>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence
          Length = 142374

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 12    cttgacatgtcatcaacaaagaaag 36
             |||||||||||||||| ||||||||
Sbjct: 28986 cttgacatgtcatcaagaaagaaag 29010

>gb|AC122683.4| Homo sapiens 3 RP11-528N21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 12     cttgacatgtcatcaacaaagaaag 36
              |||||||||||||||| ||||||||
Sbjct: 113116 cttgacatgtcatcaagaaagaaag 113140

>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   agggaggacgccgcccttgt 296
             ||||||||||||||||||||
Sbjct: 68891 agggaggacgccgcccttgt 68910

>ref|XM_470578.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 585

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 215 aaggcctggcagcacgaagagaaagcatctga 246
           |||| ||||||||| ||||| |||||||||||
Sbjct: 563 aagggctggcagcatgaagataaagcatctga 532

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 215     aaggcctggcagcacgaagagaaagcatctga 246
               |||| ||||||||| ||||| |||||||||||
Sbjct: 4880325 aagggctggcagcatgaagataaagcatctga 4880294

>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 215    aaggcctggcagcacgaagagaaagcatctga 246
              |||| ||||||||| ||||| |||||||||||
Sbjct: 115222 aagggctggcagcatgaagataaagcatctga 115253

>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence
          Length = 29688

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  gctaggtttcctgagcatat 161
            ||||||||||||||||||||
Sbjct: 4325 gctaggtttcctgagcatat 4344

>gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, complete sequence
          Length = 181412

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   ggggagagtgaaaggaggga 281
             ||||||||||||||||||||
Sbjct: 62097 ggggagagtgaaaggaggga 62116

>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence
          Length = 213637

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 261    gggggagagtgaaaggagggagga 284
              |||||||||||| |||||||||||
Sbjct: 140278 gggggagagtgagaggagggagga 140301

>gb|AC122169.24| Medicago truncatula clone mth2-9m5, complete sequence
          Length = 125652

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    aaaagcaaaatttacattac 130
              ||||||||||||||||||||
Sbjct: 113073 aaaagcaaaatttacattac 113054

>gb|AC162878.2| Mus musculus chromosome 7, clone RP24-316O13, complete sequence
          Length = 198612

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   ggggagagtgaaaggaggga 281
             ||||||||||||||||||||
Sbjct: 99842 ggggagagtgaaaggaggga 99861

>emb|BX470262.7| Zebrafish DNA sequence from clone CH211-120K20 in linkage group 14,
              complete sequence
          Length = 164673

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    acattatccaaaagcaaaat 121
              ||||||||||||||||||||
Sbjct: 128645 acattatccaaaagcaaaat 128664

>gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-61j12, complete sequence
          Length = 116517

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aaaagcaaaatttacattac 130
              ||||||||||||||||||||
Sbjct: 107002 aaaagcaaaatttacattac 107021

>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  agggaggacgccgcccttgt 296
            ||||||||||||||||||||
Sbjct: 7989 agggaggacgccgcccttgt 8008

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 215     aaggcctggcagcacgaagagaaagcatctga 246
               |||| ||||||||| ||||| |||||||||||
Sbjct: 4879540 aagggctggcagcatgaagataaagcatctga 4879509

>emb|AL772302.20| Mouse DNA sequence from clone RP23-450F9 on chromosome 4, complete
             sequence
          Length = 202175

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   ctaatgatgctgtctagtgc 196
             ||||||||||||||||||||
Sbjct: 70651 ctaatgatgctgtctagtgc 70670

>gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, complete sequence
          Length = 157793

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ggggggagagtgaaaggagggagg 283
             |||||||||| |||||||||||||
Sbjct: 94659 ggggggagagagaaaggagggagg 94682

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ggtgtgcgccatcgcggtct 350
              ||||||||||||||||||||
Sbjct: 162579 ggtgtgcgccatcgcggtct 162560

>emb|AJ131740.1|CLA131740 Cuphea lanceolata FatB3 gene
          Length = 4096

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 ttatccaaaagcaaaattta 124
           ||||||||||||||||||||
Sbjct: 949 ttatccaaaagcaaaattta 930

>gb|AY112385.1| Zea mays CL7234_1 mRNA sequence
          Length = 729

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 349 ctgctgcttgttcaacccctccatgatgcacnaga 383
           ||||||||| || | |||||||||||||||| |||
Sbjct: 450 ctgctgcttattgagcccctccatgatgcacgaga 416

>gb|AC136188.2| Homo sapiens 12 BAC RP11-633L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70901

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    aaaaagcaaacaatctaggttttc 100
             ||||||||||||||||||| ||||
Sbjct: 17883 aaaaagcaaacaatctaggctttc 17906

>gb|AC138302.3| Mus musculus BAC clone RP24-554C14 from 3, complete sequence
          Length = 152548

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   gggggagagtgaaaggagggagga 284
             |||||||||||| |||||||||||
Sbjct: 79923 gggggagagtgagaggagggagga 79900

>gb|AC145911.4| Gallus gallus BAC clone CH261-47H12 from chromosome unknown, complete
              sequence
          Length = 210020

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     aaaaagcaaacaatctaggt 96
              ||||||||||||||||||||
Sbjct: 133700 aaaaagcaaacaatctaggt 133719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,151,216
Number of Sequences: 3902068
Number of extensions: 3151216
Number of successful extensions: 59196
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59096
Number of HSP's gapped (non-prelim): 100
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)