||||||||||||
Sbjct: 154398 aaacaaagtaacaaactcca 154417
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>emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on chromosome 2, complete
             sequence
          Length = 220495

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   acactctcaacacaatgtagttgg 211
             |||||||||||||| |||||||||
Sbjct: 96313 acactctcaacacagtgtagttgg 96336


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,311,662
Number of Sequences: 3902068
Number of extensions: 2311662
Number of successful extensions: 40614
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40528
Number of HSP's gapped (non-prelim): 86
length of query: 285
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 263
effective length of database: 17,147,199,772
effective search space: 4509713540036
effective search space used: 4509713540036
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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