ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 381 bits (192), Expect = e-102 Identities = 343/392 (87%), Gaps = 1/392 (0%) Strand = Plus / Plus Query: 130 ggagctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcg 189 ||||||||||||||||||||||| || ||||| |||||||||||||| | ||||| |||| Sbjct: 10796067 ggagctcacatcctgctcttcttgacggggccgagctccttggccttggtcctcagctcg 10796126 Query: 190 tgtttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcggg 249 || ||||||||||| ||||| |||||||| |||| ||||||||| || |||||||| || Sbjct: 10796127 tgcttcttgatcttccccgtcgccgtcttgggcagcggcccgaacaccaccgacttgggc 10796186 Query: 250 acccagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacc 309 |||||||| ||||||||||| |||| |||||||| ||| || ||| |||| |||| || Sbjct: 10796187 acccagtaccccggcatcctctccctgcagaaccgcatgatgtcgccggccaccgccgcc 10796246 Query: 310 tcgtcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccac 369 |||||||||| |||| ||||||||||| || |||||||| || ||||||||||||||| Sbjct: 10796247 tcgtcggagctgtcggcgccttccttgagcgtcacgaacgcgcacggcgactccccccac 10796306 Query: 370 cgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccacc 429 | ||||| ||||| || || ||||| |||||||| |||||||||||| ||||| |||| Sbjct: 10796307 tgctcgtccgccctcgccaccaccgacgcctccagcaccgccgggtgcgcgtacagcacc 10796366 Query: 430 ttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccg 489 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10796367 ttctccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttcatccg 10796425 Query: 490 gtccttgacttcgatgtacccgtcggggtgct 521 |||||| || |||||||||||||||||||||| Sbjct: 10796426 gtccttcacctcgatgtacccgtcggggtgct 10796457 Score = 287 bits (145), Expect = 2e-74 Identities = 329/389 (84%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 133 gctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcgtgt 192 |||||||||||||||||| || ||||| | ||||||||||| ||||||| |||||| Sbjct: 10788019 gctcacatcctgctcttccggaccgggcccaattccttggccttggccctcagctcgtgc 10788078 Query: 193 ttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcgggacc 252 ||||||||||| ||||| |||||||| |||| ||||||||| ||||| ||||| || ||| Sbjct: 10788079 ttcttgatcttccccgtcgccgtcttgggcagcggcccgaacacgacggacttgggcacc 10788138 Query: 253 cagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacctcg 312 ||||| ||||||| ||| ||||||||||||| ||| || ||| || || ||| ||||| Sbjct: 10788139 cagtaccccggcagcctctcccggcagaaccgcatgatgtcgccggcgagtgccgcctcg 10788198 Query: 313 tcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccaccga 372 ||||||| |||| || |||||| | || |||||||| || ||||||||||||||| | Sbjct: 10788199 tcggagctgtcggcgccgtccttgggcgtcacgaacgcgcatggcgactccccccactgc 10788258 Query: 373 tcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccaccttc 432 |||||||||| || || ||||| |||||||| |||||||||||| ||||||| ||||| Sbjct: 10788259 tcgtcggcccgcgccaccaccgacgcctccagcaccgccgggtgctggtacaccgccttc 10788318 Query: 433 tccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccggtc 492 |||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||| Sbjct: 10788319 tccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttagccctgtc 10788377 Query: 493 cttgacttcgatgtacccgtcggggtgct 521 ||| || |||||||||||||||| ||||| Sbjct: 10788378 cttcacctcgatgtacccgtcggtgtgct 10788406 Score = 54.0 bits (27), Expect = 5e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||||| ||||||||||| || | | |||| ||||||||| | | |||||||||| Sbjct: 1866883 gcctccagcaccgccgggtggctgaagatcaccgactccacctcgatcgagctgatgttc 1866942 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| | | |||||||||||||| ||||||||||| | |||||||||||| || Sbjct: 1866943 tcgccgcccg-atatgatgatgtccttggcccggtccttgagctggatgtacccgtcagg 1867001 Query: 517 gtg 519 ||| Sbjct: 1867002 gtg 1867004
>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08, from chromosome 3, complete sequence Length = 108833 Score = 381 bits (192), Expect = e-102 Identities = 343/392 (87%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 130 ggagctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcg 189 ||||||||||||||||||||||| || ||||| |||||||||||||| | ||||| |||| Sbjct: 58820 ggagctcacatcctgctcttcttgacggggccgagctccttggccttggtcctcagctcg 58761 Query: 190 tgtttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcggg 249 || ||||||||||| ||||| |||||||| |||| ||||||||| || |||||||| || Sbjct: 58760 tgcttcttgatcttccccgtcgccgtcttgggcagcggcccgaacaccaccgacttgggc 58701 Query: 250 acccagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacc 309 |||||||| ||||||||||| |||| |||||||| ||| || ||| |||| |||| || Sbjct: 58700 acccagtaccccggcatcctctccctgcagaaccgcatgatgtcgccggccaccgccgcc 58641 Query: 310 tcgtcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccac 369 |||||||||| |||| ||||||||||| || |||||||| || ||||||||||||||| Sbjct: 58640 tcgtcggagctgtcggcgccttccttgagcgtcacgaacgcgcacggcgactccccccac 58581 Query: 370 cgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccacc 429 | ||||| ||||| || || ||||| |||||||| |||||||||||| ||||| |||| Sbjct: 58580 tgctcgtccgccctcgccaccaccgacgcctccagcaccgccgggtgcgcgtacagcacc 58521 Query: 430 ttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccg 489 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 58520 ttctccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttcatccg 58462 Query: 490 gtccttgacttcgatgtacccgtcggggtgct 521 |||||| || |||||||||||||||||||||| Sbjct: 58461 gtccttcacctcgatgtacccgtcggggtgct 58430 Score = 287 bits (145), Expect = 2e-74 Identities = 329/389 (84%), Gaps = 1/389 (0%) Strand = Plus / Minus Query: 133 gctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcgtgt 192 |||||||||||||||||| || ||||| | ||||||||||| ||||||| |||||| Sbjct: 66868 gctcacatcctgctcttccggaccgggcccaattccttggccttggccctcagctcgtgc 66809 Query: 193 ttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcgggacc 252 ||||||||||| ||||| |||||||| |||| ||||||||| ||||| ||||| || ||| Sbjct: 66808 ttcttgatcttccccgtcgccgtcttgggcagcggcccgaacacgacggacttgggcacc 66749 Query: 253 cagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacctcg 312 ||||| ||||||| ||| ||||||||||||| ||| || ||| || || ||| ||||| Sbjct: 66748 cagtaccccggcagcctctcccggcagaaccgcatgatgtcgccggcgagtgccgcctcg 66689 Query: 313 tcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccaccga 372 ||||||| |||| || |||||| | || |||||||| || ||||||||||||||| | Sbjct: 66688 tcggagctgtcggcgccgtccttgggcgtcacgaacgcgcatggcgactccccccactgc 66629 Query: 373 tcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccaccttc 432 |||||||||| || || ||||| |||||||| |||||||||||| ||||||| ||||| Sbjct: 66628 tcgtcggcccgcgccaccaccgacgcctccagcaccgccgggtgctggtacaccgccttc 66569 Query: 433 tccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccggtc 492 |||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||| Sbjct: 66568 tccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttagccctgtc 66510 Query: 493 cttgacttcgatgtacccgtcggggtgct 521 ||| || |||||||||||||||| ||||| Sbjct: 66509 cttcacctcgatgtacccgtcggtgtgct 66481
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 381 bits (192), Expect = e-102 Identities = 343/392 (87%), Gaps = 1/392 (0%) Strand = Plus / Plus Query: 130 ggagctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcg 189 ||||||||||||||||||||||| || ||||| |||||||||||||| | ||||| |||| Sbjct: 10794168 ggagctcacatcctgctcttcttgacggggccgagctccttggccttggtcctcagctcg 10794227 Query: 190 tgtttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcggg 249 || ||||||||||| ||||| |||||||| |||| ||||||||| || |||||||| || Sbjct: 10794228 tgcttcttgatcttccccgtcgccgtcttgggcagcggcccgaacaccaccgacttgggc 10794287 Query: 250 acccagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacc 309 |||||||| ||||||||||| |||| |||||||| ||| || ||| |||| |||| || Sbjct: 10794288 acccagtaccccggcatcctctccctgcagaaccgcatgatgtcgccggccaccgccgcc 10794347 Query: 310 tcgtcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccac 369 |||||||||| |||| ||||||||||| || |||||||| || ||||||||||||||| Sbjct: 10794348 tcgtcggagctgtcggcgccttccttgagcgtcacgaacgcgcacggcgactccccccac 10794407 Query: 370 cgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccacc 429 | ||||| ||||| || || ||||| |||||||| |||||||||||| ||||| |||| Sbjct: 10794408 tgctcgtccgccctcgccaccaccgacgcctccagcaccgccgggtgcgcgtacagcacc 10794467 Query: 430 ttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccg 489 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10794468 ttctccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttcatccg 10794526 Query: 490 gtccttgacttcgatgtacccgtcggggtgct 521 |||||| || |||||||||||||||||||||| Sbjct: 10794527 gtccttcacctcgatgtacccgtcggggtgct 10794558 Score = 287 bits (145), Expect = 2e-74 Identities = 329/389 (84%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 133 gctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcgtgt 192 |||||||||||||||||| || ||||| | ||||||||||| ||||||| |||||| Sbjct: 10786120 gctcacatcctgctcttccggaccgggcccaattccttggccttggccctcagctcgtgc 10786179 Query: 193 ttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcgggacc 252 ||||||||||| ||||| |||||||| |||| ||||||||| ||||| ||||| || ||| Sbjct: 10786180 ttcttgatcttccccgtcgccgtcttgggcagcggcccgaacacgacggacttgggcacc 10786239 Query: 253 cagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacctcg 312 ||||| ||||||| ||| ||||||||||||| ||| || ||| || || ||| ||||| Sbjct: 10786240 cagtaccccggcagcctctcccggcagaaccgcatgatgtcgccggcgagtgccgcctcg 10786299 Query: 313 tcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccaccga 372 ||||||| |||| || |||||| | || |||||||| || ||||||||||||||| | Sbjct: 10786300 tcggagctgtcggcgccgtccttgggcgtcacgaacgcgcatggcgactccccccactgc 10786359 Query: 373 tcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccaccttc 432 |||||||||| || || ||||| |||||||| |||||||||||| ||||||| ||||| Sbjct: 10786360 tcgtcggcccgcgccaccaccgacgcctccagcaccgccgggtgctggtacaccgccttc 10786419 Query: 433 tccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccggtc 492 |||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||| Sbjct: 10786420 tccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttagccctgtc 10786478 Query: 493 cttgacttcgatgtacccgtcggggtgct 521 ||| || |||||||||||||||| ||||| Sbjct: 10786479 cttcacctcgatgtacccgtcggtgtgct 10786507 Score = 54.0 bits (27), Expect = 5e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||||| ||||||||||| || | | |||| ||||||||| | | |||||||||| Sbjct: 1866881 gcctccagcaccgccgggtggctgaagatcaccgactccacctcgatcgagctgatgttc 1866940 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| | | |||||||||||||| ||||||||||| | |||||||||||| || Sbjct: 1866941 tcgccgcccg-atatgatgatgtccttggcccggtccttgagctggatgtacccgtcagg 1866999 Query: 517 gtg 519 ||| Sbjct: 1867000 gtg 1867002
>dbj|AK101765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064F11, full insert sequence Length = 1929 Score = 381 bits (192), Expect = e-102 Identities = 343/392 (87%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 130 ggagctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcg 189 ||||||||||||||||||||||| || ||||| |||||||||||||| | ||||| |||| Sbjct: 1833 ggagctcacatcctgctcttcttgacggggccgagctccttggccttggtcctcagctcg 1774 Query: 190 tgtttcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcggg 249 || ||||||||||| ||||| |||||||| |||| ||||||||| || |||||||| || Sbjct: 1773 tgcttcttgatcttccccgtcgccgtcttgggcagcggcccgaacaccaccgacttgggc 1714 Query: 250 acccagtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacc 309 |||||||| ||||||||||| |||| |||||||| ||| || ||| |||| |||| || Sbjct: 1713 acccagtaccccggcatcctctccctgcagaaccgcatgatgtcgccggccaccgccgcc 1654 Query: 310 tcgtcggagccaccggccccttccttgagggtaacgaacgcacagggcgactccccccac 369 |||||||||| |||| ||||||||||| || |||||||| || ||||||||||||||| Sbjct: 1653 tcgtcggagctgtcggcgccttccttgagcgtcacgaacgcgcacggcgactccccccac 1594 Query: 370 cgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacaccacc 429 | ||||| ||||| || || ||||| |||||||| |||||||||||| ||||| |||| Sbjct: 1593 tgctcgtccgccctcgccaccaccgacgcctccagcaccgccgggtgcgcgtacagcacc 1534 Query: 430 ttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccg 489 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1533 ttctccacctccaggctgctgatgttctccccgcc-ggagatgatgatgtccttcatccg 1475 Query: 490 gtccttgacttcgatgtacccgtcggggtgct 521 |||||| || |||||||||||||||||||||| Sbjct: 1474 gtccttcacctcgatgtacccgtcggggtgct 1443
>gb|AY107917.1| Zea mays PCO071987 mRNA sequence Length = 1735 Score = 315 bits (159), Expect = 8e-83 Identities = 336/394 (85%), Gaps = 7/394 (1%) Strand = Plus / Minus Query: 134 ctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcgtgtt 193 |||||||||||||||||||||||||||| ||||| ||||| | ||||||| |||||| | Sbjct: 1516 ctcacatcctgctcttcttcacagggccgagctctttggctctggccctcagctcgtgct 1457 Query: 194 tcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcgggaccc 253 |||||||||| ||||| |||||||| |||| ||||||||||| ||||||||| || |||| Sbjct: 1456 tcttgatcttccccgtggccgtcttgggcagcggcccgaagatgaccgacttgggcaccc 1397 Query: 254 agtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacctcgt 313 |||| ||||||||||| ||||||||||| | ||| || ||||| ||||||||| |||||| Sbjct: 1396 agtaccccggcatcctctcccggcagaagcgcatgatgtcgttggccagcgccgcctcgt 1337 Query: 314 cggagccaccg------gccccttccttgagggtaacgaacgcacagggcgactcccccc 367 | || || || || || |||||||| || |||||||| || |||||||| |||| Sbjct: 1336 ccgacccgtcggctgctgctccgtccttgagcgtcacgaacgcgcacggcgactcgcccc 1277 Query: 368 accgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacacca 427 |||| |||||||||||||| || |||||| |||| || |||||||||||| | ||| || Sbjct: 1276 accgctcgtcggccctggcgaccaccgagacctcgagcaccgccgggtgcgcgcacagca 1217 Query: 428 ccttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatc 487 ||||||||||||||||| |||||||||||||||| || ||||||||| | |||||||||| Sbjct: 1216 ccttctccacctccaggctgctgatgttctcccctcc-ggagatgatcacgtccttcatc 1158 Query: 488 cggtccttgacttcgatgtacccgtcggggtgct 521 |||||| | || |||| ||||||||||||||||| Sbjct: 1157 cggtccctcacctcgacgtacccgtcggggtgct 1124
>gb|BT017847.1| Zea mays clone EL01N0510F04.c mRNA sequence Length = 1087 Score = 252 bits (127), Expect = 1e-63 Identities = 329/394 (83%), Gaps = 8/394 (2%) Strand = Plus / Minus Query: 134 ctcacatcctgctcttcttcacagggccaagctccttggccttcgccctcaactcgtgtt 193 ||||||||||||||||||| | ||||| ||||| |||||| | ||||||| |||||| | Sbjct: 906 ctcacatcctgctcttcttg-cggggccgagctctttggccctggccctcagctcgtgct 848 Query: 194 tcttgatctttcccgttgccgtcttcggcaacggcccgaagacgaccgacttcgggaccc 253 |||||||||| ||||| |||||||| |||| ||||||||||| ||||||||| || |||| Sbjct: 847 tcttgatcttccccgtggccgtcttgggcagcggcccgaagatgaccgacttgggcaccc 788 Query: 254 agtagcccggcatcctttcccggcagaacctcataatatcgtttgccagcgccacctcgt 313 |||| ||||||||||| ||||||||||| | ||| || ||||| ||||||||| | |||| Sbjct: 787 agtaccccggcatcctctcccggcagaagcgcatgatgtcgttggccagcgccgcttcgt 728 Query: 314 cggagccaccg------gccccttccttgagggtaacgaacgcacagggcgactcccccc 367 | || || || || || |||||||| || |||||||| || |||||||| |||| Sbjct: 727 ccgacccgtcggctgctgctccgtccttgagcgtcacgaacgcgcacggcgactcgcccc 668 Query: 368 accgatcgtcggccctggcaactaccgaggcctccaggaccgccgggtgcatgtacacca 427 |||| |||||||||||||| || ||||| |||| | || ||||||||| | ||| || Sbjct: 667 accgctcgtcggccctggcgaccaccgatacctcgaacactgccgggtgcgcgcacagca 608 Query: 428 ccttctccacctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatc 487 ||||||| ||||||||| |||||||||||||||| || ||||||||| | |||||||||| Sbjct: 607 ccttctcgacctccaggctgctgatgttctcccctcc-ggagatgatcacgtccttcatc 549 Query: 488 cggtccttgacttcgatgtacccgtcggggtgct 521 |||||| | || |||| ||||||||||||||||| Sbjct: 548 cggtccctcacctcgacgtacccgtcggggtgct 515
>gb|BT017611.1| Zea mays clone EL01N0432G07.c mRNA sequence Length = 1219 Score = 71.9 bits (36), Expect = 2e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 684 ctccacctcgatggtgctgatgttctccccgcc-ggagatgatgatgtcctt 634
>gb|AY105965.1| Zea mays PCO078009 mRNA sequence Length = 726 Score = 71.9 bits (36), Expect = 2e-09 Identities = 49/52 (94%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 191 ctccacctcgatggtgctgatgttctccccgcc-ggagatgatgatgtcctt 141
>ref|NM_183955.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1794 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 1434 ctccacctcgaccgtgctgatgttctccccgcc-ggagatgatgatgtcctt 1384
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 13524281 ctccacctcgaccgtgctgatgttctccccgcc-ggagatgatgatgtcctt 13524231
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 78241 ctccacctcgaccgtgctgatgttctccccgcc-ggagatgatgatgtcctt 78191
>dbj|AK063921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B10, full insert sequence Length = 2024 Score = 63.9 bits (32), Expect = 5e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 1505 ctccacctcgaccgtgctgatgttctccccgcc-ggagatgatgatgtcctt 1455
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||| | |||||||||||| ||||| | || ||||||||||| | ||||||||||| Sbjct: 127844 gcctcccgcaccgccgggtgctggtacagcgccgcctccacctccacgctgctgatgttc 127903 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| ||||||||| | |||||| ||||||||||| || | ||||||||| || Sbjct: 127904 tcgccgcc-ggagatgatcacgtccttggaccggtccttgatctccacgtacccgtccgg 127962 Query: 517 gtg 519 ||| Sbjct: 127963 gtg 127965
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 101/123 (82%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||| | |||||||||||| ||||| | || ||||||||||| | ||||||||||| Sbjct: 21781824 gcctcccgcaccgccgggtgctggtacagcgccgcctccacctccacgctgctgatgttc 21781883 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| ||||||||| | |||||| ||||||||||| || | ||||||||| || Sbjct: 21781884 tcgccgcc-ggagatgatcacgtccttggaccggtccttgatctccacgtacccgtccgg 21781942 Query: 517 gtg 519 ||| Sbjct: 21781943 gtg 21781945
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 54.0 bits (27), Expect = 5e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||||| ||||||||||| || | | |||| ||||||||| | | |||||||||| Sbjct: 91745 gcctccagcaccgccgggtggctgaagatcaccgactccacctcgatcgagctgatgttc 91804 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| | | |||||||||||||| ||||||||||| | |||||||||||| || Sbjct: 91805 tcgccgcccg-atatgatgatgtccttggcccggtccttgagctggatgtacccgtcagg 91863 Query: 517 gtg 519 ||| Sbjct: 91864 gtg 91866
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 54.0 bits (27), Expect = 5e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 451 atgttctccccgccgggagatgatgatgtccttcatccggtccttga 497 |||||||||||||||| |||||||||||||||| | |||||||||| Sbjct: 2381101 atgttctccccgccgg-agatgatgatgtccttgctgcggtccttga 2381056 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 ttcttgatctttcccgttgccgtcttcggcaac 225 ||||||| ||| |||||||||||| |||||||| Sbjct: 485791 ttcttgaccttgcccgttgccgtcatcggcaac 485823
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 54.0 bits (27), Expect = 5e-04 Identities = 100/123 (81%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 397 gcctccaggaccgccgggtgcatgtacaccaccttctccacctccagggtgctgatgttc 456 |||||||| ||||||||||| || | | |||| ||||||||| | | |||||||||| Sbjct: 108528 gcctccagcaccgccgggtggctgaagatcaccgactccacctcgatcgagctgatgttc 108469 Query: 457 tccccgccgggagatgatgatgtccttcatccggtccttgacttcgatgtacccgtcggg 516 || ||||| | | |||||||||||||| ||||||||||| | |||||||||||| || Sbjct: 108468 tcgccgcccg-atatgatgatgtccttggcccggtccttgagctggatgtacccgtcagg 108410 Query: 517 gtg 519 ||| Sbjct: 108409 gtg 108407
>gb|AF241171.1|AF241171 Pseudomonas aeruginosa pathogenicity island PAGI-1 gene, complete sequence Length = 51300 Score = 54.0 bits (27), Expect = 5e-04 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 438 ctccagggtgctgatgttctccccgccgggagatgatgatgtccttcatccggtccttga 497 |||||| | |||||||||||| ||||||| | |||||||||||||| ||||||||||| Sbjct: 12763 ctccagcgagctgatgttctcgccgccggaa-atgatgatgtccttggcccggtccttga 12705 Query: 498 cttcgatgtacccgtcggggtgc 520 ||| | ||| ||||| |||||| Sbjct: 12704 tttccacgtagccgtccgggtgc 12682
>ref|XM_474328.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 1371 ctccacctccacgctgctgatgttctccccgccg 1338
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 97884 ctccacctccacgctgctgatgttctccccgccg 97917
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 34480399 ctccacctccacgctgctgatgttctccccgccg 34480432
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 52.0 bits (26), Expect = 0.002 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 447 gctgatgttctccccgccgggagatgatgatgtccttc 484 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 1425660 gctgatgttctccccgcc-ggagatgatgaggtccttc 1425696 Score = 48.1 bits (24), Expect = 0.029 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 450 gatgttctccccgccgggagatgatgatgtccttcatccggtcc 493 |||||||||||||||| | |||||| |||||||| ||||||||| Sbjct: 3420991 gatgttctccccgccgcg-gatgatcatgtccttgatccggtcc 3420949
>dbj|AK106615.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H10, full insert sequence Length = 1897 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 1465 ctccacctccacgctgctgatgttctccccgccg 1432
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 101948 ctccacctccacgctgctgatgttctccccgccg 101981
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 432 ctccacctccagggtgctgatgttctccccgccg 465 ||||||||||| | |||||||||||||||||||| Sbjct: 12281 ctccacctccacgctgctgatgttctccccgccg 12314
>ref|XM_463896.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1967 Score = 48.1 bits (24), Expect = 0.029 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1512 ctccacctcgattgtgctgatgttctccccgcc-cgagattatgatgtcctt 1462
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.029 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1015718 ctccacctcgattgtgctgatgttctccccgcc-cgagattatgatgtcctt 1015668
>gb|AE004836.1| Pseudomonas aeruginosa PAO1, section 397 of 529 of the complete genome Length = 11127 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Minus Query: 337 agggtaacgaacgcacagggcgactccccccaccgatcgtcggccctggcaactaccgag 396 ||||||| |||||||||||||| ||||||||| ||||||| || || || |||| Sbjct: 5684 agggtaatgaacgcacagggcgtttccccccacttttcgtcgggccgcgccaccaccgcc 5625 Query: 397 gcctccaggaccgccgggtg 416 |||||||| ||||||||||| Sbjct: 5624 gcctccagcaccgccgggtg 5605
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 48.1 bits (24), Expect = 0.029 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 4426 ctccacctcgattgtgctgatgttctccccgcc-cgagattatgatgtcctt 4376
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 469 gatgatgatgtccttcatccggtc 492 |||||||||||||||||||||||| Sbjct: 8703354 gatgatgatgtccttcatccggtc 8703377
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 48.1 bits (24), Expect = 0.029 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 87137 ctccacctcgattgtgctgatgttctccccgcc-cgagattatgatgtcctt 87087
>dbj|AK070181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H21, full insert sequence Length = 1967 Score = 48.1 bits (24), Expect = 0.029 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 432 ctccacctccagggtgctgatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| | |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1512 ctccacctcgattgtgctgatgttctccccgcc-cgagattatgatgtcctt 1462
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 450 gatgttctccccgccgggagatgatgatgtccttc 484 ||||||||| ||||||| ||||||||||||||||| Sbjct: 732655 gatgttctcgccgccgg-agatgatgatgtccttc 732622
>gb|AF076335.1|AF076335 Brassica napus chalcone synthase B1 (CHSB1) mRNA, complete cds Length = 1259 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 ccaagctccttggccttcgccct 182 ||||||||||||||||||||||| Sbjct: 520 ccaagctccttggccttcgccct 542
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.45 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 450 gatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| ||||||| |||||||||||||||| Sbjct: 284148 gatgttctcgccgccgg-agatgatgatgtcctt 284116
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 gtcttcggcaacggcccgaaga 235 |||||||||||||||||||||| Sbjct: 3861720 gtcttcggcaacggcccgaaga 3861741
>gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the complete genome Length = 13571 Score = 44.1 bits (22), Expect = 0.45 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 450 gatgttctccccgccgggagatgatgatgtcctt 483 ||||||||| ||||||| |||||||||||||||| Sbjct: 10560 gatgttctcgccgccgg-agatgatgatgtcctt 10528
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.45 Identities = 40/46 (86%) Strand = Plus / Minus Query: 470 atgatgatgtccttcatccggtccttgacttcgatgtacccgtcgg 515 |||||||||||||| | ||||||||||| ||||| || ||||||| Sbjct: 4029944 atgatgatgtccttgagccggtccttgatctcgatatagccgtcgg 4029899
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.45 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 439 tccagggtgctgatgttctccccgccgggagatgatgatgtc 480 ||||||| |||||||||||| |||||| | |||||||||||| Sbjct: 2429902 tccagggcgctgatgttctcgccgccgcg-gatgatgatgtc 2429942
>ref|NM_031504.1| Rattus norvegicus complement component 4a (C4a), mRNA Length = 5351 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggaggcggagctcacatcctg 144 ||||||||||||||||||||| Sbjct: 1053 ggaggcggagctcacatcctg 1073
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.8 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 453 gttctccccgccgggagatgatgatgtccttcatccggtccttga 497 |||||| ||||||| | ||||| |||||||||| ||||||||||| Sbjct: 3452775 gttctcgccgccggaa-atgatcatgtccttcagccggtccttga 3452732
>gb|AY239502.1| Funisciurus carruthersi C-myc (c-myc) gene, exon 2 and partial cds Length = 685 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 454 ttctccccgccgggagatgatgatg 478 |||||||| |||||||||||||||| Sbjct: 211 ttctcccccccgggagatgatgatg 235
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggaggcggagctcacatcctg 144 ||||||||||||||||||||| Sbjct: 11688 ggaggcggagctcacatcctg 11668
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 42.1 bits (21), Expect = 1.8 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 453 gttctccccgccgggagatgatgatgtccttcatccggtccttga 497 |||||| ||||||| | ||||| |||||||||| ||||||||||| Sbjct: 337947 gttctcgccgccggaa-atgatcatgtccttcagccggtccttga 337904
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 42.1 bits (21), Expect = 1.8 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 453 gttctccccgccgggagatgatgatgtccttcatccggtccttga 497 |||||| ||||||| | ||||| |||||||||| ||||||||||| Sbjct: 288531 gttctcgccgccggaa-atgatcatgtccttcagccggtccttga 288488
>gb|AE004574.1| Pseudomonas aeruginosa PAO1, section 135 of 529 of the complete genome Length = 12144 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 ttgccgtcttcggcaacggcc 229 ||||||||||||||||||||| Sbjct: 399 ttgccgtcttcggcaacggcc 379
>gb|AY149995.1| Rattus norvegicus complement component C4 mRNA, complete cds Length = 5351 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggaggcggagctcacatcctg 144 ||||||||||||||||||||| Sbjct: 1053 ggaggcggagctcacatcctg 1073
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 352 cagggcgactccccccaccgatcgtcggc 380 |||||| ||||||||||||||||| |||| Sbjct: 2686983 cagggccactccccccaccgatcgccggc 2686955
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.8 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 451 atgttctccccgccgggagatgatgatgtcctt 483 |||||||| ||||||| |||||||||||||||| Sbjct: 2044392 atgttctcgccgccgg-agatgatgatgtcctt 2044423
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.8 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 450 gatgttctccccgccgggagatgatgatgtccttcatccggtcct 494 ||||||||| |||||| ||||||||||| |||||| | ||||||| Sbjct: 1646924 gatgttctctccgccg-gagatgatgatatccttcttgcggtcct 1646881
>ref|NM_030726.1| Mus musculus MAS-related GPR, member H (Mrgprh), mRNA Length = 1809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 169 caccaccttctccacctcca 188
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 gatgatgatgtccttcatccggtc 492 |||||| ||||||||||||||||| Sbjct: 1959940 gatgatcatgtccttcatccggtc 1959963
>gb|DQ471284.1| Synthetic construct pBI-SS(Tob)(SPPP)15-EGFP gene, complete cds Length = 1042 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 239 caccaccttctccacctcca 258 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 191 caccaccttctccacctcca 210 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 143 caccaccttctccacctcca 162 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 95 caccaccttctccacctcca 114
>gb|AC156947.7| Mus musculus 10 BAC RP24-374M24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177171 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tgtttgaatttcttatacagacca 32 |||||||| ||||||||||||||| Sbjct: 15662 tgtttgaacttcttatacagacca 15685
>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence Length = 203077 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 43500 caccaccttctccacctcca 43519
>emb|AJ428529.1|AEV428529 Azoarcus evansii bzdN gene, bzdO gene, bzdP gene, bzdQ gene, bzdR gene, ORF1, ORF2, bzdV gene, bzdW gene, bzdX gene, bzdY gene, bzdZ gene, bzdA gene and partial bzdB' gene Length = 16512 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 gatctttcccgttgccgtcttcggcaac 225 ||||||||| || ||||||||||||||| Sbjct: 14926 gatctttccggtggccgtcttcggcaac 14899
>gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170836 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tatacatatatgtatctcag 119 |||||||||||||||||||| Sbjct: 105394 tatacatatatgtatctcag 105413
>gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167675 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tatacatatatgtatctcag 119 |||||||||||||||||||| Sbjct: 151902 tatacatatatgtatctcag 151921
>gb|AC116563.4| Homo sapiens BAC clone RP11-714L20 from 4, complete sequence Length = 96961 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgtacaccaccttctccacc 438 |||||||||||||||||||| Sbjct: 1876 tgtacaccaccttctccacc 1895
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 gatgatgatgtccttcatccggtc 492 |||||||||||||||||| ||||| Sbjct: 3895366 gatgatgatgtccttcatgcggtc 3895343
>gb|AF358431.1| Senna alata isolate calchs2 root-specific chalcone synthase (chs) mRNA, complete cds Length = 1442 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 aagctccttggccttcgccc 181 |||||||||||||||||||| Sbjct: 496 aagctccttggccttcgccc 515
>gb|AC024270.6| Homo sapiens chromosome 15, clone RP11-382A20, complete sequence Length = 184113 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 caccttctccacctccaggg 445 |||||||||||||||||||| Sbjct: 127912 caccttctccacctccaggg 127893
>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence Length = 204323 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tcctgctcttcttcacaggg 159 |||||||||||||||||||| Sbjct: 94899 tcctgctcttcttcacaggg 94918
>gb|AF295365.1|AF295365 Mus musculus G-protein coupled receptor GPR90 mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 169 caccaccttctccacctcca 188
>gb|AC142278.2| Homo sapiens fosmid clone XXFOS-89292D11 from 4, complete sequence Length = 30394 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgtacaccaccttctccacc 438 |||||||||||||||||||| Sbjct: 30270 tgtacaccaccttctccacc 30289
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 449 tgatgttctccccgccgggagatgatgatgtccttc 484 |||||||||| |||||| | |||||||||||||||| Sbjct: 2381258 tgatgttctcgccgccgcg-gatgatgatgtccttc 2381224
>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete sequence Length = 317354 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tatacatatatgtatctcag 119 |||||||||||||||||||| Sbjct: 106269 tatacatatatgtatctcag 106250
>gb|AC133170.2| Mus musculus BAC clone RP24-267K11 from 3, complete sequence Length = 158692 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcctgctcttcttcacaggg 159 |||||||||||||||||||| Sbjct: 142303 tcctgctcttcttcacaggg 142284
>gb|AC004356.1|AC004356 Drosophila melanogaster DNA sequence (P1 DS01105 (D259)), complete sequence Length = 71343 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tatacatatatgtatctcag 119 |||||||||||||||||||| Sbjct: 49968 tatacatatatgtatctcag 49949
>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete sequence Length = 203949 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 caccaccttctccacctcca 442 |||||||||||||||||||| Sbjct: 160444 caccaccttctccacctcca 160425 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,212,873 Number of Sequences: 3902068 Number of extensions: 4212873 Number of successful extensions: 107916 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 107080 Number of HSP's gapped (non-prelim): 809 length of query: 521 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 498 effective length of database: 17,143,297,704 effective search space: 8537362256592 effective search space used: 8537362256592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
