ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags35f11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 268 bits (135), Expect = 2e-68 Identities = 288/339 (84%) Strand = Plus / Minus Query: 314 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 373 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2419 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2360 Query: 374 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 433 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2359 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2300 Query: 434 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 493 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2299 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2240 Query: 494 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 553 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2239 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2180 Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 ||||||| || || ||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 2179 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagattcacaccagtcat 2120 Query: 614 gatacattccaaacaagccacgctcataaacaatgggca 652 | ||||| |||||||||||||||||||||| |||||||| Sbjct: 2119 ggtacataccaaacaagccacgctcataaataatgggca 2081
>dbj|AK119636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F03, full insert sequence Length = 2826 Score = 268 bits (135), Expect = 2e-68 Identities = 288/339 (84%) Strand = Plus / Minus Query: 314 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 373 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2557 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2498 Query: 374 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 433 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2497 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2438 Query: 434 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 493 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2437 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2378 Query: 494 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 553 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2377 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2318 Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 ||||||| || || ||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 2317 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagattcacaccagtcat 2258 Query: 614 gatacattccaaacaagccacgctcataaacaatgggca 652 | ||||| |||||||||||||||||||||| |||||||| Sbjct: 2257 ggtacataccaaacaagccacgctcataaataatgggca 2219
>dbj|AK100713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115H24, full insert sequence Length = 2988 Score = 268 bits (135), Expect = 2e-68 Identities = 288/339 (84%) Strand = Plus / Minus Query: 314 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 373 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 2723 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 2664 Query: 374 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 433 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 2663 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 2604 Query: 434 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 493 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 2603 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 2544 Query: 494 ggtcaacctcagcaaacactcccaacaatttacatctctttttgagctttgaaaagagat 553 ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||||| Sbjct: 2543 tgtcgacctccgcaaacaccggcaacaatttgcatctcttttttagctttgagaagagat 2484 Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 ||||||| || || ||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 2483 ggtctgcatgcagaaggtcgtatgttctcgggtaagtgctgaaagattcacaccagtcat 2424 Query: 614 gatacattccaaacaagccacgctcataaacaatgggca 652 | ||||| |||||||||||||||||||||| |||||||| Sbjct: 2423 ggtacataccaaacaagccacgctcataaataatgggca 2385
>gb|AY596586.1| Saccharum officinarum clone SCCCRZ2002H08, complete sequence Length = 2841 Score = 266 bits (134), Expect = 8e-68 Identities = 280/329 (85%) Strand = Plus / Minus Query: 331 tccttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgtag 390 ||||||||||||||| | | ||||| ||||||||||| || || |||||| ||| |||| Sbjct: 2581 tccttgggccgccacatcgacttctcgacgcagagcaagccctcgttgcccttggtgtag 2522 Query: 391 gtcatgcgcacctcccactgcagggacttcgccatgccttcgagcgctcttattgtctcc 450 ||||| ||||||||||||||||||||||| ||||||| ||| || | ||||||| || Sbjct: 2521 gtcattcgcacctcccactgcagggacttggccatgctttccagttcatttattgtgtct 2462 Query: 451 gcgtcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctcagcaaac 510 || ||||| ||| |||||||| |||| ||||||||||| || |||||||| ||||| Sbjct: 2461 gcagtgtccctcacaatcagtttgccttgtggcctcaatacacgatcaacctcggcaaaa 2402 Query: 511 actcccaacaatttacatctctttttgagctttgaaaagagatggtctgcgtgtaggagg 570 ||| || |||||| |||||||||||||||||||| || |||||||| ||||| || ||| Sbjct: 2401 actgccgtcaatttgcatctctttttgagctttgagaatagatggtccgcgtgcagaagg 2342 Query: 571 tcatacgttctcgggtaagtgctgaaagattcgcaccagtcatgatacattccaaacaag 630 ||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 2341 tcatacgttcttgggtaagtgctgaaagactcgcaccagtcatggtacataccaaacaag 2282 Query: 631 ccacgctcataaacaatgggcantgtgtc 659 |||||||| |||| ||||||| |||||| Sbjct: 2281 ccacgctcgtaaatgatgggcagtgtgtc 2253
>gb|AY104480.1| Zea mays PCO099563 mRNA sequence Length = 2194 Score = 184 bits (93), Expect = 2e-43 Identities = 252/305 (82%) Strand = Plus / Minus Query: 334 ttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgtaggtc 393 |||||||||||| | | ||||| |||||||||||| || || ||||| ||| ||||||| Sbjct: 1883 ttgggccgccacatcgacttctcgacgcagagcaggccctcgctgcccttggtgtaggtc 1824 Query: 394 atgcgcacctcccactgcagggacttcgccatgccttcgagcgctcttattgtctccgcg 453 || |||||||||||||||| |||||| ||||||| || ||| | |||| || |||||| Sbjct: 1823 atccgcacctcccactgcacggacttggccatgctctccagctcatttatcgtgtccgcg 1764 Query: 454 tcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctcagcaaacact 513 ||||| ||||||||| || || | |||||||| || ||||| ||||| || || ||| Sbjct: 1763 gtgtccctcacgatcagcttgccctgtggcctcagtacacggtcgacctcggcgaaaact 1704 Query: 514 cccaacaatttacatctctttttgagctttgaaaagagatggtctgcgtgtaggaggtca 573 | || ||| ||||||||| |||||||||| || |||||||| ||||| || |||||| Sbjct: 1703 gcagccagtttgcatctctttctgagctttgagaacagatggtccgcgtgcagaaggtca 1644 Query: 574 tacgttctcgggtaagtgctgaaagattcgcaccagtcatgatacattccaaacaagcca 633 |||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||| || Sbjct: 1643 tacgttcttgggtaagtgctgaaagactcgcaccagtcatggtacatgccaaacaaaccg 1584 Query: 634 cgctc 638 ||||| Sbjct: 1583 cgctc 1579
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| |||||||| |||||||||||||| || || ||||| || |||||||||||| Sbjct: 38380349 ctcttttttagctttgagaagagatggtctgcatgcagaaggtcgtatgttctcgggtaa 38380408 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcataaacaatg 648 |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 38380409 gtgctgaaagattcacaccagtcatggtacataccaaacaagccacgctcataaataatg 38380468 Query: 649 ggca 652 |||| Sbjct: 38380469 ggca 38380472 Score = 113 bits (57), Expect = 8e-22 Identities = 177/217 (81%) Strand = Plus / Plus Query: 314 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 373 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 38379953 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 38380012 Query: 374 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 433 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 38380013 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 38380072 Query: 434 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 493 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 38380073 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 38380132 Query: 494 ggtcaacctcagcaaacactcccaacaatttacatct 530 ||| ||||| |||||||| ||||||||| ||||| Sbjct: 38380133 tgtcgacctccgcaaacaccggcaacaatttgcatct 38380169
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| |||||||| |||||||||||||| || || ||||| || |||||||||||| Sbjct: 141174 ctcttttttagctttgagaagagatggtctgcatgcagaaggtcgtatgttctcgggtaa 141233 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcataaacaatg 648 |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 141234 gtgctgaaagattcacaccagtcatggtacataccaaacaagccacgctcataaataatg 141293 Query: 649 ggca 652 |||| Sbjct: 141294 ggca 141297 Score = 113 bits (57), Expect = 8e-22 Identities = 177/217 (81%) Strand = Plus / Plus Query: 314 acatgcttgcttcgatctccttgggccgccacgtggtcttctggacgcagagcagccctt 373 |||||||||| ||||||||||||||||||||| ||| ||| ||||| || || || || | Sbjct: 140778 acatgcttgcctcgatctccttgggccgccacatggacttttggacacatagaagaccct 140837 Query: 374 ccttgcccgtggcgtaggtcatgcgcacctcccactgcagggacttcgccatgccttcga 433 | || ||| ||| |||||||||||| ||||||||||| || ||||| ||||||||| | Sbjct: 140838 cgttacccttggtgtaggtcatgcgaacctcccactgaagcgactttaccatgccttgca 140897 Query: 434 gcgctcttattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaatatcc 493 | | |||||||||| || | |||| ||| ||||| || ||||||||||||||||| | Sbjct: 140898 gttcgtttattgtctctgcattatccctcacaatcagctttccttctggcctcaatattc 140957 Query: 494 ggtcaacctcagcaaacactcccaacaatttacatct 530 ||| ||||| |||||||| ||||||||| ||||| Sbjct: 140958 tgtcgacctccgcaaacaccggcaacaatttgcatct 140994
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || ||||||||||| ||||| |||||||| || | || ||||| |||||| Sbjct: 3969712 ttgagcttggagaagagatggtcggcgtggaggaggtcgtatgatcgagggtaggtgctg 3969653 Query: 595 aaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 || || ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 3969652 aaggactcgcaccagtcgtggtacatgccaaacagccctcgctcata 3969606 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || |||| |||||| ||||| |||||||| || | ||| ||||| |||||| Sbjct: 3980083 ttgagcttggagaagaaatggtcggcgtggaggaggtcgtatgatctagggtaggtgctg 3980024 Query: 595 aaagattcgcaccagtcatgatacat 620 || || |||||||||||||| ||||| Sbjct: 3980023 aaggactcgcaccagtcatggtacat 3979998 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 331 tccttgggccgccacgtggtcttctggacgcagagca 367 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 3970088 tccttgggccgccacatcgtcttctcggcgcagagca 3970052 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 455 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 503 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 3969964 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 3969916
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || ||||||||||| ||||| |||||||| || | || ||||| |||||| Sbjct: 3969686 ttgagcttggagaagagatggtcggcgtggaggaggtcgtatgatcgagggtaggtgctg 3969627 Query: 595 aaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 || || ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 3969626 aaggactcgcaccagtcgtggtacatgccaaacagccctcgctcata 3969580 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || |||| |||||| ||||| |||||||| || | ||| ||||| |||||| Sbjct: 3980059 ttgagcttggagaagaaatggtcggcgtggaggaggtcgtatgatctagggtaggtgctg 3980000 Query: 595 aaagattcgcaccagtcatgatacat 620 || || |||||||||||||| ||||| Sbjct: 3979999 aaggactcgcaccagtcatggtacat 3979974 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 331 tccttgggccgccacgtggtcttctggacgcagagca 367 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 3970062 tccttgggccgccacatcgtcttctcggcgcagagca 3970026 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 455 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 503 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 3969938 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 3969890
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || ||||||||||| ||||| |||||||| || | || ||||| |||||| Sbjct: 6122 ttgagcttggagaagagatggtcggcgtggaggaggtcgtatgatcgagggtaggtgctg 6063 Query: 595 aaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 || || ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 6062 aaggactcgcaccagtcgtggtacatgccaaacagccctcgctcata 6016 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || |||| |||||| ||||| |||||||| || | ||| ||||| |||||| Sbjct: 16493 ttgagcttggagaagaaatggtcggcgtggaggaggtcgtatgatctagggtaggtgctg 16434 Query: 595 aaagattcgcaccagtcatgatacat 620 || || |||||||||||||| ||||| Sbjct: 16433 aaggactcgcaccagtcatggtacat 16408 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 331 tccttgggccgccacgtggtcttctggacgcagagca 367 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 6498 tccttgggccgccacatcgtcttctcggcgcagagca 6462 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 455 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 503 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 6374 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 6326
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || ||||||||||| ||||| |||||||| || | || ||||| |||||| Sbjct: 131688 ttgagcttggagaagagatggtcggcgtggaggaggtcgtatgatcgagggtaggtgctg 131629 Query: 595 aaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 || || ||||||||||| || ||||| ||||||| || |||||||| Sbjct: 131628 aaggactcgcaccagtcgtggtacatgccaaacagccctcgctcata 131582 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || |||| |||||| ||||| |||||||| || | ||| ||||| |||||| Sbjct: 142059 ttgagcttggagaagaaatggtcggcgtggaggaggtcgtatgatctagggtaggtgctg 142000 Query: 595 aaagattcgcaccagtcatgatacat 620 || || |||||||||||||| ||||| Sbjct: 141999 aaggactcgcaccagtcatggtacat 141974 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 331 tccttgggccgccacgtggtcttctggacgcagagca 367 ||||||||||||||| | ||||||| | ||||||||| Sbjct: 132064 tccttgggccgccacatcgtcttctcggcgcagagca 132028 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 455 cgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 503 |||||||||||||||| ||||| || |||| || |||||||| ||||| Sbjct: 131940 cgtcccgcacgatcagcttcccctccggccgcaggatccggtccacctc 131892
>ref|NM_001036032.1| Arabidopsis thaliana unknown protein AT1G29470 transcript variant AT1G29470.2 mRNA, complete cds Length = 2595 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccag 609 ||||| || ||||| |||||||| || || | |||||||||||||| ||||| ||||| Sbjct: 2166 agatgatcagcgtgaaggaggtcgtaagtccgagggtaagtgctgaatgattcacaccaa 2107 Query: 610 tcatgatacattccaaacaagccacg 635 |||||||| ||||||||||| ||||| Sbjct: 2106 tcatgatagattccaaacaaaccacg 2081
>ref|NM_102687.2| Arabidopsis thaliana unknown protein AT1G29470 transcript variant AT1G29470.1 mRNA, complete cds Length = 2639 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccag 609 ||||| || ||||| |||||||| || || | |||||||||||||| ||||| ||||| Sbjct: 2210 agatgatcagcgtgaaggaggtcgtaagtccgagggtaagtgctgaatgattcacaccaa 2151 Query: 610 tcatgatacattccaaacaagccacg 635 |||||||| ||||||||||| ||||| Sbjct: 2150 tcatgatagattccaaacaaaccacg 2125
>gb|BT010751.1| Arabidopsis thaliana At1g29470 gene, complete cds Length = 2313 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccag 609 ||||| || ||||| |||||||| || || | |||||||||||||| ||||| ||||| Sbjct: 2063 agatgatcagcgtgaaggaggtcgtaagtccgagggtaagtgctgaatgattcacaccaa 2004 Query: 610 tcatgatacattccaaacaagccacg 635 |||||||| ||||||||||| ||||| Sbjct: 2003 tcatgatagattccaaacaaaccacg 1978
>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete sequence Length = 130653 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccag 609 ||||| || ||||| |||||||| || || | |||||||||||||| ||||| ||||| Sbjct: 53191 agatgatcagcgtgaaggaggtcgtaagtccgagggtaagtgctgaatgattcacaccaa 53250 Query: 610 tcatgatacattccaaacaagccacg 635 |||||||| ||||||||||| ||||| Sbjct: 53251 tcatgatagattccaaacaaaccacg 53276
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 534 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 593 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 148181 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 148122 Query: 594 gaaagattcgcaccagtcatg 614 ||| || || ||||||||||| Sbjct: 148121 gaatgactcacaccagtcatg 148101
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 534 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 593 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 18034 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 17975 Query: 594 gaaagattcgcaccagtcatg 614 ||| || || ||||||||||| Sbjct: 17974 gaatgactcacaccagtcatg 17954
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 534 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 593 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 4366671 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 4366612 Query: 594 gaaagattcgcaccagtcatg 614 ||| || || ||||||||||| Sbjct: 4366611 gaatgactcacaccagtcatg 4366591
>dbj|AK109545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E05, full insert sequence Length = 3015 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 534 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 593 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 2589 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 2530 Query: 594 gaaagattcgcaccagtcatg 614 ||| || || ||||||||||| Sbjct: 2529 gaatgactcacaccagtcatg 2509
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 534 tttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgct 593 ||||||||| || ||||||||||| || || |||||||| || | ||||||||| ||||| Sbjct: 4375365 tttgagcttggagaagagatggtcggcatggaggaggtcgtaggatctcgggtaggtgct 4375306 Query: 594 gaaagattcgcaccagtcatg 614 ||| || || ||||||||||| Sbjct: 4375305 gaatgactcacaccagtcatg 4375285
>ref|NM_125799.2| Arabidopsis thaliana unknown protein AT5G64030 mRNA, complete cds Length = 3031 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcacca 608 |||||||| ||||| ||||| ||||| | ||||||||| || ||||||||||||||||| Sbjct: 2563 agatggtcggcgtgaaggagatcatatgatctcgggtatgtactgaaagattcgcacca 2505 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 441 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 488 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2672 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2625
>emb|CT009521.5| M.truncatula DNA sequence from clone MTH2-81E13 on chromosome 3, complete sequence Length = 56728 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 329 tctccttgggccgccacgtggtcttctggacgcagagcagcccttccttgcccgtggcgt 388 ||||||| |||||||| |||| ||||||||| || | || || ||||| || ||| || Sbjct: 16453 tctccttaggccgccaggtggacttctggacacataacaaaccctccttatccttggagt 16394 Query: 389 aggtcatgcgcacctcccactgcagggactt 419 |||||||||| ||||||||||||| |||||| Sbjct: 16393 aggtcatgcgaacctcccactgcatggactt 16363 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 544 gaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcg 603 ||||||||||| ||||| || ||||| |||||||| || || || ||||| || ||||| Sbjct: 16153 gaaaagagatgatctgcatggaggagatcatacgtcctgggataggtgctaaatgattca 16094 Query: 604 caccagtcatgatacattccaaa 626 ||||| |||||||| || ||||| Sbjct: 16093 caccaatcatgatatataccaaa 16071
>gb|AY125524.1| Arabidopsis thaliana AT5g64030/MBM17_13 mRNA, complete cds Length = 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcacca 608 |||||||| ||||| ||||| ||||| | ||||||||| || ||||||||||||||||| Sbjct: 2401 agatggtcggcgtgaaggagatcatatgatctcgggtatgtactgaaagattcgcacca 2343 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 441 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 488 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2510 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2463
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 |||| ||||| |||||||| || || |||||||| |||||||| || ||||||||||||| Sbjct: 29670325 ggtcggcgtgcaggaggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcat 29670266 Query: 614 gatacat 620 | ||||| Sbjct: 29670265 ggtacat 29670259
>gb|BT003013.1| Arabidopsis thaliana At5g64030/MBM17_13 gene, complete cds Length = 2490 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcacca 608 |||||||| ||||| ||||| ||||| | ||||||||| || ||||||||||||||||| Sbjct: 2240 agatggtcggcgtgaaggagatcatatgatctcgggtatgtactgaaagattcgcacca 2182 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 441 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 488 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 2349 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 2302
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 |||| ||||| |||||||| || || |||||||| |||||||| || ||||||||||||| Sbjct: 43439 ggtcggcgtgcaggaggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcat 43380 Query: 614 gatacat 620 | ||||| Sbjct: 43379 ggtacat 43373
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 554 ggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcat 613 |||| ||||| |||||||| || || |||||||| |||||||| || ||||||||||||| Sbjct: 113910 ggtcggcgtgcaggaggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcat 113851 Query: 614 gatacat 620 | ||||| Sbjct: 113850 ggtacat 113844
>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24 Length = 48622 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaagattcgcacca 608 |||||||| ||||| ||||| ||||| | ||||||||| || ||||||||||||||||| Sbjct: 1339 agatggtcggcgtgaaggagatcatatgatctcgggtatgtactgaaagattcgcacca 1281 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 441 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 488 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 1522 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 1475
>gb|AY111833.1| Zea mays CL40255_1 mRNA sequence Length = 795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 583 gggtaagtgctgaaagattcgcaccagtcatgata 617 ||||| ||||||||||||||||||||||||||||| Sbjct: 565 gggtaggtgctgaaagattcgcaccagtcatgata 599
>ref|NM_128981.2| Arabidopsis thaliana unknown protein AT2G34300 transcript variant AT2G34300.1 mRNA, complete cds Length = 2666 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 568 aggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcatgatacattccaaac 627 ||||| || ||||| || |||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 2190 aggtcgtaagttctgggataagtgttgaatgattcacaccagtcatgatagattccaaat 2131 Query: 628 aagccacgctcata 641 || ||||| ||||| Sbjct: 2130 aaaccacgttcata 2117
>ref|NM_001036400.1| Arabidopsis thaliana unknown protein AT2G34300 transcript variant AT2G34300.2 mRNA, complete cds Length = 2641 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 568 aggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcatgatacattccaaac 627 ||||| || ||||| || |||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 2122 aggtcgtaagttctgggataagtgttgaatgattcacaccagtcatgatagattccaaat 2063 Query: 628 aagccacgctcata 641 || ||||| ||||| Sbjct: 2062 aaaccacgttcata 2049
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 568 aggtcatacgttctcgggtaagtgctgaaagattcgcaccagtcatgatacattccaaac 627 ||||| || ||||| || |||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 44770 aggtcgtaagttctgggataagtgttgaatgattcacaccagtcatgatagattccaaat 44829 Query: 628 aagccacgctcata 641 || ||||| ||||| Sbjct: 44830 aaaccacgttcata 44843
>ref|XM_474482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2163 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| | ||| || || ||||||| ||||| || || ||||| ||||| ||||| Sbjct: 1811 ctctttttaatcttggagaaaagatggttcgcgtgcagaagatcataggttctggggtag 1752 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 ||||| || || || ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1751 gtgctaaatgactcacaccaatcatggtagattccaaacaacccacgctcata 1699
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| | ||| || || ||||||| ||||| || || ||||| ||||| ||||| Sbjct: 98248 ctctttttaatcttggagaaaagatggttcgcgtgcagaagatcataggttctggggtag 98189 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 ||||| || || || ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 98188 gtgctaaatgactcacaccaatcatggtagattccaaacaacccacgctcata 98136
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| | ||| || || ||||||| ||||| || || ||||| ||||| ||||| Sbjct: 35473445 ctctttttaatcttggagaaaagatggttcgcgtgcagaagatcataggttctggggtag 35473386 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 ||||| || || || ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 35473385 gtgctaaatgactcacaccaatcatggtagattccaaacaacccacgctcata 35473333
>dbj|AK070717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L06, full insert sequence Length = 2475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||||||| | ||| || || ||||||| ||||| || || ||||| ||||| ||||| Sbjct: 2021 ctctttttaatcttggagaaaagatggttcgcgtgcagaagatcataggttctggggtag 1962 Query: 589 gtgctgaaagattcgcaccagtcatgatacattccaaacaagccacgctcata 641 ||||| || || || ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1961 gtgctaaatgactcacaccaatcatggtagattccaaacaacccacgctcata 1909
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 535 ttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctg 594 |||||||| || ||||| ||||| || || |||||||| || | |||||||| |||||| Sbjct: 95013 ttgagcttggagaagaggtggtcggcatggaggaggtcgtaggacctcgggtaggtgctg 94954 Query: 595 aaagattcgcaccagtcatg 614 || || |||||||||||||| Sbjct: 94953 aaggactcgcaccagtcatg 94934 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 453 gtcgtcccgcacgatcagtttcccttctggcctcaatatccggtcaacctc 503 |||||||||||||||||| ||||| | ||||||| |||||||| ||||| Sbjct: 95194 gtcgtcccgcacgatcagcttcccgttcggcctcaggatccggtccacctc 95144 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 325 tcgatctccttgggccgccacgtggtcttc 354 ||||||||| ||||||||||||| |||||| Sbjct: 95322 tcgatctccgtgggccgccacgtcgtcttc 95293
>ref|NM_114967.1| Arabidopsis thaliana unknown protein AT3G51070 mRNA, complete cds Length = 2688 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 540 ctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaaga 599 |||||| || ||||| ||||| |||| ||| ||||| ||| ||||| ||||| || || Sbjct: 2469 ctttgagaaaagatgatctgcatgtaagagatcatagcttcgagggtatgtgctaaatga 2410 Query: 600 ttcgcaccagtcatgatacattcc 623 ||| |||||||||||||| ||||| Sbjct: 2409 ttcacaccagtcatgatatattcc 2386
>ref|NM_106474.4| Arabidopsis thaliana unknown protein AT1G78240 mRNA, complete cds Length = 2760 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 547 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 590 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2175 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2132
>gb|AF360139.1| Arabidopsis thaliana At1g78240 mRNA sequence Length = 2832 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 547 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 590 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2239 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2196
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 540 ctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaagtgctgaaaga 599 |||||| || ||||| ||||| |||| ||| ||||| ||| ||||| ||||| || || Sbjct: 31316 ctttgagaaaagatgatctgcatgtaagagatcatagcttcgagggtatgtgctaaatga 31257 Query: 600 ttcgcaccagtcatgatacattcc 623 ||| |||||||||||||| ||||| Sbjct: 31256 ttcacaccagtcatgatatattcc 31233
>emb|BX814932.1|CNS0ADZ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2709 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 547 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 590 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 2172 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 2129
>gb|AC012680.5|AC012680 Arabidopsis thaliana chromosome 1 BAC T11I11 genomic sequence, complete sequence Length = 69506 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 547 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 590 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 68256 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 68299
>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I, complete sequence Length = 95769 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 547 aagagatggtctgcgtgtaggaggtcatacgttctcgggtaagt 590 ||||||| |||||| |||| |||||||| |||||||||||||| Sbjct: 92942 aagagattgtctgcatgtaccaggtcatatgttctcgggtaagt 92899
>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence Length = 209896 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 121 cattacattcattttacaacaaatgt 146 |||| ||||||||||||||||||||| Sbjct: 176545 catttcattcattttacaacaaatgt 176520
>gb|AC108675.3| Homo sapiens 3 BAC RP11-760N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188894 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 151 caggcaaaagaaagaatgaaag 172 |||||||||||||||||||||| Sbjct: 68368 caggcaaaagaaagaatgaaag 68347
>dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34A19, TM0249, complete sequence Length = 111706 Score = 44.1 bits (22), Expect = 0.58 Identities = 70/86 (81%) Strand = Plus / Minus Query: 529 ctctttttgagctttgaaaagagatggtctgcgtgtaggaggtcatacgttctcgggtaa 588 |||| ||| ||||||||||| |||| ||||| || || || ||||| ||||| || || Sbjct: 38782 ctctcttttagctttgaaaaaagattatctgcatgcagtagatcataagttcttggatat 38723 Query: 589 gtgctgaaagattcgcaccagtcatg 614 |||||||| ||||| ||||| ||||| Sbjct: 38722 gtgctgaaggattcacaccaatcatg 38697
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 40255 cgcagagcagcccttccttgc 40235
>emb|CR940310.6| M.truncatula DNA sequence from clone MTH2-5D8 on chromosome 3, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 gaaaaacacatacatgattctacag 200 ||||||||||| ||||||||||||| Sbjct: 37638 gaaaaacacattcatgattctacag 37614
>emb|AL591292.1| Human DNA sequence from clone RP11-99J16 on chromosome 1 Contains the 3' end of the TTC13 gene for tetratricopeptide repeat domain 13, complete sequence Length = 57697 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 cctcagcaaacactcccaaca 520 ||||||||||||||||||||| Sbjct: 45983 cctcagcaaacactcccaaca 46003
>emb|X89383.1|RNSNF1KIN R.norvegicus mRNA for SNF1-related kinase Length = 3004 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2355 cgcagagcagcccttccttgc 2335
>gb|AF387809.2| Mus musculus strain BALB/c SNF-1 related kinase (Snrk) mRNA, complete cds Length = 4708 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2360 cgcagagcagcccttccttgc 2340
>tpg|BK001429.1| TPA: TPA_exp: Homo sapiens NOELIN3 (OLFM3) gene, complete cds; alternatively spliced Length = 195421 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 tctctttttgagctttgaaaa 548 ||||||||||||||||||||| Sbjct: 57518 tctctttttgagctttgaaaa 57498
>dbj|AK053203.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030034B15 product:SNF-1 RELATED KINASE homolog [Mus musculus], full insert sequence Length = 1992 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 1315 cgcagagcagcccttccttgc 1295
>gb|BC094658.1| Mus musculus SNF related kinase, mRNA (cDNA clone MGC:101984 IMAGE:5721174), complete cds Length = 4740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2388 cgcagagcagcccttccttgc 2368
>ref|NM_138833.1| Rattus norvegicus SNF related kinase (Snrk), mRNA Length = 3004 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2355 cgcagagcagcccttccttgc 2335
>ref|XM_579653.1| PREDICTED: Rattus norvegicus hypothetical LOC367880 (LOC367880), mRNA Length = 2806 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2160 cgcagagcagcccttccttgc 2140
>ref|XM_579652.1| PREDICTED: Rattus norvegicus SNF related kinase (Snrk), mRNA Length = 2270 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 1621 cgcagagcagcccttccttgc 1601
>dbj|AK211321.1| Mus musculus cDNA, clone:Y2G0121F20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063498, based on BLAT search Length = 400 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 99 cgcagagcagcccttccttgc 79
>gb|DQ020487.1| Sus scrofa clone BAC KNP_375G9, complete sequence Length = 142071 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 caacctcagcaaacactccca 517 ||||||||||||||||||||| Sbjct: 122796 caacctcagcaaacactccca 122816
>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full insert sequence Length = 2371 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 571 tcatacgttctcgggtaagtgctgaaagattcgcaccagtc 611 ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 1825 tcatacgttcttgggtaagtagagaaagcttcgcaccagtc 1785
>gb|BC020189.1| Mus musculus SNF related kinase, mRNA (cDNA clone MGC:28970 IMAGE:4482701), complete cds Length = 3101 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2402 cgcagagcagcccttccttgc 2382
>ref|NM_133741.1| Mus musculus SNF related kinase (Snrk), mRNA Length = 4708 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 2360 cgcagagcagcccttccttgc 2340
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence Length = 206641 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 cgcagagcagcccttccttgc 379 ||||||||||||||||||||| Sbjct: 184055 cgcagagcagcccttccttgc 184035
>emb|AL356280.21| Human DNA sequence from clone RP11-82O2 on chromosome 1 Contains the 5' end of the OLFM3 gene for olfactomedin 3 and a DNAJ family pseudogene, complete sequence Length = 173251 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 528 tctctttttgagctttgaaaa 548 ||||||||||||||||||||| Sbjct: 94004 tctctttttgagctttgaaaa 94024
>ref|NM_016073.2| Homo sapiens hepatoma-derived growth factor, related protein 3 (HDGFRP3), mRNA Length = 1973 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 557 aggcaaaagaaagaatgaaa 576
>gb|AC104930.9| Mus musculus chromosome 7, clone RP24-224C21, complete sequence Length = 156052 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 ggtcttctggacgcagagcagccc 371 |||||||||||| ||||||||||| Sbjct: 34857 ggtcttctggacacagagcagccc 34880
>gb|BC055734.1| Mus musculus hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:66996 IMAGE:6810355), complete cds Length = 2888 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 423 aggcaaaagaaagaatgaaa 442
>gb|BC015483.1| Homo sapiens hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:8892 IMAGE:3913558), complete cds Length = 1817 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 500 aggcaaaagaaagaatgaaa 519
>ref|NM_013886.4| Mus musculus hepatoma-derived growth factor, related protein 3 (Hdgfrp3), mRNA Length = 5868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 836 aggcaaaagaaagaatgaaa 855
>gb|BT014452.1| Lycopersicon esculentum clone 133778R, mRNA sequence Length = 2259 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 aggtcatacgttctcgggta 587 |||||||||||||||||||| Sbjct: 1645 aggtcatacgttctcgggta 1626
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 160024 aggcaaaagaaagaatgaaa 160043
>ref|XM_993959.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1 (Golgb1), mRNA Length = 10907 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 475 cttctggaggcagagcagcccctccttg 448
>ref|XM_001001861.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 9 (Golgb1), mRNA Length = 13115 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 2770 cttctggaggcagagcagcccctccttg 2743
>ref|XM_916950.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 7 (Golgb1), mRNA Length = 10927 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 582 cttctggaggcagagcagcccctccttg 555
>ref|XM_901689.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 4 (Golgb1), mRNA Length = 11008 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 576 cttctggaggcagagcagcccctccttg 549
>ref|XM_148244.7| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 1 (Golgb1), mRNA Length = 11104 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 672 cttctggaggcagagcagcccctccttg 645
>ref|XM_901694.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 6 (Golgb1), mRNA Length = 10907 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 475 cttctggaggcagagcagcccctccttg 448
>emb|CR382370.13| Zebrafish DNA sequence from clone DKEY-22O12 in linkage group 1, complete sequence Length = 257504 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 229746 ttacagtacagcattacatt 229765
>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5, complete sequence Length = 158289 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 45457 ttacagtacagcattacatt 45438
>ref|XM_536208.2| PREDICTED: Canis familiaris similar to Hepatoma-derived growth factor-related protein 3 (HRP-3) (Hepatoma-derived growth factor 2) (LOC479059), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 414 aggcaaaagaaagaatgaaa 433
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 56374 aggcaaaagaaagaatgaaa 56393
>emb|AL009029.1|HS164C20 Human DNA sequence from clone RP1-164C20 on chromosome 6q16.1-22.1, complete sequence Length = 161475 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 caggcaaaagaaagaatgaaaggc 174 |||||||||||||||| ||||||| Sbjct: 23747 caggcaaaagaaagaaagaaaggc 23770
>gb|BC040554.1| Homo sapiens hepatoma-derived growth factor, related protein 3, mRNA (cDNA clone MGC:39836 IMAGE:5303793), complete cds Length = 2327 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 1009 aggcaaaagaaagaatgaaa 1028
>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 121961 ttacagtacagcattacatt 121980
>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25, complete sequence Length = 204383 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 123959 ttacagtacagcattacatt 123940
>emb|BX649627.10| Zebrafish DNA sequence from clone DKEY-78B7 in linkage group 3, complete sequence Length = 92147 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 80765 ttacagtacagcattacatt 80746
>emb|BX511176.6| Zebrafish DNA sequence from clone CH211-8C17 in linkage group 3, complete sequence Length = 116813 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 103428 ttacagtacagcattacatt 103409
>gb|AC154763.2| Mus musculus BAC clone RP24-422J16 from chromosome 16, complete sequence Length = 156818 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 21425 cttctggaggcagagcagcccctccttg 21398
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 caatgcatttgcctttttta 225 |||||||||||||||||||| Sbjct: 163844 caatgcatttgcctttttta 163863
>emb|BX000435.21| Zebrafish DNA sequence from clone DKEY-12L8 in linkage group 1, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 153044 ttacagtacagcattacatt 153025
>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence Length = 110184 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gcacctcccactgcagggac 417 |||||||||||||||||||| Sbjct: 32046 gcacctcccactgcagggac 32027
>gb|AC150559.31| Medicago truncatula clone mth2-67j8, complete sequence Length = 107641 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 ccttttttagcatcaacaagaatc 240 ||||||| |||||||||||||||| Sbjct: 97690 cctttttcagcatcaacaagaatc 97667
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 caatgcatttgcctttttta 225 |||||||||||||||||||| Sbjct: 27275 caatgcatttgcctttttta 27294
>emb|CR611705.1| full-length cDNA clone CS0DB006YI07 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1809 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 519 aggcaaaagaaagaatgaaa 538
>emb|CR598906.1| full-length cDNA clone CS0DB006YG12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1526 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 507 aggcaaaagaaagaatgaaa 526
>dbj|AK001280.1| Homo sapiens cDNA FLJ10418 fis, clone NT2RP1000130, moderately similar to HEPATOMA-DERIVED GROWTH FACTOR Length = 1973 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 557 aggcaaaagaaagaatgaaa 576
>emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 in linkage group 14, complete sequence Length = 214178 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 145384 ttacagtacagcattacatt 145403
>gb|AF110642.1| Homo sapiens hepatoma-derived growth factor 2 (HDGF2) mRNA, complete cds Length = 1423 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 526 aggcaaaagaaagaatgaaa 545
>gb|AC024270.6| Homo sapiens chromosome 15, clone RP11-382A20, complete sequence Length = 184113 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 139855 aggcaaaagaaagaatgaaa 139836
>dbj|AK162418.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330209E08 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 4731 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 479 aggcaaaagaaagaatgaaa 498
>dbj|AK155415.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630225N06 product:hypothetical protein, full insert sequence Length = 1881 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 1828 cttctggaggcagagcagcccctccttg 1801
>dbj|AK162967.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330105L04 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 2320 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 400 aggcaaaagaaagaatgaaa 419
>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence Length = 187418 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 ggtcttctggacgcagagcagccc 371 |||||||||||| ||||||||||| Sbjct: 32367 ggtcttctggacacagagcagccc 32344
>dbj|AK020091.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330407A06 product:similar to GIANTIN (GOLGI COMPLEX-ASSOCIATED PROTEIN OF 364 KDA) (GCP364) [Rattus norvegicus], full insert sequence Length = 507 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 351 cttctggacgcagagcagcccttccttg 378 |||||||| |||||||||||| |||||| Sbjct: 454 cttctggaggcagagcagcccctccttg 427
>dbj|AK051401.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130046F04 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 758 aggcaaaagaaagaatgaaa 777
>dbj|AK019487.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632410H03 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 2722 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 499 aggcaaaagaaagaatgaaa 518
>dbj|AK045542.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230209J06 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 3363 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 836 aggcaaaagaaagaatgaaa 855
>dbj|AK044858.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130008G01 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 1868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 661 aggcaaaagaaagaatgaaa 680
>dbj|AK014849.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921509B08 product:hepatoma-derived growth factor, related protein 3, full insert sequence Length = 1526 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 660 aggcaaaagaaagaatgaaa 679
>emb|BX833001.1|CNS0A1QZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 439 Score = 40.1 bits (20), Expect = 9.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 441 tattgtctccgcgtcgtcccgcacgatcagtttcccttctggcctcaa 488 |||||| ||||| ||||| || || |||||||||||||| || ||||| Sbjct: 90 tattgtttccgcatcgtctcgaactatcagtttcccttccggtctcaa 43
>gb|AF151900.1|AF151900 Homo sapiens CGI-142 protein mRNA, complete cds Length = 1830 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 526 aggcaaaagaaagaatgaaa 545
>gb|AC008394.3|AC008394 Homo sapiens chromosome 5 clone CTC_242N15, complete sequence Length = 171545 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ttctacagctgcacaatgcatttg 216 |||||||||||||||||| ||||| Sbjct: 157682 ttctacagctgcacaatgtatttg 157659
>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7, complete sequence Length = 199752 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 ttttagcatcaacaagaatcatgt 244 |||| ||||||||||||||||||| Sbjct: 47092 ttttggcatcaacaagaatcatgt 47115
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 78769 aggcaaaagaaagaatgaaa 78750
>dbj|AK111175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F01, full insert sequence Length = 3120 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 agatggtctgcgtgtaggag 569 |||||||||||||||||||| Sbjct: 693 agatggtctgcgtgtaggag 674
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 attacattcattttacaacaaatg 145 |||||||||||||||||| ||||| Sbjct: 381838 attacattcattttacaagaaatg 381861
>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19, complete sequence Length = 166128 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 90961 ttacagtacagcattacatt 90942
>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence Length = 187201 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 39594 ttacagtacagcattacatt 39613
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 aggtcatgcgcacctcccac 408 |||||||||||||||||||| Sbjct: 2645279 aggtcatgcgcacctcccac 2645298
>emb|CR762424.33| Zebrafish DNA sequence from clone RP71-52E8 in linkage group 22, complete sequence Length = 178229 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttacagtacagcattacatt 129 |||||||||||||||||||| Sbjct: 16976 ttacagtacagcattacatt 16995
>dbj|AB029493.1| Mus musculus mRNA for hepatoma-derived growth factor-related protein HRP-3, complete cds Length = 612 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 399 aggcaaaagaaagaatgaaa 418
>dbj|AB029156.1| Homo sapiens HRP-3 mRNA, complete cds Length = 1427 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aggcaaaagaaagaatgaaa 171 |||||||||||||||||||| Sbjct: 522 aggcaaaagaaagaatgaaa 541 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,804,179 Number of Sequences: 3902068 Number of extensions: 5804179 Number of successful extensions: 119593 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119077 Number of HSP's gapped (non-prelim): 510 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
