>gb|BT009484.1| Triticum aestivum clone wr1.pk0046.b11:fis, full insert mRNA sequence
          Length = 1658

 Score =  121 bits (61), Expect = 8e-25
 Identities = 78/83 (93%), Gaps = 2/83 (2%)
 Strand = Plus / Minus

                                                                        
Query: 66   ggttaagttcagcaagtagcacgcctcacacaatcacatacattgattgggctaccatat 125
            ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||
Sbjct: 1540 ggttaagttcagcaagtaggacgcctcaca--atcacatacattgattgggctaccatat 1483

                                   
Query: 126  gctancactccaagaatcatgct 148
            |||| ||||| ||||||||||||
Sbjct: 1482 gctagcactcgaagaatcatgct 1460



 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 161  gctcgctcttacaacaccaatgata 185
            |||| ||||||||||||||||||||
Sbjct: 1459 gctcactcttacaacaccaatgata 1435



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 1    aacacacatacta-ttagtatttggtag 27
            ||||||||||||| ||||||||||||||
Sbjct: 1607 aacacacatactatttagtatttggtag 1580

>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence
          Length = 241834

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     cctcacacaatcacatacat 108
              ||||||||||||||||||||
Sbjct: 190448 cctcacacaatcacatacat 190429

>gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, complete sequence
          Length = 198670

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cactccaagaatcatgctaa 150
              ||||||||||||||||||||
Sbjct: 170768 cactccaagaatcatgctaa 170749

>emb|AJ843655.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 67_2
          Length = 1711

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843654.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 67_1
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843649.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 24_2
          Length = 1685

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 87  cctcacacaatcacatacat 106

>emb|AJ843643.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 13_2
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843642.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 13_1
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843637.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 111_2
          Length = 1711

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843636.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 111_1
          Length = 1692

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843633.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 109_2
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843632.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 109_1
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843631.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 108_2
          Length = 1691

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>emb|AJ843628.1| Populus tremula ga20ox1 gene for gibberellin 20-oxidase, exons 1-3,
           isolate 107_1
          Length = 1711

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  cctcacacaatcacatacat 108
           ||||||||||||||||||||
Sbjct: 89  cctcacacaatcacatacat 108

>gb|AC119206.13| Mus musculus chromosome 5, clone RP24-189M4, complete sequence
          Length = 168721

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ctcacacaatcacatacatt 109
              ||||||||||||||||||||
Sbjct: 138703 ctcacacaatcacatacatt 138684

>gb|AC140272.3| Mus musculus BAC clone RP23-332G6 from 8, complete sequence
          Length = 228667

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   cactccaagaatcatgctaa 150
             ||||||||||||||||||||
Sbjct: 19890 cactccaagaatcatgctaa 19871

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 70      aagttcagcaagtagcacg 88
               |||||||||||||||||||
Sbjct: 2963442 aagttcagcaagtagcacg 2963460

>gb|AY551215.1| Oryza sativa precursor microRNA 159c gene, complete sequence
          Length = 310

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   acacacatactattagtat 20
           |||||||||||||||||||
Sbjct: 170 acacacatactattagtat 152

>ref|XM_667204.1| Plasmodium berghei strain ANKA hypothetical protein (PB102858.00.0)
           partial mRNA
          Length = 789

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 140 aatcatgctaactataata 158
           |||||||||||||||||||
Sbjct: 40  aatcatgctaactataata 58

>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains
            the 5' end of the gene for the likely ortholog of H.
            sapiens target of myb1-like 2 (chicken) (TOM1L2)
            (A730055F12Rik), a glyceraldehyde-3-phosphate
            dehydrogenase (Gapd) pseudogene, the gene for a novel
            Leucine Rich Repeat domain-containing protein
            (4930449E07Rik), the Atpaf2 gene for ATP synthase
            mitochondrial F1 complex assembly factor 2, the gene for
            a novel protein (4933439F18Rik), an acid phosphatase 1
            soluble (Acp1) pseudogene, a ribosomal protein S4,
            X-linked (Rps4x) pseudogene, the Drg2 gene for
            developmentally regulated GTP binding protein 2, the 5'
            end of the Myo15 gene for myosin XV and four CpG islands,
            complete sequence
          Length = 207440

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 2    acacacatactattagtat 20
            |||||||||||||||||||
Sbjct: 4491 acacacatactattagtat 4473

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 2        acacacatactattagtat 20
                |||||||||||||||||||
Sbjct: 17678185 acacacatactattagtat 17678167

>gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone rp23-326m22, complete
             sequence
          Length = 227682

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     acacacatactattagtat 20
             |||||||||||||||||||
Sbjct: 11143 acacacatactattagtat 11161

>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0094H06
          Length = 147245

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     acacacatactattagtat 20
             |||||||||||||||||||
Sbjct: 59720 acacacatactattagtat 59702

>dbj|AK100209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P20, full
           insert sequence
          Length = 1639

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   acacacatactattagtat 20
           |||||||||||||||||||
Sbjct: 591 acacacatactattagtat 573

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 4       acacatactattagtattt 22
               |||||||||||||||||||
Sbjct: 2933146 acacatactattagtattt 2933164

>emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 in linkage group 18,
             complete sequence
          Length = 265632

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     acacatactattagtattt 22
             |||||||||||||||||||
Sbjct: 68483 acacatactattagtattt 68465

>emb|AL833799.8| Mouse DNA sequence from clone RP23-26L11 on chromosome 2, complete
              sequence
          Length = 208472

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     acaatcacatacattgatt 113
              |||||||||||||||||||
Sbjct: 165218 acaatcacatacattgatt 165200

>dbj|AP003115.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1000E4
          Length = 115937

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    tattagtatttggtagtagaaga 34
             |||||||||||||| ||||||||
Sbjct: 74721 tattagtatttggttgtagaaga 74743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,164,353
Number of Sequences: 3902068
Number of extensions: 1164353
Number of successful extensions: 81656
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81567
Number of HSP's gapped (non-prelim): 87
length of query: 185
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 163
effective length of database: 17,147,199,772
effective search space: 2794993562836
effective search space used: 2794993562836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)